BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475065
Length=2661
Score E
Sequences producing significant alignments: (Bits) Value
AT1G62870.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 3794 0.0
AT1G12380.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 952 0.0
> AT1G62870.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT1G12380.1);
Has 351 Blast hits to 343 proteins in 42 species: Archae -
2; Bacteria - 0; Metazoa - 27; Fungi - 5; Plants - 299; Viruses
- 0; Other Eukaryotes - 18 (source: NCBI BLink). | chr1:23284012-23286760
REVERSE LENGTH=2749
Length=2749
Score = 3794 bits (2054), Expect = 0.0
Identities = 2473/2662 (93%), Gaps = 81/2662 (3%)
Strand=Plus/Plus
Query 58 ATTTCTTTTTCTGATCTCTGTCATGAGAAATCGCCGGAGTTATCTCCGACCACCGGCGGA 117
|||||| |||||| ||||||| ||||| || |||||||||||||||||||| |||||| |
Sbjct 111 ATTTCTATTTCTGTTCTCTGTTATGAGGAACCGCCGGAGTTATCTCCGACCGCCGGCGAA 170
Query 118 ATTTTCTCTTCAATTTCA-C----T--AC---TCTCAGCTTAATTCCGTTCAGGGTT-TT 166
|||||||||||||||||| | | || ||||||||||||| ||||||||||| ||
Sbjct 171 ATTTTCTCTTCAATTTCATCAAAATCCACTAGTCTCAGCTTAATTTCGTTCAGGGTTGTT 230
Query 167 GTTTTAAG-TTTTCGACTTTACAATGGCGACGACGACAAACG---CAACAACGGCGACAC 222
| |||||| |||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct 231 G-TTTAAGTTTTTTGACTTTACAATGGCGACGACGACAAACGCAACAACAACGGCGACAC 289
Query 223 AACAGCAAACGCAAACGCAATCACCATCGCAACAACCGCCATTACCGTCGGCGGAAGAAT 282
|||||||||||||||||||||||||| || ||| || |||||||||||||||||
Sbjct 290 AACAGCAAACGCAAACGCAATCACCAACG---CAA----CA--ACCGTCGGCGGAAGAAT 340
Query 283 TAGCAACAAAGGCGTTACAAAAGCGTTACGAAGGATTAATGATGGTAAGAACAAAAGCAG 342
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 341 TAGCGACAAAGGCGTTACAAAAGCGTTACGAAGGATTAATGATGGTAAGAACAAAAGCAG 400
Query 343 TAAAAGGCAAAGGCGCGTGGTATTGGAGTCATCTTGAACCAATCTTACTTCACAACACCG 402
| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 401 TTAAAGGCAAAGGCGCGTGGTATTGGAGTCACCTTGAACCAATCTTACTACACAACACCG 460
Query 403 ACACTGGTTTCCCTAAAGCCGTTAAACTCCGATGTTCTTTATGCGACGCCGTTTTCTCAG 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 461 ACACTGGTTTCCCTAAAGCCGTTAAACTCCGATGTTCTTTATGCGACGCCGTTTTCTCAG 520
Query 463 CTTCGAATCCTTCACGAACTGCTTCTGAGCATCTTAAACGTGGAACTTGTCCAAATTTCA 522
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 521 CTTCTAATCCTTCCCGAACTGCTTCTGAGCATCTTAAACGTGGAACTTGTCCAAATTTCA 580
Query 523 ACTCTTTACCTAAACCCATCTCCACAATCTCTCCTCCTCCACCACCTCCGCCGCCGCAAA 582
||||||||||||||||||||||||||||||||||| | | ||||| || | |
Sbjct 581 ACTCTTTACCTAAACCCATCTCCACAATCTCTCCT--T----CTCCTCCTCC-TC-C--T 630
Query 583 CGACGTCTTCTTCTCACCGGAAACGTAATTCCTCCGCTGTGGAAGCTCTG-A--atcatc 639
| |||||||||||||||||||||||||||||||||| |||||||||||| | ||||||
Sbjct 631 C--CGTCTTCTTCTCACCGGAAACGTAATTCCTCCGCCGTGGAAGCTCTGAATCATCATC 688
Query 640 --c-tcatcctcatcatcatcatcaAGGGTCTTATAATGTGACGCCTCTCAGTGTTGTTG 696
| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 689 ATCATCATCCTCATCATCATCATCAAGGGTCTTATAATGTGACGCCTCTTAGTGTCGTTG 748
Query 697 ATCCGTCGAGATTCTGTGGGCAGTTTCCGGTTACGCAGCAGCCGCATTTGATGCTTTCCG 756
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 749 ATCCCTCGAGATTCTGTGGGCAGTTTCCGGTTACACAGCAGCCGCATTTGATGCTTTCCG 808
Query 757 GTGGAAAAGACGATTTGGGTCCATTAGCTATGCTTGAAGATAGTGTGAAGAAGCTTAAGA 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 809 GTGGAAAAGACGATTTGGGTCCATTAGCTATGCTTGAAGATAGTGTGAAGAAGCTCAAGA 868
Query 817 GTCCTAAAACTTCGCAGACGCAGAATCTAAGTAAAGCTCAGATAGATTCTGCGTTAGATT 876
||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 869 GTCCTAAAACTTCTCAGACGCGGAATCTAACTAAAGCTCAGATAGATTCTGCGTTAGATT 928
Query 877 CTCTCTCTGATTGGGTTTTTGAATCTTGTGGCTCTGTTTCTTTATCTGGTCTTGAGCATC 936
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 929 CTCTCTCTGATTGGGTTTTTGAATCTTGTGGCTCTGTTTCTTTATCTGGTCTCGAGCATC 988
Query 937 CAAAGTTGAGAGCTTTTTTGACGCAAGTTGGGTTACCGATTATCTCAAGGAGAGATTTTG 996
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 989 CAAAGTTGAGAGCTTTTTTGACGCAAGTTGGTTTACCGATCATCTCAAGGAGAGATTTTG 1048
Query 997 TTACCGGAAGATTGGATTTGAAGTATGAGGATTCGAGAGCAGAGGCTGAATCGAGAATCC 1056
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1049 TCACCGGAAGATTGGATTTGAAGTATGAAGATTCGAGAGCAGAGGCTGAATCGAGAATCC 1108
Query 1057 ATGACGCAATGTTCTTTCAAATCGCTTCTGATGGATGGAAATTCGAAAACTCCGGCGAGA 1116
| ||||||||||||||||| || ||||||||||||||||||||||| | |||||||||||
Sbjct 1109 ACGACGCAATGTTCTTTCAGATTGCTTCTGATGGATGGAAATTCGACAGCTCCGGCGAGA 1168
Query 1117 ATTTGGTGAATTTGATTGTGAATTTACCTAATGGGACGAGTTTGTATAGACGAGCTGTGT 1176
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1169 ATTTGGTGAATTTGATTGTGAATTTGCCTAATGGGACGAGTTTGTATAGACGAGCTGTGT 1228
Query 1177 TTGTGAACGGAGCTGTGCCGTCTAATTACGCAGAGGAGGTTTTGTGGGAGACGGTGAGGG 1236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1229 TTGTGAACGGAGCTGTGCCGTCTAATTACGCAGAGGAGGTTTTGTGGGAGACGGTGAGGG 1288
Query 1237 GTATTTGTGGTAATTCACCTCAGCGATGTGTTGGAATTGTTTCAGATAGGTTTATGAGTA 1296
||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||
Sbjct 1289 GTATTTGTGGTAATTCACCTCAGAGGTGTGTTGGGATTGTTTCAGATAGGTTTATGAGTA 1348
Query 1297 AAGCATTGAGGAATCTTGAAAGCCAGCATCAATGGATGGTGAATCTCTCTTGTCAGTTTC 1356
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1349 AGGCATTGAGGAATCTTGAGAGCCAGCATCAATGGATGGTGAATCTCTCTTGTCAGTTTC 1408
Query 1357 AAGGTTTCAATAGTTTGATTCAAGATTTTGTGAAAGAGCTTCCTTTGTTTAAATCCGTCT 1416
|||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct 1409 AAGGTTTCAACAGTTTGATTCGAGATTTTGTAAAAGAGCTTCCTTTGTTTAAATCCGTCT 1468
Query 1417 CTCAAAGCTGCTCGAGGCTCGTTAATTTCGTCAACAGCACGCCGCAGTTCCGAAACGCGG 1476
||||||||||||||||||||||||||||||| ||||||||| | ||| ||||||||||||
Sbjct 1469 CTCAAAGCTGCTCGAGGCTCGTTAATTTCGTGAACAGCACGGCACAGATCCGAAACGCGG 1528
Query 1477 TTTGTAAGTATCAGTTGCAAGAGCAAGGAGAGACTAGAATGCTGCATTTGCCTTTGGATA 1536
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1529 TTTGTAAGTATCAGTTGCAAGAGCAAGGAGAGACTAGGATGCTGCATTTGCCTTTGGATA 1588
Query 1537 GTTCCTTGTTTGAGCCATTGTATAATCTTCTTGAGGATGTACTTAGTTCCGCTAGAGCGA 1596
|||| ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||
Sbjct 1589 GTTCTTTGTTTGAGCCATTGTATAATCTCCTTGAGGATGTGCTTAGTTTCGCTAGAGCGA 1648
Query 1597 TTCAGCTTGTGATGCATGATGATGCT-TGTAAGGCTGTGCTTATGGAGGATCATATGGCT 1655
||||||| |||||||||||||||| | ||||||||||| || ||||||||||||||||||
Sbjct 1649 TTCAGCTGGTGATGCATGATGATG-TGTGTAAGGCTGTTCTAATGGAGGATCATATGGCT 1707
Query 1656 AGAGAGGTTGGTGAAATGGTTGGGGATGTCGGGTTTTGGAACGAGGTAGAGGCGGTTTAT 1715
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1708 AGAGAGGTTGGTGAAATGGTTGGAGATGTCGGGTTTTGGAACGAGGTAGAGGCGGTTTAT 1767
Query 1716 TCGTTGTTGAAGCTCGTTAGAGAAATGGCTCGGCGAATAGAAGAAGAGAGGCCTTTGGTA 1775
| |||||||||||| |||| ||||||||||||| ||||||| ||||||||||||||||||
Sbjct 1768 TTGTTGTTGAAGCTTGTTAAAGAAATGGCTCGGAGAATAGAGGAAGAGAGGCCTTTGGTA 1827
Query 1776 GGGCAATGTTTGCCGCTTTGGGACGAGCTGAGATCGAAGATAAAAGATTGGTATGCAAAG 1835
||||||||||| ||||| ||||| ||||| || || ||||||||||||||||||||||||
Sbjct 1828 GGGCAATGTTTACCGCTATGGGATGAGCTAAGGTCCAAGATAAAAGATTGGTATGCAAAG 1887
Query 1836 TTTAATGTAGTTGAAGAGAGGCAAGTTGAGAAGATCGTTGAGAGAAGATTCAAGAAGAGT 1895
|| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1888 TTCAATGTTGTTGAAGAGAGGCAAGTAGAGAAGATCGTTGAGAGAAGATTCAAGAAGAGT 1947
Query 1896 TATCACCCGGCTTGGGCTGCAGCGTTTATACTTGATCCTCTTTACTTGATAAGAGACAGC 1955
|||||||| ||||||||||| ||||||||||||||||| ||||||||||||| ||||||
Sbjct 1948 TATCACCCAGCTTGGGCTGCGGCGTTTATACTTGATCCGCTTTACTTGATAAAAGACAGT 2007
Query 1956 AGCGGAAAATATCTTCCTCCATTCAAGTGCTTGTCGCCAGAACAAGAGAAAGATGTTGAT 2015
|||||||||||||||||||||||||| |||||||| || || ||||||||||||||||||
Sbjct 2008 AGCGGAAAATATCTTCCTCCATTCAAATGCTTGTCCCCGGAGCAAGAGAAAGATGTTGAT 2067
Query 2016 AAGTTGATAACAAGGCTAGTGTCTAGAGACGAGGCACATATCGCGATGATGGAACTGATG 2075
||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2068 AAGTTAATAACAAGGCTTGTGTCTAGAGACGAGGCACATATCGCGATGATGGAGCTGATG 2127
Query 2076 AAATGGAGAACTGAAGGGCTTGATCCGGTTTATGCAAGGGCGGTTCAAATGAAGGAGAGA 2135
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2128 AAATGGAGAACAGAAGGGCTTGATCCGGTTTACGCAAGGGCGGTTCAAATGAAGGAGAGA 2187
Query 2136 GACCCTATTTCAGGGAAAATGAGGATAGCTAATCCACAAAGCAGTAGACTTGTTTGGGAA 2195
|| ||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2188 GATCCTGTTTCGGGGAAAATGAGGATAGCTAATCCACAAAGTAGTAGACTTGTTTGGGAA 2247
Query 2196 ACTTATCTTAGTGAGTTCAGGTCATTGGGGAGAGTTGCAGTTAGGCTTATTTTTCTCCAT 2255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2248 ACTTATCTTAGTGAGTTCAGGTCATTGGGGAGAGTTGCAGTTAGGCTTATTTTTCTCCAT 2307
Query 2256 GCAACTTCTTGTGGGTTCAAATGCAATTCCTCTGTTTTGAGATGGGTAAATTCGAATGGA 2315
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2308 GCAACTTCTTGTGGTTTCAAATGCAATTCCTCTGTTTTGAGATGGGTAAATTCGAATGGA 2367
Query 2316 AGATCACGTGCAGCCGTGGATCGAGCTCAAAAGCTGATCTTTATATCCGCCAATTCAAAA 2375
|||||||| |||||||||||||||||||||||| |||||||||||||||| || || |||
Sbjct 2368 AGATCACGCGCAGCCGTGGATCGAGCTCAAAAGTTGATCTTTATATCCGCTAACTCGAAA 2427
Query 2376 TTCGAAAGGAGAGACTTCTCAAACGAGGAAGAGAGAGACGCAGAGCTGCTCGCTATGGCT 2435
|||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||
Sbjct 2428 TTCGAAAGGAGAGACTTCTCCAACGAGGAAGAGAGAGATGCGGAGCTGCTCGCTATGGCG 2487
Query 2436 AATGGCGAAGATGATGTGCTAAACGATGTTCTCATCGATACATCCTCGGTGTGAC----- 2490
||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2488 AATGGCGAAGATGATGTGCTAAACGATGTTCTCATCGATACATCCTCAGTGTGACTTGTT 2547
Query 2491 --------CCA--TTTAGTTTT-CACTAGAAGTTGGCCATTTTGTAGGATTGCTTGAATT 2539
||| ||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 2548 AATTTTTACCAAATTTAGTTTTTCACTAGAACTTGGCCATTTTGTAGGATTGCTTGAATT 2607
Query 2540 CAtttttttt------A-CT---------AC--CC-TTAATTTAATTTGTACTTGGCTCC 2580
|||||||||| | || || || |||||| |||||||||||||||||
Sbjct 2608 CATTTTTTTTGTTGTTAACTTTTTTTTTTACTACCCTTAATTCAATTTGTACTTGGCTCC 2667
Query 2581 TTTAGGAGGTGAGAA-GAGAGCCATATCATTGTATTTCTTTTAGTCTATTTCGATCATAA 2639
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2668 TTTAGGAGGTGAGAAAGAGAGCCATATCATTGTATTTCTTTTAGTCTATTTTGATCATAA 2727
Query 2640 TTTTAGGCGATTTTTCCGTGTC 2661
|||||||| |||||||||||||
Sbjct 2728 TTTTAGGCAATTTTTCCGTGTC 2749
> AT1G12380.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT1G62870.1);
Has 173 Blast hits to 170 proteins in 34 species: Archae -
0; Bacteria - 4; Metazoa - 25; Fungi - 8; Plants - 123; Viruses
- 7; Other Eukaryotes - 6 (source: NCBI BLink). | chr1:4214262-4217132
REVERSE LENGTH=2871
Length=2871
Score = 952 bits (515), Expect = 0.0
Identities = 809/951 (85%), Gaps = 19/951 (2%)
Strand=Plus/Plus
Query 1548 GAGCCATTGTATAATCTTCTTGAGGATGTACTT-AGTTCCGCTAGAGCGATTCAGCTT-G 1605
||||| |||| |||||||||||| ||||| || |||||||||||||| |||||| || |
Sbjct 1696 GAGCCGTTGTTTAATCTTCTTGAAGATGT-GTTGAGTTCCGCTAGAGCAATTCAG-TTGG 1753
Query 1606 TGA-TGCATGATGATGCTTGTAAGGCTGTGCTT-ATGGAGGATCATATGGCTAGAGAGGT 1663
| | | |||||||||||||| |||| ||| || |||||||||||||||||||| |||||
Sbjct 1754 T-AGTACATGATGATGCTTGCAAGGTTGT-TTTAATGGAGGATCATATGGCTAGGGAGGT 1811
Query 1664 TGGTGAAATGGTTGGGGATGTCGGGTTTTGGAACGAGGTAGAGGCGGTTTATTCGTTGTT 1723
| | || |||||||| || | |||||||||||||||||||| |||||| || | ||| |
Sbjct 1812 TAGAGAGATGGTTGGTGACGAAGGGTTTTGGAACGAGGTAGAAGCGGTTCATGCTTTGAT 1871
Query 1724 GAAGCTCGTTAGAGAAATGGCTCGGCGAATAGAAGAAGAGAGGCCT--TTGGTAGGGCAA 1781
||||| |||| ||| ||||||||| ||||||| ||||||| | || || |||||||||
Sbjct 1872 CAAGCTTGTTAAAGAGATGGCTCGGAGAATAGAGGAAGAGAAG-CTGCTT-GTAGGGCAA 1929
Query 1782 TGTTTGCCGCTTTGGGACGAGCTGAGATCGAAGATAAAAGATTGGTATGCAAAGTTTAAT 1841
|| || || || ||||| ||||| ||| | ||| | ||||||||| || | |||||||||
Sbjct 1930 TGCTTACCTCTATGGGATGAGCTAAGAGCTAAGGTTAAAGATTGGGATTCTAAGTTTAAT 1989
Query 1842 GTAGTTGAAGAGAGGCAAGTTGAG-AAGATCGTTGAGAGAAGATTCAAGAAGAGTTATCA 1900
|||| |||| || || || ||| ||| |||||||||||||||||||||||||||||||
Sbjct 1990 GTAGGGGAAG-GA--CATGTGGAGAAAG-TCGTTGAGAGAAGATTCAAGAAGAGTTATCA 2045
Query 1901 CCCGGCTTGGGCTGCAGCGTTTATACTTGATCCTCTTTACTTGATAAGAGACAGCAGCGG 1960
|||||||||||||| || ||||||||||| |||||||||||||||||||| || |||||
Sbjct 2046 TCCGGCTTGGGCTGCGGCTTTTATACTTGACCCTCTTTACTTGATAAGAGATAGTAGCGG 2105
Query 1961 AAAATATCTTCCTCCATTCAAGTGCTTGTCGCCAGAACAAGAGAAAGATGTTGATAAGTT 2020
||| ||||||||||| ||||| || ||||||||||| |||||||||||||| ||||||||
Sbjct 2106 AAAGTATCTTCCTCCGTTCAAATGTTTGTCGCCAGAGCAAGAGAAAGATGTAGATAAGTT 2165
Query 2021 GATAACAAGGCTAGTGTCTAGAGACGAGGCACATATCGCGATGATGGAACTGATGAAATG 2080
|||||||||||| ||||||||||| |||||||| || ||| |||||||||| ||||||||
Sbjct 2166 GATAACAAGGCTTGTGTCTAGAGATGAGGCACACATTGCGTTGATGGAACTAATGAAATG 2225
Query 2081 GAGAACTGAAGGGCTTGATCCGGTTTATGCAAGGGCGGTTCAAATGAAGGAGAGAGACCC 2140
|||||| |||||||||||||| | |||||||||||||| |||||||| ||| | || ||
Sbjct 2226 GAGAACCGAAGGGCTTGATCCTATGTATGCAAGGGCGGTCCAAATGAAAGAGCGTGATCC 2285
Query 2141 TATTTCAGGGAAA-ATGAGGATAGCTAATCCACAAAGCAGTAGACTTGTTTGGGAAACTT 2199
|||| || ||| ||||||||||| ||||| ||||||||||||||||||||||| || |
Sbjct 2286 GGTTTCCGG-AAAGATGAGGATAGCGAATCCTCAAAGCAGTAGACTTGTTTGGGAGACGT 2344
Query 2200 ATCTTAGTGAGTTCAGGTCATTGGGGAGAGTTGCAGTTAGGCTTATTTTTCTCCATGCAA 2259
||||||| |||||||||||| | || | ||||||||| ||||| ||||| ||||| || |
Sbjct 2345 ATCTTAGCGAGTTCAGGTCACTAGGAAAAGTTGCAGTAAGGCTCATTTTCCTCCACGCTA 2404
Query 2260 CTTCTTGTGGGTTCAAATGCAATTCCTCTGTTTTGAGATGGGTAAATTCGAATGGAAGAT 2319
| || | |||||||||||||| |||||| |||||| ||||||||| ||||| || | |
Sbjct 2405 CGACTGGAGGGTTCAAATGCAACTCCTCTCTTTTGAAATGGGTAAACTCGAACGGGCGGT 2464
Query 2320 CACGTGCAGCCGTGGATCGAGCTCAAAAGCTGATCTTTATATCCGCCAATTCAAAATTCG 2379
||| ||||||||| ||||||||||||||||||||||| |||||||| || || |||||||
Sbjct 2465 CACATGCAGCCGTTGATCGAGCTCAAAAGCTGATCTTCATATCCGCTAACTCGAAATTCG 2524
Query 2380 AAAGGAGAGACTTCTCAAACGAGGAAGAGAGAGACGCAGAGCTGCTCGCTATGGCTAATG 2439
|||||||||| |||||||||||||| || || || |||||||| ||||||||||||||||
Sbjct 2525 AAAGGAGAGATTTCTCAAACGAGGAGGATAGGGATGCAGAGCTTCTCGCTATGGCTAATG 2584
Query 2440 GCGAAGATGATGTGCTAAACGATGTTCTCATCGATACATCCTCGGTGTGAC 2490
| || || || |||||||||||||||| ||||||| ||||| |||||||
Sbjct 2585 GTGACGACCATATGCTAAACGATGTTCTTGTCGATACGTCCTCAGTGTGAC 2635
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 132139727862
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5