BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475066
Length=1170
Score E
Sequences producing significant alignments: (Bits) Value
AT1G62860.1 | Symbols: | pseudogene of pentatricopeptide (PPR)... 1101 0.0
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like s... 732 0.0
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contai... 671 0.0
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like s... 564 7e-160
> AT1G62860.1 | Symbols: | pseudogene of pentatricopeptide (PPR)
repeat-containing protein | chr1:23274676-23277017 REVERSE
LENGTH=2342
Length=2342
Score = 1101 bits (596), Expect = 0.0
Identities = 770/854 (90%), Gaps = 11/854 (1%)
Strand=Plus/Plus
Query 1 ATGGTTGAAAAGGGATGT-CAACACGATGTCGTGGCCTTCAACACACTGATGAATGGTCT 59
|||||||||| ||||||| | || ||||||| | || | |||||||||||| |||||
Sbjct 541 ATGGTTGAAACGGGATGTCCTGCA-AATGTCGTAACGTTTACCACACTGATGAACGGTCT 599
Query 60 TTGCCGCGAGGGTCGAGTTCTCGAAGCAG-TAGCTCTTGTTGATCGGATGGTTGAA-AAT 117
|||||||||||||||||||||| |||| | |||||||||||||||||||||| ||| ||
Sbjct 600 TTGCCGCGAGGGTCGAGTTCTCCAAGC-GCTAGCTCTTGTTGATCGGATGGTAGAAGAA- 657
Query 118 GGTCATCAACCTAACGAGGTGACGTATGGAACAATTGTCAATGGAATGTGTAAGATGGGT 177
|||||||||||| ||| ||| || || ||||||||||||||||||||||||||| |||||
Sbjct 658 GGTCATCAACCTGACGCGGTTACTTACGGAACAATTGTCAATGGAATGTGTAAGTTGGGT 717
Query 178 GACACTGACTCTGCCTTGAACCTGCTTAGGAAGATGGATGAAAGCCACATCAAAGCCGAT 237
||||||| ||| || ||||| ||||||||||||||||||||||||| ||||||||| ||
Sbjct 718 GACACTGTCTCGGCTTTGAATATGCTTAGGAAGATGGATGAAAGCCAAATCAAAGCCAAT 777
Query 238 GTTGTAATCTATACTGCCATCATTGATCGCCTTTGCAAAGACGGGCACCACAGCAAGGCT 297
|||||||||||| |||||||| |||||||||||||||| |||||| |||||| |||||||
Sbjct 778 GTTGTAATCTATTCTGCCATCGTTGATCGCCTTTGCAAGGACGGGAACCACATCAAGGCT 837
Query 298 CAAAATCTTTTCACTGAAATGCATGACAAAGGAATTTTTCCCAATGTTCTCACCTACAAC 357
|||||| ||||||||||||||||||| ||||| |||||||||||||||||||| |||||
Sbjct 838 CAAAATATTTTCACTGAAATGCATGAGAAAGGTATTTTTCCCAATGTTCTCACTTACAAT 897
Query 358 TGTATGATAGACGGTTGTTGTAGTTATGGTAAATGGACTGATGCGGAGCAACTGCTACGT 417
|||||||||||||||| |||||| ||||||||||||| ||||||||||||| |||| |||
Sbjct 898 TGTATGATAGACGGTTATTGTAGCTATGGTAAATGGAGTGATGCGGAGCAATTGCTGCGT 957
Query 418 GATATGATCGAGAGCAATGTCGACCCTGATGTTGTAACTTTCAATGCATTGATCAATGCA 477
||||||||||| || ||| |||||||||||||||| ||||||| |||||||||||||||
Sbjct 958 GATATGATCGAAAGGAATATCGACCCTGATGTTGTTACTTTCAGCGCATTGATCAATGCA 1017
Query 478 TTTGTCAAAGAAGGAAAGGTCTTTGAGGCTGAAGAATTATACCGTGAGATGCTTGGAAGG 537
|||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||
Sbjct 1018 TTTGTCAAAGAAGGAAAGGTCTCTGGGGCTGAAGAATTATACCGTGAGATGCTTCGAAGG 1077
Query 538 AATATATTTCCTGA-TACAATCACATATAATTCATTGATCGATGGATTTTGCAAGCATAG 596
|||||||||||| | |||||||| |||| |||| |||||||||||||||||||||||||
Sbjct 1078 AATATATTTCCT-ACCACAATCACGTATAGTTCAATGATCGATGGATTTTGCAAGCATAG 1136
Query 597 TCGTCTAGATGATGCGAAGCACATGTTTGATTTGATGGTTAGCAAGGGCTGCTCTCCGAA 656
|||||||| || || |||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1137 CCGTCTAGAAGACGCAAAGCACATGTTTGATTTGATGGTTAGCAAGGGCTGCTCTCCGGA 1196
Query 657 TGTAATCACTATTAA-TACTCTCATAGGTGGATGCTGTAGGGCTAAGAGGGTAGATGATG 715
| |||| ||| |||| ||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct 1197 TATAATTACT-TTAAATACTCTCATAGATGGATGCTGTAGGGCGAAGAGGGTAGATGATG 1255
Query 716 GAATTAAACTTCTCCATGAGATGTTAAGAAGAGGATTAGTTCCTGATTCAGTTTCTTACA 775
|||| || |||||||||||||||| ||||||||||||||||||||| | ||||||||||
Sbjct 1256 GAATGAAGCTTCTCCATGAGATGTCGAGAAGAGGATTAGTTCCTGATACCGTTTCTTACA 1315
Query 776 ACACTCTTATTCACGGGTTCTGTCAAGCGGGGGATCTTAATGCTGCTCAAGACCTTTTCC 835
|| ||||||||||||||||||||||| |||| || |||||| |||||||||||||||||
Sbjct 1316 GCA-TCTTATTCACGGGTTCTGTCAAGTGGGGAATGTTAATGTTGCTCAAGACCTTTTCC 1374
Query 836 AGGAGATGATTTCT 849
||||||||||||||
Sbjct 1375 AGGAGATGATTTCT 1388
Score = 224 bits (121), Expect = 1e-57
Identities = 139/147 (95%), Gaps = 3/147 (2%)
Strand=Plus/Plus
Query 853 GTAAGATGGATCTTGATACTGCTACTTATAACATCATCATCATCAATGGAATGTGCAAGG 912
||||||||||||||||||||||||||| | | | ||||||||||||||||||||||||||
Sbjct 1495 GTAAGATGGATCTTGATACTGCTACTTGT-A-A-CATCATCATCAATGGAATGTGCAAGG 1551
Query 913 GTAATAAGGTGGACGAAGCATGGGATTTGTTCAATAGTCTCCCCCTCAATGGTGTGGAAA 972
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1552 GTAATAAGGTGGACGAAGCATGGGATTTGTTCAATAGTCTCCCCGTCAATGGTGTGGAAA 1611
Query 973 CTGATATCCAAACTTACAATATATTGA 999
||||| || |||||||||||||||||
Sbjct 1612 CTGATGTCGTAACTTACAATATATTGA 1638
Score = 165 bits (89), Expect = 9e-40
Identities = 107/115 (93%), Gaps = 3/115 (3%)
Strand=Plus/Plus
Query 996 TTG-ACTTTTGAGTTTTGGAGATGAATTTATATATATAC--AGCTTTGGCTGCAGAGCTT 1052
||| ||||| ||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct 2149 TTGTACTTTCGAGTTTTGGAGATGAATGTATATATATACAGAGCTTTGGCTGGAGAGCTT 2208
Query 1053 CTAGTGTAGCATCTGGAGAAGTTTGCAACTGAATGTCTAAGTCAAATTGAAGATA 1107
||||||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct 2209 CTAGTGTAGCATCCGGAGAAGTTTGCAACTGAATGTCTAAGTCAAATTTAAGATA 2263
> AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23450654-23452311 FORWARD LENGTH=1572
Length=1572
Score = 732 bits (396), Expect = 0.0
Identities = 714/863 (83%), Gaps = 40/863 (5%)
Strand=Plus/Plus
Query 1 ATGGTTGAAAAGGGATGTCA-ACACGATGTCGTGGCCTTCAACACACTGATGAATGGTCT 59
|||||||||| |||||| | || ||||||||| | || | |||||||||||| |||||
Sbjct 491 ATGGTTGAAACTGGATGT-AGACCCGATGTCGTTACGTTTACCACACTGATGAACGGTCT 549
Query 60 TTGCCGCGAGGGTCGAGTTCTCGAAGCAG-TAGCTCTTGTTGATCGGATGGTTGAA-AAT 117
||| | ||||||||||||||| |||| | |||||||||||||||| ||||| ||| ||
Sbjct 550 TTGTTGTGAGGGTCGAGTTCTCCAAGC-GCTAGCTCTTGTTGATCGTATGGTAGAAGAA- 607
Query 118 GGTCATCAACCTAACGAGGTGACGTATGGAACAATTGTCAATGGAATGTGTAAGATGGGT 177
|||||||||||| | || ||||||||| | |||||| ||||||||||||||
Sbjct 608 GGTCATCAACCT-------T-AC----GGAACAATTATAAATGGATTGTGTAAGATGGGT 655
Query 178 GACACTGACTCTGCCTTGAACCTGCTTAGGAAGATGGATGAAAGCCACATCAAAGCCGAT 237
|||||||| ||||||||||| |||||||| |||||||| |||| ||||||||||||| ||
Sbjct 656 GACACTGAGTCTGCCTTGAATCTGCTTAGTAAGATGGAAGAAACCCACATCAAAGCCCAT 715
Query 238 GTTGTAATCTATACTGCCATCATTGATCGCCTTTGCAAAGACGGGCACCACAGCAAGGCT 297
||||| ||||||| ||||||||| |||||||||||||||||||| || || | | | |||
Sbjct 716 GTTGTCATCTATAATGCCATCATCGATCGCCTTTGCAAAGACGGACATCATATCCATGCT 775
Query 298 CAAAATCTTTTCACTGAAATGCATGACAAAGGAATTTTTCCCAATGTTCTCACCTACAAC 357
||||| |||||||||||||||||||||||||||||||| ||| ||||| | ||||||| |
Sbjct 776 CAAAACCTTTTCACTGAAATGCATGACAAAGGAATTTTCCCCGATGTTATTACCTACAGC 835
Query 358 TGTATGATAGACGGTTGTTGTAGTTATGGTAAATGGACTGATGCGGAGCAACTGCTACGT 417
||||||||||| || |||| | | ||||| ||||||||||||||||||| |||| |||
Sbjct 836 GGTATGATAGACTCTTTTTGTCGCTCTGGTAGATGGACTGATGCGGAGCAATTGCTGCGT 895
Query 418 GATATGATCGAGAG-CAATGTCGACCCTGATGTTGTAACTTTCAATGCATTGATCAATGC 476
||||||||||| || ||| || | ||||||||||||||||||| |||||||||||||||
Sbjct 896 GATATGATCGAAAGGCAAA-TCAATCCTGATGTTGTAACTTTCAGTGCATTGATCAATGC 954
Query 477 ATTTGTCAAAGAAGGAAAGGTCTTTGAGGCTGAAGAATTATACCGTGAGATGCTTGG-A- 534
||| ||||||||||||||||||| |||||||||||| ||||| |||| |||||| | |
Sbjct 955 ATTAGTCAAAGAAGGAAAGGTCTCCGAGGCTGAAGAAATATACGGTGACATGCTTCGTAG 1014
Query 535 AGGAATATATTTCCTGAT-ACAATCACATATAATTCATTGATCGATGGATTTTGCAAGCA 593
||| |||||||||| | |||||||||||||| ||| ||||||||||||||||||||||
Sbjct 1015 AGG--TATATTTCCT-ACCACAATCACATATAACTCAATGATCGATGGATTTTGCAAGCA 1071
Query 594 T-AGTCGTCTAGATGATGCGAAGCACATGTTTGATTTGATGGTTAGCAAGGGCTGCTCTC 652
| ||||||| |||||||||||| |||||| |||| ||||| ||||||| |||||||||
Sbjct 1072 GGA-TCGTCTAAATGATGCGAAGCGCATGTTAGATTCGATGGCTAGCAAGAGCTGCTCTC 1130
Query 653 CGAATGTAATCACTATTAATACTCTCAT-AGGTGGATGCTGTAGGGCTAAGAGGGTAGAT 711
|| ||||| ||||| ||| || ||||| | ||| | |||| |||||| ||||| ||
Sbjct 1131 CGGATGTAGTCACTTTTAGCACCCTCATCAA-TGGCTATTGTAAGGCTAAAAGGGTTGAC 1189
Query 712 GATGGAATTAA-ACTTCTCCATGAGATGT-TAAGAAGAGGA-TTAGTTCCTGATTCAGTT 768
||||||| | | || || ||||||| | |||||||| || ||| || || |||||
Sbjct 1190 AATGGAATGGAGATTT-TCTGTGAGATGCATC-GAAGAGGAATT-GTTGCTAATACAGTT 1246
Query 769 TCTTACAAC-ACTCTT-ATTCACGGGTTCTGTCAAGCGGGGGATCTTAATGCTGCTCAAG 826
|||||| | ||| || ||||| ||||| ||||||| ||| ||||| |||| |||||||
Sbjct 1247 ACTTACA-CTACT-TTGATTCATGGGTTTTGTCAAGTGGGTGATCTCGATGCCGCTCAAG 1304
Query 827 ACCTTTTCCAGGAGATGATTTCT 849
||||| || | | |||||| |||
Sbjct 1305 ACCTTCTCAATGTGATGATCTCT 1327
> AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=2001
Length=2001
Score = 671 bits (363), Expect = 0.0
Identities = 703/863 (81%), Gaps = 40/863 (5%)
Strand=Plus/Plus
Query 37 TTCAACACACTGATGAATGGTCTTTGCCGCGAGGGTCGAGTTCTCGAAGCAGTAGCTCTT 96
|||||||||||||| |||||||| |||| || ||||||||||||||||||| |||| ||
Sbjct 685 TTCAACACACTGATAAATGGTCTCTGCCTAGAAGGTCGAGTTCTCGAAGCAGCAGCT-TT 743
Query 97 -GTTGATCGGATGGT-TGAAAATGGTCATCA-AC-CTAACGAGGTGACGTATGGAACAAT 152
|| || |||||| ||||| |||| | | || | | | || || || ||||||||
Sbjct 744 GGTCAATAAGATGGTAGGAAAA-GGTC-T-ACACATTGATGTTGTCACTTACGGAACAAT 800
Query 153 TGTCAATGGAATGTGTAAGATGGGTGACACTGACTCTGCCTTGAACCTGCTTAGGAAGAT 212
||| ||||| ||||||||||||||||||||| | ||||||||||| |||||||| |||||
Sbjct 801 TGTTAATGGCATGTGTAAGATGGGTGACACTAAGTCTGCCTTGAATCTGCTTAGTAAGAT 860
Query 213 GGATGAAAGCCACATCAAAGCCGATGTTGTAATCTATACTGCCATCATTGATCGCCTTTG 272
||| |||| |||||||||| |||||||||| ||||||| |||||||||||||||||||||
Sbjct 861 GGAAGAAACCCACATCAAACCCGATGTTGTGATCTATAGTGCCATCATTGATCGCCTTTG 920
Query 273 CAAAGACGGGCACCACAGCAAGGCTCAAAATCTTTTCACTGAAATGCATGACAAAGGAAT 332
|||||| ||||| || ||| | ||||| ||||||||| |||||||| ||| ||||||||
Sbjct 921 CAAAGATGGGCATCATAGCGATGCTCAGTATCTTTTCAGTGAAATGCTTGAGAAAGGAAT 980
Query 333 TTTTCCCAATGT-TCTCACCTACAACTGTATGATAGACGGTTGTTGTAG-TTATGGTAAA 390
| || ||||| | | ||||||||||||||||||||||||| |||||| || ||||| |
Sbjct 981 TGCGCCAAATGTGT-TTACCTACAACTGTATGATAGACGGTTTTTGTAGCTT-TGGTAGA 1038
Query 391 TGGACTGATGCGGAGCA-ACTGCTACGTGATATGATCGAGA-GCAATGTCGACCCTGATG 448
|||| |||||| | | | || | ||||||||||| || | | || || | |||||||
Sbjct 1039 TGGAGTGATGCCCA-AAGATTGTTGCGTGATATGATTGAAAGGGAA-ATCAATCCTGATG 1096
Query 449 TTGTAACTTTCAATGCATTGATCAATGCATTTGTCAAAGAAGGAAAGGTCTTTGAGGCTG 508
|| ||||||| ||||||||||||| ||||| ||||||||||| ||| | ||||||||||
Sbjct 1097 TTTTAACTTTTAATGCATTGATCAGTGCATCAGTCAAAGAAGGGAAGTTGTTTGAGGCTG 1156
Query 509 AAGAATTATACCG-TGAGATGCTTGGA-AGGAATATATTTCCTGATACAATCACATATAA 566
|| |||| | || ||||||| | | ||| |||||||||||||||| ||||||||||
Sbjct 1157 AAAAATTGT-GCGACGAGATGC-TCCATAGGTGTATATTTCCTGATACAGTCACATATAA 1214
Query 567 TTCATTGATCGATGGATTTTGCAAGCATAGTCGTCTAGATGATGCGAAGCACATGTTTGA 626
||| |||| |||||||||||||||||| |||| | ||||||||||| |||||||||||
Sbjct 1215 CTCAATGATTTATGGATTTTGCAAGCATAATCGTTTCGATGATGCGAAACACATGTTTGA 1274
Query 627 TTTGATGGTTAGCAAGGGCTGCTCTCCGAATGTAATCACTATTAATACTC-TCATAGGTG 685
|||||| | || | | || | | | ||| | ||| ||||||| | |||| | |
Sbjct 1275 TTTGAT-G---GCTA-----G-TC-CAG-ACGTAGTTACTTTTAATAC-CATCATTGACG 1321
Query 686 GATGCTGTAGGGCTAAGAGGGTAGATGATGGAATTAAACTTCTCCATGAGATGT-TAAGA 744
|| |||||||||||||||||||||||| ||||| ||||||||| |||||| | | |||
Sbjct 1322 TATACTGTAGGGCTAAGAGGGTAGATGAAGGAATGCAACTTCTCCGTGAGATATCT-AGA 1380
Query 745 AGAGGATTAGTTCCTGATTCAGTTTCTTACAACACTCTTATTCACGGGTTCTGTCAAGCG 804
|||||||||||| || || || | ||||||||||||||||||||||||||||| ||| |
Sbjct 1381 AGAGGATTAGTTGCTAATACAACTACTTACAACACTCTTATTCACGGGTTCTGTGAAGTG 1440
Query 805 GGGGATCTTAATGCTGCTCAAGACCTTTTCCAGGAGATGATTTCTCA-GGTAAGATGGAT 863
| ||||||||||||| ||||||||||||||||||||||||||||| ||| | || |
Sbjct 1441 GACAATCTTAATGCTGCCCAAGACCTTTTCCAGGAGATGATTTCTCATGGTGTG-TG--T 1497
Query 864 CTTGATACTGCTACTTATAACAT 886
| |||||| ||||| ||||||
Sbjct 1498 CCTGATACCATTACTTGTAACAT 1520
> AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD LENGTH=774
Length=774
Score = 564 bits (305), Expect = 7e-160
Identities = 533/642 (83%), Gaps = 20/642 (3%)
Strand=Plus/Plus
Query 218 AAAGCCACATCAAAGCCGATGTTGTAATCTATACTGCCATCATTGATCGCCTTTGCAAAG 277
|||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |
Sbjct 8 AAAGCCACATCAAAGCCGATGTTGTAATCTCTACTGCCATCGTTGATCGCCTTTGCAAGG 67
Query 278 ACGGGCACCACAGCAAGGCTCAAAATCTTTTCACTGAAATGCATGACAAAGGAATTTTTC 337
||||| |||||| ||| |||||||| |||||||||||||||||||| ||||| |||||||
Sbjct 68 ACGGGAACCACATCAATGCTCAAAACCTTTTCACTGAAATGCATGAGAAAGGTATTTTTC 127
Query 338 CCAATGTTCTCACCTACAACTGTATGATAGACGGTTGTTGT-AGTTATGGTAAATGGACT 396
||||||||||||| ||||| |||||||||||| || |||| | | ||||| ||||| |
Sbjct 128 CCAATGTTCTCACTTACAATTGTATGATAGACTCTTTTTGTCACTC-TGGTAGATGGAGT 186
Query 397 GATGCGGAGCAACTGCTACGTGATATGATCGAGA-GCAATGTCGACCCTGATGTTGTAAC 455
||||| || ||| || | ||| ||||||| || | |||| || | |||||| |||| ||
Sbjct 187 GATGCCGACCAATTGTTGCGTCATATGATTGAAAAGCAAA-TCAATCCTGATATTGTTAC 245
Query 456 TTTCAATGCATTGATCAATGCATTTGTCAAAGAAGGAAAGGTCTTTGAGGCTGAAGAATT 515
||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||| |
Sbjct 246 TTTCAGTGCATTGATCAATGCATTTGTCAAAGAAAGAAAGGTCTCCGAGGCTGAAGAAAT 305
Query 516 ATACC-GTGAGATGCTTGGAAGGAATATATTTCCTGAT-ACAATCACATATAATTCATTG 573
|||| | ||||||||| | ||| |||||||||| | |||||||||||||| ||| ||
Sbjct 306 ATACAAG-GAGATGCTTCGTTGGAGTATATTTCCT-ACCACAATCACATATAACTCAATG 363
Query 574 ATCGATGGATTTTGCAAGCAT-AGTCGTCTAGATGATGCGAAGCACATGTTTGATTTGAT 632
|||||||||||||||||||| | |||| |||||||||| |||| |||||| |||| |||
Sbjct 364 ATCGATGGATTTTGCAAGCAGGA-TCGTGTAGATGATGCAAAGCGCATGTTAGATTCGAT 422
Query 633 GGTTAGCAAGGGCTGCTCTCCGAATGTAATCACTATTAATACTCTCAT-AGGTGGATGCT 691
|| ||||||||||||||||||| ||||| ||||| ||| || || || | ||| | |
Sbjct 423 GGCTAGCAAGGGCTGCTCTCCGGATGTAGTCACTTTTAGCACCCTAATCAA-TGGCTATT 481
Query 692 GTAGGGCTAAGAGGGTAGATGATGGAATTAA-ACTTCTCCATGAGATGT-TAAGAAGAGG 749
||| |||||| ||||| || ||||||| | | || || ||||||| | |||||||
Sbjct 482 GTAAGGCTAAAAGGGTTGACAATGGAATGGAGATTT-TCTGTGAGATGCATC-GAAGAGG 539
Query 750 ATTAGTTCCTGATTCAGTTTCTTACAAC-ACTCTT-ATTCACGGGTTCTGTCAAGCGGGG 807
| ||||| || || ||||| |||||| | ||| || ||||| ||||| ||||||| |||
Sbjct 540 AATAGTTGCTAATACAGTTACTTACA-CTACT-TTGATTCATGGGTTTTGTCAAGTGGGT 597
Query 808 GATCTTAATGCTGCTCAAGACCTTTTCCAGGAGATGATTTCT 849
||||| |||| |||||||||||| || | ||||||||||||
Sbjct 598 GATCTCGATGCCGCTCAAGACCTTCTCAATGAGATGATTTCT 639
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 57429423480
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5