BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474991
Length=3749
Score E
Sequences producing significant alignments: (Bits) Value
AT1G63640.1 | Symbols: | P-loop nucleoside triphosphate hydrol... 5417 0.0
AT2G11280.1 | Symbols: | pseudogene, hypothetical protein | ch... 750 0.0
AT5G41310.1 | Symbols: | P-loop nucleoside triphosphate hydrol... 568 2e-160
> AT1G63640.1 | Symbols: | P-loop nucleoside triphosphate hydrolases
superfamily protein with CH (Calponin Homology) domain
| chr1:23589043-23595821 REVERSE LENGTH=3673
Length=3673
Score = 5417 bits (2933), Expect = 0.0
Identities = 3240/3386 (96%), Gaps = 29/3386 (1%)
Strand=Plus/Plus
Query 387 AAATGAGCAGTCATCTGGGACAGGACGCCAATATGAATGGGGTCTATGTTCGATCAGATG 446
||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct 265 AAATGAGCAGTCATCTGTCACAGGACGCCAATATGAATGGTGTCTATGTTCGATCAGATG 324
Query 447 TGTCTAGCATGCTGAGTTTTGACGGATCAGATAGTCGTGAAAG---CGATGATAGTAAGA 503
||||||||||||||||||||||||||||||| ||||| ||||| ||||| |||||||
Sbjct 325 TGTCTAGCATGCTGAGTTTTGACGGATCAGAAAGTCGCGAAAGTATGGATGACAGTAAGA 384
Query 504 AAGGTCATCAGAGTTTGGTGGAGTGGTTAAATGAGACACTTCCTTATCTGAAGTTACCAT 563
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 385 AAGGTCATCAGAGTTTGGTTGAGTGGTTAAATGAGACACTTCCTTATCTGAAGTTACCAT 444
Query 564 GGGAAGCTTCAGAGGACGAACTGAGAGCATGCTTGAGGGATGGAACGGTCTTGTGTAGCC 623
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 445 GGGAAGCTTCAGAGGACGAACTGAGAGCATGCTTGAGGGATGGAACTGTCTTGTGTAGCC 504
Query 624 TTTTAAATCAGCTTAGTCCTGGGTCAATGAGAATGGGAGGCAGCTTTGAGCCTGCTAGTG 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 505 TTTTAAATCAGCTTAGTCCTGGGTCAATGAGAATGGGAGGCAGCTTTGAGCCTGCCAGTG 564
Query 684 TAAAAATTGAGCGGTTTCTGACTGCTATGGATGAAATGGCCCTGCCTAGGTTCGAAGTTT 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 565 TAAAAATTGAGCGGTTTCTGACTGCTATGGATGAAATGGCCCTGCCTAGGTTCGAAGTTT 624
Query 744 CAGACATAGAACAGGGGGATATGGTGCCAGTTTTACAGTCCCTTAAGGCGCTTAAAGCAA 803
|||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 625 CAGATATAGAACAGGGGGATATGGTGCCAGTTTTACAGTCCCTGAAGGCGCTTAAAGCCA 684
Query 804 GTTTTTCCGATGGTAGTTATGATAAGAACTCACTAGCTGCGAGGAGGAGATGGAGTTTAC 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 685 GTTTTTCCGATGGTAGTTATGATAAGAACTCACTAGCTGCGAGGAGGAGATGGAGCTTGC 744
Query 864 CAGAGGACCACTCAGATTCAAGAGGAGATGACCGCAACTTTACGGATGGATTCCAGTCGA 923
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 745 CAGAGGACCACTCAGATTCAAGAGGAGATGACCGCAACTTTACTGATGGATTCCAGTCGA 804
Query 924 AGGAAGGATCTGAGATTGATATATCTGATGCTAAAATTTCGGATTTACTTAAATCAAACA 983
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 805 AGGAAGGATCTGAGATTGATATGTCTGATGCTAAAATTTCGGATTTACTTAAATCCAACA 864
Query 984 GTTTACGAAATGCTCCTACTAGGTCACTGTTTGACATGCTGGATAAACTTCTAGATGAGA 1043
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 865 GTTTACGAAATGCTCCTACTAGGTCACTGTTTGACATGCTGGATAAGCTTCTAGATGAGA 924
Query 1044 GTATGACGAAGATGAATGGACATGTGTCTCATGCTATGGCATCTCTCTTTAGCGCACTTG 1103
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 925 GCATGACGAAGATGAATGGACATGTGTCTCATGCTATGGCATCTCTCTTGAGCGCACTTG 984
Query 1104 TGCAAGTGATTGAACAGAGAATCTCAAATCAAGCTGATAACCTAAAGAATCAAAATATAC 1163
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 985 TGCAAGTGATTGAACAAAGAATCTCAAATCAAGCTGATAACCTAAAGAATCAAAATATAC 1044
Query 1164 TCTTTCGGGTACGTGAAGAAAAATACAGGTCAAGAATAAAGGTCTTAGAAACCTTGGCAG 1223
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1045 TCTTTAGGGTACGTGAAGAAAAATACAGGTCAAGAATAAAGGTCTTAGAATCCTTGGCAG 1104
Query 1224 CTGGGACAACACAGGAAAACGAGATTGTTACGAACTGTATGGAGCATATAAAGCTTgaga 1283
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1105 CTGGGACAACAAAGGAAAACGAGATCGTTACGAACTGTATGGAGCATATAAAGCTTGAGA 1164
Query 1284 aaaacagaatagaagagagagaaagatcagaagaaaaagatgtggtgagactgagaaagg 1343
||| |||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||
Sbjct 1165 AAACCAGAATAGAAGAGAAAGAACGATCAGAAGAAAAAGATGTTGTGAGACTGAGAAAGG 1224
Query 1344 aaaaagagCGCAGCGATGCTGAGATTCGCAAGCTGAAGCAGGAACTCAAAGTGGTGAAAG 1403
||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 1225 AAAAAGAGCGCAGTGATGCTGAGATTCGCCAGCTGAAGCAGGAACTCAAATTGGTGAAAG 1284
Query 1404 AAACACATGAAAACCAATGCTTGGATTTAGAAGCAAAAGCACAAAAAACTAGAGACGAGT 1463
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 1285 AGACACATGAAAACCAATGCTTGGAATTAGAAGCAAAAGCACAAAAAACTAGAGATGAGT 1344
Query 1464 TGGAGAAGAAGTTAAAAGATGCAGAGTTACATGTTGTAGATTCAAGTAGGAAGGTGAAAG 1523
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1345 TGGAGAAGAAGTTAAAAGATGCGGAGTTACATGTTGTAGATTCAAGTAGGAAGGTGAAAG 1404
Query 1524 AGCTTGAGAAGTTGTGCCAATCTAAATCTCAAAGATGGGAGAAAAAAGAGTGCATCTACC 1583
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1405 AACTTGAGAAGTTGTGCCAATCTAAATCTCAAAGATGGGAGAAAAAAGAGTGCATCTACC 1464
Query 1584 AGAACTTCATAGACAACCATTCTGGAGCCTTGCAGGAGTTGAATGCTACTTCGTTGTCTA 1643
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1465 AGAACTTCATAGACAACCATTCTGGAGCCTTGCAGGAGTTGAGTGCTACTTCGTTGTCTA 1524
Query 1644 TAAAACATGAAGTCTTAAGGACACAGAGGAAATACTTTGAGGATCTAAATTACTACGGTT 1703
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1525 TAAAACATGAAGTCGTAAGGACACAGAGGAAATACTTTGAGGATTTAAATTACTACGGTT 1584
Query 1704 TGAAGCTCAAAGGAGTGGCTGATGCAGCGAAAAATTACCATGTGGTCCTTGAGGAAAATC 1763
|||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||
Sbjct 1585 TGAAGCTCAAAGGAGTGGCTGATGCAGCAAAAAATTACCATGTTGTCCTTGAAGAAAATC 1644
Query 1764 GAAGACTGTACAATGAAGTGCAAGAATTGAAAGGAAATATCAGAGTATATTGCCGGATTA 1823
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1645 GAAGACTGTACAATGAAGTGCAAGAATTGAAAGGAAATATCAGAGTCTATTGCCGGATTA 1704
Query 1824 GACCATTCCTTCCAGGGCAAAACAGTAGACAAACAACTATAGAATACATTGGTGAGAAC- 1882
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1705 GACCATTTCTTCCAGGGCAAAACAGTAGACAAACAACTATAGAATACATTGGTGAGA-CT 1763
Query 1883 GGTGAATTGGTGGTTGCGAATCCCTTTAAGCAAGGGAAAGATACGCATCGGTTATTTAAA 1942
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1764 GGTGAATTGGTGGTTGCGAATCCCTTTAAGCAAGGGAAAGATACGCATCGGTTATTTAAG 1823
Query 1943 TTCAACAAAGTTTTCGATCAAGCAGCAACGCAAGAGGAGGTTTTCCTAGATACTCGACCG 2002
||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct 1824 TTCAACAAAGTTTTCGATCAAGCAGCAACACAAGAGGAGGTTTTCTTAGATACTCGACCA 1883
Query 2003 TTAATTCGATCCATTCTTGATGGCTATAATGTTTGTATATTTGCCTATGGTCAGACTGGT 2062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1884 TTAATTCGATCCATTCTTGATGGCTATAATGTTTGTATATTTGCCTATGGTCAGACTGGT 1943
Query 2063 TCTGGAAAAACTTATACAATGAGTGGGCCAAGCATTACTTCAAAAGAAGACTGGGGTGTC 2122
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1944 TCTGGAAAAACTTATACAATGAGTGGGCCAAGCATCACTTCAAAAGAAGACTGGGGTGTC 2003
Query 2123 AATTATAGAGCTTTGAATGACTTGTTTCTCTTAACTCAGAGTAGACAAAACTCTGTCATG 2182
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2004 AATTATAGAGCTTTGAATGACTTGTTTCTCTTAACTCAGAGTAGACAAAACACTGTCATG 2063
Query 2183 TATGAAGTTGGTGTTCAAATGGTGGAGATATATAATGAGCAAGTTCGTGATATACTTTCT 2242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2064 TATGAAGTTGGTGTTCAAATGGTGGAGATATATAATGAGCAAGTTCGTGATATACTTTCT 2123
Query 2243 GATGGTGG-----G---A---TT-----T--GGAACACCGCCTTGCCAAATGGGCTAGCA 2284
|||||||| | | || | ||||||||||||| |||||||||||||||
Sbjct 2124 GATGGTGGTTCCAGTCGAAGATTAGGGATTTGGAACACCGCCTTACCAAATGGGCTAGCA 2183
Query 2285 GTCCCTGATGCAAGCATGCATTGTGTGAGATCAACAGAAGATGTTCTTGAACTGATGAAT 2344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2184 GTCCCTGATGCAAGCATGCATTGTGTGAGATCAACAGAAGATGTTCTTGAACTGATGAAT 2243
Query 2345 ATTGGACTAATGAACAGAACCGTGGGTGCTACAGCTCTCAATGAAAGGAGCAGTAGATCA 2404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2244 ATTGGACTAATGAACAGAACCGTGGGTGCTACAGCTCTCAATGAAAGGAGCAGTAGATCA 2303
Query 2405 CACTGTGTTCTTTCTGTCCATGTACGTGGTGTTGACGTGGAAACCGATTCAATTTTGCGG 2464
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 2304 CACTGTGTTCTTTCTGTCCATGTACGAGGTGTCGACGTGGAAACCGATTCAATTTTGCGG 2363
Query 2465 GGCAGTTTGCATTTAGTTGACCTTGCAGGAAGTGAGAGGGTTGATCGCTCTGAGGCAACC 2524
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2364 GGCAGTTTGCATTTAGTTGACCTTGCTGGAAGTGAGAGGGTTGATCGCTCTGAGGCAACC 2423
Query 2525 GGAGAGAGACTTAAGGAAGCTCAACATATAAACAAATCATTATCAGCCCTTGGCGACGTC 2584
|||||||| || ||||||||||| ||||| ||||||||||| ||||| ||||| || |||
Sbjct 2424 GGAGAGAGGCTCAAGGAAGCTCAGCATATCAACAAATCATTGTCAGCACTTGGGGATGTC 2483
Query 2585 ATCTTTGCTTTAGCGCACAAGAACCCTCATGTTCCGTACAGGAACAGCAAATTGACTCAA 2644
|| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 2484 ATATTTGCTTTAGCGCACAAGAACCCTCATGTTCCTTACAGAAACAGCAAATTGACTCAA 2543
Query 2645 GTCCTTCAAAGTTCTTTGGGTGGACAGGCTAAAACTCTTATGTTTGTCCAAGTCAATCCT 2704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2544 GTCCTTCAAAGTTCTTTGGGTGGACAGGCTAAAACTCTTATGTTTGTCCAAGTCAATCCT 2603
Query 2705 GATGGAGATTCTTATGCTGAGACCGTAAGCACTTTGAAATTCGCTGAAAGGGTTTCTGGT 2764
||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 2604 GATGGCGATTCTTATGCTGAGACAGTAAGCACTTTGAAATTCGCCGAAAGGGTTTCTGGT 2663
Query 2765 GTGGAGTTAGGTGCTGCCAAAAGTAATAAAGAGGGTCGAGATGTCAGACAACTCATGGAA 2824
||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct 2664 GTGGAGTTAGGTGCTGCCAAAAGTAGTAAAGAGGGTCGAGATGTAAGACAACTCATGGAA 2723
Query 2825 CAGGTATCGAACTTGAAGGATGTAATTGCTAAGAAAGATGAAGAGCTTCAAAATTTCCAG 2884
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 2724 CAGGTATCGAACTTGAAGGATGTAATTGCTAAGAAAGATGAAGAGCTACAAAATTTTCAG 2783
Query 2885 AAGCTAAAAGGTAATAATGCAACATCTCTGAAACGTGGACTAAGCAATTTAAGGTTGGTA 2944
||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct 2784 AAGGTAAAAGGTAATAATGCAACATCCCTGAAACGTGGATTAAGCAATTTAAGGTTGGTG 2843
Query 2945 GGGCCTTCATCACCTAGAAGACATTCTATTGGAGCTTCACCTAATGCTCGACGAGGAAAG 3004
|||||| |||||||||||||||||||||||||||| ||||| || |||||||||||||||
Sbjct 2844 GGGCCTACATCACCTAGAAGACATTCTATTGGAGCGTCACCAAACGCTCGACGAGGAAAG 2903
Query 3005 GCCTCTGGTTTATTTGGAAGAGGAACCTCAGATGTTGACAACTGCTCCGAATATAGCAGC 3064
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2904 GCCTCTGGTTTATTTGGAAGAGGAACCTCAGATGTTGACAACTGCTCTGAATATAGCAGC 2963
Query 3065 AAACATTCTGATTCTGGTTCACAACAATCATGTGACGAACGTAAACATCGAAAGGATTTT 3124
|| ||||| |||||||||||||||||||||| |||||||||||||||| ||| |||| |
Sbjct 2964 AAGCATTCGGATTCTGGTTCACAACAATCATCAGACGAACGTAAACATCAAAAAGATTAT 3023
Query 3125 CACCAACCATCTAAGTTTGCTGGAGGGGCGAAAGGAATTGATTTTGATGATGAAGATGTT 3184
|||||||||||||| |||||||| | |||||||||||| |||||||||||||||||||||
Sbjct 3024 CACCAACCATCTAAATTTGCTGGTGCGGCGAAAGGAATCGATTTTGATGATGAAGATGTT 3083
Query 3185 GAACTCGTAGGCCTTGCAGATGCAGATTCTGAGGAAAGATTGAGTGATATCTCTGATAGT 3244
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 3084 GAACTCGTAGGTCTTGCAGATGCAGATTCTGAGGACAGATTGAGTGATATCTCTGATAGT 3143
Query 3245 TGTCTTTCAATGGGAACAGAAACTGATGGATCCATAAGCAGTGCAGTGGAGTTGACTCTA 3304
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 3144 TGTCTTTCAATGGGAACAGAAACTGATGGATCCATAAGCAGTGCAGTAGAGTTGACTCTA 3203
Query 3305 TTCCCTGAAACTGCTAAGCCTCTTGAAATAACAGAACGACCTGAAGCACACATGACCTCT 3364
||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||| |||
Sbjct 3204 TTCCCTGAAACTGCTAAGCCTCTTGAACTAATAGAACGACCTGAAGCACGCATGACTTCT 3263
Query 3365 GAGAAACCCGAGAAATCAGTGAAAATGGGGAAAACTGAGCCAAAAGACAGCAGAACTAAT 3424
||||||| ||||||||||||||||||||||||||| |||||||||||||| | | |||||
Sbjct 3264 GAGAAACTCGAGAAATCAGTGAAAATGGGGAAAACCGAGCCAAAAGACAG-A-A-CTAAT 3320
Query 3425 ATTCCATCGAAGATTCCAAAGCAGACCTTAAAACCACCAGGCCAAACCAGACCGTCTCGT 3484
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 3321 ATTCCATCGAAGATTCCAAAGCAGACCTTGAAACCACCAGGCCAAACCAGACCGTCTCGT 3380
Query 3485 CTGTCAATTGCCACTAGCTCCTCCTCTAAGGCTTTAACAGGTGCTAAAAGACCAACAATT 3544
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 3381 CTGTCAATTGCCACTAGCTCCTCCTCTAAGGCTTTAACAGGTGCTAAAAGGCCAACAATT 3440
Query 3545 AGCACTTCATCTTCAGCGAAACCACTTAACAGAAGGCGGTGAAGACACAAGATTTATCTT 3604
|||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||
Sbjct 3441 AGCACTTCATCTTCAGCGAAACCACTCAATAGAAGGCGGTGAAGACACAAGATTCATCTC 3500
Query 3605 GAGGGCTGGAAGAAGAAGCTTTGTTATGGATTTGATCTGATGGTGTTTGGTAGCTAATTG 3664
|||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||
Sbjct 3501 GAGGGCTGGAAGAAGAAGATTTGTGATGGATTTGATCTGATGTTGTTTGGTAGCTAATTG 3560
Query 3665 TGTAACTAAGCATATGATGTC-TTATTGTTCtttttttGTTAACCTAAATCAAACAAATA 3723
||||||||||||||||||||| || |||||||| ||| ||||| ||| ||||||||| |
Sbjct 3561 TGTAACTAAGCATATGATGTCCTT-TTGTTCTTCTTTC-TTAACATAATTCAAACAAACA 3618
Query 3724 CCTTAACTAAGTTTTCATATGTCTTA 3749
||||||||||||||||||||||||||
Sbjct 3619 CCTTAACTAAGTTTTCATATGTCTTA 3644
Score = 488 bits (264), Expect = 2e-136
Identities = 354/395 (90%), Gaps = 16/395 (4%)
Strand=Plus/Plus
Query 1 AAAAAAGGAGGAACAGTGAGCAAAATCGTGCGACTGGGAAAAATTTCGAATTTTTCTTCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1 AAAAAAGGAGGAACAGTGAGCAAAATCGTGCGACTGGGAAAAATTTCGAATTTTT-TTCT 59
Query 61 CTTCCGGCGAGGGATTCAAACTTCCGCCTCCAATTTCTCGCCGTGAATCTGAGTTTTCTT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 60 CTTCCGGCGAGGGATTCAAACTTCCGCCTCCAATTTCTCGCCGTGAATCTGAGTTTTTTT 119
Query 121 ---C-GTGGAATTTCAATAAAACCAGTCGTCATTCTCCGGCTTCTTGACTCTCGAGAGGT 176
| || | ||||||||| | ||||| |||||||||| | ||| ||| | |||||||
Sbjct 120 TTTCCGTAGCATTTCAATAGGAGCAGTCTTCATTCTCCGTCGTCTACACTATAGAGAGGT 179
Query 177 TTATCTACAAGCTTCTTCTCCTCATTATGGGTTGATTTGGTTTTAGGGTCTTCTCACTAC 236
||||||||||||||||||| ||| |||||| | ||| | ||||||||||| ||||
Sbjct 180 TTATCTACAAGCTTCTTCTTCTCCTTATGGC--G-TTT--T---AGGGTCTTCTCGCTAC 231
Query 237 TATAATTCTGGGAGTCGCGTAATCTCTGAGTTGAAATGAGCAGTCATCTGGGACAGAACG 296
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct 232 TATAATTCTGGGAGTCGCGTAATCTCTGAGTTGAAATGAGCAGTCATCTGTCACAGGACG 291
Query 297 CCAATATGAATGGGGTCTATGTTCGATCAGATGTGTCTAGCATGCTGAGTTTTGACGGAT 356
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 292 CCAATATGAATGGTGTCTATGTTCGATCAGATGTGTCTAGCATGCTGAGTTTTGACGGAT 351
Query 357 CAGATAGTCGTGAAAGC--G-ATGATAGTAAGAAA 388
|||| ||||| ||||| | |||| |||||||||
Sbjct 352 CAGAAAGTCGCGAAAGTATGGATGACAGTAAGAAA 386
> AT2G11280.1 | Symbols: | pseudogene, hypothetical protein |
chr2:4486266-4487577 FORWARD LENGTH=1312
Length=1312
Score = 750 bits (406), Expect = 0.0
Identities = 481/518 (93%), Gaps = 2/518 (0%)
Strand=Plus/Minus
Query 2898 ATAATGCAACATCTCTGAAACGTGGACTAAGCAATTTAAGGTTGGTAGGG-CCTTCATCA 2956
||||||||||||| |||||||||||| ||||||||||||||||||| ||| |||||||||
Sbjct 1195 ATAATGCAACATCCCTGAAACGTGGATTAAGCAATTTAAGGTTGGT-GGGACCTTCATCA 1137
Query 2957 CCTAGAAGACATTCTATTGGAGCTTCACCTAATGCTCGACGAGGAAAGGCCTCTGGTTTA 3016
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1136 CCTAGAAGACATTCTATCGGAGCTTCACCAAATGCTCGACGAGGAAAGGCCTCTGGTTTA 1077
Query 3017 TTTGGAAGAGGAACCTCAGATGTTGACAACTGCTCCGAATATAGCAGCAAACATTCTGAT 3076
|||||||||||||||||| ||||||||||||| | |||||||||||||| ||||| |||
Sbjct 1076 TTTGGAAGAGGAACCTCAAATGTTGACAACTGGTTTGAATATAGCAGCAAGCATTCAGAT 1017
Query 3077 TCTGGTTCACAACAATCATGTGACGAACGTAAACATCGAAAGGATTTTCACCAACCATCT 3136
||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||
Sbjct 1016 TCTGGTTCACAACAATCATCAGACGAACGTAAACATCGAAAAGATTATCACCAACCATCT 957
Query 3137 AAGTTTGCTGGAGGGGCGAAAGGAATTGATTTTGATGATGAAGATGTTGAACTCGTAGGC 3196
|| |||||||| | ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 956 AAATTTGCTGGTGCAGCGAAAGGAATCAATTTTGATGATGAAGATGTTGAACTCGTAGGT 897
Query 3197 CTTGCAGATGCAGATTCTGAGGAAAGATTGAGTGATATCTCTGATAGTTGTCTTTCAATG 3256
|||||||||||||| |||||||| |||||||||||||||||||||||||||||| || ||
Sbjct 896 CTTGCAGATGCAGACTCTGAGGACAGATTGAGTGATATCTCTGATAGTTGTCTTCCAGTG 837
Query 3257 GGAACAGAAACTGATGGATCCATAAGCAGTGCAGTGGAGTTGACTCTATTCCCTGAAACT 3316
|||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 836 GGAACATAAACTGATGGATCCATAAGCAGTGCAGTAGAGTTGACTCTATTCCCTGAAACT 777
Query 3317 GCTAAGCCTCTTGAAATAACAGAACGACCTGAAGCACACATGACCTCTGAGAAACCCGAG 3376
||| ||||||||||||||| |||||||||||||| || |||||| |||||||||| ||||
Sbjct 776 GCTTAGCCTCTTGAAATAATAGAACGACCTGAAGAACGCATGACTTCTGAGAAACTCGAG 717
Query 3377 AAATCAGTGAAAATGGGGAAAACTGAGCCAAAAGACAG 3414
||||||||||||||||||||||| || |||||||||||
Sbjct 716 AAATCAGTGAAAATGGGGAAAACCGAACCAAAAGACAG 679
Score = 289 bits (156), Expect = 2e-76
Identities = 207/231 (90%), Gaps = 5/231 (2%)
Strand=Plus/Minus
Query 3521 ACAGGTGCTAAAAGACCAACAATTAGCACTTCATCTTCAGCGAAACCACTTAACAGAAGG 3580
||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||
Sbjct 276 ACAGGTGCTAAAAGACCAACAATTAGCACTTCATCTTCAGCAAAACCACTCAATAGAAGG 217
Query 3581 CGGTGAAGACACAAGATTTATCTTGAGGGCTGGAAGAAGAAGCTTTGTTATGGATTTGAT 3640
|||||||||||||||||| |||| |||||| ||||||||||| ||||| ||| |||| ||
Sbjct 216 CGGTGAAGACACAAGATTCATCTCGAGGGCGGGAAGAAGAAGATTTGTGATG-ATTTAAT 158
Query 3641 CTGATGGTGTTTGGTAGCTAATTGTGTAACTAAGCATATGATGTC-TTATTGTTCttttt 3699
|||||| |||||||||||||||||||||||||||||||| ||||| || |||||| | ||
Sbjct 157 CTGATGTTGTTTGGTAGCTAATTGTGTAACTAAGCATATCATGTCCTT-TTGTTCGTCTT 99
Query 3700 ttGTTAACCTAAATCAAACAAATACCTTAACTAAGTTTTCATATGT-CTTA 3749
||||| ||| ||||||||| ||||||||||||||||||||| | ||||
Sbjct 98 CC-TTAACATAATTCAAACAAACACCTTAACTAAGTTTTCATATCTACTTA 49
Score = 185 bits (100), Expect = 2e-45
Identities = 108/112 (96%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 3413 AGCAGAACTAATATTCCATCGAAGATTCCAAAGCAGACCTTAAAACCACCAGGCCAAACC 3472
||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct 592 AGCAGAACTAATATTCCATCGAAGATTCCAAAGCAGACCTTGAAACCACCAGGCAAAACC 533
Query 3473 AGACCGTCTCGTCTGTCAATTGCCACTAGCTCCTCCTCTAAGGCTTTAACAG 3524
|||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct 532 AGACCGTCTCGTATGTCAATTGCCACTAGCTCTTCCTCTAAGGCTTTAACAG 481
> AT5G41310.1 | Symbols: | P-loop nucleoside triphosphate hydrolases
superfamily protein with CH (Calponin Homology) domain
| chr5:16516634-16522392 REVERSE LENGTH=2886
Length=2886
Score = 568 bits (307), Expect = 2e-160
Identities = 513/614 (84%), Gaps = 8/614 (1%)
Strand=Plus/Plus
Query 2288 CCTGATGCAAGCATGCATTGTGTGAGATCAACAGAAGATGTTCTTGAACTGATGAATATT 2347
||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||
Sbjct 1717 CCTGATGCAAGCATGCATTCTGTAAGATCAACTGAAGATGTTCTTGAACTGATGAATATT 1776
Query 2348 GGACTAATGAACAGAACCGTGGGTGCTACAGCTCTCAATGAAAGGAGCAGTAGATCACAC 2407
|| | ||||| ||||| || || || ||| | || ||||||| ||| ||||||||||||
Sbjct 1777 GGGTTGATGAATAGAACTGTTGGCGCCACAACCCTTAATGAAAAGAGTAGTAGATCACAC 1836
Query 2408 TGTGTTCTTTCTGTCCATGTACGTGGTGTTGACGTGGAAACCGATTCAATTTTGCGGGGC 2467
|||||||||| || |||||||| |||||||| || |||| || || | ||||| ||
Sbjct 1837 AGTGTTCTTTCGGTTCATGTACGCGGTGTTGATGTTAAAACGGAATCCGTCTTGCGTGGT 1896
Query 2468 AGTTTGCATTTAGTTGACCTTGCAGGAAGTGAGAGGGTTGATCGCTCTGAGGCAACCGGA 2527
||||||||||| ||||| ||||| ||||||||||| |||| ||||||||| | |||||||
Sbjct 1897 AGTTTGCATTTGGTTGATCTTGCTGGAAGTGAGAGAGTTGGTCGCTCTGAAGTAACCGGA 1956
Query 2528 GAGAGACTTAAGGAAGCTCAACATATAAACAAATCATTATCAGCCCTTGGCGACGTCATC 2587
|||||||| || |||||||||||||||||||||||||| || || || || || || ||
Sbjct 1957 GAGAGACTCAAAGAAGCTCAACATATAAACAAATCATTGTCTGCTCTCGGAGATGTTATA 2016
Query 2588 TTTGCTTTAGCGCACAAGAACCCTCATGTTCCGTACAGGAACAGCAAATTGACTCAAGTC 2647
|| ||| |||| || ||||| |||||||| || || || |||||||| | || ||||||
Sbjct 2017 TTCGCTCTAGCACATAAGAATCCTCATGTACCTTATAGAAACAGCAAGCTAACACAAGTC 2076
Query 2648 CTTCA-AAGTTCTTTGGGTGGACAGGCTAAAACTCTTATGTTTGTCCAAGTCAATCCTGA 2706
|| || || |||||| || || || || ||||||||||||||||| ||| | ||||||||
Sbjct 2077 CTCCAGAA-TTCTTTAGGAGGGCAAGCGAAAACTCTTATGTTTGTTCAAATTAATCCTGA 2135
Query 2707 TGGAGATTCTTATGCTGAGACCGTAAGCACTTTGAAATTCGCTGAAAGGGTTTCTGGTGT 2766
|| |||||| ||||||||||| ||||| ||||||||||| || ||||| |||||||||||
Sbjct 2136 TGAAGATTCATATGCTGAGACTGTAAGTACTTTGAAATTTGCGGAAAGAGTTTCTGGTGT 2195
Query 2767 GGAGTTAGGTGCTGCCAAAAG-TAATAAAGAGGGTCGAGATGTCAGACAACTCATGGAAC 2825
||||||||||| || | ||| | |||| || || ||||||| ||||||||||||||||
Sbjct 2196 CGAGTTAGGTGCAGCTAGAAGCT-ATAAGGAAGGAAGAGATGTTAGACAACTCATGGAAC 2254
Query 2826 AGGTATCGAACTTGAAGGATGTAATTGCTAAGAAAGATGAAGAGCTTCAAAA-TTTCCAG 2884
|||||||||||||||| ||| | ||||| |||||||| ||||| |||||||| |||| |
Sbjct 2255 AGGTATCGAACTTGAAAGATATGATTGCCAAGAAAGACGAAGAACTTCAAAAGTTTCAA- 2313
Query 2885 AAGC-TAAAAGGTA 2897
|| | |||| ||||
Sbjct 2314 AA-CATAAATGGTA 2326
Score = 154 bits (83), Expect = 6e-36
Identities = 167/206 (81%), Gaps = 12/206 (6%)
Strand=Plus/Plus
Query 3134 TCTAAGTTTGCTGGAGGGGCGAAAGGA-ATTGATTTTGATGATGAAGATGTTGAACTCGT 3192
||||||||| |||| ||||| ||| || | | | | | || ||| ||| ||||||| |
Sbjct 2488 TCTAAGTTTTCTGGTGGGGCTAAA-GACAAT-AATAT-AT-TTGAGGATACTGAACTCTT 2543
Query 3193 AGGCCTTGCAG-ATGCAGATTCTGAGGAAAGATTGAGTGATATCTCTGATAGTTGTCTTT 3251
||| ||| || || || || |||||||||||||||||||||||| |||||||||||||
Sbjct 2544 AGGTTTTGAAGAAT-CAAATAATGAGGAAAGATTGAGTGATATCTCAGATAGTTGTCTTT 2602
Query 3252 CAATGGGAACAGAAACTGATGGATCCAT-A--AGCAGTGCAGTGGAGTTGACTCTATTCC 3308
|||||||||||||||||||||| || || | ||| ||||| |||||||||| || ||||
Sbjct 2603 CAATGGGAACAGAAACTGATGGCTCGATTAGTAGCGGTGCAATGGAGTTGACACTCTTCC 2662
Query 3309 CTGAAAC-TGCTAAGCCTCTTGAAAT 3333
||||||| | | || |||| ||||||
Sbjct 2663 CTGAAACCT-CAAATCCTCCTGAAAT 2687
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 186721361846
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5