BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474949
Length=3845
Score E
Sequences producing significant alignments: (Bits) Value
AT1G64060.1 | Symbols: ATRBOH F, ATRBOHF, RBOHAP108, RBOHF, RBO... 5930 0.0
> AT1G64060.1 | Symbols: ATRBOH F, ATRBOHF, RBOHAP108, RBOHF, RBOH
F | respiratory burst oxidase protein F | chr1:23769774-23776931
FORWARD LENGTH=3941
Length=3941
Score = 5930 bits (3211), Expect = 0.0
Identities = 3663/3873 (95%), Gaps = 63/3873 (2%)
Strand=Plus/Plus
Query 1 aaaaaaaaaaaGTCCAATAATACTTTTT-AAAAAC-TTT-GTTGCATtaaaataaatatg 57
|||||||| || |||||||||||||||| | | ||| ||||||||||||||||| ||
Sbjct 91 AAAAAAAACAACTCCAATAATACTTTTTGATTTTCTTTTCGTTGCATTAAAATAAATGTG 150
Query 58 acaaaaatccaataatattactattataagttataaaaa---aattaacaaaaaaGGTAT 114
|||||||||||||||||||||||||||||||| ||||| || || |||||| ||||
Sbjct 151 GCAAAAATCCAATAATATTACTATTATAAGTTAAAAAAACTCAAAAAAAAAAAAAAGTAT 210
Query 115 ATTCCGTCAACTTTTTTCCACAGTCCGGTTCAAATCCTTCTCCATCATCGTTG--CTCTC 172
||||||||||| ||||| | ||||||||||| ||| | ||||||||||||||| |||||
Sbjct 211 ATTCCGTCAAC-TTTTT-CTCAGTCCGGTTC-AAT-CATCTCCATCATCGTTGATCTCTC 266
Query 173 TCTCTCCGTCAACGTTCTCTCTATAAAGCAGAGAGTTTCACAGCGCGTGAATAATGGTTT 232
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 267 TCTCTCCGTCAACGTTCTCTCTATAAAGCAGAGAGTTTCACAGCGCGTGAAAAATGGCTT 326
Query 233 TTCCCACTGAGCCACGACGACGCGTTTGAA--AT--A-ctctctctctctctctctctTT 287
|||||||| |||||| ||||||||||| || | | ||||| ||||||||||||||||
Sbjct 327 TTCCCACTTAGCCACAACGACGCGTTTCAATTCTCCATCTCTCCCTCTCTCTCTCTCTTT 386
Query 288 CTTCAAAGATTCCACCAACCTATACATACACTtatatatatatataAATCTATGCTACGT 347
||||||||||||||||||||||||||| | || | ||||||| ||||||||||||||
Sbjct 387 CTTCAAAGATTCCACCAACCTATACAT--A--TA-CT-TATATAT-AATCTATGCTACGT 439
Query 348 GTATATACTTCCGATATCCTTCACCCAACACTTTGAATCCGATTCCGATTTTGGATCTAT 407
||||||||||||||||||||||| ||||| ||||| | ||||||| |||||||||||
Sbjct 440 GTATATACTTCCGATATCCTTCAACCAACTCTTTG-A----ATTCCGACTTTGGATCTAT 494
Query 408 GAAACCGTTCTCAAAGAACGATCGGCGACGGTGGTCATTTGATTCAGTTTCCGCCGGAAA 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 495 GAAACCGTTCTCAAAGAACGATCGGCGACGGTGGTCATTTGATTCAGTTTCCGCCGGAAA 554
Query 468 AACCGCCGTCGGAAGTGCATCTACTTCACCGGGAACTGAATACTCCATTAACGGTGATCA 527
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 555 AACCGCCGTCGGAAGTGCATCAACTTCACCGGGAACTGAATACTCCATTAACGGTGATCA 614
Query 528 AGAGTTCGTTGAAGTCACAATCGATCTTCAAGACGATGACACAATCGTTCTTCGTAGCGT 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 615 AGAGTTCGTTGAAGTCACAATCGATCTTCAAGACGATGACACAATCGTTCTTCGTAGCGT 674
Query 588 CGAGCCAGCAA----C--TACCGCCATTGGAGATATCTCCGACGAC-ACAACCGGAATAA 640
||||||||||| | || | ||| |||||||||||||||||| || ||||||||||
Sbjct 675 CGAGCCAGCAACCGCCATTAATGTCATCGGAGATATCTCCGACGACAAC-ACCGGAATAA 733
Query 641 TGACTCCGGTTTCGATTTCTAGATCTCCGACGATGAAACGGACTTCATCGAATCGGTTCC 700
||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||
Sbjct 734 TGACTCCGGTTTCGATTTCGAGATCTCCGACGATGAAACGAACTTCATCTAATCGGTTCC 793
Query 701 GTCAATTCTCACAAGAGCTTAAGGCGGAAGCTGTGGCCAAGGCGAAACAGTTATCTCAGG 760
| |||||||||||||||||||| || ||||||||||| || |||||||||||||||||||
Sbjct 794 GACAATTCTCACAAGAGCTTAAAGCCGAAGCTGTGGCGAAAGCGAAACAGTTATCTCAGG 853
Query 761 AATTGAAACGATTCTCGTGGTCTCGTTCTTTTTCAGGCAATTTAACCACCACCAGTACCG 820
| |||||||||||||| |||||||||||||| ||||| || |||||||| || |||||||
Sbjct 854 AGTTGAAACGATTCTCATGGTCTCGTTCTTTCTCAGGTAACTTAACCACTACTAGTACCG 913
Query 821 CCGCTAATCAAAGCGGC-G-GC-GGTGGTGGTTTGGTAAACTCGGCTTTAGAAGCTCGAG 877
||||||||||||||||| | || |||||||||||||| ||||||||||||||||| ||||
Sbjct 914 CCGCTAATCAAAGCGGCGGTGCTGGTGGTGGTTTGGTGAACTCGGCTTTAGAAGCGCGAG 973
Query 878 CGTTGCGAAAACAACGAGCTCAGTTAGATCGGACTCGGTCTAGTGCTCAAAGAGCTCTTC 937
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 974 CGTTGCGAAAGCAACGTGCTCAGTTAGATCGGACTCGGTCTAGTGCTCAAAGAGCTCTTC 1033
Query 938 GTGGTTTGAGATTCATCAGCAACAAGCAAACGAACGTTGATGGTTGGAACGATGTTCAAT 997
|||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||
Sbjct 1034 GTGGTTTGAGATTCATTAGCAATAAGCAAAAGAACGTTGATGGTTGGAACGATGTTCAAT 1093
Query 998 CAAATTTCGAAAAATTCGaaaaaaaTGGTTACATCTATCGCTCCGATTTCGCTCAATGCA 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1094 CAAATTTCGAAAAATTCGAAAAAAATGGTTACATCTATCGCTCCGATTTCGCTCAATGCA 1153
Query 1058 TAGGAATGAAAGATTCTAAAGAATTTGCATTGGAACTGTTCGATGCATTGAGTAGAAGAA 1117
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1154 TAGGAATGAAAGATTCGAAAGAATTTGCATTGGAACTGTTCGATGCATTGAGTAGAAGAA 1213
Query 1118 GAAGATTAAAAGTTGAGAAAATCAATCACGATGAGCTTTATGAGTATTGGTCACAAATCA 1177
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1214 GAAGATTAAAAGTAGAGAAAATCAATCACGATGAGCTTTATGAGTATTGGTCACAAATCA 1273
Query 1178 ACGACGAAAGTTTTGATTCTCGTCTCCAGATCTTCTTCGACATAGTGGACAAGAATGAAG 1237
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1274 ACGACGAGAGTTTTGATTCTCGTCTCCAGATCTTCTTCGACATAGTGGACAAGAATGAAG 1333
Query 1238 ATGGGAGAATTACAGAAGAGGAAGTAAAGGAGATAATAATGTTGAGTGCATCTGCAAATA 1297
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1334 ATGGGAGAATTACAGAAGAGGAAGTAAAAGAGATAATAATGTTGAGTGCATCTGCAAATA 1393
Query 1298 AGCTATCAAGATTAAAGGAACAAGCAGAGGAATATGCAGCTTTGATTATGGAAGAGTTAG 1357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1394 AGCTATCAAGATTAAAGGAACAAGCAGAGGAATATGCAGCTTTGATTATGGAAGAGTTAG 1453
Query 1358 ATCCTGAAAGACTTGGCTACATAGAGCTATGGCAACTAGAGACTTTGCTTCTACAAAAAG 1417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1454 ATCCTGAAAGACTTGGCTACATAGAGCTATGGCAACTAGAGACTTTGCTTCTACAAAAAG 1513
Query 1418 ACACATACCTCAATTACAGTCAAGCATTGAGCTATACAAGCCAAGCATTGAGCCAAAACC 1477
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1514 ACACATACCTCAATTACAGTCAAGCATTGAGCTATACGAGCCAAGCATTGAGCCAAAACC 1573
Query 1478 TTCAAGGGTTACGAAAAAAGAGTCGAATACATCGAATGAGTTCGAATTTCGTCTAC-TTC 1536
||||||||||| | |||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct 1574 TTCAAGGGTTAAGGGGAAAGAGTCGAATACATAGAATGAGTTCGGATTTCGTCTACATT- 1632
Query 1537 ATGCAAGAGAATTGGAAAAGGATATGGGTTTTATCCTTATGGATCATGATCATGATCGGA 1596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1633 ATGCAAGAGAATTGGAAAAGGATATGGGTTTTATCCTTATGGATCATGATCATGATCGGA 1692
Query 1597 TTATTCTTATGGAAATTCTTCCAATACAAGCAAAAAGATGCATTTCATGTGATGGGTTAT 1656
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1693 TTATTCTTGTGGAAATTCTTCCAATACAAGCAAAAAGATGCATTTCATGTGATGGGATAT 1752
Query 1657 TGTTTACTCACAGCAAAAGGAGCAGCTGAAACACTTAAATTCAACATGGCTCTAATACTT 1716
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1753 TGTTTACTCACAGCCAAAGGAGCAGCTGAAACACTTAAATTCAACATGGCTCTAATACTT 1812
Query 1717 TTCCCGGTTTGCAGAAACACCATTACCTGGCTTAGATCCACAAGACTCTCTTACTTCGTT 1776
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1813 TTCCCAGTTTGCAGAAACACCATTACTTGGCTTAGATCCACAAGACTCTCTTACTTCGTT 1872
Query 1777 CCTTTTGATGATAATATCAACTTCCACAAGACAATTGCCGGAGCCATTGTAGTAGCTGTG 1836
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1873 CCTTTTGATGATAATATCAACTTCCACAAGACAATTGCTGGAGCCATTGTAGTAGCTGTG 1932
Query 1837 ATCCTTCATATTGGAGACCATATTGCTTGTGATTTCCCTAGAATTGTTAGAGCCACTGAA 1896
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct 1933 ATCCTTCATATTGGAGACCATCTTGCTTGTGATTTCCCTAGAATTGTTAGAGCCACCGAA 1992
Query 1897 TACGATTACAATCGGTATCTGTTTCATTACTTTCAAACAAAACAGCCAACATACTTCGAC 1956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1993 TACGATTACAATCGGTATCTGTTTCATTACTTTCAAACAAAACAGCCAACATACTTCGAC 2052
Query 1957 CTCGTTAAGGGACCTGAAGGAATCACAGGGATTTTAATGGTCATTTTGATGATTATTTCA 2016
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2053 CTCGTTAAGGGACCTGAAGGAATCACTGGGATTTTAATGGTCATTTTGATGATTATTTCA 2112
Query 2017 TTCACATTAGCAACAAGATGGTTTAGGCGTAACCTCGTCAAGCTTCCTAAGCCATTTGAT 2076
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2113 TTCACATTAGCAACAAGATGGTTTAGGCGTAACCTAGTCAAGCTTCCTAAGCCATTTGAT 2172
Query 2077 CGACTTACCGGTTTTAACGCCTTTTGGTATTCGCATCATTTGTTCGTCATTGTTTATATC 2136
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2173 CGACTAACCGGTTTTAACGCCTTTTGGTATTCGCATCATTTGTTCGTCATTGTTTATATC 2232
Query 2137 TTGCTTATCCTTCACGGTACCTTCCTCTATTTCGCCAAGCCTTGGTATGTTCGCACGACA 2196
|||||||| ||||| |||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct 2233 TTGCTTATTCTTCATGGTATCTTCCTCTATTTCGCCAAGCCTTGGTATGTTCGTACGACA 2292
Query 2197 TGGATGTATCTTGCGGTACCAATTTTACTCTATGGGGGAGAGAGAACACTTAGGTATTTC 2256
|||||||||||||| |||||| ||||||||||||| ||||| |||||||||||||| |||
Sbjct 2293 TGGATGTATCTTGCAGTACCAGTTTTACTCTATGGTGGAGAAAGAACACTTAGGTACTTC 2352
Query 2257 CGTTCTGGTTCTTATTCGGTTCGACTGCTTAAGGTTGCTATATATCCTGGTAACGTTCTG 2316
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2353 CGTTCTGGTTCTTATTCGGTTCGACTGCTTAAGGTTGCTATATATCCTGGTAATGTTCTA 2412
Query 2317 ACGCTGCAAATGTCGAAACCAACTCAATTTCGTTACAAAAGCGGACAATACATGTTCGTC 2376
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2413 ACGCTACAAATGTCGAAACCAACTCAATTTCGTTACAAAAGCGGACAATACATGTTTGTC 2472
Query 2377 CAATGCCCTGCAGTTTCGCCATTCGAATGGCATCCATTCTCAATTACTTCAGCACCTGAA 2436
||||| ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 2473 CAATGTCCTGCGGTTTCGCCATTCGAGTGGCATCCATTCTCAATTACTTCCGCACCTGAA 2532
Query 2437 GATGATTATGTCAGCATTCACATTAGACAACTCGGAGATTGGACTCAAGAACTCAAAAGA 2496
||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 2533 GATGATTATATCAGCATTCACATTAGACAACTTGGTGATTGGACTCAAGAACTCAAAAGA 2592
Query 2497 GTATTCTCTGAAGTTTGTGAGCCACCAGTTGCCGGTAAAAGCGGACTTCTCAGAGCCGAT 2556
|||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct 2593 GTATTCTCTGAAGTTTGTGAGCCACCGGTTGGCGGTAAAAGCGGACTTCTCAGAGCCGAC 2652
Query 2557 GAAACAACAAAGAAAAGTTTGCCAAAGCTATTGATAGATGGACCATACGGTGCACCAGCA 2616
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2653 GAAACAACAAAGAAAAGTTTGCCAAAGCTATTGATAGATGGACCGTACGGTGCACCAGCA 2712
Query 2617 CAAGACTATAGGAAATATGATGTTCTCTTGTTAGTTGGTCTTGGCATTGGTGCAACTCCA 2676
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2713 CAAGATTATAGGAAATATGATGTTCTCTTATTAGTTGGTCTTGGCATTGGTGCAACTCCA 2772
Query 2677 TTTATCAGTATCTTGAAAGATTTGCTTAACAACATTGTTAAAATGGAAGAGCATGCGGAT 2736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2773 TTTATCAGTATCTTGAAAGATTTGCTTAACAACATTGTTAAAATGGAAGAGCATGCGGAT 2832
Query 2737 TCGATCTCGGATTTCAGTAGATCATCAGAACACAGCACAGGAAGCAACGGTGACCCGCCA 2796
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 2833 TCGATCTCGGATTTCAGTAGATCATCAGAATACAGCACAGGAAGCAACGGTGACACGCCA 2892
Query 2797 AGACGAAAAAGAATACTAAAAACCACAAATGCTTACTTCTACTGGGTCACAAGAGAACAA 2856
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2893 AGACGAAAGAGAATACTAAAAACCACAAATGCTTATTTCTACTGGGTCACAAGAGAACAA 2952
Query 2857 GGCTCTTTTGATTGGTTCAAAGGTGTCATGAATGAAGTTGCAGAACTTGACCAACGGGGT 2916
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2953 GGCTCTTTTGATTGGTTCAAAGGTGTCATGAACGAAGTTGCAGAACTTGACCAACGGGGT 3012
Query 2917 GTGATAGAGATGCATAACTATTTAACAAGTGTGTATGAAGAAGGTGATGCTCGTTCTGCT 2976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3013 GTGATAGAGATGCATAACTATTTAACAAGTGTGTATGAAGAAGGTGATGCTCGTTCTGCT 3072
Query 2977 CTCATTACAATGGTTCAAGCTCTAAACCATGCCAAAAATGGTGTCGACATTGTCTCTGGC 3036
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 3073 CTCATTACAATGGTTCAAGCTCTTAATCATGCCAAAAATGGTGTCGACATTGTCTCTGGC 3132
Query 3037 ACTAGGGTCAGAACACACTTTGCAAGACCTAATTGGAAGAAGGTTCTCACTAAGCTAAGT 3096
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 3133 ACTAGGGTCAGAACACACTTTGCAAGACCTAATTGGAAGAAGGTTCTCACAAAGCTAAGT 3192
Query 3097 TCCAAGCATTGCAATGCAAGGATAGGAGTGTTTTATTGCGGAGTACCGGTTTTAGGCAAA 3156
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 3193 TCCAAGCATTGCAATGCAAGAATAGGAGTGTTTTATTGCGGAGTACCGGTTTTAGGGAAG 3252
Query 3157 GAGCTTAGCAAACTCTGCAACACATTCAATCAAAAAGGTTCAACCAAGTTTGAATTTCAC 3216
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3253 GAGCTTAGCAAACTATGCAACACATTCAATCAAAAAGGTTCAACCAAGTTTGAATTTCAC 3312
Query 3217 AAGGAGCACTTCTAAAAGACAAGATGGAAGAAGCCTAAAGCCCTCTAGATTCTTTAATAT 3276
|||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct 3313 AAGGAGCATTTCTAAAAGACAAGAAGGAAGAAGCCAAAAGCCCTCTAGATTCTTTAATAT 3372
Query 3277 CTCACATTTAGCCACTTATAGTATAAAAGCAATCTCTTCACTATTTAATTCAAAGTGATT 3336
|||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3373 CTCAAATTTAGCCACTTATAGTATAAAGGCAATCTCTTCACTATTTAATTCAAAGTGATT 3432
Query 3337 AAACGTTAACACACTGTCAAAAGTGAGTGTGTTAACGCTTAATTTCAACACGTTCTAGGT 3396
||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||||
Sbjct 3433 AAACGTTAACACACTGTCAAAAGTGAGTGTGTTAACGTTTAGCTCCA-CACGTTCTAGGT 3491
Query 3397 CTATATACACCGAGGCATACGTGTAAATATACGAGATAGAAGAATTTTACGGGGGAAGTT 3456
||||||||||||||||||||||||||||||||||| ||||||| || | ||||| ||
Sbjct 3492 TTATATACACCGAGGCATACGTGTAAATATACGAGACAGAAGAAATTCAAGGGGG---TT 3548
Query 3457 TGATAGAAGCATATAGTAAA-TTTTAAAAATTTCTTGTATAGTAAGCAAACGAGGTGGAG 3515
|||||||||||||||||||| |||||||| |||||||||||||||||||| ||| |||||
Sbjct 3549 TGATAGAAGCATATAGTAAAATTTTAAAA-TTTCTTGTATAGTAAGCAAATGAGATGGAG 3607
Query 3516 ATTCTAGAAGAGAGGTGAGGTTTGGTGAGGGATAAAGACTGTAATACGACGTCGTTTTCG 3575
| |||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||
Sbjct 3608 ACTCTAGAAGAGAGGTGAGGTTTGGTGAGGGATAGCGACAGTAATACGACGTCGTATTCG 3667
Query 3576 ATTGAAGAGGAAGTGCAATACAGCTGCAGGGAAGATAAATGATGGAAGCAAATAATGCGT 3635
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3668 ATTGTAGAGGAAGTGCAATACAGCTGCAGGGAAGATAAATGATGGAAGCAAATAATGCGT 3727
Query 3636 TGATAAGGTCCATGTGATTAGGAAGATGACAtt-tttttgggggat-tttttttgctcat 3693
||||||||||||||||||||||||||||||| | |||||||||||| ||||||| || ||
Sbjct 3728 TGATAAGGTCCATGTGATTAGGAAGATGACACTCTTTTTGGGGGATATTTTTTT-CT-AT 3785
Query 3694 tttaaatttttAGTGGAGTCAGTGAAAGAGAGACTAGAGTTTCTAGAATCTTGTGAGGAT 3753
||| |||||||||||||| ||||||||||||||||||||| |||||| ||| || ||
Sbjct 3786 TTTTTTTTTTTAGTGGAGTCGGTGAAAGAGAGACTAGAGTTTTTAGAATATTG-GAAGA- 3843
Query 3754 ATTTGGGATTGGGAAATAAAGGAGTTATAATATCTTT--ATCATTATATTATA-A-CTAA 3809
|| | ||||||| ||| ||||||||||||| ||| |||||| ||||||| | ||||
Sbjct 3844 ATAT----TTGGGAA-TAAGGGAGTTATAATATTTTTGTATCATTGTATTATATAACTAA 3898
Query 3810 TGTAAGGTGTACAAAGCATAAAATTTGATAGTT 3842
|||||||||||||||||||||||||||||||||
Sbjct 3899 TGTAAGGTGTACAAAGCATAAAATTTGATAGTT 3931
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 191537388374
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5