BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg474984 Length=2459 Score E Sequences producing significant alignments: (Bits) Value AT1G63670.1 | Symbols: | Protein of unknown function (DUF3741)... 3459 0.0 > AT1G63670.1 | Symbols: | Protein of unknown function (DUF3741) | chr1:23607422-23610244 REVERSE LENGTH=2270 Length=2270 Score = 3459 bits (1873), Expect = 0.0 Identities = 2138/2264 (94%), Gaps = 26/2264 (1%) Strand=Plus/Plus Query 204 GGTCTTTGAGAAACGATTTTACTAAATTGGAGACGAGAGTTTTGAATGATTGGTGAATTT 263 |||||||||||| || |||||||| |||| ||||||||||||||||||||||||||| | Sbjct 25 GGTCTTTGAGAATCGGTTTTACTAGATTGAAGACGAGAGTTTTGAATGATTGGTGAA--T 82 Query 264 GTTGTTGATCATCAATGGAGAAGAAGCGATCACCGAGAAGTAGCAAGAGTCCTGGACCTG 323 ||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||| Sbjct 83 -TTGTTGATCATCAATGGAGAAGAAGAGATCACCAAGAAGTAGTAAGAGTCCTGGACCTG 141 Query 324 CAATTTTCCCTAAAAGCCCTCTTGTCTACGAGAATTATAAGTCTGGTTGTGGTTGGAAAC 383 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 142 CAATTTTCCCTAAAAGCCCTCTTGTCTACGAGAGTTATAAGTCTGGTTGTGGTTGGAAAT 201 Query 384 TGATAAAGTTCTTCGATTTCGGTCATGTCAAATCTGGTAATAAGAGACTTGGTTCAGAGA 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 202 TGATAAAGTTCTTCGATTTCGGTCATGTCAAATCTGGTAATAAGAGACTTGGTTCAGAGA 261 Query 444 AGAAGAAATTCATCAGAGATTCTGCTGGTAATGTTTATACTAAAAGCCAGCTTGATTTGC 503 ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 262 AGAAGAAATTCGTCAGAGATTCTGCTGGTAATGTTTATACTAAAAGTCAGCTTGATTTGC 321 Query 504 TTAAGAAGCTTCATGAGAAGTGTCAGTGTAATGATCGGATTGTGGAAGAAGAGAGTTCAT 563 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 322 TTAAGAAGCTTCATGAGAAGTGTCAGTGTAATGATCGGATTGTGGAAGAAGAGAGATCAT 381 Query 564 GTAAACCTAAAACAAGGAGAAGATCTTTGAGTTCTGAAAGAGAACTTGAGAAGTATGAAT 623 |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 382 GTAAGCCTAAAACAAGGAGAAGATCTTTGAGTTCTGATAGAGAACTTGAGAAGTATGAAT 441 Query 624 CTAAACCTGTTCAGGGATTGCTAGAGAGAGAGATAAGAAGGATCAAGAATCTAAAGGAGG 683 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 442 CTAAACCTGTTCAGGGATTGCTAGAGAGAGAGATAAGAAGGATCAAGAATCTAAAGGATG 501 Query 684 AAACTTGCGATGACCCTGATAAGCAAAAGCAATCTTCTTTGAGTGAAATTGAGAAGACAA 743 ||||||| |||| ||| ||||| |||||||||||||| |||||||||||| | || | Sbjct 502 AAACTTGTGATGTCCCGGATAAACAAAAGCAATCTTCGTTGAGTGAAATT--G-AG---A 555 Query 744 ATGATAAGT-ATAATCAAATAGATCTGAAGAGTGGGAGAGATTGTAAGAAGAGTGCAGAG 802 ||||| ||| |||| || || ||| |||||| |||||||||||||||||||||| ||||| Sbjct 556 ATGAT-AGTGATAAGCAGATGGATATGAAGAATGGGAGAGATTGTAAGAAGAGTTCAGAG 614 Query 803 ATTAACCTTCAAGCTTGTGTGAATGAAGCTGCTGAAACATTTATTTGTTCCAAGGCGGAG 862 |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||| || Sbjct 615 ATTAACCTTCAAGCTTGTGTGAATGAAGCTGCTGAAACCTTTATCTGTTCAAAGGCAGAA 674 Query 863 GAGAAGGGGAAAGATCGGTCTAAGCAGTTCATGGAGGCGTTAGATATTCTAAGTTCGAAC 922 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 675 GAGAAGGGGAAAGATCGGTCTAAGCAGTTCATGGAGGCGTTAGATATTCTAAGTTCGAAC 734 Query 923 AAAGAATTGTTCATTACACTCTTACAAGATCCTAATTCA--TTC-TCG-AAAAAAGGTCA 978 ||||||||||||||||||||||||||||||||| ||||| ||| || ||||||| | Sbjct 735 AAAGAATTGTTCATTACACTCTTACAAGATCCTCATTCATTTTCGGCGAAAAAAAGCT-T 793 Query 979 AGACTTGGAAGGATGTAAGGTAAAGGAACCGCGGGATAACTCTCCATCAAGGGCTGATGA 1038 ||||||||| |||| ||||||||| |||||||| ||||| |||||||||| ||||||||| Sbjct 794 AGACTTGGAGGGATCTAAGGTAAAAGAACCGCGTGATAAATCTCCATCAATGGCTGATGA 853 Query 1039 TTTGGATAACATTGTTCTCTTGAAGCCTAGATTATCAAGTTCGGTTGATGATAAAGTGTA 1098 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 854 TTTGGATAGCATTGTTCTCTTGAAGCCTAGATTATCAAGCTCGGTTGATGATAAAGTGTA 913 Query 1099 CTTGAGATTCAAACATCTGGCCAAGAAGTTGAAGCTCGTTGTTGGATCTAACAAAGATAG 1158 |||||||||||||||||| |||||||||||||| || |||||||||||||||||||| || Sbjct 914 CTTGAGATTCAAACATCTAGCCAAGAAGTTGAAACTTGTTGTTGGATCTAACAAAGACAG 973 Query 1159 CAATCACGCAGAAAACAAACCTGAAGGTAGCGGTAAAGGTAGAGAAACCGAGGCTGCTGC 1218 ||||||||||||||||||||| ||||||||| ||| ||||||||||| |||||||||||| Sbjct 974 CAATCACGCAGAAAACAAACCCGAAGGTAGCAGTAGAGGTAGAGAAATCGAGGCTGCTGC 1033 Query 1219 TTTTAGAACAAGTGATGTTTCTACAAGTACATTTGGACATAGAAGCCCGGAGTCACCAGT 1278 |||||||||||||||||||||||| |||||| |||| |||||||||||||||||||| || Sbjct 1034 TTTTAGAACAAGTGATGTTTCTACCAGTACAGTTGGTCATAGAAGCCCGGAGTCACCGGT 1093 Query 1279 GTTTAGGCGCAAAAAACGGGTTGAATCCGATGTTTTCAAGCTAAGTATCGAGAACGATGT 1338 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1094 GTTTAGGCGCAAGAAACGGGTTGAATCCGATGTTTTCAAGCTAAGTATCGAGAACGATGT 1153 Query 1339 TTTGCCAAGGAGACTCATGGTAGAAAGGCAACATGAGAGATTAAATTCTTCACCGGTTTA 1398 ||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct 1154 TTTGCCAAGGAGATTCATGGTGGAAAGGCAACAGGAGAGATTAAATTCTTCACCGGTTTA 1213 Query 1399 TGAAGTTCCTTAT-CAATTGAGTAGCTTGCagacaaagctcaaagaaagaagacagaagc 1457 ||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1214 TGAAGTTCCTTATGC-ATTGAGTAGTTTGCAGACAAAGCTCAAAGAAAGAAGACAGAAGC 1272 Query 1458 tagagaagaaaagagagagCTTCAAGTTGTGGTCTTTGGACAAAAACTGCGAGGTTTTTG 1517 |||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct 1273 TAGAGAAGAAGAGAGAGAGCTTCAAGTTGTGGTCTTTGGACAAGAACTTCGAGGTTTTTG 1332 Query 1518 ATCCGAATCCATACAATTCTAATCTAAGGTCTCTCGACGGCAATTGTACAGGTTCTGCTG 1577 | |||||||||||||||||||||||||||| |||||| |||||||||||||||| ||| Sbjct 1333 ACCCGAATCCATACAATTCTAATCTAAGGTTTCTCGAAAACAATTGTACAGGTTCTTCTG 1392 Query 1578 AGTACAAAAGTCTGAGAACTCATGTAGAAGACGGATTCGTGGAAGATAGATGTCTTGAGA 1637 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1393 AGTACAAAAGTCTGAGAACTCATGTAGAAGACGGATTCGTGGAAGATAGATATCTTGAGA 1452 Query 1638 GCTCATTAGCAGAGTCGAATTCGAGCCTAGAAAGACAAGACTGCAACATTCATGACCCGA 1697 |||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1453 GCTCATTAGCGGAGACGAATTTGAGCCTAGAAAGACAAGACTGCAACATTCATGACCCGA 1512 Query 1698 AACAGGAGCAGGAACAACCGAGTCCTGTCTCTGTTCTTGAGAGGATTCATTTGGAAGATG 1757 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct 1513 AACAGGAGCAGGAACAACCGAGTCCTGTCTCTGTTCTTGAAAGGATTCATTTGGAAGACG 1572 Query 1758 AAACAGTTATCCCCGGAAATGTGAAAATTTCTAACCTTGAAGAGAAGATTGGAGTATCTT 1817 |||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||| | Sbjct 1573 AAACAGTTATCCCCGGAAATGTTAAAATATCTAACCTTGAAGAGAAGATTGGATTATCAT 1632 Query 1818 TTGATGATTCC-AACATTGAACTTGTCGAAAAAGAATCCGTTCATGAGTTTGTGAAAAAA 1876 ||||||| ||| |||||||| ||| | ||||||||||| ||||||||||||||||| ||| Sbjct 1633 TTGATGA-TCCTAACATTGATCTTATAGAAAAAGAATCTGTTCATGAGTTTGTGAAGAAA 1691 Query 1877 GTTCTTGAAGCTTCAAGATTGAATTGGACTAATCTTATGGCAAGGTGCAACGAAGAAACA 1936 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1692 GTTCTTGAAGCTTCAAGATTGAATTGGACTAATCTTATGGCAAGGTGCAACGAAGACACA 1751 Query 1937 TCGCTACTCGATGAATTCTCACACGGTAATCACAACGACCAGCTTCTTCTTGTTCTTGAT 1996 || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1752 TCACTACTCGATGAATTCTCACACGGTAGTCACAACGACCAGCTTCTTCTTGTTCTTGAT 1811 Query 1997 TACACCGACGAGATTCTCCGCGAGATTTACCGTCAAGACATCAAGTTTTGGCCTTTCTCG 2056 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1812 TACACCGACGAGATTCTCCGCGAGATTTACCGTCAAGACATCAAGTTTTGGCCTTTCTCG 1871 Query 2057 CCATCGAAGAGCTCTAGAGTCGTCAATCTACAATCATCCCTTAGAGAAGAAGATCTGATT 2116 |||||||||||||| |||||| |||||||| ||||||||||||||||||| ||||||||| Sbjct 1872 CCATCGAAGAGCTCGAGAGTCCTCAATCTAGAATCATCCCTTAGAGAAGATGATCTGATT 1931 Query 2117 CACGAGACGATGAGACATTTTGACTGGAGTTTACTCTGCTCCGACTCTCCTACAAGATCA 2176 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1932 CACGAGACGATGAGACATTTTGACTGGAGTTTACTCTGCTCTGACTCTCCTACAAGATCA 1991 Query 2177 TTGGATCAGATCATTGAAACTGATATAATAAAGCCATGTCTTTGGTTGGATTTTGGTGGT 2236 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1992 TTGGATCAGATCATTGAAACTGATCTAATAAAGCCATGTCTTTGGTTGGATTTTGGTGGT 2051 Query 2237 GAATCTGAAGGTGTTGTGTCTGATATTGTGGAAAAGATTCAGCAACAATTGGTGCTTGAG 2296 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2052 GAATCTGAAGGTGTTGTGTCTGATATTGTGGAAAAGATTCAGCAACAATTGGTGCTTGAG 2111 Query 2297 ATCTCTCATGAGCTAAGAACAATGCAGAGGAGCATATTATGTCGATTAATCTGAATTTCT 2356 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct 2112 ATCTCTCATGAGCTAAGAACAATGCAGAGAAGCATATTATGTCGATTAATCTGAATCTCT 2171 Query 2357 TCGGATATATTCCAACAttttttttGTCTGTATAAAAATGTTTAAAATTTGAGAATCTTC 2416 ||||| |||||| ||| ||||||||||||||||||||| ||||| ||||||||||||| | Sbjct 2172 TCGGAGATATTC-AACTTTTTTTTTGTCTGTATAAAAAAGTTTATAATTTGAGAATCTAC 2230 Query 2417 TCTTCATTATTATTAGTTATCTAAATTTAA-AAAGATTCGATCT 2459 |||||||| || | ||||||||||||| || ||||||||||||| Sbjct 2231 TCTTCATT-TT-T-AGTTATCTAAATT-AAGAAAGATTCGATCT 2270 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 122006005376 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5