BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475009
Length=2568
Score E
Sequences producing significant alignments: (Bits) Value
AT1G63430.2 | Symbols: | Leucine-rich repeat protein kinase fa... 3118 0.0
AT5G41180.1 | Symbols: | leucine-rich repeat transmembrane pro... 833 0.0
> AT1G63430.2 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr1:23522497-23526832 FORWARD LENGTH=2847
Length=2847
Score = 3118 bits (1688), Expect = 0.0
Identities = 1909/2012 (95%), Gaps = 29/2012 (1%)
Strand=Plus/Plus
Query 1 TTATTGCTAAATCAATCATATAATCTTGTCCACTTTCACTTCTC-TTTACCATTTCCTTG 59
|||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||
Sbjct 123 TTATTGCTAAATCAATCAAATAATCTTGTCCAGTTTCACTTCTCTTTTACCATTTCCTTG 182
Query 60 TTCCATTCTTCAGCTtctctctctctcGTTCTTTACTTTGCTAATCTTGGTCTCTTCTTG 119
|||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||
Sbjct 183 TTCCATTCTTCAGCTTCTCTCTCTCTCGCTCTTTACTTTACTAAACTTGGTCTCTTCTTG 242
Query 120 AGCTTAAAACATCTCATTTCTGC--AGAGTACTTCTCAAAGAAAG-T-TC-TC-TTCT-- 171
||||| | ||||||||||||||| ||||||||| |||||||||| | || || ||||
Sbjct 243 AGCTT-ATACATCTCATTTCTGCAGAGAGTACTTGTCAAAGAAAGTTGTCGTCTTTCTCC 301
Query 172 ---TTC-TC--CAG---AT--TGTTGATCCTCCGTGAAAGAATCTGGGTTCCGCTTCttt 220
||| || || || |||||||| ||||||||||||||| ||||||||||| ||
Sbjct 302 AGATTCTTCTTGAGCTTATACTGTTGATCATCCGTGAAAGAATCTAGGTTCCGCTTC-TT 360
Query 221 ttttAATGAGTCGAATTTGAAGGAATCTTTCGAA-AGACGATGAGATCGAAG---TTTTG 276
|||||||||| |||||||||||||||||||| || ||||||||||||||||| |||||
Sbjct 361 TTTTAATGAGCCGAATTTGAAGGAATCTTTC-AACAGACGATGAGATCGAAGTATTTTTG 419
Query 277 GTCGTTAGCCCTTGTTCTT-GTGCTCTTCTTCGTTTCTTGTGATGGGTTTGCCTCTAATG 335
|||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 420 TTCGTTAGCTCTTGTTCTTGGT-CTCTTCTTCGTTTCTTGTGATGGGTTTGCCTCTAATG 478
Query 336 AAGTTGGAGCACTTAGGAGATTCAAGGAAGCTATCTATGAGGACCCTTTGCTAGTTATGT 395
||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 479 AAGTTCAAGCACTTAGAAGATTCAAGGAAGCTATCTATGAGGACCCTTTGCTAGTTATGT 538
Query 396 CTAATTGGAATGACCCCAATTCAGATCCTTGTGATTGGACCGGCATTAATTGCTCTCCAT 455
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 539 CTAATTGGAATGACCCCAATTCAGATCCTTGTGATTGGACCGGCATTTATTGCTCTCCAT 598
Query 456 CTAAAGATCATGTTATCAAGATAAATATATCGGCTTCATCGATAAAAGGGTTTCTTGCGC 515
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 599 CTAAAGATCATGTTATCAAGATAAATATATCCGCTTCATCGATAAAAGGGTTTCTTGCGC 658
Query 516 CGGAACTGGGTCAAATCACCTACCTGCAGGAACTAATCCTACATGGGAACATTTTAATCG 575
||||| |||||||||| || ||||||||||||||||||||||||||||||||| |||| |
Sbjct 659 CGGAATTGGGTCAAATAACGTACCTGCAGGAACTAATCCTACATGGGAACATTCTAATAG 718
Query 576 GGACAATACCTAAGGAGATAGGAAACCTAAAGAATCTCAAGATCTTGGACTTGGGAAACA 635
|||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct 719 GGACAATACCTAAGGAGATAGGAAACTTAAAGAATCTCAAAATCTTGGACTTGGGAAACA 778
Query 636 ACCATCTGATGGGACCGATCCCAGCAGAGATCGGGAGTTTGTCCGGCATCATGATAATAA 695
| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 779 ATCATCTTATGGGACCGATCCCTGCAGAGATCGGGAGTTTGTCCGGCATCATGATAATCA 838
Query 696 ACCTTCAGTCCAATGGTTTGACTGGAAAGTTGCCTGCAGAGCTCGGTAACTTGAAGTACC 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 839 ACCTTCAGTCCAATGGTTTGACTGGAAAGTTGCCTGCAGAGCTCGGTAACTTGAAGTACC 898
Query 756 TTAGAGAACTTCATATTGACAGGAATAGGCTTCAAGGAAGTCTTCTTGTAGCTGGAGCAT 815
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 899 TTAGAGAACTTCATATTGACAGGAATAGGCTTCAAGGAAGTCTTCTTGTTGCTGGAGCAT 958
Query 816 CGGGCTATCAGTCGAAAGTGTATTCTTCAAATTCAAGTGCAAACATCGCCGGTTTGTGCA 875
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 959 CGGGCTATCAGTCGAAAGTGTATTCTTCAAATTCAAGTGCAAACATCGCTGGTTTGTGCA 1018
Query 876 AGTCTCTAAAAGTAGCCGATTTTTCATACAACTTTTTTGTGGGAAACATTCCAAAATGTT 935
| ||| |||||||||| || ||||||||||||||||| |||||||| |||||||||||||
Sbjct 1019 AATCTTTAAAAGTAGCTGACTTTTCATACAACTTTTTCGTGGGAAATATTCCAAAATGTT 1078
Query 936 TAGACTACCTTCCAAGAACGAGCTTTCAAGGGAACTGCATGCAAAACAAGGATCTTAAGC 995
|||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1079 TAGAAAACCTTCCAAGGACGAGCTTTCAAGGGAACTGCATGCAAAACAAGGATCTTAAGC 1138
Query 996 ATAGACCTTCTTCCCAATGCGGTAATGCACAACTGGTCAAAACTCATGGAAGCCCGAGCG 1055
||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1139 ATAGATCTTCTTCCCAATGCGCTAATGCACAACTGGTCAAAACTCATGGAAGCCCGAGCG 1198
Query 1056 CCGCCCCTAAGCACCAGTCAGCTCAAATGGTGGCTAAGCACCATAGAGCATCAAAACCTA 1115
| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1199 CTGCTCCTAAGCACCAATCAGCTCAAATGGTGGCTAAGCACCATAGAGCATCAAAACCTA 1258
Query 1116 AATGGCTTCTAGCTCTTGAGATAGTCACAGGGTCAATGGTTGGTTTGCTCCTCCTGGTTG 1175
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1259 AATGGCTTCTAGCTCTTGAGATAGTCACAGGGTCAATGGTTGGTTTGCTCCTTCTGGTTG 1318
Query 1176 CACTTTTCTCAGCAGTTCATCGCTGGAACAACAGATCATCTCTCATCATTCCTTGGAAAA 1235
|||||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| |
Sbjct 1319 CACTTTTCTCTGCAGTTCACCGCTGGAACAATAGATCAACTCTCATCATTCCTTGGAAGA 1378
Query 1236 AATCTTCAAGTGAAAAGGAAAAGTTCACAGTCTACGTAGATTCTGAAATGCTGAAGGATG 1295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1379 AATCTTCAAGTGAAAAGGAAAAGTTCACAGTCTACGTAGATTCTGAAATGCTGAAGGATG 1438
Query 1296 TTTCGAGATTAACAAGACAAGAGCTCGAAGTGGCGTGTGAAGACTTTAGCAATATCATTG 1355
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1439 TTTCGAGATTAACAAGACAAGAGCTCGAAGTGGCGTGTGAAGACTTTAGCAACATCATTG 1498
Query 1356 GTTTATCTGCAGATAGTCAGATCTATAAAGGAACACTGAAAGGTGGGTCTGAGATTGCCG 1415
||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct 1499 GTTTATCAGCAGATAGTCAGATCTATAAAGGAACGCTGAAAGGTGGGTCTGAGATTGCGG 1558
Query 1416 TGATCTCTCTTTGTGTAAAGGAAGAAGATTGGACTGGATATCTTGAGCTCTATTTCCAGA 1475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1559 TGATCTCTCTTTGTGTAAAGGAAGAAGATTGGACTGGATATCTTGAGCTCTATTTCCAGA 1618
Query 1476 GAGAGGCTGCAGATTTGGCTAGATTAAACCACGAGAACACAGCCAAATTACTTGGATATT 1535
|||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1619 GAGAGGTTGCAGATTTGGCTAGATTAAACCACGAGAACACAGCGAAATTACTTGGATATT 1678
Query 1536 GTAAAGAGATCTCACCATTTACAAGAATGCTTGTTTTTGAGTATGCATCAAACGGAACAC 1595
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1679 GCAAAGAGATCTCACCATTTACAAGAATGCTTGTTTTTGAGTATGCATCAAACGGAACAC 1738
Query 1596 TATACGAGCACCTCCACTATGGGGAAGCGGCTTTAGTATCGTGGGCAAGACGGATGAAGA 1655
|||| |||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 1739 TATATGAGCACCTTCACTACGGGGAAGCGGCGTTAGTATCGTGGGCAAGACGGATGAAGA 1798
Query 1656 TTGTTATAGGCATCGCACGTGGTCTCAAGTACCTTCATATGGAACTTGATCCTCCATTTA 1715
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1799 TTGTTATAGGCATCGCACGTGGTCTCAAGTACCTTCATATGGAACTTGATCCTCCGTTTA 1858
Query 1716 CAATCTCTGAGCTGAGCTCAAACGCAATCTATCTCACAGAAGACTTTACTCCCAAGTTGG 1775
|||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||
Sbjct 1859 CAATCTCTGAGCTGAGCTCAAACGCAATTTATCTCACAGAAGATTTTACTCCCAAGCTGG 1918
Query 1776 TTGATTTTGAATGCTGGAAGACGATTCTTGCGAGATCAGAAAAGAATTTGAGAAATATTA 1835
||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 1919 TTGATTTCGAATGCTGGAAGACAATTCTTGCAAGATCAGAAAAGAATTTGAGAAATATTA 1978
Query 1836 GTAGCCAGGGTTCGATATGTGTGCTCCCAAACGGAATGGAGAGCCGATATCTTGATGTGT 1895
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1979 GTAGCCAGGGTTCGATATGTGTACTCCCAAACGGAATGGAGAGCCGATATCTTGATGTGT 2038
Query 1896 CGGGTAATATCTATGCATTTGGCATTCTTTTGCTGGAAATTGTCAGTGGAAGACCTCCCT 1955
||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |
Sbjct 2039 CGGGTAATATCTATGCATTCGGGATTCTTTTGCTGGAAATTGTCAGTGGAAGACCTCCTT 2098
Query 1956 ATTGCAAAGACAAAGGTTTCTTAATTGAATGG 1987
|||||||||||||||| |||||||||||||||
Sbjct 2099 ATTGCAAAGACAAAGGATTCTTAATTGAATGG 2130
Score = 867 bits (469), Expect = 0.0
Identities = 547/583 (94%), Gaps = 12/583 (2%)
Strand=Plus/Plus
Query 1987 GGCAAAGGAGTTCCTTGAAGCACCAGAGGCAATGGCGGGATTGGTGGATCCAGAGCTGAA 2046
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2202 GGCAAAGGAGTTCCTTGAAGCACCAGAGGCAATGTCGGGATTGGTGGATCCAGAGCTGAA 2261
Query 2047 ACATTTTAACCAAGAAGAGCTTGAGACGGTATGCGAAGTGGCAAGCCAATGCTTGAACAG 2106
|||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |
Sbjct 2262 ACATTTTAACCAAGAAGATCTTGAGACGGTATGCGAAGTGGCTAGCCAATGCTTGAACCG 2321
Query 2107 GGACCCGACcaacaacaacaacaataacaacaaGCCCTCAGTGCAAGAGCTATGCGAGAC 2166
|||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2322 GGACCCAACCAACAACAACAACAATCACAACAAGCCCTCAGTGCAAGAGCTATGCGAGAC 2381
Query 2167 ATTGGAGAGTAGAATCAGTCTGTCAATTTCTGCAGAGCTAAGATCATCTTCTTTGGCTTG 2226
||||||||| |||||||||||||| ||||| || ||||| ||||||||||||||||||||
Sbjct 2382 ATTGGAGAGCAGAATCAGTCTGTCTATTTCAGCGGAGCTTAGATCATCTTCTTTGGCTTG 2441
Query 2227 GGCCGAGCTGGCGCTTGACTCGTGATGAGAATGGTgaaagaagaaaggaaagaaaaaaga 2286
||||||||||||||||||||||||||||||||| |||||| ||||| ||| | ||
Sbjct 2442 GGCCGAGCTGGCGCTTGACTCGTGATGAGAATGATGAAAG--GAAAG-AAA-AC----GA 2493
Query 2287 GTGTTGAATGATGCAATGCTAACTAACTAAAAACCAAACCCTCAACTCTGTAAATCAATC 2346
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2494 GTGTTGAATGATGCAATGCTAACTAACTAAAAACCAAACTCTCAACTCTGTAAATCAATC 2553
Query 2347 GACTGATTACAACATTTGATAttgttttgtttttgctctgatcttgacgagtgtgtttgt 2406
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct 2554 GACTGATTACAACATTTGATATTGTTTT-TTTTTGCTCTGATCTTGACGAGTGTGTCTGT 2612
Query 2407 gttcttgattagttttgtgttttgGGTG-TTCAAAGTGTTTGTAAAGGAAGAGATGAACA 2465
||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||
Sbjct 2613 GTTCTTGATTAGTTTTGAGTTTTGGGTGGTTCAAAGTGTTTGTAAATGAAGAGATGAACA 2672
Query 2466 TAGAGTTTCTGAAAGATTTTCTCTATTATTTGGAAATCTATGAGAGGTTGAAGAATGTTA 2525
||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2673 TAG--TTTCTGAAAGATTTTCTCTATTATTTGAAAATCTATGAGAGGTTGAAGAATGTTA 2730
Query 2526 ATATAGTATGTTTGGATCTATCCTTTTATCTTATGTTACATAG 2568
|| |||| |||||||||||| ||||| ||||||| ||| ||||
Sbjct 2731 ATGTAGTGTGTTTGGATCTAACCTTTAATCTTATATTATATAG 2773
> AT5G41180.1 | Symbols: | leucine-rich repeat transmembrane protein
kinase family protein | chr5:16483871-16487426 FORWARD
LENGTH=2367
Length=2367
Score = 833 bits (451), Expect = 0.0
Identities = 949/1183 (80%), Gaps = 59/1183 (5%)
Strand=Plus/Plus
Query 1097 CATAGAGCATCAAAACCTAA-ATGGCTTCTAG-CTCTTGAGATAGTCACAGGG-TCAAT- 1152
||| ||||||| | | | || |||||||| | | ||||||||||||| ||| || ||
Sbjct 979 CATCGAGCATCGAGA-CAAACATGGCTTC-GGAATTTTGAGATAGTCAC-GGGATC-ATC 1034
Query 1153 GGTTGGTTTGCTCCTCCTGGTTGCACTTTTCTCAGCA-GT-TCATCGCTGGAACAACAGA 1210
||||| |||||| | || || | | | ||||| ||| || | | | || || || | |
Sbjct 1035 AGTTGGCTTGCTCTTTCTAGTCGTAATGTTCTCTGCATGTAGC-TTG-TGCAA-AATAAA 1091
Query 1211 TC-ATCTCTCATCATTCCTTGGAAAAAATCTTCAAGTGAAAAGGAAAAGTTCACAGTCTA 1269
| ||||||||| |||| ||||| |||||| ||||||||||||| |||||||| |||||
Sbjct 1092 GCGCTCTCTCATCGTTCCCTGGAAGAAATCTGCAAGTGAAAAGGAGAAGTTCACGGTCTA 1151
Query 1270 CGTAGATTCTGAAATGCTGAAGGATGTTTCGAGATTA-ACAAGACAAGAGCTCGAAGTGG 1328
||| |||||||||||||||||||||||||| ||| || |||||||||||||| ||||| |
Sbjct 1152 CGTTGATTCTGAAATGCTGAAGGATGTTTCAAGA-TATACAAGACAAGAGCTAGAAGTAG 1210
Query 1329 CGTGTGAAGACTTTAGCAATATCATTGGTT-TATCTGCAGATAGTCAGATCTATAAAGGA 1387
| ||||||||||| ||||| ||||||| || || |||||| |||||||| || ||||||
Sbjct 1211 CATGTGAAGACTTCAGCAACATCATTGATTCTA-GTGCAGAGAGTCAGATTTACAAAGGA 1269
Query 1388 AC-ACTGAAAGGTGGGTCTGAGATTGCCGTGATCTCTCTTTGTG-TAAAGGAAGAAGATT 1445
|| | | ||||| ||| ||||||| || || |||||||| || | |||| |||||| |||
Sbjct 1270 ACGA-TCAAAGGCGGGACTGAGATCGCGGTTATCTCTCTCTGCGTTAAA-GAAGAAAATT 1327
Query 1446 GGACTGGATATCTTGAGCTCT-ATTTCCAGAGAGAGGCTGCAGATTTGGCTAGATTAAAC 1504
||||||||||||||||||| | ||||||||||||||| ||| | ||||||||||||||||
Sbjct 1328 GGACTGGATATCTTGAGCT-TAATTTCCAGAGAGAGGTTGCGGCTTTGGCTAGATTAAAC 1386
Query 1505 CACGAGAACACAGCCAAATTACTTGGATATTGTAAAGAGATCT-CACCATTTACAAGAAT 1563
|| ||||| | | |||||||| ||||| |||||||||| | |||| || ||||||||
Sbjct 1387 CATGAGAATGCGGGGAAATTACTGGGATACTGTAAAGAGA-GTACACCGTTCACAAGAAT 1445
Query 1564 GCTTGTTTTTGAGTATGCATCAAACGGAACACTATACGAGCACCTCCACTATGGGGAAGC 1623
|||||| |||||||||||||||||||| ||||||||||| || |||||||||| ||| |
Sbjct 1446 GCTTGTGTTTGAGTATGCATCAAACGGGACACTATACGACCATCTCCACTATGCGGACG- 1504
Query 1624 GG-CTTTAGTATCGTGGGCAAGACGGATGAAGATTGTTATAGGCATCGCACGTGGTCTCA 1682
|| ||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||
Sbjct 1505 GGAGTTTAGTATCGTGGGCAAAACGCATGAAAATTGTTATAGGCATCGCACGTGGTCTCA 1564
Query 1683 AGTACCTTCATA-TGGAACTTGATCCTCCATTTACAATCTCTGAGCTGAGCTCAAAC-GC 1740
|||||||||||| || |||| |||||||||||||| |||||||| ||||||||| | ||
Sbjct 1565 AGTACCTTCATACTG-AACTCCATCCTCCATTTACAGTCTCTGAGTTGAGCTCAA-CTGC 1622
Query 1741 AATCTATCTCACAGAAGACTTTACTCCCAAGTTGGTTGATTTTGAATGCTGGAAGACGAT 1800
| | |||||||| ||||| ||||||||||| |||||||||| ||||||||||||| ||
Sbjct 1623 AGTGTATCTCACTGAAGATTTTACTCCCAAACTGGTTGATTTCGAATGCTGGAAGATTAT 1682
Query 1801 TCTTGCGAGATCAGAAAAGAATTTGA-GAAATAT-TAGTAGCCAGGGTTCGATATGTGTG 1858
|| | ||||||||| ||||| ||| ||| ||| | ||| | || | ||||||||
Sbjct 1683 TCAGGTGAGATCAGAGAAGAACCTGAAGAA-TATCT-GTAATGAAGGAGCAATATGTGTA 1740
Query 1859 CT-CCCAAACGGAATGGAG-AGCCGATATCTTGATGTGTC--GGGTAATATCTA-TGCAT 1913
|| ||||| | |||||| | |||| || | ||| | | ||| |||||||| | |||
Sbjct 1741 CTTCCCAAT-GCAATGGAACA-CCGAGATATGGATTTA-CAAGGG-AATATCTACT-CAT 1795
Query 1914 TTGGCATTCTTTTGCTGGAAATTGTCAGTGGAAGACCTCCCTATTGCAAAGACAAAGGTT 1973
||||||| ||||||||||||||||| || ||||||||| | |||||| |||||| |||||
Sbjct 1796 TTGGCATACTTTTGCTGGAAATTGTAAGCGGAAGACCTTCTTATTGCCAAGACAGAGGTT 1855
Query 1974 TCTTAATTGAATGGGCAAAGGAGTT---CCTTGAAGCACCAGAGGCAATGGCGGGATTGG 2030
||| ||||||||| || |||| ||||| |||||||| | ||||| | ||||
Sbjct 1856 GCTTGGTTGAATGGGTAAGGGAGAAAAACCTTGGTGCACCAGATGTGATGGCTAGCTTGG 1915
Query 2031 TGGATCCAGAGCTGAAACATTTTAACCAAGAAGAGCTTGAGACGGTATGCGAAGTGGCAA 2090
||||||| ||||| || ||||| || ||| |||| |||||| | ||||| ||||||||||
Sbjct 1916 TGGATCCTGAGCTCAAGCATTTCAAGCAAAAAGAACTTGAGGCAGTATGTGAAGTGGCAA 1975
Query 2091 GCCAATG-CTTGAACAGGGACCCGACc-aacaacaacaacaataa-caa-caaGCCCTCA 2146
||||||| || |||| ||||| || || || | ||| |||| | | | | |
Sbjct 1976 GCCAATGTCT-GAACTTGGACCAGAATGAAAAAGA-CAAGGATAAGCTTTCTTGTTCG-A 2032
Query 2147 GTGCAAGAGCTATGCGAGACATTGGAGAGTAGAATCAGTCTGTCAATTTCTGCAGAGCT- 2205
| |||| ||| || |||||| | ||||||||||||| | |||| ||||||||||| |
Sbjct 2033 TT-CAAGCGCTTTGTGAGACACTAGAGAGTAGAATCACTGTGTCCATTTCTGCAGAATTC 2091
Query 2206 AAGATCATCTTCTTTGGCTTGGGCCGAGCTGGCGCTTGACTCG 2248
|| ||| |||||| |||| ||||||||||| ||||| | ||||
Sbjct 2092 AA-ATCGTCTTCTCTGGCGTGGGCCGAGCTAGCGCTGGCCTCG 2133
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 127474202163
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5