BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474887
Length=1247
Score E
Sequences producing significant alignments: (Bits) Value
AT1G64590.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 1740 0.0
> AT1G64590.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr1:23993533-23995509 FORWARD LENGTH=1373
Length=1373
Score = 1740 bits (942), Expect = 0.0
Identities = 1059/1116 (95%), Gaps = 5/1116 (0%)
Strand=Plus/Plus
Query 1 CTCAACTGCTCTCCCATAACCGAAACCGAGAGAAAGAAAAATAGAAAAAGATGATTGAGA 60
|||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||
Sbjct 13 CTCAACTGCTCTCCCATAACCGAAACCGAGAG--A-AAATATAGAAAAAGATGATTGAGA 69
Query 61 CGGTTAAACACCTGATCGGCTCCGGTGGTCCCAGCGGATTCGGGTCAAGATCCACCGCCG 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 70 CGGTTAAACACCTGATCGGCTCCGGTGGTCCCAGCGGATTCGGGTCAAGATCCACCGCCG 129
Query 121 ATCATGTCACTTGTAATTCTGATCTCCGTTCTCTAACTGCCATCATCACTGGCGCTACGT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 130 ATCATGTCACTTGTAATTCTGATCTCCGTTCTCTAACTGCCATCATCACTGGCGCGACGT 189
Query 181 CGGGGATAGGAGCGGAGACAGCGCGTGTTCTTGCTAAGCGTGGAGCTCGACTTGTGCTTC 240
||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||
Sbjct 190 CGGGGATAGGAGCTGAGACGGCGCGTGTTCTTGCTAAGCGTGGCGCAAGACTTGTGCTTC 249
Query 241 CGGCTCGGAGCGTCAAAACCGCCGAGGAAACAAAAGCTCGTATCCTGGCGGAGTTTCCTG 300
||||| | |||||||||||||||||||||||||| |||||||| ||| ||||||||||||
Sbjct 250 CGGCTAGAAGCGTCAAAACCGCCGAGGAAACAAAGGCTCGTATACTGTCGGAGTTTCCTG 309
Query 301 ATGCGGAGATCATCGTTATGCATCTTGATCTCAGCTCACTTACCTCTGTCCGCCGATTCG 360
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 310 ATGCGGAGATCATCGTTATGCATCTTGATCTCAGCTCACTTACCTCTGTTCGTCGATTCG 369
Query 361 TGGACGATTTCGAATCTCTCAATCTCCCACTCAACATCCTCATAAACAATGCCGGGAAAT 420
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 370 TGGACGATTTCGAATCTCTCAATCTCCCACTCAACATCCTCATAAACAATGCTGGGAAAT 429
Query 421 ACGCGCATAAGCATGCCATCTCTGAGGACGGTGTGGAGATGACCTTTGCCACTAATTATC 480
| ||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||
Sbjct 430 ATGCGCATAAGCATGCCCTCTCTGAGGACGGTGTGGAGATGACCTTCGCTACTAATTATC 489
Query 481 TCGGCCATTTTCTGCTGACGAAACTGCTGTTAAAGAAGATGATTGAAACGGCGGCACAAA 540
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 490 TCGGCCATTTTCTGCTGACTAAACTGCTGTTAAAGAAGATGATTGAAACGGCGGCACAAA 549
Query 541 CCGGCGTGCAAGGCCGTATAGTCAACGTCACGTCCGTCATCCATAGCTGGTTTTCCGGTG 600
||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct 550 CCGGCGTGCAAGGCCGTATCGTCAACGTCACGTCCGTCGTCCATAGCTGGTTTTCCGGTG 609
Query 601 ATATGTTGCAATATCTCGCCGATATCTCGCGGAACAATAGAAATTACGATGCGACTCGAG 660
|||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||
Sbjct 610 ATATGTTGCAATATCTCGCCGATATCTCACGAAACAATAGAAATTACGACGCGACTCGAG 669
Query 661 CCTACGCTCTCTCCAAGCTCGCCAACGTGCTCCACACTCTTGAGCTTTCCCGGATTCTCC 720
|||||||||||||||||||||||||||||||||||||| ||||||| || ||| ||||||
Sbjct 670 CCTACGCTCTCTCCAAGCTCGCCAACGTGCTCCACACTGTTGAGCTATCACGGCTTCTCC 729
Query 721 ATAAAATGGATGCTAATGTGACGGCCAATTGTGTCCATCCTGGTATCGTGAGAACCCGTC 780
||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct 730 ATAAAATGGATGCGAATGTGACGGCCAATTGTGTTCATCCTGGTATCGTGAAAACCCGTC 789
Query 781 TCACAAGAGATCGAGAAGGCATCGTCACAGACTTAGTGTTTTTCTTGACCTCCAAGCTAT 840
|||||||||||||||||||| ||||||| || ||||||||||||||||| ||||||||||
Sbjct 790 TCACAAGAGATCGAGAAGGCGTCGTCACTGATTTAGTGTTTTTCTTGACATCCAAGCTAT 849
Query 841 TGAAGTCTGTTCCTCAGGCAGCAGCTACGACATGTTACGTGGCAACAAGTCCGAGATTGA 900
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 850 TGAAGTCTGTTCCTCAGGCAGCAGCTACGACATGTTACGTGGCAACAAGTCCAAGATTGA 909
Query 901 GGAACGTGTGTGGCAAGTACTTCTCAGACTGCAACGAAGCTAGGACATCTAAATTCGGGT 960
||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||
Sbjct 910 GGAACGTGTGTGGCAAGTACTTCTCCGACTGCAACGAAGCTAGGTCATCTAAATCCGGGT 969
Query 961 CTTGCAATCTTAAAGCTCAGAGACTCTGGACTGCTTCTGACTTGTTGGTTTCTCCACCCA 1020
| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 970 CATGCAATCTCAAAGCTCAGAGACTCTGGACTGCTTCTGACTTGTTGGTTTCTCCACCTA 1029
Query 1021 ATTCCACTCCCGATCTTTCTCAAACGTCCTTTTAATCAACAA-CCATCCTAGCTATTT-C 1078
|||||||| || |||||||||| || ||||||||| |||||| ||||||||||||||| |
Sbjct 1030 ATTCCACTACCAATCTTTCTCATACCTCCTTTTAACCAACAAACCATCCTAGCTATTTTC 1089
Query 1079 TACGTGTATATCCCAAGCCCTCTATATAGTAATATA 1114
|||||||| ||| ||||||| ||||||||||||||
Sbjct 1090 TACGTGTAAATCTTAAGCCCTATATATAGTAATATA 1125
Score = 99.0 bits (53), Expect = 1e-19
Identities = 56/57 (98%), Gaps = 1/57 (2%)
Strand=Plus/Plus
Query 1136 GTGTGCATATAAGCAAGCCTCCCTATATTTAATATGTGGTTATGGTTTGACATTATT 1192
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1202 GTGTGCATAT-AGCAAGCCTCCCTATATTTAATATGTGGTTATGGTTTGACATTATT 1257
Score = 99.0 bits (53), Expect = 1e-19
Identities = 55/56 (98%), Gaps = 0/56 (0%)
Strand=Plus/Plus
Query 1192 TTGTAGGGTTTTGTAATCCTAGCTAGCTAGGTCCTTGTTATGTAatatatatatat 1247
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1290 TTGTAGGGTTTTGTAATCCTAGCTAGCTAGGTCCTTGTTATGTAATATATACATAT 1345
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 61294865445
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5