BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474944
Length=2845
Score E
Sequences producing significant alignments: (Bits) Value
AT1G64110.2 | Symbols: | P-loop containing nucleoside triphosp... 4405 0.0
AT5G52882.1 | Symbols: | P-loop containing nucleoside triphosp... 571 1e-161
> AT1G64110.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:23796719-23801725
REVERSE LENGTH=2886
Length=2886
Score = 4405 bits (2385), Expect = 0.0
Identities = 2728/2886 (95%), Gaps = 53/2886 (2%)
Strand=Plus/Plus
Query 1 AGCGATCaaaaaaatcttcataaaaaaaaaCCCTAAATCTCTCATATCCGCCGCCGTCTT 60
||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct 6 AGCGATCAAAAAAATCTTCAT-TAAAAGAACCCTAAATCTCTCATATCCGCCGCCGTCTT 64
Query 61 TGCCTCATTTTCAACACCGGTGATGACGTGTAAATAGATCTGTTTTTCACGGTTCTCACT 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 65 TGCCTCATTTTCAACACCGGTGATGACGTGTAAATAGATCTGGTTTTCACGGTTCTCACT 124
Query 121 ACTCTCTGTGATTTTTCAGACTATTGAATCGTTAGGACCAAAATAAG-AGAAAGAAACTG 179
||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||
Sbjct 125 ACTCTCTGTGATTTTTCAGACTATTGAATCGTTAGGACCAAAACAAGTACAAAGAAACTG 184
Query 180 CAGAAAGaaaaaaaTTTGAGAGAGATATCTTAC---A-AA-A-C------A-AGCAAACA 226
||| ||| |||| |||||||||||||||||||| | || | | | ||||||||
Sbjct 185 CAG-AAG-AAAAGATTTGAGAGAGATATCTTACGAAACAAGATCAAATGGACAGCAAACA 242
Query 227 GATGTTGTTATCGGCGCTCGGCGTCGGTGTTGGAGTCGGTGTGGGTTTGGGCTTGGCTTC 286
||||||||| |||||||| |||||||| |||||||| ||||||||||| |||||||||||
Sbjct 243 GATGTTGTTGTCGGCGCTTGGCGTCGGAGTTGGAGTAGGTGTGGGTTTAGGCTTGGCTTC 302
Query 287 GGGTCAAGCCGTCGGAAAATGGGCCGGCGGGAACTCATCGTCAAGTAACGCCGTCACGGC 346
||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct 303 TGGTCAAGCCGTCGGAAAATGGGCCGGCGGGAACTCGTCGTCAAATAACGCCGTCACGGC 362
Query 347 GGATAAGATGGAGAAGGAGATACTTCGTCAAGTTGTTGACGGCAGAGAGAGTAAAATTAC 406
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 363 GGATAAGATGGAGAAGGAGATACTCCGTCAAGTTGTTGACGGCAGAGAGAGTAAAATTAC 422
Query 407 TTTCGACGAGTTTCCTTATTATCTCAGTGAACAAACACGAGTGCTTCTAACAAGTGCAGC 466
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 423 TTTCGATGAGTTTCCTTATTATCTCAGTGAACAAACACGAGTGCTTCTAACAAGTGCAGC 482
Query 467 TTATGTCCATTTGAAGCACTTTGATGCTTCGAAATATACCAGAAACTTGTCTCCAGCTAG 526
||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct 483 TTATGTCCATTTGAAGCACTTCGATGCTTCAAAATATACGAGAAACTTGTCTCCAGCTAG 542
Query 527 CCGAGCCATTCTCTTGTCCGGCCCTGCCGAGCTTTACCAACAAATGCTAGCCAAAGCCCT 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 543 CCGAGCCATTCTCTTGTCCGGCCCTGCCGAGCTTTACCAACAAATGCTAGCCAAAGCCCT 602
Query 587 AGCTCATTTCTTCGACGCCAAGTTACTTCTTCTAGACGTCAACGATTTTGCACTCAAGAT 646
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 603 AGCTCATTTCTTCGATGCCAAGTTACTTCTTCTAGACGTCAACGATTTTGCACTCAAGAT 662
Query 647 ACAGAGCAAATATGGCAGTGGAAATACAGAATCGTCTTCATTCAAGAGATCTCCCTCAGA 706
|||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 663 ACAGAGCAAATACGGCAGTGGAAATACAGAATCATCGTCATTCAAGAGATCTCCCTCAGA 722
Query 707 ATCTGCTTTAGAGAAACTATCAGGACTGTTTAGTTCCTTCTCCATCCTTCCTCAGAGAGA 766
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 723 ATCTGCTTTAGAGCAACTATCAGGACTGTTTAGTTCCTTCTCCATCCTTCCTCAGAGAGA 782
Query 767 AGAGTCAAAAGCTGGTGGTACCTTGAGGAGGCAAAGCAGTGGTGTGGATATCAAATCAAG 826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 783 AGAGTCAAAAGCTGGTGGTACCTTGAGGAGGCAAAGCAGTGGTGTGGATATCAAATCAAG 842
Query 827 TTCAATGGAAGGCTCTAGTAATCCTCCAAAGCTTCGTCGAAACTCTTCAGCAGCAGCTAA 886
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 843 CTCAATGGAAGGCTCTAGTAATCCTCCAAAGCTTCGTCGAAACTCTTCAGCAGCAGCTAA 902
Query 887 TATTAGCAACCTTGCTTCTTCATCAAATCAAGTTTCAGCGCCTTTGAAGCGTAGTAGCAG 946
||||||||||||||| ||||| |||||||||||||||||||||||||| || ||||||||
Sbjct 903 TATTAGCAACCTTGCATCTTCCTCAAATCAAGTTTCAGCGCCTTTGAAACGAAGTAGCAG 962
Query 947 TTGGTCATTCGATGAAAAGCTTCTCATCCAATCTTTGTATAAGGTCTTGGCCTATGTCTC 1006
||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct 963 TTGGTCATTCGATGAAAAGCTTCTCGTCCAATCTTTATATAAGGTCTTGGCCTATGTCTC 1022
Query 1007 CAAGGCGAATCCGATTGTGTTATATCTTCGAGACGTTGAGAACTTTCTGTTCCGCTCACA 1066
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1023 CAAGGCGAATCCGATTGTGTTATATCTTCGAGACGTCGAGAACTTTCTGTTCCGCTCACA 1082
Query 1067 GAGAACTTACAACTTGTTCCAAAAGCTTCTCCAGAAGCTCAGTGGACCGGTCCTCATTCT 1126
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 1083 GAGAACTTACAACTTGTTCCAGAAGCTTCTCCAGAAACTCAGTGGACCGGTCCTCATTCT 1142
Query 1127 CGGTTCAAGAATCGTAGACTTGTCGAGTGAAGACGCTCAAGAAATTGATGAGAAGCTCTC 1186
|||||||||||| || |||||||| || ||||||||||||||||||||||||||||||||
Sbjct 1143 CGGTTCAAGAATTGTGGACTTGTCAAGCGAAGACGCTCAAGAAATTGATGAGAAGCTCTC 1202
Query 1187 TGCTGTTTTCCCGTACAATATCGACATACGACCGCCTGAGGATGAGACCCATCTAGTGAG 1246
|||||||||||| || |||||||||||| |||| |||||||||||||| |||||||||||
Sbjct 1203 TGCTGTTTTCCCTTATAATATCGACATAAGACCTCCTGAGGATGAGACTCATCTAGTGAG 1262
Query 1247 CTGGAAATCGCAGCTTGAACGCGACATGAACATGATCCAAACTCAGGACAATAGGAACCA 1306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1263 CTGGAAATCGCAGCTTGAACGCGACATGAACATGATCCAAACTCAGGACAATAGGAACCA 1322
Query 1307 TATCATGGAAGTTCTATCGGAGAATGATCTTATATGCGATGACCTCGAATCGATCTCTTT 1366
||||||||||||| | ||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 1323 TATCATGGAAGTTTTGTCGGAGAATGATCTTATATGCGATGACCTTGAATCCATCTCTTT 1382
Query 1367 TGAGGACACAAAGGTTTTAAGCAATTACATTGAAGAGATCGTTGTCTCTGCTCTTTCATA 1426
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1383 TGAGGACACGAAGGTTTTAAGCAATTACATTGAAGAGATCGTTGTCTCTGCTCTTTCCTA 1442
Query 1427 TCATCTAATGAACAACAAAGATCCTGAGTACAGAAACGGAAAACTGGTGATATCTTCTAC 1486
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1443 TCATCTGATGAACAACAAAGATCCTGAGTACAGAAACGGAAAACTGGTGATATCTTCTAT 1502
Query 1487 AAGTTTATCGCATGGATTCAGTCTCTTCAGAGAAGGCAAAGCGGGCGGTCGCGAGAAGCT 1546
|||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 1503 AAGTTTGTCGCATGGATTCAGTCTCTTCAGAGAAGGCAAAGCTGGCGGTCGTGAGAAGCT 1562
Query 1547 GAAGCAAAAAACTAAGGAAGAAAAATCCAAGGAACAAAAAGCTGAATTAGCGGCTGATAT 1606
|||||||||||||||||| ||| |||||||||| ||||||||||| | | ||
Sbjct 1563 GAAGCAAAAAACTAAGGAGGAATCATCCAAGGAAGTAAAAGCTGAAT---C-----A-AT 1613
Query 1607 TAAGCCGGAGACGAAACCAGAGAGTGTCACGGCCGCAAGCAGCAAGGAAGAACCAGAGAA 1666
||||||||||| ||| ||||||||||||| ||| ||||||||||||||||||||||||
Sbjct 1614 CAAGCCGGAGACAAAAACAGAGAGTGTCACCACCGTAAGCAGCAAGGAAGAACCAGAGAA 1673
Query 1667 AGAAACTAAAGCTGAGAAAGTTGCCCCAAAAGCTCCGGAAGTTGCACCGGATAACGAGTT 1726
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1674 AGAAGCTAAAGCTGAGAAAGTTACCCCAAAAGCTCCGGAAGTTGCACCGGATAACGAGTT 1733
Query 1727 TGAGAAACGGATAAGACCGGAAGTAATCCCAGCAGAAGAAATTAACGTCACATTCAAAGA 1786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1734 TGAGAAACGGATAAGACCGGAAGTAATCCCAGCAGAAGAAATTAACGTCACATTCAAAGA 1793
Query 1787 CATTGGTGCACTTGACGACATAAAAGAGTCACTTCAAGAGCTTGTAATGCTTCCTCTCCG 1846
|||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||
Sbjct 1794 CATTGGTGCACTTGACGAGATAAAAGAGTCACTACAAGAACTTGTAATGCTTCCTCTCCG 1853
Query 1847 TAGACCAGACCTATTCACAGGAGGTCTCTTGAAGCCCTGCAGGGGAATCCTACTCTTCGG 1906
||| |||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct 1854 TAGGCCAGACCTCTTCACAGGAGGTCTCTTGAAGCCCTGCAGAGGAATCTTACTCTTCGG 1913
Query 1907 TCCACCGGGTACAGGTAAAACAATGCTAGCTAAAGCCATTGCCAAAGAGGCAGGAGCGAG 1966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1914 TCCACCGGGTACAGGTAAAACAATGCTAGCTAAAGCCATTGCCAAAGAGGCAGGAGCGAG 1973
Query 1967 TTTTATAAACGTTTCCATGTCGACAATAACTTCGAAATGGTTTGGAGAAGACGAGAAGAA 2026
||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1974 TTTCATAAACGTTTCGATGTCAACAATAACTTCGAAATGGTTTGGAGAAGACGAGAAGAA 2033
Query 2027 TGTTAGGGCCTTGTTTACTCTAGCTTCGAAGGTGTCGCCAACCATTATATTTGTGGATGA 2086
||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 2034 TGTTAGGGCTTTGTTTACTCTAGCTTCGAAGGTGTCACCAACCATAATATTTGTGGATGA 2093
Query 2087 AGTTGATAGTATGTTGGGACAGAGAACAAGAGTAGGAGAACATGAAGCTATGAGAAAGAT 2146
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2094 AGTTGATAGTATGTTGGGACAGAGAACAAGAGTTGGAGAACATGAAGCTATGAGAAAGAT 2153
Query 2147 AAAGAATGAGTTTATGAGTCATTGGGATGGGTTAATGACTAAACCTGGTGAGCGTATCTT 2206
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2154 CAAGAATGAGTTTATGAGTCATTGGGATGGGTTAATGACTAAACCTGGTGAACGTATCTT 2213
Query 2207 AGTCCTTGCTGCTACGAATCGGCCTTTCGATCTAGACGAGGCCATTATCAGACGGTTCGA 2266
||||||||||||||| ||||||||||||||||| || || |||||||||||||| |||||
Sbjct 2214 AGTCCTTGCTGCTACTAATCGGCCTTTCGATCTTGATGAAGCCATTATCAGACGATTCGA 2273
Query 2267 ACGAAGGATCATGGTGGGACTACCGGCTGTAGAGAACAGAGAAAAGATTCTAAGGACATT 2326
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2274 ACGAAGGATCATGGTGGGACTACCGGCTGTAGAGAACAGAGAAAAGATTCTAAGAACATT 2333
Query 2327 GTTAGCGAAAGAGAAAGTAGACGAAAACTTGGATTACAAGGAACTAGCAATGATGACAGA 2386
||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2334 GTTGGCGAAGGAGAAAGTAGATGAAAACTTGGATTACAAGGAACTAGCAATGATGACAGA 2393
Query 2387 AGGATACACAGGAAGTGATCTCAAGAATCTGTGCACAACCGCTGCGTATAGGCCGGTgag 2446
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2394 AGGATACACAGGAAGTGATCTTAAGAATCTGTGCACAACCGCTGCGTATAGGCCGGTGAG 2453
Query 2447 agaacttatacagcaagagaggatcaaagacacagagaagaagaagcagagagagactac 2506
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2454 AGAACTTATACAGCAAGAGAGGATCAAAGACACAGAGAAGAAGAAGCAGAGAGAGCCTAC 2513
Query 2507 aaaagcgggtgaagaagatgaagggaaagaagagagagTTATAACACTTCGTCCGTTGAA 2566
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2514 AAAAGCAGGTGAAGAAGATGAAGGAAAAGAAGAGAGAGTTATAACACTTCGTCCGTTGAA 2573
Query 2567 CAGACAAGACTTTAAAGAAGCCAAGAACCAGGTGGCGGCGAGTTTTGCAGCGGAGGGAGC 2626
||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||
Sbjct 2574 CAGACAAGACTTTAAAGAAGCCAAGAATCAGGTGGCGGCGAGTTTTGCGGCTGAGGGAGC 2633
Query 2627 GGGAATGGGAGAGTTGAAGCAGTGGAATGAGTTGTATGGAGAAGGAGGATCGAGGAAGAA 2686
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2634 GGGAATGGGAGAGTTGAAGCAGTGGAATGAATTGTATGGAGAAGGAGGATCGAGGAAGAA 2693
Query 2687 AGAACAACTCACTTACTTCTTGTAATGATCATGATGA-TGA--AT-C----A-TG-ATTA 2736
||||||||||||||||||||||||||||| ||||||| | | || | | || ||||
Sbjct 2694 AGAACAACTCACTTACTTCTTGTAATGATGATGATGAATCATGATGCTGGTAATGGATTA 2753
Query 2737 TGAAATTTGGTAATGTAATAGTATGGTGGAttttt-tt-CCATGGTTAATAAGAGAATAA 2794
|||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||
Sbjct 2754 TGAAATTTGGTAATGTAATAGTATGGTGAATTTTTGTTTCCATGGTTAATAAGAGAATAA 2813
Query 2795 GAATA--A--A----G-T-----TT-GACCCGTATGTTTGGTCTTTCATTATGAAAGCAT 2839
||||| | | | | || |||||||||||||||||| ||||||||||| |||
Sbjct 2814 GAATATGATGATATTGCTAAAAGTTTGACCCGTATGTTTGGTCTGTCATTATGAAATCAT 2873
Query 2840 ACTATA 2845
||||||
Sbjct 2874 ACTATA 2879
> AT5G52882.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:21433879-21438659
REVERSE LENGTH=3063
Length=3063
Score = 571 bits (309), Expect = 1e-161
Identities = 817/1054 (78%), Gaps = 68/1054 (6%)
Strand=Plus/Plus
Query 1692 CCAAAAGCTCCGGAAGTTGCACCGGATAACGAGTTTGAGAAACGGATAAGACCGGAAGTA 1751
|||||||| || || |||| || ||||| ||||||||||| || |||||||| |||||
Sbjct 1756 CCAAAAGCACCTGAGGTTGTTCCTGATAATGAGTTTGAGAAGCGTATAAGACCAGAAGTT 1815
Query 1752 ATCCCAGCAGAA-GAAATTAACGTCACATTCAAAGACATTGGTGCACTTGACGACATAAA 1810
|| |||||| || || ||| || ||||| ||| |||||| | || ||||| | |||
Sbjct 1816 ATACCAGCA-AATGAGATTGGTGTGACATTTGCAGATATTGGTTCTCTAGACGAAACAAA 1874
Query 1811 AGAGTCACTTCAAGAGCTTGTAATGCTTCCTCTCCGTAGACCAGA-CCTATTCACAGGAG 1869
||| || |||||||| |||||||||||||| || | ||||| || | | |||| ||| |
Sbjct 1875 AGATTCGCTTCAAGAACTTGTAATGCTTCCACTTAGAAGACCGGATCTTTTTCA-AGGCG 1933
Query 1870 GTC-TCTTGAAGCCCTGCAGGGGAATCCTACTCTTCGGTCCACCGGGTACAGGTAAAACA 1928
||| || | ||||| || || ||||||||| | ||||||||||| ||||| || ||||||
Sbjct 1934 GTCTTC-TCAAGCCATGTAGAGGAATCCTATTATTCGGTCCACCTGGTACTGGCAAAACA 1992
Query 1929 ATGCTAGCTAAAGCCATTGCCAAA-GAGGCAGGAGCGAGTTTTATAAACGTTTCCATGTC 1987
||||| || ||||| |||| |||| || || ||||| ||||| || || || ||||||||
Sbjct 1993 ATGCTTGCAAAAGCAATTG-CAAATGAAGCTGGAGCTAGTTTCATCAATGTCTCCATGTC 2051
Query 1988 GACAATAACTTCGAAATGGTTTGGAGAAGACGAGAAGAATGTTAGGGCCT-TGTTTACTC 2046
||||| ||||| |||||||||||||||||||| |||||||| || | || ||||||||
Sbjct 2052 TACAATCACTTCAAAATGGTTTGGAGAAGACGAAAAGAATGTGAGAG-CTCTGTTTACTT 2110
Query 2047 TAGCTTCGAAGGTGTCGCCAACCATTATATTTGTGGATGAAGTTGATAGTATGTTGGGAC 2106
|||| | || || || ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2111 TAGCAGCTAAAGTATCTCCAACGATTATATTTGTGGATGAAGTTGATAGTATGTTGGGAC 2170
Query 2107 AGAGAACAAGAGTAGGAGAACATGAAGCTATGAGAAAGATAAAGAATGAGTTTATGAGTC 2166
| || |||||||| ||||| |||||||||||||| ||||| |||||||||||||||| |
Sbjct 2171 AAAGGACAAGAGTTGGAGAGCATGAAGCTATGAGGAAGATTAAGAATGAGTTTATGACAC 2230
Query 2167 ATTGGGATGGGTTAATGACTAAACCTGGTGAGCGTAT-CTTAGTCCTTGCTGCTACGAAT 2225
||||||||||| ||||||| ||||| ||||| | || || || ||||| || || ||
Sbjct 2231 ATTGGGATGGGCTAATGACGAAACCCGGTGAAAGGATTCTC-GTTCTTGCAGCGACAAA- 2288
Query 2226 CGG-CC-TTTCGATCTAGACGAGGCCATTATCAG-ACGGTTCGA-ACGAAGGATCATGGT 2281
| | || ||| ||||| || || || || || || | |||| || | |||| || |||||
Sbjct 2289 CAGACCGTTT-GATCTTGATGAAGCTATCATTAGGA-GGTTTGAGA-GAAGAATAATGGT 2345
Query 2282 GGGACTACCGGCTG-TAGAGAACAGAGAAAAGATTCTA-AGGACATTGTTAG-CGAAAGA 2338
|||||| || | | | |||| |||||| ||||| || || || ||||| | |||||||
Sbjct 2346 GGGACTTCCTTC-GATTGAGAGCAGAGAGAAGAT-CTTGAGAACTTTGTT-GTCGAAAGA 2402
Query 2339 GAAAGTAGACGAAAACTTGGATTACAAGGAACTAG--CAATGATGACAGAAGGATACACA 2396
|||| ||| ||| |||| ||| | | || || | || ||| |||||||| ||||
Sbjct 2403 GAAAACAGA-GAAT-CTTG-ATTTCCATGAGCTTGGGCA--GATAACAGAAGGCTACAGT 2457
Query 2397 GGAAGTGATCTCAAGAATCTG-TGCA-CAACCGCTGCGTATAGGCCGGTgagagaactta 2454
||||||||||||||||| || |||| || | ||||| ||||| || || ||||| || |
Sbjct 2458 GGAAGTGATCTCAAGAA-CTTATGCATCA-CAGCTGCTTATAGACCAGTTAGAGAGCTGA 2515
Query 2455 tacagcaagagaggatc-aaaga-cac-agag-aagaaga-agcagagag-ag-acta-- 2505
| ||||| || || || ||||| || |||| ||||||| || ||| || || | |
Sbjct 2516 TTCAGCAGGAAAG-ATTGAAAGATCAGGAGAGGAAGAAGAGAGAAGA-AGCAGGAAAAGG 2573
Query 2506 ca-a-aagcgggtgaagaagatgaagg-gaaa-----gaagagagagTTATAACACTTC- 2556
|| | ||| ||||||| |||| ||| || || |||||||| ||| ||
Sbjct 2574 CACAGAAGAATCAAAAGAAGAAGAAGCAGAAGCTTCTGAGGAAAGAGTTATTACA-TTGA 2632
Query 2557 GTCCGTTGAACA-GACAAGACTTTA-AAGAAGCCAAGAACC-AGGTGGCGGCGAGTTTTG 2613
| || ||||||| | ||||| | | || |||| || |||| |||| || ||||||||||
Sbjct 2633 GACCTTTGAACATGG-AAGACATGAGAA-AAGCTAA-AACCCAGGTAGCTGCGAGTTTTG 2689
Query 2614 CAGCGGAGGGAGCGGGAATGGGA-GAGTTGAAGCAGTGGAATGAGTTGTATGGAGAAGGA 2672
|| | || ||||| |||||| | ||| | ||||| |||||||| |||||||||||||||
Sbjct 2690 CATCAGAAGGAGCAGGAATGA-ATGAGCTAAAGCAATGGAATGATTTGTATGGAGAAGGA 2748
Query 2673 GGATCGAGGAAGAAAG-AACAACTCACTTACTTC 2705
|| || ||||| |||| |||| ||||||||||||
Sbjct 2749 GGCTCAAGGAA-AAAGGAACAGCTCACTTACTTC 2781
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 141370445374
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5