BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474799
Length=1401
Score E
Sequences producing significant alignments: (Bits) Value
AT1G56360.1 | Symbols: PAP6, ATPAP6 | purple acid phosphatase 6... 2102 0.0
AT4G36350.1 | Symbols: ATPAP25, PAP25 | purple acid phosphatase... 1317 0.0
> AT1G56360.1 | Symbols: PAP6, ATPAP6 | purple acid phosphatase
6 | chr1:21098603-21100842 REVERSE LENGTH=1401
Length=1401
Score = 2102 bits (1138), Expect = 0.0
Identities = 1312/1398 (94%), Gaps = 4/1398 (0%)
Strand=Plus/Plus
Query 1 ATGAAGAATCTTGTTATATTCGTCTTCTTGTTCTTAAGCATCACTACTGTGATCAATGGT 60
||||||||||| || ||||| | ||||||||||||||||||||||||||| |||||||||
Sbjct 1 ATGAAGAATCTGGTCATATTTGCCTTCTTGTTCTTAAGCATCACTACTGTAATCAATGGT 60
Query 61 GGAATAACAAGTGAATTTGTCCGCCAAGCTTTACCATCGATTGAGATGTCTCTCGATACT 120
|||||||||||| |||||||||||||||||||||||||||| || ||||||||||| |||
Sbjct 61 GGAATAACAAGTAAATTTGTCCGCCAAGCTTTACCATCGATCGAAATGTCTCTCGACACT 120
Query 121 TTCCCTTCTCCTGATGGCTACAACACTCCTGAACAGGTTCATCTGACTCAAGGAGACCAT 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 TTCCCTTCTCCTGGTGGCTACAACACTCCTGAACAGGTTCATCTGACTCAAGGAGACCAT 180
Query 181 GATGGGCATGGCATGATTGTTTCGTGGGTCACGCCGTTAAACCTCGCTGGTTCTAACATT 240
||||| | |||||||||||| ||||||||||| ||||| || ||||||||||||||| ||
Sbjct 181 GATGGACGTGGCATGATTGTCTCGTGGGTCACACCGTTGAATCTCGCTGGTTCTAACGTT 240
Query 241 GTTACTTACTGGATCGCTACTAATGGTAGTGACATAAAGCCAGCAAAAAAGAGAGCTCAC 300
||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct 241 GTTACCTACTGGATCGCTACTAATGGTAGTGACGTAAAGCCAGCGAAAAAGAGAGCTCAT 300
Query 301 GCTTCCACGAAATCGTACAGATTCTATGACTAT-GCTTCTGGATTTCTGCATCACGCCAC 359
|| ||||| ||||| |||||||||||||||||| | ||| |||||||| |||||||||||
Sbjct 301 GCCTCCACTAAATCTTACAGATTCTATGACTATAG-TTCAGGATTTCTCCATCACGCCAC 359
Query 360 CATTAATGGACTCGAGTATGATACCAAATACATCTATGAGGTTGGTACCGATAAATCCGT 419
||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 360 AATTAAGGGACTCGAGTACGATACCAAGTACATCTATGAGGTTGGTACCGATAAATCCGT 419
Query 420 TAGACAATTCTCCTTCACTACTCCTCCAAAGATCGGACCCGATGTTCCATACACGTTCGG 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 420 TAGACAATTCTCCTTCACTACTCCTCCAAAGATCGGACCCGATGTTCCATACACATTCGG 479
Query 480 CATCATTGGTGATCTTGGACAAACTTATGCTTCAAATGAGACATTGTATCATTACATGTC 539
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 480 CATCATTGGTGATCTTGGACAGACTTATGCTTCTAATGAGACATTGTATCATTACATGTC 539
Query 540 GAATCCTAAAGGCCAAGCTGTTCTATTTGCCGGAGACTTGTCATACGCAGACGACCACCC 599
|| |||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||
Sbjct 540 AAACCCTAAAGGCCAAGCTGTTCTCTTTGCTGGAGACTTGTCATATGCAGACGACCACCC 599
Query 600 GAATCATGACCA-ACGAAAGTGGGATACTTGGGGAAGATTTATGGAGCCTTGCGCTGCTT 658
|||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 600 GAATCATGACCAGA-GAAAGTGGGATACTTGGGGAAGATTTATGGAGCCTTGTGCTGCTT 658
Query 659 ACCAGCCCTTCATCTTTGCTGCCGGAAATCATGAGATTGATTTCGTTCCTAACATAGGTG 718
||||||||||||||||||||||||| |||||||| |||||||| ||||| ||||| ||||
Sbjct 659 ACCAGCCCTTCATCTTTGCTGCCGGGAATCATGAAATTGATTTTGTTCCAAACATTGGTG 718
Query 719 AGCCTCACGCCTTCAAGCCATACACTCACCGTTACCCCAATGCTTACAAAGCTTCACAGA 778
|||||||||| |||||||| ||||||||||||||||| || || |||||||||||||| |
Sbjct 719 AGCCTCACGCATTCAAGCCCTACACTCACCGTTACCCTAACGCCTACAAAGCTTCACAAA 778
Query 779 GCACTTCTCCTCTTTGGTACTCAGTTAGACGTGCTTCTGCTCACATCATCGTCCTCTCTT 838
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 779 GCACTTCTCCTCTTTGGTACTCAGTGAGACGTGCTTCTGCTCACATCATCGTCCTCTCTT 838
Query 839 CTTACTCGGCCTATGGAAAATACACGCCTCAATACATTTGGCTTGAGCAAGAGCTGAAGA 898
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 839 CTTACTCGGCCTACGGAAAATACACGCCTCAATACATTTGGCTTGAGCAAGAGCTAAAGA 898
Query 899 ATGTGAACAGAGAAGAGACTCCATGGTTGATTGTCATGGTTCACTCTCCGTGGTACAACA 958
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 899 ATGTGAACAGAGAAGAGACTCCATGGTTGATTGTCATTGTTCACTCTCCGTGGTACAACA 958
Query 959 GTAATAACTACCATTACATGGAAGGTGAGAGCATGAGACTTATGTTTGAGTCGTGGCTCG 1018
|||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 959 GTAATAACTATCATTACATGGAAGGTGAGAGCATGAGAGTTATGTTTGAGTCGTGGCTCG 1018
Query 1019 TTAATAGCAAGGTCGATTTGGTTTTGTCGGGTCATGTTCATGCCTATGAGAGATCCGAAC 1078
|||| |||||||| |||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct 1019 TTAACAGCAAGGTTGATTTGGTTTTGTCTGGTCATGTCCATGCCTATGAGAGATCTGAAC 1078
Query 1079 GTATCTCTAATATTAAGTACAACATCACCAATGGGTTGAGCTCTCCTGTGAAAGATCTTT 1138
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct 1079 GTATCTCCAATATTAAGTACAACATCACCAATGGCTTGAGCTCTCCTGTGAAAGATCCTA 1138
Query 1139 CTGCTCCTATTTACATCACTATCGGAGATGGAGGAAACATTGAAGGAATTGCAAATAGTT 1198
||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1139 ATGCTCCTATTTACATTACTATCGGAGATGGAGGAAACATTGAAGGAATTGCAAACAGTT 1198
Query 1199 TCGTGGATCCACAACCGAGTTACTCGGCATATAGAGAGGCGAGTTTTGGTCACGCGGTTT 1258
||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||
Sbjct 1199 TCGTGGATCCACAACCGAGTTACTCAGCATATAGAGAGGCGAGTTTTGGCCATGCGGTTT 1258
Query 1259 TAGAGATTAAGAACAGGACTCACGCGCAGTACACATGGCATAGGAACCAAGACAACGAGC 1318
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TAGAGATTATGAATAGGACTCACGCGCAGTACACATGGCATAGGAACCAAGACAACGAGC 1318
Query 1319 CTATTGCTGCCGATTCTGTTATGTTGCTTAACAGACATTTCTTTCCGGGGGAGGAAATAG 1378
|| | || || || ||| ||||||||| ||||||||| |||||||||| |||||||||||
Sbjct 1319 CTGTCGCCGCTGACTCTATTATGTTGCATAACAGACACTTCTTTCCGGTGGAGGAAATAG 1378
Query 1379 TTTCCAGCAACATTAGGG 1396
||||||||||||||||||
Sbjct 1379 TTTCCAGCAACATTAGGG 1396
> AT4G36350.1 | Symbols: ATPAP25, PAP25 | purple acid phosphatase
25 | chr4:17173737-17175857 REVERSE LENGTH=1401
Length=1401
Score = 1317 bits (713), Expect = 0.0
Identities = 1165/1382 (84%), Gaps = 36/1382 (3%)
Strand=Plus/Plus
Query 31 TTCTTAAGCATCACTACTGTGATCAATGGTGGAATAACAAGTGAA-TTTGTCCGCCA-AG 88
||| ||||||| | ||||| |||||| |||||| |||||| || |||||||| || ||
Sbjct 35 TTC-TAAGCATTGCCACTGTAATCAATAGTGGAACAACAAG-CAACTTTGTCCG-CACAG 91
Query 89 CTTTACCATCGATTGAGATGTCTCTCGATACTTTCCCTTCTCCTGATGGCT-ACAACACT 147
|| |||||| | ||||||||||||||| ||||| || ||||| | ||| | | || ||
Sbjct 92 CTCAACCATCAACTGAGATGTCTCTCGAAACTTTTCCATCTCCGGCTGG-TCATAATGCT 150
Query 148 CCTGAACAGGTTCATCT-GACTCAAGGAGACCATGATGGGCATGGCATGATTGTTTCGTG 206
|| |||||||||||| | | | |||||||| | |||| | ||| || || | |||||
Sbjct 151 CCGGAACAGGTTCATATCGTC-CAAGGAGATTACAATGGACGTGGTATAATCATATCGTG 209
Query 207 GGTCACGCCGTTAAACCTCGCTGGTTCTAACATTGTTACTTACTGGATCGCTACTAATGG 266
||| || || |||||||| |||||||| ||| | |||||||| |||| || | | ||
Sbjct 210 GGTGACCCCCTTAAACCTAGCTGGTTCAAACGTGGTTACTTATTGGAAGGC-AGT--TGA 266
Query 267 TAGTGACAT-AAAGCCAGCAAAA-AAGAGAGCTCACGCTTCCACGAAATCGTACAGATTC 324
| |||| | ||| || | |||| ||||||| ||| || || || || ||| ||||
Sbjct 267 TGGTGATGTGAAA-CC-GAAAAAGAAGAGAGGTCATGCCTCTACCTCGTCTTACCGATTT 324
Query 325 TATGACTATGCTTCTGGATTTCTGCATCACGCCACCATTAATGGACTCGAGTATGATACC 384
||||||||| ||||||| ||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct 325 TATGACTATACTTCTGGTTTTCTTCATCACGCCACAATTAAAGGACTCGAGTATGATACC 384
Query 385 AAATACATCTATGAGGTTGGTACCGATAAATCCGTTAGACAATTCTCCTTCACTACTCCT 444
|||||||||||||||||||| || ||| ||||||||||||||| |||||||||| ||||
Sbjct 385 AAATACATCTATGAGGTTGGAACTGATGGATCCGTTAGACAATTTTCCTTCACTAGTCCT 444
Query 445 CCAAAGATCGGACCCGATGTTCCATACACGTTCGGCATCATTGGTGATCTTGGACAAAC- 503
|||||| | ||||| || ||||||||||| |||||||| ||||||||||||||||||||
Sbjct 445 CCAAAGGTTGGACCTGACGTTCCATACACTTTCGGCATTATTGGTGATCTTGGACAAACT 504
Query 504 TTATGCTTCAAATGAGACATTGTATCATTACATGTCGAATCCTAAAGGCCAAGCTGTTCT 563
||| ||||| || |||||||| |||||||||||||| || ||||||||||||||||||||
Sbjct 505 TTA-GCTTCTAACGAGACATTATATCATTACATGTCAAACCCTAAAGGCCAAGCTGTTCT 563
Query 564 ATTTGCC-GGAGACTTGTCATACGCAGACGACCACCCGAATCATGACCA-ACGAAAGTGG 621
|| || |||||||| || |||||||| ||||| || || ||||| || | ||||||||
Sbjct 564 -CTTCCCTGGAGACTTATCTTACGCAGATGACCATCCAAACCATGATCAGA-GAAAGTGG 621
Query 622 GATACTTGGGGAAGATTTATGGAGCCTTGCGCTGCTTACCAGCCCTTCATCTTTGCTGCC 681
||| | ||||||||||| |||||||||| ||||||||||| ||||||||| |||||||
Sbjct 622 GATTCGTGGGGAAGATTCGTGGAGCCTTGTGCTGCTTACCAAACCTTCATCTATGCTGCC 681
Query 682 GGAAATCATGAGATTGATTTCGTTCCTAACATAGGTGAGCCTCACGCCTTCAAGCCATAC 741
|| ||||| || |||||||| || || ||||| || |||||||| ||||||||||| |||
Sbjct 682 GGGAATCACGAAATTGATTTTGTCCCAAACATTGGGGAGCCTCATGCCTTCAAGCCCTAC 741
Query 742 ACTCACCGTTACCCCAATGCTTACAAAGCTTC-ACAGAGCACT-TCTCCTCTTTGGTACT 799
| ||||||||| | || || ||||| || || | |||||| | ||||||||||||||||
Sbjct 742 ATTCACCGTTATCATAACGCCTACAAGGCCTCGA-AGAGCA-TATCTCCTCTTTGGTACT 799
Query 800 C-AGTTAGACGTGCTTCTGCTCACATCATCGTCCTCTCTTCTTACTCGGCCTATGGAAAA 858
| | |||||||||| ||||||||||||||||||||||| ||||| || ||||| ||||||
Sbjct 800 CTA-TTAGACGTGCATCTGCTCACATCATCGTCCTCTCCTCTTATTCTGCCTACGGAAAA 858
Query 859 TACACGCCTCAATACATTTGGCTTGAGCAAGAGCTGAAGAATGTGAACAGAGAAGAGACT 918
||||| ||||||||| | ||||| ||||||||| ||||||| ||||||||||||||||||
Sbjct 859 TACACACCTCAATACGTGTGGCTCGAGCAAGAGTTGAAGAAGGTGAACAGAGAAGAGACT 918
Query 919 CCATGG-TTGATTGTCATGGTTCACTCTCCGTGGTACAACAGTAATAACTACCATTACAT 977
|||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 919 CCATGGCTT-ATTGTCATGGTTCACTCGCCGTGGTACAACAGTAATAACTACCATTACAT 977
Query 978 GGAAGGTGAGAGCATGAGA-CTTATGTTTGAGTCGTGGCTCGTTAATAGCAAGGTCGATT 1036
||||||||||||||||||| | ||||||||||||||| ||||||| |||||||| ||||
Sbjct 978 GGAAGGTGAGAGCATGAGAGCA-ATGTTTGAGTCGTGGTTCGTTAACAGCAAGGTTGATT 1036
Query 1037 TGGTTTTGTCGGGTCATGTTCATGCCTATGAGAGATCCGAACGTATCTCTAATATTAAGT 1096
|||||||||| ||||| || ||| |||||||||||||||||||| |||| |||||||| |
Sbjct 1037 TGGTTTTGTCTGGTCACGTCCATTCCTATGAGAGATCCGAACGTGTCTCCAATATTAAAT 1096
Query 1097 ACAACATCACCAATGGGTTGAGCTCTCCTGTGAAAGATCTTTCTGCTCCTATTTACATCA 1156
|||||||||||||||| ||||||| |||||||||||| | ||||||||| || |||||||
Sbjct 1097 ACAACATCACCAATGGCTTGAGCTATCCTGTGAAAGACCCTTCTGCTCCAATCTACATCA 1156
Query 1157 CTATCGGAGATGGAGGAAACATTGAAGGAATTGCAAATAGTTT--CGTGGATCCACAACC 1214
||||||||||||||||||||||||||||||| ||||||||||| | || |||| |||||
Sbjct 1157 CTATCGGAGATGGAGGAAACATTGAAGGAATCGCAAATAGTTTTAC-TG-ATCCGCAACC 1214
Query 1215 GAGTTACTCGGCATATAGAGAGGCGAGTTTTGGTCACGCGGTTTTAGAGATTAAGAACAG 1274
||| || ||||| |||||||| || ||||||||||| || ||||| |||||| | || ||
Sbjct 1215 GAGCTATTCGGCGTATAGAGAAGCTAGTTTTGGTCATGCAGTTTTGGAGATTTACAATAG 1274
Query 1275 GACTCACGCGCAGTACACATGGCATAGGAACCAAGACAACGAGCCTATTGCTGCCGATTC 1334
|||||||| | |||||||||||||||||||||||||| || ||| |||| || |||||
Sbjct 1275 AACTCACGCATACTACACATGGCATAGGAACCAAGACAATGAACCTGTTGCCGCTGATTC 1334
Query 1335 TGTTATGTTGCTTAACAGACATTTCTTTCCGGGGGAGGAAATAGTTTCCAGCAACATTAG 1394
||||||||| ||||||| |||||||||| | |||||| ||| || |||||| |||
Sbjct 1335 AATTATGTTGCATAACAGATATTTCTTTCCAGTAGAGGAATTAGAATCTGGCAACACTAG 1394
Query 1395 GG 1396
||
Sbjct 1395 GG 1396
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 69025749375
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5