BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475070
Length=2346
Score E
Sequences producing significant alignments: (Bits) Value
AT1G62810.1 | Symbols: | Copper amine oxidase family protein |... 3591 0.0
AT3G43670.1 | Symbols: | Copper amine oxidase family protein |... 1413 0.0
> AT1G62810.1 | Symbols: | Copper amine oxidase family protein
| chr1:23257726-23261966 REVERSE LENGTH=2860
Length=2860
Score = 3591 bits (1944), Expect = 0.0
Identities = 2222/2355 (94%), Gaps = 23/2355 (1%)
Strand=Plus/Plus
Query 1 CCTAAACCAATTGCATGGTTAGAATAAATTAGTAACATATCTCATAGATGCGATCAAACG 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct 3 CCTAAACCAATTGCATGGTTAGAATAAATTAGTAAAATATCTCATAGATGCGATCAAGCG 62
Query 61 TATAGGACTTTAAAAAACCTTCATTATTGTTTATTTC---TTTAACATGTTGCTCGACTG 117
|| |||||||| |||| | || ||||||||||||||| |||||||||||| | ||||
Sbjct 63 TACAGGACTTTGAAAAGCGTTAATTATTGTTTATTTCTTATTTAACATGTTGTTTAACTG 122
Query 118 GACTAAGTAATTATTTATCTGTTCTCTCAGCTTTTTATAAGTAACTTTGTGAAAGATAGT 177
||||||||||||||||| ||||||| |||||||||||||||| |||||||||
Sbjct 123 GACTAAGTAATTATTTA-------TCTCAGC-TTTTATAAGTAACTTTCCAAAAGATAGT 174
Query 178 CAAAAGCTCTCACTCAAACGATGGCAGAACCATCTTTTTCTCGCCTCTCTCTCTTGTTCT 237
||||| ||||||||||| |||||||||||||||||||| |||| || | |||||||||||
Sbjct 175 CAAAAACTCTCACTCAATCGATGGCAGAACCATCTTTTGCTCGTCTGTTTCTCTTGTTCT 234
Query 238 TCAGCTTTCTCCTTATCTTCGCCACCTATTCTTGGGT-TTTGGGACCCGACTCAGGCTTC 296
||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||||||||
Sbjct 235 TCAGCTTTCTCCTTATCTTTGCCACCTACTCTTGGGTCTTT-GGACCCGACTCAGGCTTC 293
Query 297 TTGTTCGGTACCCGGGTCCGGAAAACTCTCGGGTCGAATCCTAAAGTCCATGTTGATCAC 356
||||||||||| || ||||||||||||||||| ||||||| | ||||||| ||||| |||
Sbjct 294 TTGTTCGGTACTCGTGTCCGGAAAACTCTCGGCTCGAATCGTCAAGTCCACGTTGACCAC 353
Query 357 TCTTCAGAAAAGCCTCATCATCCACTTGATCCACTAACGGTGCGAGAAATCTCGAGAGTT 416
|||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct 354 TCTTTAGAAAAGCCTCATCATCCACTTGATCCACTAACGGTGCGAGAAATCAATAGAG-T 412
Query 417 C-GAACCATACTCTCGGGTCATGACCCGGGTTTTGGTTCCGGGTCGGCCACGATTCACTC 475
| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 413 CAGAACAATACTCTCGAACCATGACCCGGGTTTTGGTTCCGGGTCGGCCACGATTCACTC 472
Query 476 CATGGCTCTCGATGAGCCAGAGAAGACACGTGTCGTTCAGTGGAAGAAGGGAAATAAGCT 535
|||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||
Sbjct 473 CATGGCTCTCGATGAGCCGGAGAAGTCACGTGTCGTCCAGTGGAAGAAGGGAAATAAGCT 532
Query 536 TCCGTCACGAAGAGCTGCGGTCGTAGCTTATTGGGGTGGTCAAACACATGAGATAACGGT 595
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 533 TCTGTCACGAAGAGCTGCGGTCGTAGCTTATTGGGGTGGTCAAACACATGAGATAACGGT 592
Query 596 GGATCTTGATTCGGGTCGGGTCGTTTCTGATGTTG-TTAACCGGACTTCAGGGTATCCGA 654
||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||
Sbjct 593 GGATCTTGATTCGGGTCGGGTAGTTTCTGATG-TGATTAACCGGACTTCAGGGTATCCGA 651
Query 655 CTCTCACCTTGAACGACGTCTTCGCGGCTTCGCAGGTTCCTTTGAAGAGCTTGGAATTCA 714
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 652 TTCTCACCTTGAACGACGTCTTCGCTGCTTCGCAGGTTCCTTTGAAGAGCTTGGAATTTA 711
Query 715 ACCGCTCGATCGAAGCGCGTGGGGTTAAGTTTTCCGATTTAGCTTGCATTACACCGTTTG 774
||||||| || ||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 712 ACCGCTCCATTGAAGCTCGTGGGGTTAAGTTTTCCGATTTAGCTTGCATCACACCGTTTG 771
Query 775 CGGGATGGTTTGGA-CATGAGGAAGAAGGACGTAGAGTCATAAGAGTCCAATGTTACACG 833
| |||||||||||| | ||||||||||||||||||||||||||||| ||||||| ||||
Sbjct 772 CCGGATGGTTTGGATC-GGAGGAAGAAGGACGTAGAGTCATAAGAGTTCAATGTTTCACG 830
Query 834 TTACAAGGCACTACTAATTATTTTATGAGACCACTCGAAGGTCTTTATGTAACGGTCGAC 893
|||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 831 TTACAAGGCACTACCAATTATTTTATGAGACCACTCGAAGGACTTTATGTAACGGTCGAT 890
Query 894 CTAGACAAATTGGAAGTTATCAAGATCGTCGATAAAGGCCCAATTCCGATTCCCAAAGCC 953
|||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct 891 CTAGACAAATTGGAGGTTATCAAGATCATCGATAAAGGCCCAATTCCAATTCCCAAAGCC 950
Query 954 TCCGGTACAGAATACCGGTTTGGTGTTCAGAATAAACCGGTGCATATGGATCGAATTAAC 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 951 TCCGGTACAGAATACCGGTTTGGTGTTCAGAATAAACCGGTGCATATGGATCGTATTAAC 1010
Query 1014 CCGATTTCGATGGAGCAACCGGATGGTCCTAGTTTTAGGGTCGAAGATGGACATTTGGTT 1073
|||||||||||||||||||| || ||||| |||||||||||||||||||| |||||||||
Sbjct 1011 CCGATTTCGATGGAGCAACCTGACGGTCCCAGTTTTAGGGTCGAAGATGGGCATTTGGTT 1070
Query 1074 AAGTGGGCTAATTGGGTTTTCCATGTTAAAGCAGACCAACGAGCCGGTATGATCATATCT 1133
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1071 AAGTGGGCTAATTGGGTTTTCCATGTTAAAGCTGACCAACGAGCCGGTATGATCATATCT 1130
Query 1134 CAGGCCACGGTTCGTGACTCCGAGACAGGTGAACCAAGAAGTGTGATGTACAAAGGGTTC 1193
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1131 CAGGCCACGGTTCGTGACTCCGAGACAGGTGAACCAAGAAGTGTGATGTACAAAGGATTC 1190
Query 1194 CCATCAGAGTTGTTTGTACCGTACATGGATCCC-GAGGAAGGATGGTACTACAAAGGTTA 1252
||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct 1191 CCATCAGAGTTGTTTGTACCGTACATGGA-CCCTGAGGAAGGATGGTACTACAAAGGTTA 1249
Query 1253 TATGGATGCAGGCGAGCTCGGTTTAGGACCCACAGCCATGCCGCTCGTGCCCCTCAACGA 1312
||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||
Sbjct 1250 TATGGATGCAGGCGAGCTCGGTTTAGGACCCACGGCAATGCCGCTCGTGCCTCTCAACGA 1309
Query 1313 TTGCCCTCGAAATGCTTACTACATAGACGGTGTTTTCGCCTCTCCAGACGGCACACCCAT 1372
||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct 1310 TTGCCCTCGAAATTCTTACTATATAGACGGTGTTTTCGCCTCTCCAGACGGCAAACCCAT 1369
Query 1373 TGTTCAACCTAATATGATATGCTTGTTTGAACGCTATGCAGGCGACATCAGCTGGCGACA 1432
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1370 TGTTCAACCTAATATGATATGCTTGTTTGAACGCTATGCAGGCGATATCAGCTGGCGACA 1429
Query 1433 TTCTGAGATCCTTTTTACCAATGCCGATATAAGAGAGTCAAGGCCAAAAGTTACATTGGT 1492
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1430 TTCTGAGATCCTTTTTGCCAATGCCGATATAAGAGAGTCAAGGCCAAAAGTTACATTGGT 1489
Query 1493 CGCTCGAATGGCAACTTCGGTTGGAAATTACGACTATATTTTCGATTGGGAGTTTCAGAC 1552
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1490 AGCTCGAATGGCAACTTCGGTTGGAAATTACGACTATATTTTCGATTGGGAGTTTCAGAC 1549
Query 1553 TGATGGTTTAATCCGTGTTACGGTCGCGGCTTCGGGAATGTTAATGGTGAAAGGGACACC 1612
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1550 TGATGGTTTGATCCGTGTTACGGTCGCGGCTTCGGGAATGTTAATGGTGAAAGGGACACC 1609
Query 1613 TTATGATAATGTAGATGACTTAGGTGATATGGAGGATGATTCTGGACCGTTGATCTCTGA 1672
||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct 1610 TTACGATAATGTAGATGACTTAGGTGATAGGGAGGATGATGCTGGACCGTTGATCTCTGA 1669
Query 1673 GAATGTGATTGGAGTCGTCCATGATCATTTCATAACGTTTCATCTAGACATGGACATTGA 1732
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 1670 GAATGTGATTGGAGTCGTTCATGATCATTTCATAACGTTTCATCTAGACATGGATATTGA 1729
Query 1733 TGGACCAATGAATAATTCTTT-GTTCAAGGTTCATCTAGAGAAGCAGAGAGTTCCAACAG 1791
|||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct 1730 TGGACCGATGAATAATTCTTTGGTT-AAGGTTCATCTAGAGAAGCAGAGAGTTCCAACAG 1788
Query 1792 GAAAATCGCCGAGGAAGAGTTACTTGAAGATCAAGAAATACATAGCCAAGACTGAGAAAG 1851
|||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct 1789 GAAAATCGCCAAGGAAGAGTTACTTGAAGGTCAAGAAATATATAGCCAAGACTGAGAAAG 1848
Query 1852 ATGCTCAGATCAAATTGAGCATTTATGACCCATATGAATTCCACATTGTGAACCCGAACC 1911
||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||
Sbjct 1849 ATGCTCAGATCAAGTTGAGCCTCTATGACCCATATGAATTCCACATTGTGAACCCGAACC 1908
Query 1912 GAAAATCTCGGATCGGAAACCTGGCTGGTTACAGGATCATACCGGGTGGTAATGCAGCGA 1971
||||||||||| | ||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct 1909 GAAAATCTCGGGTAGGAAACCCGGCTGGTTACAGGATCGTACCGGGTGGTAATGCAGCGA 1968
Query 1972 GTTTGCTTGATCACGACGATCCTCCTCAAATTCGAGGTGCATTCACCAATAATCAGATAT 2031
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1969 GTTTGCTTGATCACGATGATCCTCCTCAAATTCGAGGTGCATTCACTAATAATCAGATAT 2028
Query 2032 GGGTGACTCCATATAACCGGTCAGAACAATTTGCTGGAGGAGTTCTAATTTACCAGAGCC 2091
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct 2029 GGGTGACTCCATATAACCGGTCAGAACAATATGCCGGAGGAGTTCTAATTTACCAGAGCC 2088
Query 2092 AAGGTGATGACACACTACAAGTTTGGTCAGACCGGGACCGTTCGATCGAAAACAAGGACA 2151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2089 AAGGTGATGACACACTACAAGTTTGGTCAGACCGGGACCGTTCGATCGAAAACAAGGACA 2148
Query 2152 TAGTGCTGTGGTACACACTAGGGTTCCATCACGTACCTTGCCAAGAAGATTATCCGGTTA 2211
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 2149 TAGTACTGTGGTACACACTAGGGTTCCATCACGTACCTTGTCAAGAAGATTATCCAGTTA 2208
Query 2212 TGCCAACCGTCGCAGCTAGCTTTGAGCTTAAACCGGCCAATTTCTTTGAATCCAATCCGA 2271
|||||||||| || ||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct 2209 TGCCAACCGTTGCGGCTAGCTTTGAACTTAAACCAGCAAATTTCTTTGAATCCAATCCGA 2268
Query 2272 TTCTTGGGGCTGCTCCTTTCTTCGAAAAAGACTTACCAGTCTGTAGACCGTTGGCTTCGT 2331
|||||||| |||||||||||||||||||||||||||| ||||||||||| || ||||| |
Sbjct 2269 TTCTTGGGTCTGCTCCTTTCTTCGAAAAAGACTTACCGGTCTGTAGACCATTTGCTTCAT 2328
Query 2332 CTTGATTGGTTCTGT 2346
||||| ||||||||
Sbjct 2329 CTTGACCGGTTCTGT 2343
> AT3G43670.1 | Symbols: | Copper amine oxidase family protein
| chr3:15567099-15569901 FORWARD LENGTH=2276
Length=2276
Score = 1413 bits (765), Expect = 0.0
Identities = 1606/2010 (80%), Gaps = 66/2010 (3%)
Strand=Plus/Plus
Query 362 AGAAAAGCCTCATCATCCACTTGATCCACTAACGGTGCGAGAAATCTCGAGAGTTCGAAC 421
||| |||||||| || |||||||| ||||||||| | ||||| |||||| | |||
Sbjct 153 AGAGAAGCCTCACCACCCACTTGACCCACTAACGACACCTGAAATAAAGAGAGTCCAAAC 212
Query 422 CATACTCTCGGGTCATGACCCGGGTTTTGGTTCCGGGTCGGCCA-CGATTCACTCCATGG 480
||| |||||||||||||| |||||||| || |||||||| ||| | |||||| ||||||
Sbjct 213 CATCCTCTCGGGTCATGATCCGGGTTTCGGGTCCGGGTCAACCATC-ATTCACGCCATGG 271
Query 481 CTCTCGATGAGCCAGAGAAGAC-ACGTGTCGTTCAGTGGAAGAAGGGAAATAAG-CTTCC 538
||||||| ||||| || ||| | ||||||| | | ||||||||| || || | || ||
Sbjct 272 CTCTCGACGAGCCGGATAAG-CAACGTGTCATCCGGTGGAAGAAAGGTGAT-CGTCTCCC 329
Query 539 GTCACGAAGAGCTGCG-GTCGTAGCTTAT-TGGGGTGGTC-AAACACATGAGATAACGGT 595
| | |||||||| | | || | || ||| | || | | | || | | | |||||
Sbjct 330 GCCGCGAAGAGCGGAGATTC-TTGC-TATGTCTAACGG-CGAGAGTCACGTGCTCACGGT 386
Query 596 GGATCTTGATTCGGGTCGGGTCGTTTCTGATGTT-GTTAACCGGACTTCAGGGTATCCGA 654
||||||| | || |||||||| ||||||||| || || |||| ||||| || || ||||
Sbjct 387 GGATCTTAAATCCGGTCGGGTTGTTTCTGAT-TTGGTCAACCCGACTTTTGGATACCCGA 445
Query 655 CTCTCACCT-TGAACGACGTCTTCGC-GGCTTCGCAGGTTCCTTTGAAGAGCTTGGAATT 712
||| | || |||| || || |||| | | || |||||||||| |||||| |||| ||
Sbjct 446 TTCTTA-CTATGAAGGATATCATCGCAGTC-TCACAGGTTCCTTACAAGAGCGTGGAGTT 503
Query 713 CAACCGCTCGATCGAAGCGCGTGGGGTTAAGTTTTCCGATTTAG-CTTGCATTACACCGT 771
||| ||||| ||||||||||||||| || ||| |||| ||| | ||| ||||||||||
Sbjct 504 CAATCGCTCAATCGAAGCGCGTGGGATTCCGTTCTCCGGTTT-GATTTGTATTACACCGT 562
Query 772 TTGCGGGATGGTTTGGACATGAGGAAGAAGGACGTA-GAGTCAT-AAGAGTCCAATGTTA 829
| || || |||| ||||| || ||||||||||| | ||||||| |||| |||||||||
Sbjct 563 TCGCCGGTTGGTATGGACCGGACGAAGAAGGACG-ACGAGTCATAAAGA-TCCAATGTTT 620
Query 830 CACGTTA-CAAGGCACTACT-AATTAT-TTTATGAGACC-ACTCGAAGGTCTTTATGTAA 885
| | | |||| |||| | |||| | | |||||||| | ||||||| |||||| |||
Sbjct 621 CTC-AAAGCAAGACACT-GTCAATT-TCTACATGAGACCTA-TCGAAGGACTTTATTTAA 676
Query 886 CGGTCGACCTAGACAAATTGGAAG-TTATCAAGATCGTCGATAAAGGCCCAATTCCGATT 944
| ||||| | || ||||| | || | |||||||| || || || || || ||||| ||
Sbjct 677 CCGTCGATATGGATAAATTAG-AGATCATCAAGATTGTAGACAATGGACCGGTTCCGGTT 735
Query 945 CCCAAAGCCT-CCGGTACAGAATACCGGT-TTGGTGTTCAGAAT-AAACCGGTGCATATG 1001
||| ||| || ||||||| ||||| | | | ||| ||| ||| ||| |||| |||||
Sbjct 736 CCC-AAGTCTACCGGTACGGAATATAGATATGGGT-TTCTTAATGAAA-CGGTATATATG 792
Query 1002 GATCGAATTAACCCGATTTCGATGGAGCAACCGGATGGTCCTAGTTTT-AGGGTCGAAGA 1060
|| || | ||||| || ||||||||||||||||| ||||| |||||| | || || ||
Sbjct 793 GACCGTGTCAACCCAATGTCGATGGAGCAACCGGACGGTCCAAGTTTTCA-AGTTGAGGA 851
Query 1061 TGGACATTTGGTTAAGTGGGCTAATTGG-GTTTTCCATGTTAAAGCAGACCAACGAGCCG 1119
|||| | |||||||||||||| |||||| ||| ||| ||||| | || ||||| ||||
Sbjct 852 TGGATACTTGGTTAAGTGGGCGAATTGGAAATTT-CATATTAAACCGGATCAACGTGCCG 910
Query 1120 GTATGATCATATCTCAGGCCACGGTTCGTGACTCCGAGACAGGTGAACCAAGAAGTGTGA 1179
||||||| || || ||||| || |||||||| ||| ||||||||||| |||||||||| |
Sbjct 911 GTATGATTATCTCACAGGCTACAGTTCGTGATTCCAAGACAGGTGAAGCAAGAAGTGTAA 970
Query 1180 TGTACAAAGGGTTCCCATCAGAGTTGTTTGTACCGTACATGGATCCCGAGGAAGGATGGT 1239
|||||||||| || | || |||||||| |||||| | |||||||| | |||||| ||||
Sbjct 971 TGTACAAAGGTTTTGCGTCGGAGTTGTTCGTACCGAATATGGATCCAGGGGAAGGTTGGT 1030
Query 1240 ACTAC-AAAGGTTATATGGATGCAGGCGAGCTCGGTTTAGGACCCACAGCCATGCCGCTC 1298
| | | |||| ||| |||||||| || ||| | ||||||||||| | | ||||| ||
Sbjct 1031 A-TTCAAAAGCTTACATGGATGCTGGAGAGTTTGGTTTAGGACCTTCTTCAATGCCACTT 1089
Query 1299 GTGCCCCTCAACGATTGCCCTCGAAATGCTTACTACATAGACGGTGTT-TTCGCCTCTCC 1357
||||| |||||||| || |||||||| ||||||||||| || ||| || ||||| |||||
Sbjct 1090 GTGCCACTCAACGACTGTCCTCGAAACGCTTACTACATTGATGGT-TTCTTCGCTTCTCC 1148
Query 1358 AGACGGCACACCCATTGTTCAACCTAATATGATATGCTTGTTTGAACGCTATGCAGGCGA 1417
|| |||| || || |||||||||| ||||| |||||||| |||||||| || || ||
Sbjct 1149 TGAAGGCATTCCAATACTTCAACCTAACATGATCTGCTTGTTCGAACGCTACGCGGGTGA 1208
Query 1418 CATC-AGCTGGCGACATTCTGAGATCCTTTTTACC-AATGCCGATATAAGAGAGTCAAGG 1475
|| | ||||||||||| |||||||| | || | || || ||||||||||||||||||
Sbjct 1209 CA-CTAGCTGGCGACACTCTGAGATTC-TTCTCCCTGGTGTAGATATAAGAGAGTCAAGG 1266
Query 1476 CCAAAAGTTACATTGGTCGCTCGAATGGCAACTTCGGTTGGAAATTACGACTATATTTTC 1535
|||| |||||| |||| ||| |||||||| ||| ||||| || || || ||||||||
Sbjct 1267 GCAAAGGTTACACTGGTAGCTAGAATGGCATGTTCTGTTGGGAACTATGATTATATTTTT 1326
Query 1536 GATTGGGAGTTTCAGACT-GATGGTTTAATCCGTGTTACGGTCGCGGCTTCGGGAATGTT 1594
|||||||||||||| | | |||||| | || ||||||||||||||||| ||||| |||||
Sbjct 1327 GATTGGGAGTTTCA-AATGGATGGTGTGATTCGTGTTACGGTCGCGGCCTCGGGGATGTT 1385
Query 1595 AATGGTGAAAGGGACACCTTATGATAATGTAGATGACTTAGGTGATATGGAGGATGATTC 1654
||||||||||| || |||| || || || || ||||| ||||| | |||||||||||
Sbjct 1386 GATGGTGAAAGGAACGGCTTACGAAAACGTTGAAGACTTGGGTGAGAAAGAGGATGATTC 1445
Query 1655 TGGACCGTTGATCTCTGAGAATGTGATTGGAGTCGTCCATGATCATTTCATAACGTTTCA 1714
||||||||||||||| || || || || |||||||||||||||||||||||| |||||||
Sbjct 1446 TGGACCGTTGATCTCAGAAAACGTTATAGGAGTCGTCCATGATCATTTCATATCGTTTCA 1505
Query 1715 TCTAGACATGGACATTGATGGACCAATGAATAA-TTCTTTGTTCAAGGTTCATCTAGAGA 1773
||||||||||||||||||||| || || || | ||| ||| ||||||||||||||||
Sbjct 1506 TCTAGACATGGACATTGATGGGTCAGCCAACAACTCCTTCGTT-AAGGTTCATCTAGAGA 1564
Query 1774 AGCAGAGAGTTCCAACAGGAAAATCGCCGAGGAAGAGTTACTTGAAGATCAAGAAATACA 1833
|||||||| ||||| | ||| |||| ||| ||||||||||||||| ||||||||||
Sbjct 1565 AGCAGAGACTTCCACCTGGAGAATCAAGGAGAAAGAGTTACTTGAAGGTCAAGAAATATG 1624
Query 1834 TAGCCAAGACTGAGAAAGATGCTCAGATCAA-ATTGAGCATTTATGACCCATATGAATTC 1892
||||||||||||||||||||||||||||||| || |||| | || ||||| || || |||
Sbjct 1625 TAGCCAAGACTGAGAAAGATGCTCAGATCAAGAT-GAGCCTGTACGACCCCTACGAGTTC 1683
Query 1893 CA-CATTGTGAACCCGAACCGAAAATCTCGGATCGGAAACCTGGCTGGTTACAGGATCAT 1951
|| | |||||||||| |||||| |||||| | || |||| ||||||||||| | | |
Sbjct 1684 CATC-TTGTGAACCCTAACCGACTTTCTCGGTTAGGGAACCCGGCTGGTTACAAGCTTGT 1742
Query 1952 ACCGGGTGGTAATGCAGCGAGTTTGCTTGATCACGACGATCCTCCTCAAATTCGAGGTGC 2011
||| ||||||||||| || |||||||| ||||| || ||||| || ||||| ||||| ||
Sbjct 1743 ACCTGGTGGTAATGCTGCAAGTTTGCTCGATCATGATGATCCACCGCAAATGCGAGGCGC 1802
Query 2012 ATTCACCAATAATCAGATATGGGTGACTCCATATAACCGGTCAGAACAATTTGCTGGAGG 2071
||||| || ||||||||||||||||||| |||||||||||||| |||| ||||||||
Sbjct 1803 TTTCACAAACAATCAGATATGGGTGACTCGGTATAACCGGTCAGAGCAATGGGCTGGAGG 1862
Query 2072 AG-TTCTAATTTACCAGAGCCAAGGTGATGACACACTACAAGTTTGGTCAGACCGGGACC 2130
| || | || |||||||||| ||||| |||||||||||||||||||| ||| | || |
Sbjct 1863 -GCTTTTGATGTACCAGAGCCGTGGTGAAGACACACTACAAGTTTGGTCCGACAGAGATC 1921
Query 2131 GTTCGATCGAAAACAAGGACATAGTGCTGTGGTACACACTAGGGTTCCATCACGTACCTT 2190
| || || || ||||||||||||||| ||||||| ||||||||||||||||||||||| |
Sbjct 1922 GGTCCATTGAGAACAAGGACATAGTGTTGTGGTATACACTAGGGTTCCATCACGTACCGT 1981
Query 2191 GCCAAGAAGATTATCCGGTTATGCCAACCGTCGCAGCTAGCTTTGAGCTTAAACCGGCCA 2250
|||||||||||| ||| || |||||||| | ||| |||||||||| |||||||||| ||
Sbjct 1982 GCCAAGAAGATTTTCCAGTGATGCCAACAATAGCATCTAGCTTTGAACTTAAACCGGTCA 2041
Query 2251 ATTTCTTTGAATCCAATCCGATTCTTGGGGCTGCTCCTTTCTTCGAAAAAGACTTACCAG 2310
||||||| ||||| || ||| | |||||| | | ||||||||||| |||||||||||||
Sbjct 2042 ATTTCTTCGAATCGAACCCGGTACTTGGGATTTCACCTTTCTTCGAGAAAGACTTACCAG 2101
Query 2311 TCTGT-AGACC-GTTGGCTTCGTCTTGATT 2338
||||| | ||| | || |||| |||| |||
Sbjct 2102 TCTGTTAAACCAGATG-CTTCATCTT-ATT 2129
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 116465264400
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5