BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475059
Length=2792
Score E
Sequences producing significant alignments: (Bits) Value
AT1G62950.1 | Symbols: | leucine-rich repeat transmembrane pro... 4255 0.0
AT1G12460.1 | Symbols: | Leucine-rich repeat protein kinase fa... 2012 0.0
> AT1G62950.1 | Symbols: | leucine-rich repeat transmembrane protein
kinase family protein | chr1:23315294-23318234 FORWARD
LENGTH=2846
Length=2846
Score = 4255 bits (2304), Expect = 0.0
Identities = 2662/2830 (94%), Gaps = 44/2830 (2%)
Strand=Plus/Plus
Query 1 ATGCAAATTGGGAAATTGATTTGGG---TAATGTTCACATTCGTTTAC---ATTATTACA 54
||||| ||||||||||||||||||| ||||||||| ||||||| || |||||||||
Sbjct 1 ATGCAGATTGGGAAATTGATTTGGGTAATAATGTTCATATTCGTTCACATTATTATTACA 60
Query 55 TCTTCTCCG-AGTTTCTCGGTTTCTATTATTACCGAACGAGAGATTCTACTTCAATTCAG 113
|| ||| || |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 61 TCATCT-CGAAGTTTCTCGGATTCTATTATTACCGAACGAGAGATTCTACTTCAATTCAA 119
Query 114 AGACAACATCAACGATGATCCGTACAACAGTTTAGCTTCTTGGGTCTCCAATGGTGATCT 173
|||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||
Sbjct 120 AGACAACATCAACGATGATCCGTACAACAGTTTAGCTTCTTGGGTCTCTAATGCTGACCT 179
Query 174 TTGTAATAGCTTCAATGGTGTATCTTGTAACCGAGAAGGATTCGTCGAAAAGATCGTTCT 233
||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 180 CTGTAACAGCTTCAATGGTGTATCTTGTAACCAAGAAGGATTCGTCGAAAAGATCGTTCT 239
Query 234 TTGGAACACAAGTCTCGCCGGAACCCTAACGCCGGCATTGTCTGGTTTAACTTCTTTAAG 293
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 TTGGAACACTAGTCTCGCCGGAACCCTAACGCCGGCATTGTCTGGTTTAACTTCTTTAAG 299
Query 294 GGTTTTGACTCTGTTTGGCAACAGTTTTACAGGTAAGTTACCGTTGGATTACTCAAAGTT 353
|||||||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||
Sbjct 300 GGTTTTGACTCTGTTTGGCAACAGGATTACAGGTAATTTACCTTTGGATTACTTAAAGTT 359
Query 354 ACAGACTTTATGGAAGATCAATGTTAGTTCCAATGCATTGTCTGGTTCGATTCCTGAATT 413
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 360 ACAGACTTTATGGAAGATCAATGTTAGTTCCAATGCATTGTCTGGTTTGGTTCCTGAATT 419
Query 414 TATCGGTGATTTGCCTAATTTAAGGTTCTTGGATTTGTCGAAAAATG-GTTTCTTTGGAG 472
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 420 TATCGGTGATTTGCCTAATTTAAGGTTCTTGGATTTGTCGAAAAATGCG-TTCTTTGGAG 478
Query 473 AGATTCCGAGTTCTCTGTTTAAATTCTGCTT-CAAGACCAAGTTTGTTTCATTGTCTCAT 531
||||||| | |||||||||||||||||| || |||||| |||||||||||||||||||||
Sbjct 479 AGATTCCAAATTCTCTGTTTAAATTCTG-TTACAAGACAAAGTTTGTTTCATTGTCTCAT 537
Query 532 AACAATCTCTCAGGATCTATCCCGGAATCAATCGTAAACTGTAACAATCTCATCGGCTTC 591
||||||||||||||||| ||||| ||||||||||||||||||||||||||||| || |||
Sbjct 538 AACAATCTCTCAGGATCAATCCCTGAATCAATCGTAAACTGTAACAATCTCATTGGTTTC 597
Query 592 GATTTCTCTTACAATGGCATTACCGGTTTGTTGCCTCGAATCTGCGATATTCCGGTTCTT 651
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 598 GATTTCTCTTACAATGGCATTACCGGTTTGTTGCCTCGGATCTGCGATATTCCGGTTCTT 657
Query 652 GAGTTTGTATCCGTTAGAAGAAATGTGTTGTCTGGTGATGTGTTTGAGGAGATATTGAAG 711
||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct 658 GAGTTTGTATCTGTTAGAAGAAATTTGTTGTCTGGTGATGTGTTTGAGGAGATATCGAAG 717
Query 712 TGCAAGAGATTGAGCCATGTGGATATAGGAAGCAATTCTTTCGATGGAGTAGGGTCTTTC 771
|| ||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct 718 TGTAAGAGATTGAGTCATGTCGATATAGGAAGCAATTCTTTCGATGGAGTAGCGTCTTTC 777
Query 772 GAGGTTCTTGGATTCAAGAACATAACTTATTTCAATGTGTCTGGAAACCGGTTTACCGGG 831
|||||| |||||||||||||| | |||||||| |||||||||||||||||||||| |||
Sbjct 778 GAGGTTATTGGATTCAAGAACCTGACTTATTTTAATGTGTCTGGAAACCGGTTTAGAGGG 837
Query 832 GAGATTGGTGAGATTGTTGATTGTAGTGAAAGTTTGGAGTTTTTGGATGCTTCTTCGAAT 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 838 GAGATTGGTGAGATTGTTGATTGTAGTGAAAGTTTGGAGTTTTTGGATGCTTCTTCGAAT 897
Query 892 GAGTTAACGGGTAATGTACCTAGCGGTATAACCGGATGCAAAAGTCTTAAGCTTTTGGAC 951
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 898 GAGTTAACTGGTAATGTACCTAGCGGTATAACCGGATGCAAAAGTCTTAAGCTTTTGGAC 957
Query 952 CTGGAATCGAATAAGCTCAATGGGAGTGTACCTGCAGGTATGAGGAAGATGGAGAAGCTC 1011
|||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct 958 TTGGAATCGAATAGGCTCAATGGGAGTGTACCTGTAGGTATGGGGAAGATGGAGAAGCTC 1017
Query 1012 TCTGTGATCAGATTAGGCGATAACTTTATAGATGGGAAGATACCGCTCGAGCTCGGAAAT 1071
||||||||||| ||||||||||||||||||||||||||| |||| || ||||||||||||
Sbjct 1018 TCTGTGATCAGGTTAGGCGATAACTTTATAGATGGGAAGCTACCACTTGAGCTCGGAAAT 1077
Query 1072 CTTGAGTATCTACAGGTTTTGAATTTGCATAATCTCAATCTCATTGGTGAAATACCAGAG 1131
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1078 CTTGAGTATCTACAGGTTTTGAATTTGCATAATCTCAATCTCGTTGGTGAAATACCAGAG 1137
Query 1132 GATTTATCAAATTGCAGACTACTTCTTGAACTAGATGTTTCTGGGAATGCTTTAGAAGGA 1191
||||||||||| |||||||||||||||||||||||||||||||| |||| ||| ||||||
Sbjct 1138 GATTTATCAAACTGCAGACTACTTCTTGAACTAGATGTTTCTGGAAATGGTTTGGAAGGA 1197
Query 1192 GAGATCCCTAAGAATCTATTGAACTTAACAAACTTAGAGATCCTTGATCTGCATCGGAAC 1251
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1198 GAGATCCCTAAGAATCTATTGAACTTAACAAACTTAGAGATTCTTGATCTGCATCGGAAC 1257
Query 1252 CGAATCAGTGGAAGCATTCCGCCTAATCTTGGGAACCTCTCGAGAATCCAGTTCCTCGAT 1311
||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct 1258 CGAATCAGTGGAAACATTCCGCCTAATCTCGGGAGCCTCTCGAGAATCCAGTTCCTCGAT 1317
Query 1312 CTTTCAGAGAATTTGCTTTCTGGTCCTATCCCGTCTTCTCTCAG-GAATTTGAATAGACT 1370
|||||||||||||||||||||||||||||||||||||| ||| | ||||||||| |||||
Sbjct 1318 CTTTCAGAGAATTTGCTTTCTGGTCCTATCCCGTCTTCCCTC-GAGAATTTGAAAAGACT 1376
Query 1371 GACACATTTCAATGTTTCTTACAACAACCTCTCCGGCATTATTCCAAAGATTCAAGCTTC 1430
||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1377 GACTCATTTCAATGTTTCTTACAACAACCTCTCCGGCATTATCCCAAAGATTCAAGCTTC 1436
Query 1431 GGGAGCTTCTTCGTTTTCCAACAACCCTTTCCTCTGCGGTGATCCTCTTGAAACACCGTG 1490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1437 GGGAGCTTCTTCGTTTTCCAACAACCCTTTCCTCTGCGGTGATCCTCTTGAAACACCGTG 1496
Query 1491 CAATGCTCTCAGAACTGGATCAAGATCAAGAAAAACCAAAGCTCTAAGCACCTCTGTTAT 1550
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1497 CAATGCTCTCAGAACCGGATCAAGATCAAGAAAAACCAAAGCTCTAAGCACCTCTGTTAT 1556
Query 1551 CATTGTTATCATCGCTGCTGCTGCGATCTTGGCTGGTATCTGTCTAGTGCTTGTTTTGAA 1610
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct 1557 CATTGTTATCATCGCTGCTGCTGCGATCTTGGTTGGTATCTGTCTAGTGCTTGTCTTGAA 1616
Query 1611 CCTTAGGGCTCGTAAAAGACGGAAAAAGCCTGAAGAAGAAATAGTCACTTTTGATAACAC 1670
|||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 1617 CCTTAGAGCTCGTAAAAGACGGAAAAAGCGTGAAGAAGAAATAGTCACTTTTGATACCAC 1676
Query 1671 AACACCCACACAGGCGTCAACGGAATCTGGTAATGGTGGTGTAACATTCGGGAAACTTGT 1730
||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1677 AACACCCACTCAGGCTTCAACGGAATCTGGTAATGGTGGTGTAACATTTGGGAAACTTGT 1736
Query 1731 TCTATTCAGCAAGAGTTTGCCTTCAAAGTATGAAGATTGGGAGGCGGGTACAAAAGCATT 1790
||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||
Sbjct 1737 TCTATTCAGCAAGAGTTTGCCTTCAAAATATGAAGATTGGGAGGCAGGTACGAAAGCATT 1796
Query 1791 ACTCGACAAGGATAACATTATCGGTATTGGATCAGTTGGAGTGGTTTATAGAGCATCTTT 1850
||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct 1797 GCTCGACAAGGATAACATTATCGGTATTGGATCAATTGGAGCGGTTTATAGAGCATCTTT 1856
Query 1851 CGAAGGCGGGGTTTCCATTGCAGTGAAAAAGCTCGAGACTCTAGGAAGAATCAGAAGCCA 1910
|||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||
Sbjct 1857 CGAAGGCGGGGTTTCCATCGCAGTGAAAAAGCTCGAGACTCTAGGTAGAATCAGAAACCA 1916
Query 1911 AGAAGAGTTTGAGCAAGAAATCGGAAGGCTTGGAAGTTTAAGTCACCCGAATCTTGCTTC 1970
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1917 AGAAGAGTTTGAGCAAGAAATAGGAAGGCTTGGAAGTTTAAGTCACCCGAATCTTGCTTC 1976
Query 1971 TTTTCAAGGTTACTACTTTTCCTCGACAATGCAGTTAATTCTTTCTGAATTTGTCACAAA 2030
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1977 TTTTCAAGGTTACTACTTTTCCTCCACAATGCAGTTAATTCTTTCTGAATTTGTCACAAA 2036
Query 2031 CGGAAGCCTT-TATGATAATCTACACCCGAGAATCTCTCATAGAACCAGCAGTAGCAGCA 2089
||||||| || || |||||||||||||||||| |||| |||||||| |||||||||||||
Sbjct 2037 CGGAAGC-TTGTACGATAATCTACACCCGAGAGTCTCCCATAGAACTAGCAGTAGCAGCA 2095
Query 2090 GCAGCCATGGAAACACCGAGTTAGATTGGCATAGAAGATTCCAAATAGCAGTAGGAACTG 2149
||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |
Sbjct 2096 GCAGCCATGGAAACACCGAGTTAAATTGGCATAGAAGATTTCAAATAGCAGTAGGAACCG 2155
Query 2150 CAAAGGCGCTTTCTTTTCTTCACAACGATTGTAAACCCGCGATTCTTCATCTCAATATAA 2209
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2156 CAAAGGCGCTTTCTTTTCTTCACAACGATTGTAAACCCGCGATTCTTCATCTCAATGTAA 2215
Query 2210 AGTCTACCAACATTCTCCTTGATGAAGGATACGAGGCAAAGCTATCAGATTACGGTTTGG 2269
||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2216 AGTCTACCAACATACTCCTTGATGAAAGATACGAGGCAAAGCTATCAGATTACGGTTTGG 2275
Query 2270 AAAAGTTTCTTCCGGTTTTGAACAGCTTCAATTTGAAGAAGTTCCACAATGCGGTTGGAT 2329
||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||
Sbjct 2276 AAAAGTTTCTTCCGGTTTTGAACAGCTCCGGTTTGACTAAGTTCCACAATGCGGTTGGAT 2335
Query 2330 ACATAGCTCCAGAGCTAGCTCAGAGTTTGAGAGTGAGTGATAAATGTGATGTTTATAGCT 2389
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2336 ACATAGCTCCAGAGCTAGCTCAGAGTTTGAGAGTGAGTGACAAATGTGATGTTTATAGCT 2395
Query 2390 ACGGTGTAGTTCTTCTTGAGCTTGTTACAGGTAGAAAACCGGTGGAGTCGCCATCCGAAA 2449
| ||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||
Sbjct 2396 ATGGTGTGGTTCTTCTTGAGCTTGTTACAGGTAGAAAACCAGTGGAGTCGCCGTCTGAAA 2455
Query 2450 ACGAGGTTTTGATCTTAAGGGATCATGTGAGGGATTTGTTGGAGACAGGGTCGGCTTCTG 2509
|||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 2456 ACGAGGTTGTGATCTTAAGGGATCATGTGAGGAATTTGTTGGAGACAGGTTCGGCTTCTG 2515
Query 2510 ATTGTTTTGACAGTAGATTGATTGGGTTTGAAGAGAATGAGCTGATTCAAGTGATGAAAT 2569
||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2516 ATTGTTTTGACAGAAGATTGAGAGGGTTTGAAGAGAATGAGCTGATTCAAGTGATGAAAT 2575
Query 2570 TAGGTCTGCTTTGCACGACAGAGAATCCATTGAAGAGACCGAGCATGGCAGAGGTTGTGC 2629
||||| || ||||||| |||||||||||||| |||||||||||||| |||||||||||||
Sbjct 2576 TAGGTTTGATTTGCACAACAGAGAATCCATTAAAGAGACCGAGCATTGCAGAGGTTGTGC 2635
Query 2630 AGGTTCTTGAATTGATCAGAAATGGAATGGAATCATGAGA-GAATTCGTTTAGTTTTTGC 2688
||||||||||| |||||||||||||||||||||||||| | ||| ||||||| |||||||
Sbjct 2636 AGGTTCTTGAACTGATCAGAAATGGAATGGAATCATGAAAAGAACTCGTTTA-TTTTTGC 2694
Query 2689 AGAGATATTGTGCAGTGTTTACT-TT--GT-C-T------GT--TT-T---GT-TG---- 2726
||||| |||||| |||||||||| || || | | || || | || ||
Sbjct 2695 AGAGAAATTGTGTAGTGTTTACTGTTAAGTTCATTCATTTGTGATTCTTTTGTCTGTTTT 2754
Query 2727 ----CTAAAATTGGTAAAAGTTCTATTGACCGGGTCTTCTCTAACCTTAAACCGATCCTG 2782
||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||
Sbjct 2755 GTTGCTAAAATTGGTAAAAGTTCCATTAACCGGGTCTTCTCTAACCTTAAACCGATTCTG 2814
Query 2783 GATTGGTATT 2792
||||| ||||
Sbjct 2815 GATTGATATT 2824
> AT1G12460.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr1:4247249-4250630 FORWARD LENGTH=3289
Length=3289
Score = 2012 bits (1089), Expect = 0.0
Identities = 2147/2643 (81%), Gaps = 132/2643 (5%)
Strand=Plus/Plus
Query 88 GAACGAGAGATTCTACTTCAATTCAGAGACAACATCAACGATGATCCGTACAACAGTTTA 147
|||||||| ||||| ||||| |||| || || |||| || ||||| |||||||| ||
Sbjct 530 GAACGAGACATTCTGCTTCAGTTCAAAGGCAGTATCAGTGACGATCCATACAACAGCTTG 589
Query 148 GCTTCTTGGGTCTCCAATGGTGATCTTTGTAATAGCTTCAATGGTGT-ATCTTGTAACCG 206
||||||||||| ||| ||||||| || || |||||||||||||| | | |||||||||
Sbjct 590 GCTTCTTGGGTTTCCGATGGTGACCTCTGCAATAGCTTCAATGGAATCA-CTTGTAACCC 648
Query 207 AGAAGGATTCGTCGA-AAAGATCGTTCTTTGGAACACAAGTCTCGCCGGAACCCTAACGC 265
| |||| ||||| || ||| |||||||| |||||||||||||||||||||||| || | |
Sbjct 649 ACAAGGTTTCGTGGACAAA-ATCGTTCTGTGGAACACAAGTCTCGCCGGAACCTTAGCTC 707
Query 266 CGGCATTGTCTGGT-TTAACTTCT-TTAAGGGTTTTG-ACTCTGTTTGGCAACAGTTTTA 322
||| |||||| | | || || | || | ||| || ||| ||||||||||||| ||||
Sbjct 708 CGGGATTGTCAAATCTAAAGTT-TATT-CGAGTTCTGAACT-TGTTTGGCAACAGGTTTA 764
Query 323 CAGGTAAGTTACCGTTGGATTAC-TCAAAGTTACAGACTTTATGGAAGATCAATGTTAGT 381
||||||| ||||||||||||||| || ||||| || ||||| |||| ||| |||||||||
Sbjct 765 CAGGTAATTTACCGTTGGATTACTTC-AAGTTGCAAACTTTGTGGACGATTAATGTTAGT 823
Query 382 TCCAATGCATTGTCTGGTTCGATTCCTGAATTTATCGGTGATTTGCCTAATTTAAGG-TT 440
|||||||| ||||||||| ||||||| || ||||| |||| ||| ||| |||||| ||
Sbjct 824 TCCAATGCGTTGTCTGGTCCGATTCCGGAGTTTATTAGTGAATTGTCTAGCTTAAGGTTT 883
Query 441 CTTGGATTTGTCGAAAAATGGTTTCTTTGGAGAGATTCCGAG-TTCTCTGTTTAAATTCT 499
| | || ||||| |||||||||||| |||||||||||| | |||||||||||| ||||
Sbjct 884 C-TAGACTTGTCTAAAAATGGTTTCACCGGAGAGATTCCG-GTTTCTCTGTTTAAGTTCT 941
Query 500 GCT-TCAAGACCAAGTTTGTTTCATTGTCTCATAACAATCTCTCAGGATCTATCCCGGAA 558
| | ||||||||| ||||||||| || ||||||||||| ||| ||||| ||||| |
Sbjct 942 G-TGACAAGACCAAATTTGTTTCACTGGCTCATAACAATATCTTTGGATCAATCCCTGCT 1000
Query 559 TCAATCGTAAACTGTAACAATCTCATCGGCTTCGATTTCTCTTACAATGGCAT-T--ACC 615
||||| |||||||||||||| ||| | || || ||||||||||||||| || | |
Sbjct 1001 TCAATTGTAAACTGTAACAACCTCGTAGGATTTGATTTCTCTTACAAT--AATCTGAAGG 1058
Query 616 G-GT-TTGTTGCCTCGAATCTGCGATATTCCGGTTCTTGAGTTTGTATCCGTTAGAAGA- 672
| || ||| |||| | || || |||||||| || ||||| | | | || || |||| |
Sbjct 1059 GAGTGTTGCCGCCTAGGATTTGTGATATTCCTGTGCTTGAATATATCTCAGTGAGAA-AC 1117
Query 673 AATGTGTTGTCTGGTGATGTGTTTGAGGAGATATTGAAGTG-CAAGAGATTGAGCCATGT 731
||| |||||||||||||||| | |||||||||| ||| || | |||| |||| | |||
Sbjct 1118 AATTTGTTGTCTGGTGATGTCTCTGAGGAGATACAGAAATGTC-AGAGGTTGATTCTTGT 1176
Query 732 GGATATAGGAAGCAA-TTCTTTCGATGGAGTAGGGTCTTTCGAGGTTCTT-GGATTCAAG 789
||| |||||||||| || |||| ||||| ||| | |||| | ||||||| | ||||||
Sbjct 1177 TGATTTAGGAAGCAATTTGTTTC-ATGGATTAGCGCCTTTTGCGGTTCTTACG-TTCAAG 1234
Query 790 AACATAACTTATTTCAATGTGTC-TGGAAACCGGTTTACCGGGGAGATTGGTGAGATTGT 848
|||||||||||||||||||| || ||| ||||| ||| || |||||||| ||||| ||
Sbjct 1235 AACATAACTTATTTCAATGTCTCTTGG-AACCGATTTGGTGGTGAGATTGGAGAGATAGT 1293
Query 849 TGATTGTAGTGAAAGTTTGGAGTTTTTGGATGCTTCTTCGAATGAGTTAACGGGTA--AT 906
|||||| ||||||||||||||||||||||||||||| |||||||||||||| |||| ||
Sbjct 1294 TGATTGCAGTGAAAGTTTGGAGTTTTTGGATGCTTCGTCGAATGAGTTAACCGGTAGGAT 1353
Query 907 GTACCTAGC-GGTATAACCGGATGCAAAAGTCTTAAGCTTTTGGACCTGGAATCGAATAA 965
| |||| | ||| | | || ||||||||||| ||||||||||| |||| || || ||
Sbjct 1354 -T-CCTA-CTGGTGTTATGGGTTGCAAAAGTCTCAAGCTTTTGGATTTGGAGTCTAACAA 1410
Query 966 GCTCAATGGGAGTGTACCTGCAGGTAT-GAGGAAGATGGAGAAGC-TCTCTGTGATCAGA 1023
||| ||||| ||| | || | | |||| | |||||||||||| || |||| |||||||||
Sbjct 1411 GCTGAATGGAAGTATCCCGGGAAGTATTG-GGAAGATGGAGA-GCCTCTCAGTGATCAGA 1468
Query 1024 TTAGGCGA-TAACTT-TATAGATGGGAAGATACCGCTCGAGCTCGGAAATCTTG-AGTAT 1080
||||| || ||| || |||||||||| |||||| || | |||| | ||| ||| |
Sbjct 1469 TTAGG-GAATAA-TTCTATAGATGGGGTGATACCAAGAGATATTGGAAGT-TTGGAGTTT 1525
Query 1081 CTACAGGTTTTGAATTTGCATAATCTCAATCTCATTGGTGAAATACCAGAGGATTTATCA 1140
||||||||||||||| |||||||||||||||||||||||||| | ||||||||| ||||
Sbjct 1526 CTACAGGTTTTGAATCTGCATAATCTCAATCTCATTGGTGAAGTTCCAGAGGATATATCC 1585
Query 1141 AATTGCAGACTACTTCTTGAACTAGATGTTTCTGGGAATGCTTTAGAAGGAGAGATCCCT 1200
||||||||| |||||||||||||||||||||| ||||||| |||||||||| ||||| ||
Sbjct 1586 AATTGCAGAGTACTTCTTGAACTAGATGTTTCAGGGAATGATTTAGAAGGAAAGATCTCT 1645
Query 1201 AAGAATCTATTGAACTTAACAAACTTAGAGATCCTTGATCTGCATCGGAACCGAATCAGT 1260
||||| ||||| |||||||||||| || |||| |||||||||||||| ||||| | |
Sbjct 1646 AAGAAGCTATTAAACTTAACAAACATAAAGATTCTTGATCTGCATCGAAACCGTCTGAAC 1705
Query 1261 GGAAGCATTCCGCCT-AATCTTGGGAACCTCTCGAGAA-TCCAGTTCCTCGATCTTTCAG 1318
||||| || || ||| || ||||| |||||||| | || ||||||| || |||||||||
Sbjct 1706 GGAAGTATCCCACCTGAA-CTTGGAAACCTCTCCA-AAGTCCAGTTTCTTGATCTTTCAC 1763
Query 1319 AGAATTTGCTTTCTGGTCCTATCCCGTCTTCTCTCAGGAATTTGAATAGACTGACACATT 1378
|||||| |||||| || || ||||||||||| ||| ||| |||||||| || || ||||
Sbjct 1764 AGAATTCGCTTTCAGGGCCAATCCCGTCTTCCCTCGGGAGTTTGAATACTCTAACGCATT 1823
Query 1379 TCAATGTTTCTTACAACAACCTCTCCGGCATTAT---TCCA-----AA-GATTCAAGCTT 1429
||||||| || || ||||| ||||| || |||| ||| || ||| |||||||
Sbjct 1824 TCAATGTCTCCTATAACAATCTCTCTGGTGTTATCCCTCCTGTTCCAATGATACAAGCTT 1883
Query 1430 CGGGAGCTTCTTCGTTTTCCAACAACCCTTTCCTCTGCGGTGATCCTCTTGAAACACCGT 1489
||| ||||| | ||||| |||||||||||||| |||||||||||||||| ||| || |
Sbjct 1884 TTGGATCTTCTGCATTTTCGAACAACCCTTTCCTTTGCGGTGATCCTCTTGTAACTCCCT 1943
Query 1490 GCAATGCTC-TCAGAACTGGATCAAGATCAAGAAAAACCAAAGCTCTAAGCACCTCTGTT 1548
||||| | | | || ||| | ||| ||| ||||| | | |||||||||| || |||
Sbjct 1944 GCAATTCACGTG-GAGCTGCAGCAAAATCCAGAAATTCTGATGCTCTAAGCATTTCGGTT 2002
Query 1549 ATCATTGTTATCATCGCTGCTGCTG-CGATCTTGGCTGGTATCTGTC-TAGTGCTTGTTT 1606
||||| ||||| || || ||||||| | ||| | |||| |||| | | ||||||| ||
Sbjct 2003 ATCATCGTTATTATTGCGGCTGCTGTC-ATCCTCTTTGGTGTCTG-CATTGTGCTTGCTT 2060
Query 1607 TGAACCTTAGGGCTCGTAAAAG-ACGGAAAAAGCCTGAAGAAGAAATAGTCACTTTTGAT 1665
||||||| || ||||||||||| | | |||| | ||||||| | || | || ||||
Sbjct 2061 TGAACCTAAGAGCTCGTAAAAGGA-G-AAAA-GA-TGAAGAA-A--TACTTACAGTTGA- 2112
Query 1666 AACACAACACCCACACAGGCGTCAACGGAAT--CTGGTAATGGTGGTG-TAACATTCGGG 1722
||| || | || || |||||| || | | || || |||| || ||| || ||
Sbjct 2113 AAC-CA-CTCC-ACT--GGCGTCTTCG-ATTGACTC-TAGCGGTG-TGATAA--TT-GG- 2160
Query 1723 AAA-CTTGTTCTATTCAGCAAGAGTTTGCCTTCAAAGTATGAAGATTGGGAGGCGGGTAC 1781
||| |||||||| |||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct 2161 AAAGCTTGTTCTTTTCAGCAAGAATTTGCCTTCAAAGTATGAAGATTGGGAGGCAGGTAC 2220
Query 1782 AAAAGCATTACTCGACAAGGATAACATTATCGGTATTGGATC-AGTTGGAGTG-GTTTAT 1839
|||||| || ||||||||||| || || ||||| || ||||| | ||||| | || |||
Sbjct 2221 AAAAGCTTTGCTCGACAAGGAAAATATAATCGGCATGGGATCGA-TTGGA-TCAGTCTAT 2278
Query 1840 AGAGCATCTTTCGAAGGCGGGGTTTCCATTGCAGTGAAAAAGCTCGAGACTCT-AGGAAG 1898
||||||||||||||||| || ||||||||||||||||| ||||| ||||| || ||||||
Sbjct 2279 AGAGCATCTTTCGAAGGAGGAGTTTCCATTGCAGTGAAGAAGCTTGAGAC-CTTAGGAAG 2337
Query 1899 AATCAGAAGCCAAGAAGAGTTTGAGCAAGAAATCGGAAGGCTTGGAAGTTT--AAGTCAC 1956
|||||||| |||||||||||||||||||||||| ||| |||||||| |||| || ||
Sbjct 2338 AATCAGAAACCAAGAAGAGTTTGAGCAAGAAATTGGACGGCTTGGAGGTTTGCAA--CAT 2395
Query 1957 CCGAATCT-TGCTTCTTTTCAAGGTTACTACTTTTCCTCGACAATGCAGTTAATTCTTTC 2015
|||||||| | ||||||| |||||||||||||||||||| ||||||||||| ||||| ||
Sbjct 2396 CCGAATCTGT-CTTCTTTCCAAGGTTACTACTTTTCCTCAACAATGCAGTTGATTCTCTC 2454
Query 2016 TGAATTTGTCACAAACGGAAGCCTTTATGATAATCTACACCCGAGAATCTCTCATAG-AA 2074
||| |||||| | || || ||||| || ||||||||||||| ||||| | || | ||
Sbjct 2455 TGAGTTTGTCCCTAATGGTAGCCTCTACGATAATCTACACCTAAGAATTT-TCCCGGGAA 2513
Query 2075 CCAGCAGTAGCAGCAGCAGCCATGGAAACACCGAGTTAGA-TTGGCATAGAAGATTCCAA 2133
||||| | || ||| |||| || || || || || |||||| |||||||| ||
Sbjct 2514 CCAGC--T--CA--AGCT---ATGGGAATACTGATTT-GAATTGGCACAGAAGATTTCAG 2563
Query 2134 ATAGCAGTAGGAACTGCAAAGGCGCTTTCTTTTCTTCACAACGATTGTAAACCCGCGATT 2193
|| || ||||||||||||| ||||| ||||| |||||||| || |||||||| ||||||
Sbjct 2564 ATTGCTTTAGGAACTGCAAAAGCGCTCTCTTTCCTTCACAATGACTGTAAACCGGCGATT 2623
Query 2194 CTTCATCTCAATATAAAGTCTACCAACATTCTCCTTGATGAA-GGATACGAGGCAAAGCT 2252
|||||||||||| | ||||| ||||||||||| || || ||| || ||||||||||||||
Sbjct 2624 CTTCATCTCAATGTTAAGTCCACCAACATTCTTCTAGACGAAAGG-TACGAGGCAAAGCT 2682
Query 2253 ATCAGATTACGGTTTGGAAAAGTTTCTTCCGGTTTTGAACAGCTTCAATTTGA--A-GAA 2309
||| ||||| || || |||||||||||||||||| || ||||||| ||||| | |||
Sbjct 2683 ATCGGATTATGGGTTAGAAAAGTTTCTTCCGGTTATGGACAGCTTTGGTTTGACTAAGAA 2742
Query 2310 GTTCCACAATGCGGTTGGATACATAGCTCCAGAGCTAGCTCAG-AG--TTTGAGAGTGAG 2366
||||||||| |||||||| ||||| ||||||||| |||||||| || |||||||| |||
Sbjct 2743 GTTCCACAACGCGGTTGGGTACATTGCTCCAGAGTTAGCTCAGCAGAGTTTGAGAGCGAG 2802
Query 2367 TGATAAATGTGATGTTTATAGCTACGGTGTAGTTCTTCTTGAGCTTGTTACAGGTAGAAA 2426
||| ||||| ||||| ||||| |||||||| |||||||||||||| ||||||||||||||
Sbjct 2803 TGAGAAATGCGATGTGTATAGTTACGGTGTGGTTCTTCTTGAGCTGGTTACAGGTAGAAA 2862
Query 2427 ACCGGTGGAGTCGCCATCCGAAAACGAGGTTTTGATCTTAAGGGA-TCATGTGAGGGATT 2485
|||||||||||| ||||| |||||| | || |||||||| || || | ||||||||||||
Sbjct 2863 ACCGGTGGAGTCTCCATCGGAAAACCAAGTCTTGATCTTGAGAGACT-ATGTGAGGGATT 2921
Query 2486 TGTTGGAGACAGGGTCGGCTTCTGATTGTTTTGACAGTAGATTGATTGGGTTTGAAGAGA 2545
|||||||||| || || |||||||||||||||||||| || |||| | |||||||||||
Sbjct 2922 TGTTGGAGACTGGTTCAGCTTCTGATTGTTTTGACAGAAGGTTGAGAGAGTTTGAAGAGA 2981
Query 2546 ATGAGCTGATTCAAGTGATGAAATTAGGTCTGCTTTGCACGACAGAGAATCCATTGAAGA 2605
|||||||||||||||| ||||| ||||| || ||||| ||| | ||||||||| ||||||
Sbjct 2982 ATGAGCTGATTCAAGTCATGAAGTTAGGACTCCTTTGTACGTCCGAGAATCCACTGAAGA 3041
Query 2606 GACCGAGCATGGCAGAGGTTGTGCAGGTTCTTGAATTGATCAGAAATGGAAT-GGAATCA 2664
||||||||||||| |||||||||||||||||||||| |||||||||||| | ||| |||
Sbjct 3042 GACCGAGCATGGCTGAGGTTGTGCAGGTTCTTGAATCAATCAGAAATGGATTTGGA-TCA 3100
Query 2665 TGA 2667
|||
Sbjct 3101 TGA 3103
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 138711597395
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5