BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474909
Length=2272
Score E
Sequences producing significant alignments: (Bits) Value
AT1G64400.1 | Symbols: LACS3 | AMP-dependent synthetase and lig... 3494 0.0
AT4G23850.1 | Symbols: LACS4 | AMP-dependent synthetase and lig... 675 0.0
> AT1G64400.1 | Symbols: LACS3 | AMP-dependent synthetase and ligase
family protein | chr1:23915598-23919783 REVERSE LENGTH=2304
Length=2304
Score = 3494 bits (1892), Expect = 0.0
Identities = 2153/2280 (94%), Gaps = 14/2280 (1%)
Strand=Plus/Plus
Query 1 TCTAATTGCTTCTTTTACATTTCAACGAACAAAACAGATATATACATAGAAAGAAACACA 60
|||| ||||| ||||||||||||||||||||||||| || ||||||||||||||||| ||
Sbjct 25 TCTACTTGCTCCTTTTACATTTCAACGAACAAAACACATGTATACATAGAAAGAAACGCA 84
Query 61 GATACGCAGATATAGTAAATGGCGACTAGTCGATACATCTTTGAGGTTGAGAAGGGAAAA 120
||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 85 AATACGCAGATATAATAAATGGCGACTGGTCGATACATCGTTGAGGTTGAGAAGGGAAAG 144
Query 121 CAAGGCGTCCATGGAGGAAGTCCATCGGTCGGTCCGGTTTACCGGAGTATCTACGCTAAA 180
|||||||| ||||||||||||||||||||||||| || |||||||||||||| ||||||
Sbjct 145 CAAGGCGTTGATGGAGGAAGTCCATCGGTCGGTCCAGTGTACCGGAGTATCTATGCTAAA 204
Query 181 GGCGGTTTTCCAGAACCGGCC-GATGATCTCGTCAGTGCATGGGATATTTTCCGATTATC 239
| ||||||||| ||||| ||| |||||||||||||||||||||||||||||||| |||||
Sbjct 205 GACGGTTTTCCTGAACC-GCCTGATGATCTCGTCAGTGCATGGGATATTTTCCGTTTATC 263
Query 240 TGTGAAGAAATCTCCAGATAATCCTATGCTTGGTCGTAGAGAAATAGTTGATGGAAAAGC 299
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 264 TGTGGAGAAATCTCCAAATAATCCTATGCTTGGTCGTAGAGAAATAGTTGATGGAAAAGC 323
Query 300 TGGGAAATATATATGGCAAACTTACAAAGAAGTATATGATGTAGTGATTAAGCTTGGAAA 359
|||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 324 TGGGAAATATGTATGGCAAACTTACAAAGAAGTACATAATGTAGTGATTAAGCTTGGAAA 383
Query 360 CTCTATCAGAACTATTGGAGTTGGAAAAGGAGCGAAATGCGGTATTTATGGCGCCAATAG 419
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 384 CTCTATCAGAACTATTGGAGTTGGAAAAGGAGATAAATGCGGTATTTATGGCGCCAATAG 443
Query 420 TCCTGAATGGATTATAAGCATGGAGGCTTGCAATGCTCATGGACTCTACTGTGTACCTTT 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 444 TCCTGAATGGATTATAAGCATGGAGGCTTGCAATGCTCATGGACTCTACTGTGTACCTTT 503
Query 480 ATATGACACTCTAGGTGCTGGAGCAATAGAATTCATCATTTGTCATGCAGAAGTCTCACT 539
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 504 ATATGACACTCTAGGTGCTGGAGCAATAGAATTCATCATTTGTCATGCTGAGGTCTCACT 563
Query 540 CGCTTTCT-CTGAGGAGaaaaaaaTCTCTGAGTTATTGTTGACAGCTCCAAAATCAACTA 598
||||| | |||||||||| || || |||||||||||| ||||||||||||||||||||
Sbjct 564 TGCTTT-TGCTGAGGAGAACAAGATTTCTGAGTTATTGAAGACAGCTCCAAAATCAACTA 622
Query 599 GATATTTGAAGAATATTGTGAGCTTTGGTGAGGTTACAAATGGTCAAAGAGCAGAAGCTG 658
|||||||||| ||||||||||||||||||||||||||||| ||| |||| ||||||||
Sbjct 623 AATATTTGAAGTATATTGTGAGCTTTGGTGAGGTTACAAATAATCAGAGAGTAGAAGCTG 682
Query 659 AGAGGCATGGATTAACAATATATTCATGGGACCAATTCTTGAAGCTAGGTGAGGGTAAAC 718
||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 683 AGAGGCACAGATTAACAATATATTCATGGGACCAATTCTTGAAGCTAGGCGAGGGTAAAC 742
Query 719 ATTATGAATTACCAGAGAAGAGAAGCAGCGATATTTGCACCATCATGTATACAAGTGGCA 778
|||||||||||||||||||||| || |||||| |||||||||| ||||||||||||||||
Sbjct 743 ATTATGAATTACCAGAGAAGAGGAGAAGCGATGTTTGCACCATAATGTATACAAGTGGCA 802
Query 779 CAACTGGTGATCCTAAAGGAGTCTTGCTTACAAATGAGAGCATTATCCATCTACTTGAAG 838
|||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||
Sbjct 803 CAACTGGTGATCCTAAAGGAGTATTGCTTACAAATGAGAGCATTATTCATCTCCTTGAAG 862
Query 839 GTGTTAAAAAATTGCTTAAATCTATAAATGAAGAGTTAACCAGTAAAGATGTTTATCTCT 898
|||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||
Sbjct 863 GTGTTAAAAAATTGCTTAAAACTATTGATGAAGAGTTAACCAGTAAAGATGTATATCTCT 922
Query 899 CATATCTACCTCTGGCTCATATCTTCGATCGCGTGATTGAGGAGCTGTGTATATCTGAAG 958
||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||
Sbjct 923 CATATCTACCTCTGGCTCATATCTTCGATCGTGTGATTGAGGAGCTGTGTATTTATGAAG 982
Query 959 CAGCCTCTATCGGATTCTGGCGAGGGGATGTTAAGATATTGATAGAAGACATTGCTGCAT 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 983 CAGCCTCTATCGGATTCTGGCGAGGGGATGTTAAGATATTGATAGAAGACATTGCTGCAT 1042
Query 1019 TGAAACCGACTGTTTTCTGCGCTGTTCCTCGCGTGCTAGAGAGAATTTACACCGGTCTTC 1078
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 1043 TGAAACCGACTGTTTTCTGCGCTGTTCCTCGCGTTCTAGAGAGAATATACACCGGTCTTC 1102
Query 1079 AGCAGAAACTTTCTGATGGTGGTTTCATAAAGAAGAAATTATTCAACTTTGCATTCAACT 1138
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct 1103 AGCAGAAACTTTCTGATGGTGGTTTTGTAAAGAAGAAATTATTCAACTTTGCATTCAAAT 1162
Query 1139 ACAAACATAAAAACATG-ACGAAAGGGCAGCCTCATGAACAAGCATCTCCAATGGCTGAC 1197
||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||
Sbjct 1163 ACAAACATAAAAACATGGA-GAAAGGGCAGCCTCATGAACAAGCATCTCCAATAGCTGAC 1221
Query 1198 AGAGTTGTATTTAAAAAGGTAAAAGAAGGGTTGGGAGGAAACGTGCGTCTGATCCTCTCA 1257
| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1222 AAAATTGTATTTAAAAAGGTAAAAGAAGGGTTGGGAGGAAACGTGCGTCTTATCCTCTCA 1281
Query 1258 GGAGCAGCTCCTCTTGCAGCTCACATCGAATCTTTCCTTCGAGTTGTCGCGTGTGCTCAT 1317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1282 GGAGCAGCTCCTCTTGCAGCTCACATCGAATCTTTCCTTCGAGTTGTCGCGTGTGCTCAT 1341
Query 1318 GTTTTGCAAGGATACGGTCTAACAGAGAGTTGTGGTGGCACTTTTGTGTCCATTCCAAAT 1377
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1342 GTTTTGCAAGGATACGGTCTAACAGAGAGTTGTGGTGGGACTTTTGTGTCCATTCCAAAC 1401
Query 1378 GAGCTTGCAATGCTTGGAACGGTTGGTCCACCGGTTCCTAACGTTGACATAAGGCTCGAG 1437
|||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 1402 GAGCTTTCAATGCTTGGAACGGTTGGTCCACCGGTTCCAAACGTTGACATAAGGCTAGAG 1461
Query 1438 TCAGTTCCAGAGATGGGTTATGACGCTCTTGCAAGCAACCCACGTGGAGAGATTTGCATC 1497
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1462 TCAGTTCCAGAGATGGGTTATGACGCTCTTGCAAGCAATCCACGTGGAGAGATTTGCATC 1521
Query 1498 AGAGGAAAGACTTTGTTCTCTGGATATTACAAACGTGAAGATCTCACTCAAGAAGTCCTC 1557
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct 1522 AGGGGAAAGACTTTGTTCTCTGGATACTACAAACGTGAAGATCTCACTCAAGAAGTCTTC 1581
Query 1558 ATTGATGGTTGGCTTCATACTGGTGATGTTGGTGAGTGGCAACCAGATGGAGCCATGAAG 1617
|||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1582 ATTGATGGATGGCTTCACACTGGTGATGTCGGTGAGTGGCAACCAGATGGAGCCATGAAG 1641
Query 1618 ATAATCGATCGCAAGAAGAACATCTTTAAACTGTCTCAAGGAGAATACGTTGCGGTTGAG 1677
|| ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1642 ATCATCGACCGTAAGAAGAACATCTTTAAACTGTCTCAAGGAGAATACGTTGCCGTTGAG 1701
Query 1678 AACTTGGAGAACATATACAGTCATGTCGCGGCCATTGAATCGCTATGGGTATATGGAAAC 1737
||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct 1702 AACTTGGAGAACATATACAGTCATGTCGCCGCCATTGAATCGATATGGGTATATGGAAAC 1761
Query 1738 AGCTATGAGTCTTACTTAGTGGCTGTGGTATGTCCAAGCAAGATTCAGATTGAACATTGG 1797
|||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||
Sbjct 1762 AGCTATGAGTCTTACTTAGTGGCTGTGGTATGTCCAAGCAAGATCCAGATCGAGCATTGG 1821
Query 1798 GCCAAAGAACACAGTGTTTCAGGAGACTTTGAGTCTATCTGTCGAAACCAAAAGACTAAA 1857
||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1822 GCCAAAGAACACAAAGTTTCAGGAGACTTTGAGTCTATCTGCCGAAACCAAAAGACTAAA 1881
Query 1858 GAGTTTATCCTTGGAGAATTCAACAGAGTAGCCAAAGACAAAAAGCTGAAGGGATTTGAG 1917
|||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1882 GAGTTTGTCCTTGGAGAGTTCAACAGAGTAGCCAAAGACAAAAAGCTGAAGGGATTTGAG 1941
Query 1918 CTGATCAAAGATGTTCATTTGGACACGGTACCGTTCGACATGGAAAGAGATCTCATCACA 1977
|||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 1942 CTGATCAAAGGTGTTCATTTGGACACAGTCCCGTTCGACATGGAAAGAGATCTCATCACT 2001
Query 1978 CCTTCTTACAAGAAGAAAAGGCCTCAGCTTCTCAAGTACTATCAGAAAGAGATTGATAAA 2037
||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct 2002 CCTTCTTACAAGATGAAAAGACCTCAGCTTCTCAAGTACTATCAGAAAGAGATTGATGAA 2061
Query 2038 ATGTATAACAAAGACAAACAATTGAAGCTTTGAGTGTAAAGAAAGGAAGTTGTTGGACAA 2097
|||||||| ||| ||| | || || |||| |||||||||||||||||||||||||||||
Sbjct 2062 ATGTATAAGAAAAACAGAGAAGTGCAGCTACGAGTGTAAAGAAAGGAAGTTGTTGGACAA 2121
Query 2098 GTCTCTCAGGTTTATATGTTTCTCTTATCACTCTAATTCATATTGTTATATGTCTCTCTA 2157
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2122 ATCTCTCAGGTTTATATGTTTCTCTTATCACTCTAATTCATATTGTTATATGTCTCT--A 2179
Query 2158 TGTTGTGTTAATATCGAAGAGttttttt-ttt----GCTTGTAAACAACCAAATCTTTTT 2212
|| |||||||||||||||| |||||||| ||| |||||||||||||||||||||||
Sbjct 2180 TGCTGTGTTAATATCGAAGGGTTTTTTTCTTTCTTTGCTTGTAAACAACCAAATCTTTT- 2238
Query 2213 ATTGTACTCAACATTATCCTGTTTTGTGTATTTGTATTGATATTTTAATAAAGTTCTCTG 2272
||||| || |||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2239 ATTGTTCTTAACATTCTCCTGTTTTATGTATTTGTATTGATATTTTAATAAAGTTCTCTG 2298
> AT4G23850.1 | Symbols: LACS4 | AMP-dependent synthetase and ligase
family protein | chr4:12403454-12408335 REVERSE LENGTH=2339
Length=2339
Score = 675 bits (365), Expect = 0.0
Identities = 1458/1972 (74%), Gaps = 130/1972 (7%)
Strand=Plus/Plus
Query 136 GGAAGTCCATCGGTCGGTCCGGTTTACCGGAGTATCTACGCTAAAGG-CGGTTTTCCAGA 194
||||| ||||| || ||||| || ||||||||||||| || |||| ||| ||||| ||
Sbjct 130 GGAAGACCATCAGTTGGTCCAGTGTACCGGAGTATCTTTGC-CAAGGACGGATTTCCCGA 188
Query 195 ACCGGCCG-ATGATCTCG-TCAG-TGCATGGGATATTTTCCG-ATTATCTG-TGAAGAAA 249
||| || | || | | | || || |||||| ||||||| | | |||| || ||||
Sbjct 189 CCCGATCGAAGGA-ATGGAT-AGTTG-TTGGGATGTTTTCCGCA-TGTCTGTTG-AGAAG 243
Query 250 TCTCCAGATAATCCTATGCTTGGTCGTAGAGAAATAGTTGATGGAAAAGCTGGG-AAATA 308
| |||| | ||||| ||||| || || | || || || ||||| ||||| ||| || ||
Sbjct 244 TATCCAAACAATCCAATGCTGGGACGCCGCGAGATTGTAGATGG-AAAGCCGGGTAAGTA 302
Query 309 TATATGGCAAACTTACAAAGAAGTATATGATGTAGTGATTAAGCTTGGAAACTCTATCAG 368
| | |||||||| ||| ||||||| || || | || || || |||||||| ||| ||||
Sbjct 303 TGTCTGGCAAACATACCAAGAAGTCTACGACATTGTCATGAAACTTGGAAATTCTCTCAG 362
Query 369 AACTATTGGAGTTGGAA--AAGGAGCGAAATGCGGTATTTATGGCGCCAATAGTCCTGAA 426
|| | |||||||| || | | ||| ||||| ||||| ||||| || ||| ||||||
Sbjct 363 AAGTGTTGGAGTT--AAGGACGAAGCAAAATGTGGTATCTATGGTGCAAATTCTCCTGAG 420
Query 427 TGGATTATAAGCATGGAGGCTTGCAATGCTCATGGACTCTACTGTGTACCTTTATATGAC 486
|||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||||
Sbjct 421 TGGATTATCAGCATGGAGGCTTGTAATGCACATGGACTCTATTGTGTACCGTTATATGAT 480
Query 487 ACTCTAGGTGCTGGA-GCAATAGAATTCATCATTTGTCATGCAGAAGTCTCACTCG-CTT 544
|| ||||||||| || || | ||||||||||||| ||| |||| || ||| | | |||
Sbjct 481 ACACTAGGTGCT-GATGCTGTGGAATTCATCATTTCCCATTCAGAGGTTTCAATTGTCTT 539
Query 545 TCTCTGAGGAGaaaaaaaTCTCTGAGTTATTGTTGACA-GCTCCAAAATCAACTAGA-TA 602
| | || ||||| || ||||||||||| || |||| || ||||| || || ||| ||
Sbjct 540 TGT-GGAAGAGAAGAAGATCTCTGAGTTGTTCAAGACATGC-CCAAACTCGAC-AGAGTA 596
Query 603 TTTGAAGAA-TATTGTGAGCTTTGGTGAGGT-T-ACAAATGGTCAAAGAGCAGAAGCTGA 659
|||| || | |||||||||| || | ||| | || || |||| || |||||||||
Sbjct 597 CATGAA-AACTGTTGTGAGCTTCGG-G-GGTGTCTCACGTGAACAAAAAGAAGAAGCTGA 653
Query 660 GAGGCATGGATTAACAATATATTCATGGGACCAATTCTTGAAGCTAGGTGAGGGTAAA-C 718
| ||| || |||||| | ||||| |||| |||||||| ||||| || ||| |
Sbjct 654 AACTTTTGGGTTGGTTATATATGCTTGGGATGAATTTTTGAAGCTGGGTGAAGG-AAAGC 712
Query 719 ATTATGAAT-TACC-A-GAGAAGAGAAGCAGCGATATTTGCACCATCATGTATACAAGTG 775
| |||| || | || | | || |||| ||||| |||||||| || |||||||| ||||
Sbjct 713 AATATG-ATCTCCCAATCA-AAAAGAA-AAGCGACATTTGCACGATTATGTATACGAGTG 769
Query 776 GCACAACTGGTGATCCTAAA-GGAGTCTTGCTTA-CAAATGAGAGCATTATCCA-TCTAC 832
| || |||||||| || ||| ||||| || || | || || |||||| | | ||||
Sbjct 770 GAACCACTGGTGA-CCCAAAGGGAGTGATG-ATATCTAACGAAAGCATTGT-GACTCTAA 826
Query 833 TTGAAGGTGTTAAAAAAT-TGCTTAAATCT-ATAAATGAAGAG-T-TAACCAGT-AAAGA 887
| | || | | | | | || ||| | | || | || | | | | | || |||||
Sbjct 827 TCGCTGGAG-TGATCCGTCTACTGAAAAGTGCT-AACG-AG-GCTCTGA-CTGTGAAAGA 881
Query 888 TGTTTATCTCTCATATCTACCTCTGGCTCATATCTTCGATCGCGTGATTGAGGAGCTGTG 947
||| ||||| || ||||| ||||| || || ||||| || || || || |||||| |||
Sbjct 882 TGTGTATCTTTCTTATCTTCCTCTTGCCCACATCTTTGACCGAGTTATCGAGGAG-TGT- 939
Query 948 TAT-ATCTGAAGCA--G-CCT-CTATCGGATTCTGGCGAGGGGATGTTAAGA-TATTGAT 1001
| | || | || || | || | || || |||||||||||||||| ||| | | |||||
Sbjct 940 T-TCAT-TCAA-CATGGTGCTGCAATTGGCTTCTGGCGAGGGGATG-TAAAATTGTTGAT 995
Query 1002 AGAAGACATTGCT--GCATTGAAACCGACTGTTTTCTGCGCTGTTCCTCGCGTGCTAGAG 1059
|||||| ||||| || || ||||| ||| |||| || ||||| ||||| || || ||
Sbjct 996 CGAAGACCTTGCTGAGC-TT-AAACCAACTATTTTTTGTGCTGTACCTCGTGTCCTGGAT 1053
Query 1060 AGAATTTACACCGGTCTTCAGCAGAAACTTTCTGATGGTGGTTTCATAAAGAAG-AAATT 1118
||| | ||| | ||||||||| |||| |||||||||||||| ||| |||| ||| | |
Sbjct 1054 AGAGTATACTCAGGTCTTCAGAAGAAGCTTTCTGATGGTGGATTCTTAAAAAAGTTCA-T 1112
Query 1119 ATTCAACTT-TGCATTCAACTACAAACATAAAAACATGACGAAAGGG-CAGCCTCATGAA 1176
||| | || |||||| ||| ||| | | |||| | ||||| ||| ||||||
Sbjct 1113 ATTTGA-TTCTGCATTTTCCTATAAATTTGGTTATATGAAG-AAGGGACAGTCTCATGTG 1170
Query 1177 CAAGCATCTCCAATGGCTGACAGAGTTGTATTTAAAAAGGTAAAAGAAGGGTTGGGAGGA 1236
| || |||||| | ||||| | |||| || | ||||| ||| |||| | |||||
Sbjct 1171 GAGGCCTCTCCACTTTTTGACAAACTTGTGTTCAGCAAGGTTAAACAAGGACTCGGAGGC 1230
Query 1237 AACGTGCGTCTGATCCTCTCAGGAGCAGCTCCTCTTGC-AGCTCACATCGAATC-TTTCC 1294
|| ||| | | || || || ||||| ||||||||||| || |||| | || || ||| |
Sbjct 1231 AATGTGAGGATTATTCTATCTGGAGCTGCTCCTCTTGCTAG-TCACGTAGAGTCATTT-C 1288
Query 1295 TTCGAGTTGTCGCGTG-TGCTCATGTTTTGCAAGGATACGGTCTAACAGAGAGTTGTGGT 1353
| |||| || || || || ||||||| | |||||||||||||| || || || |||| |
Sbjct 1289 TAAGAGTGGTGGCATGCTG-TCATGTTCTCCAAGGATACGGTCTTACTGAAAGCTGTGCT 1347
Query 1354 GGCACTTTTGTGTC-CATTCCAAATGAGCTTGCAATGCTTGGAACGGTTGGTCCACCGGT 1412
|| |||||||| || | | ||| |||| || | ||||| || || ||||||||||| ||
Sbjct 1348 GGAACTTTTGTCTCGC-TGCCAGATGAACTAGGTATGCTCGGCACAGTTGGTCCACCAGT 1406
Query 1413 TCCTAACGTTGACATAAGGCTCGAGTCAGTTCCAGAGATGGGTTATGACGCTCTTGCAAG 1472
|| |||||||| ||| | || || || || || ||||||| ||||| |||||||| ||
Sbjct 1407 GCCAAACGTTGATATACGCCTTGAATCCGTCCCCGAGATGGAATATGATGCTCTTGCGAG 1466
Query 1473 CAAC-CCACGTGGAGAGATTTGCA-TCAGAGGAAAGA-CTTTGTTCTCTGGATATTACAA 1529
|| ||||||| || || |||| || | ||||||| | || |||||||| || |||||
Sbjct 1467 -TACTGCACGTGGTGAAATCTGCATTC-GGGGAAAGACCCTT-TTCTCTGGTTACTACAA 1523
Query 1530 ACGTGAAGATCTCACTCAAGAAGTCCTCATTGATGGTTGGCTTCATACTGGTGATGTTGG 1589
||||||||||||||| |||| || ||||||||||| ||||| || || |||||||||||
Sbjct 1524 ACGTGAAGATCTCACGAAAGAGGTTCTCATTGATGGATGGCTGCACACAGGTGATGTTGG 1583
Query 1590 TGAGTGGCAACCAGATGGA-GCCATGAAGATAATCGATC-GCAAGAAGAACATCTTTAAA 1647
||||||||||||||||||| || ||||||||||| || | | |||||||| |||||||||
Sbjct 1584 TGAGTGGCAACCAGATGGAAGC-ATGAAGATAATTGA-CAGGAAGAAGAATATCTTTAAA 1641
Query 1648 CTGTCTCAAGGAGAATACGTTGCGGTTGAGAACTTGGAGAACATATACAGTCATGT-CGC 1706
|| || |||||||| || |||||||| |||||| | || ||||||||| || | || |
Sbjct 1642 CTCTCACAAGGAGAGTATGTTGCGGTGGAGAACATAGAAAACATATACGGTGAAGTACAA 1701
Query 1707 GGCCATTGAATC-GCTATGGGTATATGGAAACAGCTATGAGTC-TTACTTAGTGGCTGTG 1764
| | |||| || | | ||||| || || ||||||| |||||| || || | | ||| |
Sbjct 1702 G-CTGTTGATTCCG-TGTGGGTGTACGGTAACAGCTTTGAGTCCTTCCTAA-TAGCTATC 1758
Query 1765 GT-ATGTCCAAGCAAG-AT-TCAGATTGAACATTGGGCCAAAGAACACAGTGTTTCAGGA 1821
| | |||| | || || || |||||| ||||| |||| || |||| ||
Sbjct 1759 GCCAAC-CCAAACCAGCATATCC--TTGAACGCTGGGCTGCAGAAAACGGTGTGAGTGGT 1815
Query 1822 GACTTTGA-GTCTATCTGTCGAAACCAAAAGACTAAAG-AGTTTATCCTTGGAGAA-TTC 1878
|||| ||| | || |||||| ||| ||||| | |||| | || || || |||||| ||
Sbjct 1816 GACTATGACG-CTCTCTGTCAAAATGAAAAGGC-AAAGGAATTCATTCTCGGAGAACTTG 1873
Query 1879 --AACAGAGTAGCCAAAGACAAAAAGCTGAA-GGGATTTGAGCTGATCAAAGATG-TTCA 1934
|| | | | |||||||| |||||| |||| ||| || ||| | ||||| | | ||||
Sbjct 1874 TTAA-A-A-TGGCCAAAGAGAAAAAGATGAAAGGG-TTCGAGATCATCAAGGC-GATTCA 1928
Query 1935 T-TTGGACACGGTACCGTTCGACATGGAAAGAGATCT-CATCACACCTTC-TTACAAGAA 1991
| ||| || | || || || ||||||||| ||||||| | | || || | || ||| ||
Sbjct 1929 TCTTG-ACCCAGTGCCATTTGACATGGAACGAGATCTTCTT-ACGCCGACCTT-CAAAAA 1985
Query 1992 GAAAAGGCCTCAGCTT-CTCAAGTACTATCAGAAAGAGATTGATAAAATGTA 2042
||||||||||||| || || || ||||| |||| | ||| || |||||||
Sbjct 1986 GAAAAGGCCTCAG-TTGCTGAAATACTACCAGAGTGTGATCGACGAAATGTA 2036
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 112750424070
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5