BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474922
Length=2609
Score E
Sequences producing significant alignments: (Bits) Value
AT1G64300.1 | Symbols: | Protein kinase family protein | chr1:... 3744 0.0
AT5G41730.1 | Symbols: | Protein kinase family protein | chr5:... 1962 0.0
> AT1G64300.1 | Symbols: | Protein kinase family protein | chr1:23863095-23866045
FORWARD LENGTH=2696
Length=2696
Score = 3744 bits (2027), Expect = 0.0
Identities = 2314/2448 (95%), Gaps = 37/2448 (2%)
Strand=Plus/Plus
Query 20 GAGACAGCGAAAACCTTTGGGaaaaaaaaTTTAGAAGCAACCCAAAAGAGAAGAGAAGAA 79
|||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||
Sbjct 1 GAGACAGCGAAAACCTGTGGGGAAAAAATTTTAGAAGCAACCCAAAAGAGAAGAGAAGAA 60
Query 80 A-TT-CTTCTTCTTAGCtttttttCTCTCTCTTTTGAAGCTTCTTCTGATTCAAAGTTTT 137
| || ||||| || || | |||||||||||||||||||||||||||||||||||||
Sbjct 61 ATTTATTTCTT-TT-TCTCCCTCTCTCTCTCTTTTGAAGCTTCTTCTGATTCAAAGTTTT 118
Query 138 --A--CAGGTTGGAGAAGATTGTTGATCTTTT-G---G-TT-GA--A--C---CATATGA 180
| |||||||||||||||||||||| |||| | | || || | | | |||||
Sbjct 119 ACAGTCAGGTTGGAGAAGATTGTTGATGTTTTGGTTTGATTCGATTAGTCAATCCTATGA 178
Query 181 TTTCATATATTCCAAGAGAATTCATCGATCCTTGAACaaaaaaaaaGATCTTCATTTCAG 240
||||||||||||||||||||||||| |||||||||| |||| || ||||||||||||||
Sbjct 179 TTTCATATATTCCAAGAGAATTCATAAATCCTTGAACCAAAATAAGGATCTTCATTTCAG 238
Query 241 GTTT-TTGA-ATACTTGACAAGCAAGCCTGT-A-ATGTGATGGAGCAATTCAGGCAAATC 296
||| | || | | ||| || |||||||| | ||||||||||||||||||||||||||
Sbjct 239 CTTTCTAGAGA-AATTG---AGAAAGCCTGTGATATGTGATGGAGCAATTCAGGCAAATC 294
Query 297 GGAGAGGTTCTTGGAAGTTTAAACGCGCTAATGGTATTACAAGACGATATCTTAATCAAC 356
||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct 295 GGAGAGGTTCTAGGAAGCTTAAACGCGTTAATGGTATTACAAGACGATATCTTAATCAAC 354
Query 357 CAAAGACAATGTTGTTTGTTGTTAGATATTTTCAGTTTGGCTTTCAACACCGTAGCCGAA 416
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 355 CAAAGACAATGTTGTTTGTTGTTAGATATTTTCAGTTTGGGTTTCAACACCGTAGCCGAA 414
Query 417 GAGATCAGACACCACTTGAAGCTTGAAGAGAAGCATACTAAATGGAGAGCTCTTGAACAG 476
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 415 GAGATCAGACACAACTTGAAGCTTGAAGAGAAGCATACTAAATGGAGAGCTCTTGAACAG 474
Query 477 CCTTTGAGAGAGCTTTATCGAGTTTTTAAAGAAGGCGAAATGTATGTTCGGAATTGTATG 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 475 CCTTTGAGAGAGCTTTATCGAGTTTTTAAAGAAGGCGAAATGTATGTTCGGAATTGTATG 534
Query 537 TCTAATAAAGATTGGTGGGGTAAAGTTATCAACTTTCATCAGAACAAAGATTGTGTTGAG 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 535 TCTAATAAAGATTGGTGGGGTAAAGTTATCAACTTTCATCAGAACAAAGATTGTGTTGAG 594
Query 597 TTTCACATTCACAATTTGCTTTGTTACTTCTCGGCTGTGATCGAAGCCATCGAGACAGCG 656
||||| || || ||| ||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 595 TTTCATATACATAATCTGCTTTGTTACTTTTCGGCTGTGATCGAAGCCATCGAGACCGCG 654
Query 657 GGTGAGATTTCGGGTCTCGACCCTGCTGAGATGGAGAGGAGGAGAGTTGTGTTTTCAAGA 716
||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct 655 GGTGAGATTTCGGGTCTTGACCCTTCTGAGATGGAGAGGAGGAGAGTTGTGTTTTCAAGA 714
Query 717 AAGTATGATAGGGAGTGGAATGATCCCAAGCTGTTTCAGTGGAGGTATGGGAAACAGTAT 776
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 715 AAGTATGATAGGGAGTGGAATGATCCCAAGCTGTTTCAGTGGAGGTTTGGGAAACAGTAT 774
Query 777 TTGGTACCGAGGGATATTTGCATT-CGGTTCGAGCATTCTTGGAGAGAAGATAGGTGGAA 835
||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||
Sbjct 775 TTGGTACCGAGGGATATTTGC-TTACGGTTCGAGCATTCGTGGAGAGAAGATAGGTGGAA 833
Query 836 TCTAGTGGAGGCATTGCAAGAGAAGAGGAAGTCCAAGAGCGATGAGATTGGGAAGACTGA 895
||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 834 TCTCGTTGAGGCATTGCAAGAGAAGAGGAAGTCCAAGAGCGATGAGATTGGCAAGACTGA 893
Query 896 GAAGCGTTTAGCTGATTTTCTGTTGAAGAAACTAACTGGATTGGAACAGTTTAACGGTAA 955
|||||||||||||||||||||||||||||||||||| ||| | ||||||||||| |||||
Sbjct 894 GAAGCGTTTAGCTGATTTTCTGTTGAAGAAACTAACGGGACTAGAACAGTTTAATGGTAA 953
Query 956 GCTCTTCCCGAGTTCGATACTTGTTGGTTCTAAGGATTACCAAGTGAGGCGGAGATTAGG 1015
||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 954 GCTCTTCCCCAGTTCGATACTTGTTGGTTCTAAGGATTACCAAGTGAGGAGGAGATTAGG 1013
Query 1016 TGGTGGTGGTCAGTACAAGGAGATTCAATGGTTAGGGGATAGTTTTGTGTTGAGACATTT 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1014 TGGTGGTGGTCAGTACAAGGAGATTCAATGGTTAGGGGATAGTTTTGTGTTGAGACATTT 1073
Query 1076 TTTCGGGGATCTTGAGCCGTTGAATGCAGAGATTTCTTCTCTGTTATCGCTTTGTCATTC 1135
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1074 TTTCGGTGATCTTGAGCCGTTGAATGCAGAGATTTCTTCTCTGTTATCGCTTTGTCATTC 1133
Query 1136 GAATATACTTCAGTACCTTTGTGGATTCTATGATGAAGAAAGGAAAGAATGTTCTCTGGT 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1134 GAATATACTTCAGTACCTTTGTGGATTCTATGATGAAGAAAGGAAAGAATGTTCTCTTGT 1193
Query 1196 TATGGAGTTAATGCACAAAGATTTGAAAAGCTACATGAAGGAGAATTGTGGACCTAGAAG 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1194 TATGGAGTTAATGCACAAAGATTTGAAAAGCTACATGAAGGAGAATTGTGGACCTAGAAG 1253
Query 1256 AAGGTATCTTTTCTCTGTTCCCGTTGTGATCGATATAATGCTTCAAATCGCGAGAGGGAT 1315
||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1254 AAGATATCTTTTCTCTGTTCCCGTTGTTATCGATATAATGCTTCAAATCGCGAGAGGGAT 1313
Query 1316 GGAATATCTTCATTCTAATGAGATTTTCCATGGAGATTTGAATCCCATGAACATTCTTTT 1375
||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1314 GGAGTATCTTCATTCAAATGAGATTTTCCATGGAGATTTGAATCCAATGAACATTCTTTT 1373
Query 1376 GAAAGAGAGAAGTCACACCGAAGGTTATTTCCACGCGAAAATCTCAGGTTTCGGCTTGAC 1435
||||||||||||||||||||||||||| ||||||||||||||||| |||||||| || ||
Sbjct 1374 GAAAGAGAGAAGTCACACCGAAGGTTACTTCCACGCGAAAATCTCGGGTTTCGGTTTAAC 1433
Query 1436 CTCAGTTAAAAATCAGTCATTTTCTCGGGCTTCCTCTAGACCAACCACACCCGATCCTGT 1495
||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 1434 CTCAGTTAAGAATCAGTCTTTTTCTCGGGCTTCCTCTAGACCAACCACACCTGATCCTGT 1493
Query 1496 AATATGGTATGCACCTGAAGTTCTAGCAGAGATGGAACAAGATCTCAAAGGTACAACTCC 1555
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1494 AATATGGTATGCACCTGAAGTTCTAGCAGAGATGGAACAAGATCTCAAAGGTACAGCTCC 1553
Query 1556 GAGATCGAAGTTTACACATAAAGCTGATGTTTATAGCTTTGCTATGGTGTGTTTCGAGCT 1615
||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 1554 AAGATCAAAGTTTACACATAAAGCTGATGTCTATAGCTTTGCTATGGTGTGTTTTGAGCT 1613
Query 1616 TATAACCGGTAAAGTTCCATTTGAAGATGACCATCTTCAAGGCGAGAAAATGGCTAAGAA 1675
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1614 TATAACCGGTAAAGTTCCATTTGAAGATGACCATCTTCAAGGCGATAAAATGGCTAAGAA 1673
Query 1676 CATAAGAACGGGAGAGAGACCTCTCTTCCCATTCCCTTCGCCAAAATACCTCGTTAGTCT 1735
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 1674 CATAAGAACGGGAGAGAGACCTCTCTTCCCATTCCCTTCACCAAAATACCTTGTTAGTCT 1733
Query 1736 AATTAAACGGTGTTGGCATTCAGAACCGAGTCAGCGTCCAACATTCTCTTCGATATGCCG 1795
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1734 AATCAAACGGTGTTGGCATTCAGAACCGAGTCAGCGTCCAACATTCTCTTCGATTTGCCG 1793
Query 1796 GATCCTCCGCTACATCAAGAAATTCCTAGTTGTGAATCCGGATCACGGCCACCTCCAAAT 1855
||||||||||||||||||||| |||||||| ||||||||||| ||||| ||||| |||||
Sbjct 1794 GATCCTCCGCTACATCAAGAAGTTCCTAGTGGTGAATCCGGACCACGGTCACCTTCAAAT 1853
Query 1856 CCAAAACCCACTTGTTGATTGCTGGGACTTAGAAGCAAGATTCTTGAAAAAGTTCTCAAT 1915
||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1854 CCAAAACCCTCTAGTTGATTGCTGGGATTTAGAAGCAAGATTCTTGAAAAAGTTCTCAAT 1913
Query 1916 GGAGTCAGGTTCTCACGCAGGATCCGTGACACAAATACCATTCCAGCTCTACTCATACAG 1975
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 1914 GGAGTCAGGTTCTCACGCAGGATCAGTGACACAAATACCATTCCAGCTTTACTCATACAG 1973
Query 1976 GATTGCAGAGAAAGAGAAGATGAGTCCAAACTTTAACAAAGAAGAGAATTCAGAAACAGG 2035
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1974 GATTGCAGAGAAAGAGAAGATGAGTCCAAACTTTAACAAAGAAGAGAATTCAGATGCAGG 2033
Query 2036 GGAATCTGTTTCTGAAGGTGTTTCAGTGGTTGAAGATCCACCAACAA---TGCCAATGTA 2092
|||||||||||||||| |||||||||| |||||||| |||||||||| ||||||||||
Sbjct 2034 GGAATCTGTTTCTGAAAGTGTTTCAGTAGTTGAAGAGCCACCAACAACAATGCCAATGTA 2093
Query 2093 TACAAAGTCATTGTGCTTAGATGCAATATCTGAATACTCAGATATAAGATCAGTTTACTC 2152
||| |||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct 2094 TACTAAGTCATTATGCTTAGATGCAATATCTGAATACTCAGATACAAGATCAGTCTACTC 2153
Query 2153 AGAAGCTCCAATCAAAAAGACATCAGCTTTAAAGAAAAGTGGTGACACCATAAAAAACAG 2212
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2154 AGAAGCTCCAATCAAAAAGACATCAGCTTTAAAGAAAAGTGGTGACACCATCAAAAACAG 2213
Query 2213 AAGAAACTCAATCTCAGGTTTACGGTCTCCAGGATCATCGCCTATAAAACCGAGATCAAC 2272
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2214 AAGAAATTCAATCTCAGGTTTAAGGTCTCCAGGATCATCGCCTATAAAACCGAGATCAAC 2273
Query 2273 ACCGAAAGTGTCATCACCACTAAGTCCATTTGGAAGAAGCAGCAGCAA-A--GCAAGGAA 2329
||| ||||| |||||||||||||||||||||||||||||||||||||| | |||| ||
Sbjct 2274 ACCTAAAGTATCATCACCACTAAGTCCATTTGGAAGAAGCAGCAGCAACAAAGCAAACAA 2333
Query 2330 GGATACAAGATTGCCTTTGAGTCCTATGAGTCCTTTGAGCCATGGAAGACGTAGACAACT 2389
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2334 GGATACAAGATTGCCTTTGAGTCCTATGAGTCCACTGAGCCATGGAAGACGTAGACAACT 2393
Query 2390 CACTGGTCCTGCTTCAGACTCTGAGCTTACATAGCTTTGAAACACACA 2437
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2394 AACTGGTCCTGCTTCAGACTCTGAGCTTACATAGCTTTGAAACACACA 2441
> AT5G41730.1 | Symbols: | Protein kinase family protein | chr5:16684914-16687145
REVERSE LENGTH=2136
Length=2136
Score = 1962 bits (1062), Expect = 0.0
Identities = 1831/2191 (84%), Gaps = 98/2191 (4%)
Strand=Plus/Plus
Query 276 ATGGAGCAATTCAGGCAAATCGGAGAGGTTCTTGGAAGTTTAAACGCGCTAATGGTATTA 335
|||||||||||||| ||||||||||| |||||||||||| |||| || ||||||||||||
Sbjct 1 ATGGAGCAATTCAGACAAATCGGAGAAGTTCTTGGAAGTCTAAATGCACTAATGGTATTA 60
Query 336 CAAGACGATATCTTAATCAACCAAAGACAATGTTGTTTGTTGTTAGATA-TTTTCAGTTT 394
||||| |||||||| |||||||||||||||||||||||||||||||| | | ||||| ||
Sbjct 61 CAAGATGATATCTTGATCAACCAAAGACAATGTTGTTTGTTGTTAGA-ACTCTTCAGCTT 119
Query 395 GGCTTTCAACACCGTAGCCGAAGAGATCAGACACCACT-TGAAGCTTGAAGAGAAGCATA 453
||||||||||| || || |||||||||||||| | | | |||||||||||||||||||
Sbjct 120 AGCTTTCAACACGGTCGCAGAAGAGATCAGACA-GAATCTAAAGCTTGAAGAGAAGCATA 178
Query 454 CTAAATGGAGAGCTCTTGAACAGCCTTTGAGAGAGCTTTATCGAGTTTTTAAAGAAGGCG 513
|||||||||||||||||||||| ||||| || ||||||||| |||||||||||||||| |
Sbjct 179 CTAAATGGAGAGCTCTTGAACAACCTTTAAGGGAGCTTTATAGAGTTTTTAAAGAAGGAG 238
Query 514 AAATGTATGTTCGGAATTGTATGTCTAATAAAGATTGGTGGGGTAAAGTTATCAACT-TT 572
| | |||||| | |||||||| ||||| ||||||||||||||||| ||||| | ||
Sbjct 239 AGTTATATGTTAAGCATTGTATGGATAATAGTGATTGGTGGGGTAAAGTAATCAA-TCTT 297
Query 573 CATCAGAACAAAGATTGTGTTGAGTTTCACATTCACAATTTGCTT-TGTTACTTCTCGGC 631
||||||||||||||||||||||||||||| || ||||| ||| || ||||| ||||| ||
Sbjct 298 CATCAGAACAAAGATTGTGTTGAGTTTCATATACACAACTTG-TTCTGTTATTTCTCTGC 356
Query 632 TG-TGATCGAAGCCATCGAGACAGCGGGTGAGATTTCGGGTCTCGACCCTGCTGAGATGG 690
| || | |||||||||||| | || ||||||||||||||||| |||||| |||||||||
Sbjct 357 GGTTG-TTGAAGCCATCGAGGCTGCTGGTGAGATTTCGGGTCTTGACCCTTCTGAGATGG 415
Query 691 AGAGGAGGAGAGTTGTGTTTTCAAGAAAGTATGATAGGGAGTGGAATGATCCCAAGCTGT 750
|||| |||||||||||||||||||||||||||||||| |||||||||||||| ||| |||
Sbjct 416 AGAGAAGGAGAGTTGTGTTTTCAAGAAAGTATGATAGAGAGTGGAATGATCCTAAGATGT 475
Query 751 TTCAGTGGAGGTATGGGAAACAGTATTTGGTAC-CGAGGGATATTTGCATTCGGTTCGAG 809
|||| ||||||| |||||||||||||||| | | |||| |||||||||| ||||| |||
Sbjct 476 TTCAATGGAGGTTTGGGAAACAGTATTTGCT-CTCGAGAGATATTTGCAGCCGGTTTGAG 534
Query 810 CATTCTTGGAGAGAAGATAGGTGGAATCTAGTGGAGGCATTGCAAGAGAAGAGGAAGTCC 869
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 535 CATTCTTGGAGAGAAGATAGATGGAATCTAGTGGAGGCATTGCAAGAGAAGAGGAAATCG 594
Query 870 AAGAGCGATGAGATTGGGAAGACTGAGAAGCGTTTAGCTGATTTTCTGTTGAAGAAACTA 929
| |||||||| ||||| || || |||||||||||||||||||| ||||||||||| ||
Sbjct 595 GATAGCGATGATATTGGTAAAACCGAGAAGCGTTTAGCTGATTTGCTGTTGAAGAAGTTA 654
Query 930 ACTGGATTGGAACAGTTTAACGGTAAGCTCTTCCCGAGTTCGATACTTGTTGGTTCTAAG 989
|| || ||||| |||||||||||||| || || || |||||||||||| ||||||| |||
Sbjct 655 ACCGGTTTGGAGCAGTTTAACGGTAAACTGTTTCCTAGTTCGATACTTCTTGGTTCAAAG 714
Query 990 GATTACCAAGTGAGGCGGA-GATTAGGTGGTGGTGGTCAGTACAAGGAGATTCAATGGTT 1048
|||||||| |||| | | | |||| || | ||| || ||||||||||||||||||||
Sbjct 715 GATTACCAGGTGAAG-AAACGGTTAGATGCAGATGGACAATACAAGGAGATTCAATGGTT 773
Query 1049 AGGGGATAGTTTTGTGTTGAGACATTTTTTCGGGGATCTTGAGCCGTTGAA-TGCAGAGA 1107
||| |||||||||| | || || |||||| | |||||||||||| | || | | || |
Sbjct 774 AGGTGATAGTTTTGCACTAAGGCACTTTTTCAGCGATCTTGAGCCGCT-AAGTTCTGAAA 832
Query 1108 TTTCTTCTCTGTTATCGCTTTGTCATTCGAATATACTTCAGTACCTTTGTGGATTCTATG 1167
| || ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 833 TCTCGTCTCTTTTAGCGCTTTGTCATTCGAATATACTTCAGTACCTTTGTGGATTCTATG 892
Query 1168 ATGAAGAAAGGAAAGAATGTTCTCTGGTTATGGAGTTAATGCACAAAGATTTGAAAAGCT 1227
||||||||||||||||||||| | ||||||||||||| ||||||||||||||| | ||||
Sbjct 893 ATGAAGAAAGGAAAGAATGTTTTTTGGTTATGGAGTTGATGCACAAAGATTTGCAGAGCT 952
Query 1228 ACATGAAGGAGAATTGTGGACCTAGAAGAAGGTATCTT-TTCTCTGTTCCC-GTTGTGAT 1285
|||||||||||||||||||||| |||||||| ||| || ||||| | |||| || |||||
Sbjct 953 ACATGAAGGAGAATTGTGGACCAAGAAGAAGATAT-TTGTTCTC-GATCCCTGTGGTGAT 1010
Query 1286 CGATATAATGCTT-CAAATCGCGAGAGGGATGGAATATCTTCATTCTAATGAGATTTTCC 1344
||||| ||| || ||||| || || |||||||| ||||||||| ||||| || ||||
Sbjct 1011 TGATATCATG-TTGCAAATTGCAAGGGGGATGGAGTATCTTCATGGAAATGATATCTTCC 1069
Query 1345 ATGGAGATTTGAATCCCA-TGAACATTCTTTTGAAAGAGAGAAGTCACACCGAAGGTTAT 1403
|||||||||| || |||| ||||||||| | |||||||||| |||||||||||||||||
Sbjct 1070 ATGGAGATTTAAA-CCCAATGAACATTCATCTGAAAGAGAGGAGTCACACCGAAGGTTAC 1128
Query 1404 TTCCACGCGAAAATCTCAGGTTTCGGCTTGACCTCAGTTAAAAATCAGTCATTTTCTCGG 1463
||||| ||||| || | || ||||| || | || || | || || | | | |
Sbjct 1129 TTCCATGCGAAGATTTGTGGATTCGGTTT-A--TC--TTCAG--TC-GTTAAAG-CGCAG 1179
Query 1464 GCTTCCTCTAGACCAACCACACCCGATCCTGTAATATGGTATGCACCTGAAGTTCTAGCA 1523
||||||| | |||| ||| || ||||||||||||||||||||||||||||||||||||
Sbjct 1180 TCTTCCTCGAAACCAGGCACTCCTGATCCTGTAATATGGTATGCACCTGAAGTTCTAGCA 1239
Query 1524 GAGATGGAACAAGATCTCAAAGGTACAACTCCGAGATCGAAGTTTACACATAAAGCTGAT 1583
|||||||||||||| || || |||| |||||||| ||| ||||| || ||||||||||||
Sbjct 1240 GAGATGGAACAAGACCTGAATGGTAAAACTCCGAAATCTAAGTTGACGCATAAAGCTGAT 1299
Query 1584 GTTTATAGCTTTGCTATGGTGTGTTTCGAGCTTATAACCGGTAAAGTTCCATTTGAAGAT 1643
|| ||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 1300 GTGTATAGCTTTGCAATGGTGTGTTTTGAGCTTATAACAGGTAAAGTTCCATTTGAAGAT 1359
Query 1644 -GACCATCTTCAAGGCGAGAA-AATGGCTAAGAACATAAGAACGGGAGAGAGACCTCTCT 1701
| | |||||||||| || | |||| ||| || || |||| ||||||||||||||| |
Sbjct 1360 AGTC-ATCTTCAAGGTGA-ACCAATGACTATCAATATTAGAATGGGAGAGAGACCTCTTT 1417
Query 1702 TCCCATTCCCTTCGCCAAAATACCTCGTTAGTCTAATTAAACGGTGTTGGCATTCAGAAC 1761
|||| |||||||| |||||||||||||||||||| || ||||| |||||||| |||||||
Sbjct 1418 TCCCTTTCCCTTCACCAAAATACCTCGTTAGTCTGATCAAACGATGTTGGCACTCAGAAC 1477
Query 1762 CGAGTCAGCGTCC-AACATTCTCTTCGATATGCCGGATCCTCCGCTACATCAAGAAATTC 1820
||||||||||||| ||| |||||||||||||| ||||| || |||||||||||||| |||
Sbjct 1478 CGAGTCAGCGTCCTAAC-TTCTCTTCGATATGTCGGATACTACGCTACATCAAGAAGTTC 1536
Query 1821 CTAGTTGTGAATCCGGATCACGGCCA-CCTCCAAATCCAAAAC-CCACTTGTTGATTGCT 1878
|||||||||||||| ||||| || || |||| |||| |||| | |||||||||||||| |
Sbjct 1537 CTAGTTGTGAATCCAGATCATGGTCATCCTC-AAATGCAAA-CTCCACTTGTTGATTGTT 1594
Query 1879 GGGACTTAGAAGCAAGATTCTTGAAAAAGTTCTCAATG-GA-GTCAGGTTCTCACGCAG- 1935
|||||||||||||||| ||||||| |||||| || | | || | |||| |||||| | |
Sbjct 1595 GGGACTTAGAAGCAAGGTTCTTGAGAAAGTT-TCCAGGTGATG-CAGGGTCTCACACCGC 1652
Query 1936 GATCCGTGACA-CAAATACCATTCCAGCTCTACTCATACAGGATTGCAGAGAAAGAGAAG 1994
| || |||| | |||||||| ||||| || ||||||||| || || || |||||||||
Sbjct 1653 G-TCAGTGA-ATCAAATACCGTTCCAACTATACTCATACCGGGTTTTGGAAAAAGAGAAG 1710
Query 1995 ATGAGTCCAAACTTTAACAAAGAAGAGAATTCAGAAAC-AGGGGAATCTGTTTCTGAAGG 2053
|||| |||||||| || || ||| || | |||| || || | |||||| |||
Sbjct 1711 ATGAATCCAAACTC-AA-AA-GAA-AGC-T-CAGAGACTAGTG-AATCTGA-----AAGC 1758
Query 2054 TGTTTCAGTGGTTGAAGATCCACC-AA--CAATGC---CAAT-GTATACAAAGTCATTGT 2106
||||||||||||||||||||||| || | ||| ||| | |||||||||||||||
Sbjct 1759 -GTTTCAGTGGTTGAAGATCCACCTAATGCCATGATTACAAGAG-ATACAAAGTCATTGT 1816
Query 2107 G-CTTAGATGCAATATCTGAATACTCAGATATAAGATCAGTTTACTCAGAAGCTCCAATC 2165
| ||| ||| ||||||||||||||||||||| ||||||||| ||||| |||||||| ||
Sbjct 1817 GTCTT-GATACAATATCTGAATACTCAGATACAAGATCAGTCTACTCGGAAGCTCCCATG 1875
Query 2166 AAAAAGA-CATCAGCTTTAAAGAAAAGTGGTGACACCATAAAAAACAGAAGAAACTC-AA 2223
|||||| | |||||| |||||||||| || || | ||| |||||||| || ||
Sbjct 1876 AAAAAGGTC-TCAGCTCTAAAGAAAAGCGGCGAAATGGCAAAGCTCAGAAGAAG-TCCAA 1933
Query 2224 TCTCAGGTTTACG----GTC----TC--CAGGATCATCGCCTATAAAACCGAGATCAACA 2273
|| ||||| | | || || ||||| | || | ||||| | |||||| |
Sbjct 1934 GCTTAGGTTCA-GAAAAGTTGAGATCGGCAGGAACTTCAACGGTAAAAGCAAGATCATCG 1992
Query 2274 CCGAAAGTGTCATCACCACTAAGTCCATTTGGAAGAAGCAGCAGCAAAGCAAGGAAGGAT 2333
|| ||||| ||||||||| ||||||||||||||||||| | || ||||||||||||
Sbjct 1993 CCAAAAGT---ATCACCACTGAGTCCATTTGGAAGAAGCATTA--AA-GCAAGGAAGGAT 2046
Query 2334 ACAA-GATTGCCTTTGAGTCCTATGAGTCCTTTGAGCCATGGAAGACGTAGACAACTCAC 2392
| | |||||||||||||||| ||||||||||| | || ||||| ||||||||||| ||
Sbjct 2047 A-ATCGATTGCCTTTGAGTCCAATGAGTCCTTTAACCCCTGGAATACGTAGACAACAGAC 2105
Query 2393 TGGTCCTGCTTCAGACTCTGAGCTTACATAG 2423
||||| ||||||||||||||||||||| |||
Sbjct 2106 TGGTCATGCTTCAGACTCTGAGCTTACTTAG 2136
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 129531046826
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5