BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474823
Length=903
Score E
Sequences producing significant alignments: (Bits) Value
AT1G56650.1 | Symbols: PAP1, MYB75, SIAA1, ATMYB75 | production... 1343 0.0
AT1G66390.1 | Symbols: ATMYB90, PAP2, MYB90 | myb domain protei... 815 0.0
AT1G66370.1 | Symbols: MYB113, AtMYB113 | myb domain protein 11... 532 2e-150
AT1G66380.1 | Symbols: MYB114, AtMYB114 | myb domain protein 11... 490 1e-137
AT1G56640.1 | Symbols: | pseudogene, similar to An2 truncated ... 150 2e-35
> AT1G56650.1 | Symbols: PAP1, MYB75, SIAA1, ATMYB75 | production
of anthocyanin pigment 1 | chr1:21233595-21235137 REVERSE
LENGTH=914
Length=914
Score = 1343 bits (727), Expect = 0.0
Identities = 846/904 (94%), Gaps = 5/904 (1%)
Strand=Plus/Plus
Query 1 ATACCTTTTAAAACTTGTTTAGATATTTTACGTATATCTATCTTTGTTCCATGGAGGGTT 60
|||||||||| || ||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct 1 ATACCTTTTACAATTTGTTTATATATTTTACG--TATCTATCTTTGTTCCATGGAGGGTT 58
Query 61 CGTCCAAAGGGCTACGAAAAGGTGCTTGGACTGCTGAAGAAGATAGTCTTTTGAGACAGT 120
||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 59 CGTCCAAAGGGCTGCGAAAAGGTGCTTGGACTACTGAAGAAGATAGTCTCTTGAGACAGT 118
Query 121 GCATTAATAAGTTTGGTGAAGGCAAATGGCACCAAGTTCCTGTAAGAGCTGGGCTAAACC 180
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 119 GCATTAATAAGTATGGAGAAGGCAAATGGCACCAAGTTCCTGTAAGAGCTGGGCTAAACC 178
Query 181 GGTGCAGGAAAAGTTGTAGACTAAGATGGTTGAACTATTTGAAGCCAAGTATCAAGAGAG 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 179 GGTGCAGGAAAAGTTGTAGATTAAGATGGTTGAACTATTTGAAGCCAAGTATCAAGAGAG 238
Query 241 GAAAACTTAGCTCTGATGAAGTCGATCTTCTTCTTCGCCTTCATAGGCTTCTAGGAAATA 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 239 GAAAACTTAGCTCTGATGAAGTCGATCTTCTTCTTCGCCTTCATAGGCTTCTAGGGAATA 298
Query 301 GGTGGTCTTTAATTGCTGGAAGATTACCTGGTCGGACCGCAAATGATGTCAAGAATTACT 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 299 GGTGGTCTTTAATTGCTGGAAGATTACCTGGTCGGACCGCAAATGACGTCAAGAATTACT 358
Query 361 GGAACACTCATCTGAGTAAGAAACATGAACCATGTTGTAAGATCAAGATGAAAAAGAAAA 420
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |
Sbjct 359 GGAACACTCATCTGAGTAAGAAACATGAACCGTGTTGTAAGATAAAGATGAAAAAGAGAG 418
Query 421 ACATTACGCCCATTCCTACAACACCAGCACTAAAAATCAATGTTTATAAGCCTCGACCTC 480
||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct 419 ACATTACGCCCATTCCTACAACACCGGCACTAAAAAACAATGTTTATAAGCCTCGACCTC 478
Query 481 GATCCTTCGCAGTTAACAACGATTGCAACCATCTCAATGGCCCGCCAGAAGTTGACGTTA 540
|||||||| ||||||||||||| |||||||||||||||| ||| ||| ||||||||||||
Sbjct 479 GATCCTTCACAGTTAACAACGACTGCAACCATCTCAATGCCCCACCAAAAGTTGACGTTA 538
Query 541 ATCCTCCATGCCTTGGACTCAACAACAATAATGTTTGTGACAATAGTATCAAATACAACA 600
||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||
Sbjct 539 ATCCTCCATGCCTTGGACTTAACATCAATAATGTTTGTGACAATAGTATCATATACAACA 598
Query 601 AAGATGAGAAGAAAGATCAGCTTGTGAATAATTTGATTCATGGAGGTAATATGTGGTTGG 660
||||| |||||||||| || || ||||||||||||||| |||||| |||||||||||| |
Sbjct 599 AAGATAAGAAGAAAGACCAACTAGTGAATAATTTGATTGATGGAGATAATATGTGGTTAG 658
Query 661 AGAGTTTCCTTGAGGAGAGCCAAGAGGAAGATATCTTGGTTCCAGAAGCGACGACAACAG 720
||| ||||| ||||| |||||||||| |||||| |||||||| ||||||||||||||||
Sbjct 659 AGAAATTCCTAGAGGAAAGCCAAGAGGTAGATATTTTGGTTCCTGAAGCGACGACAACAG 718
Query 721 AAAAAGGGGACACCTTGGCATTTGACGTTGATCAACTTTGGAGTCTTTTCGATGGAGAGA 780
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 719 AAAAGGGGGACACCTTGGCTTTTGACGTTGATCAACTTTGGAGTCTTTTCGATGGAGAGA 778
Query 781 CTGTAAAATTTGATTAGTGTTTGGAACATATGTTTGCGTTTGTGTGTGGGTTTGCTTTCG 840
|||| ||||||||||||||||| |||||| ||||||||||||||| | |||||||||||
Sbjct 779 CTGTGAAATTTGATTAGTGTTTCGAACATTTGTTTGCGTTTGTGTATAGGTTTGCTTTCA 838
Query 841 TATTT-AATTAGTGTGTGTTTTAATAAATAAGCTAATAATTTTTAGAATTATAATGAAAT 899
||| |||| |||||||||| ||||||||||||||| ||||||| ||| |||||||||
Sbjct 839 CCTTTTAATT--TGTGTGTTTTGATAAATAAGCTAATAGTTTTTAGCATTTTAATGAAAT 896
Query 900 ATTT 903
||||
Sbjct 897 ATTT 900
> AT1G66390.1 | Symbols: ATMYB90, PAP2, MYB90 | myb domain protein
90 | chr1:24763957-24765541 FORWARD LENGTH=986
Length=986
Score = 815 bits (441), Expect = 0.0
Identities = 709/836 (85%), Gaps = 27/836 (3%)
Strand=Plus/Plus
Query 41 TCTTTGTTCCATGGAGGGTTCGTCCAAAGGGCT-ACGAAAAGGTGCTTGGACTGCTGAAG 99
|||||| |||||||||||||||||||||||| | | | |||||||| |||||||||||||
Sbjct 86 TCTTTGGTCCATGGAGGGTTCGTCCAAAGGGTTGA-GGAAAGGTGCATGGACTGCTGAAG 144
Query 100 AAGATAGTCTTTTGAGAC-AGTGCATTAATAAGTTTGGTGAAGGCAAATGGCACCAAGTT 158
|||||||||| ||||| | | || ||| |||||| ||| |||||||||||||| ||||||
Sbjct 145 AAGATAGTCTCTTGAGGCTA-TGTATTGATAAGTATGGAGAAGGCAAATGGCATCAAGTT 203
Query 159 CCTGTAAGAGCTGGGCTAAACCGGTGCAGGAAA-AGTTGTAGACTAAGATGGTTGAACTA 217
||| | |||||||||||||| || |||| |||| ||||||||||||||||||||||||||
Sbjct 204 CCTTTGAGAGCTGGGCTAAATCGATGCA-GAAAGAGTTGTAGACTAAGATGGTTGAACTA 262
Query 218 TTTGAAGCCAAGTATCAAGAGAGGAAAACTTAGCTCTGATGAAGTCGATCTTCTTCTTCG 277
|||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||
Sbjct 263 TTTGAAGCCAAGTATCAAGAGAGGAAGACTTAGCAATGATGAAGTTGATCTTCTTCTTCG 322
Query 278 CCTTCATAGGCTTCTAGGAAATAGGTGGTCTTTAATTGCTGGAAGATTACCTGGTCGGAC 337
|||||||| ||||||||||||||||||||| || |||||||| |||| |||||||||||
Sbjct 323 CCTTCATAAGCTTCTAGGAAATAGGTGGTCCTTGATTGCTGGTCGATTGCCTGGTCGGAC 382
Query 338 CGCAAATGATGTCAAGAATTACTGGAACACTCATCTGAGTAAGAAACATGAA-C--CATG 394
||| ||||||||||| |||||||||||||| ||||||||||| |||||||| | | ||
Sbjct 383 CGCTAATGATGTCAAAAATTACTGGAACACCCATCTGAGTAAAAAACATGAGTCTTCGTG 442
Query 395 TTGTAAGATC-AAGATGAAAAAGAAAAACATTACG-CCCATTCCTACAACACCAG-CACT 451
||||||| || || ||||||||||||||||||| ||| | ||||||||||| | | |
Sbjct 443 TTGTAAG-TCTAAAATGAAAAAGAAAAACATTATTTCCCCT-CCTACAACACCGGTC-CA 499
Query 452 AAAAATCAATGTTTATAAGCCTCGACCTCGATCCTTCGCAGTTAACAACGATTGCAACCA 511
||||||| ||||| |||||||||||||||||||||| | |||||||| | ||||| |||
Sbjct 500 AAAAATCGGTGTTTTTAAGCCTCGACCTCGATCCTTCTCTGTTAACAATGGTTGCAGCCA 559
Query 512 TCTCAATGGCCCGCCAGAAGTTGACGTTAAT-CCTCCATGCCTTGGACTCAACAACAATA 570
||||||||| | |||||||||||| ||||| ||| |||||||||||||||| || ||||
Sbjct 560 TCTCAATGGTCTGCCAGAAGTTGAT-TTAATTCCTTCATGCCTTGGACTCAAGAAAAATA 618
Query 571 ATGTTTGTGACAATAGTATCAAATACAACAAAGATGA-GAAGAAAGATCAGCTTGTGAAT 629
|||||||||| |||||||||| || ||||||||||| || ||||||| | ||||||||
Sbjct 619 ATGTTTGTGAAAATAGTATCACATGTAACAAAGATGATGA-GAAAGATGATTTTGTGAAT 677
Query 630 AATTTGATTCATGGAGGTAATATGTGGTTGGAGAGTTTCCTTGAGGAGAGCCAAGAGGAA 689
||| | || |||||| ||||||||||||||||| ||| || | ||| | |||||| |
Sbjct 678 AATCTAATGAATGGAGATAATATGTGGTTGGAGAATTTACTGGGGGAAAACCAAGAAGCT 737
Query 690 GATATC--TTGGTTCCAGAAGCGACGACAACAGAAAAAGGGGACACCTTGGCATTTGACG 747
||| | ||| |||| |||||||||||| | ||| | |||| ||| ||||| |||||||
Sbjct 738 GATG-CGATTG-TTCCTGAAGCGACGACAGCTGAACATGGGGCCACTTTGGCGTTTGACG 795
Query 748 TTGATCAACTTTGGAGTCT-TTTCGATGGAGAGACTGTAAAATTTGATTAGTGTTTGGAA 806
|||| |||||||||||||| ||| |||||||||||||| || ||||||||||||| |
Sbjct 796 TTGAGCAACTTTGGAGTCTGTTT-GATGGAGAGACTGTTGAACTTGATTAGTGTTTCTCA 854
Query 807 CA-TATGTTTGCGTTTGTGTGTGGGTTTGCTTTCGTATTTAATTAGTGTGTGTTTT 861
| | ||||| | ||||| |||| ||| ||||||||||| | || ||| | ||||
Sbjct 855 CCGTTTGTTTAAGATTGTGGGTGGCTTTTCTTTCGTATTTTAGTAATGTAT-TTTT 909
> AT1G66370.1 | Symbols: MYB113, AtMYB113 | myb domain protein
113 | chr1:24753634-24754604 FORWARD LENGTH=741
Length=741
Score = 532 bits (288), Expect = 2e-150
Identities = 524/634 (83%), Gaps = 31/634 (5%)
Strand=Plus/Plus
Query 64 CCAAAGGGCT-ACGAAAAGGTGCTTGGACTGCTGAAGAAGATAGTCTTTTGAGACAGTGC 122
|||||||| | | |||||||| | |||||| |||||||||||| ||| ||||| || |||
Sbjct 14 CCAAAGGGTTGA-GAAAAGGTACATGGACTACTGAAGAAGATATTCTCTTGAGGCAATGC 72
Query 123 ATTAATAAGTTTGGTGAAGGCAAATGGCACCAAGTTCCTGTAAGAGCTGGGCTAAACCGG 182
||| |||||| ||| |||||||||||||| | ||||||| ||||| |||| || || |||
Sbjct 73 ATTGATAAGTATGGAGAAGGCAAATGGCATCGAGTTCCTTTAAGAACTGGTCTCAATCGG 132
Query 183 TGCAGGAAA-AGTTGTAGACTAAGATGGTTGAACTATTTGAAGCCAAGTATCAAGAGAGG 241
||| |||| ||||||||||| ||||||||||| ||||||||||||||||| ||||||||
Sbjct 133 TGC-CGAAAGAGTTGTAGACTTAGATGGTTGAATTATTTGAAGCCAAGTATTAAGAGAGG 191
Query 242 AAAACT-TAGCTCTGATGAAGTCGATCTTCTTCTTCGCCTTCATAGGCTTCTAGGAAATA 300
|||||| | |||| |||||||| |||||| ||||||||||||||| |||||||||||||
Sbjct 192 AAAACTCT-GCTCCGATGAAGTTGATCTTGTTCTTCGCCTTCATAAACTTCTAGGAAATA 250
Query 301 GGTGGTCTTTAATTGCTGGAAGATTACCTGGTCGGACCGCAAATGATGTCAAGAATTACT 360
||||||| || || ||||| ||||| ||||||||||| || |||||||||||||||||||
Sbjct 251 GGTGGTCCTTGATCGCTGGTAGATTGCCTGGTCGGACTGCTAATGATGTCAAGAATTACT 310
Query 361 GGAACACTCATCTGAGTAAGAA--AC-ATGAACCATGTTGTAAGATC-AAGATGAAAAAG 416
||||||||||| |||||||||| || |||||| ||| ||||||| | ||||||| |||
Sbjct 311 GGAACACTCATTTGAGTAAGAAGCACGATGAACGATGCTGTAAGA-CGAAGATGATAAAC 369
Query 417 AAAAACATTACGCC-CATTCCTACAACACCAGCACTAAAAATCAATGTTTATAA-GCCTC 474
||||||||||| | ||| ||||| || | || | ||||||| |||||| ||| |||||
Sbjct 370 AAAAACATTACTTCTCAT-CCTACTTCATCGGCCCAAAAAATCGATGTTT-TAAAGCCTC 427
Query 475 GACCTCGATCCTTCGCAGTTAACAAC-GATTGCAACCATCTCAATGGCCCGCCAGAAGTT 533
| |||||||||||| | | ||| || | ||||||| || ||||| | |||| |||||
Sbjct 428 GGCCTCGATCCTTCTCCGATAAAAATAG-TTGCAACGATGTCAATATCTTGCCAAAAGTT 486
Query 534 GACGTTAATCCTC--CATGCCTTGGACTCAACAACAATAATGTTTGTGACAA-TAGTATC 590
|||||| |||| ||| | ||||||||||||||||| |||||||||| || ||||||
Sbjct 487 GACGTTGTTCCTTTACAT-C-TTGGACTCAACAACAATTATGTTTGTGA-AAGTAGTATT 543
Query 591 AAATACAACAAAGATGAG-AAGAAAGATCAGCTTGTGAATAAT--T-TGATTC-ATGGAG 645
| || |||||||||||| || |||||| ||||| | |||| | | | ||| ||||||
Sbjct 544 ACATGTAACAAAGATGAGCAA-AAAGATAAGCTTATTAATATTAATCT-ATTGGATGGAG 601
Query 646 GTAATATGTGGTTGGAGAGTTTCCTTGAGG-AGA 678
||||||||||| ||| ||||| || |||| |||
Sbjct 602 ATAATATGTGGTGGGAAAGTTTACTGGAGGCAGA 635
> AT1G66380.1 | Symbols: MYB114, AtMYB114 | myb domain protein
114 | chr1:24757413-24758490 FORWARD LENGTH=420
Length=420
Score = 490 bits (265), Expect = 1e-137
Identities = 342/379 (90%), Gaps = 6/379 (2%)
Strand=Plus/Plus
Query 51 ATGGAGGGTTCGTCCAAAGGGCT-ACGAAAAGGTGCTTGGACTGCTGAAGAAGATAGTCT 109
||||||||||||||||||||| | | | |||||||| |||||||||||||||||||||||
Sbjct 1 ATGGAGGGTTCGTCCAAAGGGTTGA-GGAAAGGTGCATGGACTGCTGAAGAAGATAGTCT 59
Query 110 TTTGAGACAGTGCATTAATAAGTTTGGTGAAGGCAAATGGCACCAAGTTCCTGTAAGAGC 169
||||| ||||| ||| ||||| ||| |||||||||||||| ||||||||| |||||||
Sbjct 60 CTTGAGGCAGTGTATTGGTAAGTATGGAGAAGGCAAATGGCATCAAGTTCCTTTAAGAGC 119
Query 170 TGGGCTAAACCGGTGCAGGAAAAGTTGTAGACTAAGATGGTTGAACTATTTGAAGCCAAG 229
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 120 TGGGCTAAATCGGTGCAGGAAAAGTTGTAGACTAAGATGGTTAAACTATTTGAAGCCAAG 179
Query 230 TATCAAGAGAGGAAAACTTAGCTCTGATGAAGTCGATCTTCTTCTTCGCCTTCATAGGCT 289
|||||||||||||||| |||| ||||||||||| |||||||||||||| ||||||| |||
Sbjct 180 TATCAAGAGAGGAAAATTTAGTTCTGATGAAGTTGATCTTCTTCTTCGTCTTCATAAGCT 239
Query 290 TCTAGGAAATAGGTGGTCTTTAATTGCTGGAAGATTACCTGGTCGGACCGCAAATGATGT 349
|||||||||||||||||| || |||||||| ||||||||||||||||||| ||||||||
Sbjct 240 TCTAGGAAATAGGTGGTCCTTGATTGCTGGTCGATTACCTGGTCGGACCGCTAATGATGT 299
Query 350 CAAGAATTACTGGAACACTCATCTGAGTAAGAAACATGAACCATGTTGTAAGA-TCAAGA 408
|||||| ||||||||||| |||||||||||||| |||||||| |||||||| | | ||||
Sbjct 300 CAAGAACTACTGGAACACCCATCTGAGTAAGAAGCATGAACCGTGTTGTAAAACT-AAGA 358
Query 409 TGAAAAAGAA-AAACATTA 426
| |||||| | ||| ||||
Sbjct 359 T-AAAAAGGATAAATATTA 376
> AT1G56640.1 | Symbols: | pseudogene, similar to An2 truncated
protein, blastp match of 70% identity and 7.4e-11 P-value
to GP|7673092|gb|AAF66731.1|AF146706_1|AF146706 An2 truncated
protein {Petunia x hybrida} | chr1:21229999-21230469 REVERSE
LENGTH=471
Length=471
Score = 150 bits (81), Expect = 2e-35
Identities = 107/119 (90%), Gaps = 3/119 (3%)
Strand=Plus/Plus
Query 185 CAGGAAAAGTTGTAGACTAAGATGGTTGA-ACTATTTGAAGCCAAGTATCAAGAGAGGAA 243
|||||| ||||||||||||||||| || | ||||||||||||||||||||||||||||||
Sbjct 13 CAGGAAGAGTTGTAGACTAAGATGCTT-ATACTATTTGAAGCCAAGTATCAAGAGAGGAA 71
Query 244 AACTTAG-CTCTGATGAAGTCGATCTTCTTCTTCGCCTTCATAGGCTTCTAGGAAATAG 301
| |||| |||||||||||| ||||||||||||||||||| | ||||||||||||||
Sbjct 72 GATTTAGGCTCTGATGAAGTTGATCTTCTTCTTCGCCTTCCCAACCTTCTAGGAAATAG 130
Score = 135 bits (73), Expect = 5e-31
Identities = 159/200 (80%), Gaps = 7/200 (4%)
Strand=Plus/Plus
Query 303 TGGTCTTTAATTGCTGGAAGATTACCTGGTCGGACCGCAAATGATGTCAAGAATTACTGG 362
||| |||| |||||||| ||| |||||| |||| |||| | |||||| ||||||| |
Sbjct 222 TGG-CTTTGATTGCTGGTCTATTGGCTGGTCAGACCACAAACGGTGTCAAAAATTACTTG 280
Query 363 AACACTCATCTGAGTAAGAAACATGAACCATGTTGTAAGATCAAGATGAAAAAGAAAAA- 421
|||||||| |||||||||||||||||||||||||||||||| |||| ||||| |||||
Sbjct 281 AACACTCAACTGAGTAAGAAACATGAACCATGTTGTAAGATTTAGATAAAAAAAAAAAAA 340
Query 422 ---CATTACGCCCATTCCTACAACACCAGCACTAAAAATCAATGTTTATAAGCCTCGACC 478
|||||| ||| | |||| | || | |||||||| |||||| ||| | ||||||
Sbjct 341 AAGCATTACTTCCAATGCTACCATACTGGG-CTAAAAATGGATGTTTTTAATC-TCGACC 398
Query 479 TCGATCCTTCGCAGTTAACA 498
| ||||||| || ||||||
Sbjct 399 TTAATCCTTCTCATTTAACA 418
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 44105581066
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5