BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg474859 Length=1580 Score E Sequences producing significant alignments: (Bits) Value AT1G57750.1 | Symbols: MAH1, CYP96A15 | cytochrome P450, family... 2290 0.0 AT1G57740.1 | Symbols: | pseudogene, putative cytochrome P450,... 211 2e-53 > AT1G57750.1 | Symbols: MAH1, CYP96A15 | cytochrome P450, family 96, subfamily A, polypeptide 15 | chr1:21383981-21385709 REVERSE LENGTH=1729 Length=1729 Score = 2290 bits (1240), Expect = 0.0 Identities = 1428/1518 (94%), Gaps = 15/1518 (1%) Strand=Plus/Plus Query 30 CGTAGCATTCCTTTT-TTCTCTTGTATTTCTTTTTACTTGTTTCTTCATCCACAAGAAAC 88 |||| | ||| |||| || |||||||| || ||||||| ||||||| |||| ||||||| Sbjct 51 CGTAACGTTCATTTTCTT-TCTTGTATGCCTATTTACTTATTTCTTCCTCCAAAAGAAAC 109 Query 89 CTCACGGTCAGCCTATTCTCAAGAACTGGCCGTTCCTCGGGATGCTTCCAGGAATGCTCC 148 |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 110 CTCAAGGTCAGCCTATTCTCAAGAACTGGCCGTTCCTCAGGATGCTTCCAGGAATGCTCC 169 Query 149 CCCAAATCCCTCGTATTTACGACTGGACTGTCGAGGTGCTTGAGGCGAGCAATCTAACCT 208 ||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||| | Sbjct 170 ACCAAATCCCTCGTATCTACGACTGGACCGTCGAGGTGCTTGAGGCGACCAATCTAACTT 229 Query 209 TTTATTTCAAAGGGCCATGGCTTAGTGGAACGGACATGTTGTTCACCGCGGATCCAAAGA 268 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 230 TTTATTTCAAAGGGCCATGGCTTAGTGGAACGGACATGTTGTTCACCGCCGATCCAAGGA 289 Query 269 ATA-TCAATCACATACTAAGCTCAAACTTTGGGAATTACCCTAAAGGACCTGAGTTCAAG 327 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 290 ATATTC-ATCACATACTAAGCTCAAACTTTGGGAATTACCCTAAAGGACCTGAGTTCAAG 348 Query 328 AAAATCTTTGATGTTTTGGGAGAGGGAATCTTAACCGTTGATCTGGAGTTGTGGGAGGAT 387 || |||||||||||||||||||| |||||||||||||||||| | |||||||||||||| Sbjct 349 AAGATCTTTGATGTTTTGGGAGAAGGAATCTTAACCGTTGATTTTGAGTTGTGGGAGGAG 408 Query 388 CTGAGGAAGTCAAATCACGCCATGTTTCACAATCAAGATTTCCTCGAGCTCTCACTAAGT 447 |||||||||||||||||||| | || ||||||||||||||| ||||||||||| ||||| Sbjct 409 ATGAGGAAGTCAAATCACGCCCTATTCCACAATCAAGATTTCATCGAGCTCTCAGTAAGT 468 Query 448 AGCAACAAAAGTAAGTTAAAGGAAGGTCTTGTTCCTTTTCTTGATAATGCTGCTCATG-A 506 ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| | | Sbjct 469 AGCAATAAAAGTAAGTTAAAAGAAGGTCTTGTTCCTTTTCTTGATAATGCTGCTCA-GAA 527 Query 507 AAACATTATCATAGATTTACAAGATGTGTT-CATGAGATTCATGTTTGATACTTCTTCAA 565 ||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||| Sbjct 528 AAACATTATCATAGAATTACAAGATGTGTTCCA-GAGATTCATGTTTGATACTTCTTCAA 586 Query 566 TTTTGATGACTGGTTATGATCCAATGTCACTATCCATCGAAATGCTGGAAGTTGAGTTCG 625 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 587 TTTTGATGACTGGTTACGATCCAATGTCACTATCCATCGAAATGCTGGAAGTTGAGTTCG 646 Query 626 GTGAAGCTGCGGATATTGGCGAAGAAGCAATCTACTATAGACATTTCAAACCGGTGATGT 685 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct 647 GTGAAGCTGCGGATATTGGCGAAGAAGCAATCTATTATAGACATTTCAAACCGGTGATCT 706 Query 686 TGTGGAGGCTTCAAAACTGGCTTGGTATTGGACTTGAGAGGAAGATGAGAACAGCTTTGG 745 |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct 707 TGTGGAGGCTTCAAAACTGGATTGGTATTGGGCTTGAGAGGAAGATGAGAACAGCTTTGG 766 Query 746 CCACGGTCAATCGTATGTTTGCAAAGATCATATCTTCAAGAAGAAAAGAGGAGATAAGTC 805 |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 767 CCACTGTCAATCGTATGTTTGCGAAGATCATATCTTCAAGAAGAAAAGAGGAGATAAGTC 826 Query 806 GTGGGGAAACCGAGCC--A-TCCAAGGACGCGTTGACGTATTATATGAATGTGGACACGA 862 | | |||| ||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct 827 GCGCCAAAACGGAGCCATATTCCAAGGACGCGTTGACGTATTATATGAATGTGGACACGA 886 Query 863 CCAAATATAAGCTCTTGAAACCGAA-AAATGATACGTTTATAAGAGATGTTATTTTTAGT 921 ||||||||||||||||||||| || ||| |||| ||||||||||||||||||||||||| Sbjct 887 GCAAATATAAGCTCTTGAAACCTAATAAA-GATAAGTTTATAAGAGATGTTATTTTTAGT 945 Query 922 CTAGTGTTAGCAGGAAGGGACACCACAAGCTCAGCTCTCACTTGGTTCTTTTGGCTTCTT 981 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 946 CTAGTGTTAGCAGGAAGGGACACCACAAGCTCAGTTCTCACTTGGTTCTTTTGGCTTCTT 1005 Query 982 TCTAAGCATCCTCAAGTTATGGCCAAGATCAGACATGAGATCAACACAAAGTATGATCCT 1041 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| | Sbjct 1006 TCTAAGCATCCTCAAGTTATGGCCAAGCTCAGACATGAGATCAACACAAAGTTTGATAAT 1065 Query 1042 GAAGATCTAGAGAAGCTCGTGTATCTGCATGCTGCATTGTCCGAATCAATGAGACTCTAC 1101 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1066 GAAGATCTAGAGAAGCTCGTGTATCTGCATGCTGCATTGTCCGAATCAATGAGACTCTAC 1125 Query 1102 CCGCCACTTCCCTTCAACCACAAGGCTCCTGCAAAGCCAGATGTGCTTCCAAGCGGGCAC 1161 |||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||| Sbjct 1126 CCGCCACTTCCCTTCAACCACAAGTCTCCTGCGAAGCCAGATGTACTTCCAAGCGGGCAC 1185 Query 1162 AAAGTTGAACCAGAAT-CAAAGATCGTGATTTGTATTTACGCCTTGGGGAGGATGAGATC 1220 |||||||| || ||| ||||||||||||| ||||| || || ||||||||||||||||| Sbjct 1186 AAAGTTGATGCA-AATTCAAAGATCGTGATATGTATCTATGCATTGGGGAGGATGAGATC 1244 Query 1221 TGTATGGGGAGAAGATGCATCGGATTTCAAACCAGAGAGATGGATTTCAGACAATGGAGG 1280 ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1245 TGTATGGGGAGAAGACGCATTGGATTTCAAACCAGAGAGATGGATTTCAGACAATGGAGG 1304 Query 1281 TCTAAGACATGAACCTTCATACAAGTACGTGGCGTTTAATTCTGGTCCGAGAACTTGCTT 1340 |||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||| Sbjct 1305 TCTAAGACATGAACCTTCATACAAGTTCATGGCTTTTAATTCTGGTCCGAGAACTTGCTT 1364 Query 1341 GGGTAAACATCTAGCTCTCTTGCAGATGAAGATAGTAGCTCTGGAGATCATAAAAAACTA 1400 ||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct 1365 GGGTAAAAATCTAGCTCTCTTGCAGATGAAGATGGTAGCTCTGGAGATCATACGAAACTA 1424 Query 1401 TGACTTTAAGGTCATTGAAGGTCACAAGATCGAAGCAATTCCTTCTATCCTTCTCCGTAT 1460 |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct 1425 TGACTTTAAGGTCATTGAAGGTCACAAGGTCGAACCAATTCCTTCTATCCTTCTCCGTAT 1484 Query 1461 GAAACATGGTCTTAAAGTCACAGTCACTAAGAAGATGTGATTATTATGCTTGCTTGGCTT 1520 ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 1485 GAAACATGGTCTTAAAGTCACAGTCACAAAGAAGATATGATTATTATGCTTGCTTGGCTT 1544 Query 1521 CTACGGTAACTATTACTA 1538 |||||| ||||||||||| Sbjct 1545 CTACGGCAACTATTACTA 1562 > AT1G57740.1 | Symbols: | pseudogene, putative cytochrome P450, blastp match of 77% identity and 2.0e-12 P-value to GP|8096593|dbj|BAA96166.1||AP002092 unnamed protein product {Oryza sativa (japonica cultivar-group)} | chr1:21382131-21383304 FORWARD LENGTH=1174 Length=1174 Score = 211 bits (114), Expect = 2e-53 Identities = 148/164 (90%), Gaps = 3/164 (2%) Strand=Plus/Plus Query 871 AAGCTCTTGAAACCGAAAAATGATACGTTTATAAGAGATGTTATTTTTAGTCTAGTGTTA 930 ||||| ||||||| || |||||||| ||||||||||||||| ||||||||||||||||| Sbjct 951 AAGCTTTTGAAACGGAGAAATGATAAGTTTATAAGAGATGTGGTTTTTAGTCTAGTGTTA 1010 Query 931 GCAGGAAGGGACACCAC-AA--GCTCAGCTCTCACTTGGTTCTTTTGGCTTCTTTCTAAG 987 |||||||| || ||||| || | |||||||||||||||||||||||||||||||||||| Sbjct 1011 GCAGGAAGAGATACCACAAATTGATCAGCTCTCACTTGGTTCTTTTGGCTTCTTTCTAAG 1070 Query 988 CATCCTCAAGTTATGGCCAAGATCAGACATGAGATCAACACAAA 1031 ||||| || |||||| |||||||||| ||||||||||||||||| Sbjct 1071 CATCCACATGTTATGTCCAAGATCAGCCATGAGATCAACACAAA 1114 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 78011646930 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5