BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg475074 Length=655 Score E Sequences producing significant alignments: (Bits) Value AT1G62790.1 | Symbols: | Bifunctional inhibitor/lipid-transfer... 734 0.0 > AT1G62790.1 | Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr1:23252313-23253743 FORWARD LENGTH=771 Length=771 Score = 734 bits (397), Expect = 0.0 Identities = 528/586 (90%), Gaps = 29/586 (5%) Strand=Plus/Plus Query 4 aaaag-aaaaaagc--ttagagaggtaaagaaaaaaagaaagaTGAAGACGATGATGATG 60 ||||| |||||||| ||||||| |||| |||||| || || ||||||||||||||| Sbjct 20 AAAAGAAAAAAAGCAAAGAGAGAGGAAAAG-AAAAAA-AATGACGAAGACGATGATGATC 77 Query 61 TTCGCGGCGGCGATGACGGTGATGGCTTTGGTTTCGGTTCCGGCGGTTGAAGCACAGACA 120 || ||||||||||||||||||||||||||| ||| ||||||| | |||||||||| || Sbjct 78 TTTGCGGCGGCGATGACGGTGATGGCTTTGCTTTTGGTTCCGACTATTGAAGCACAAACT 137 Query 121 GAGTGCGTGAGCAAACTAGTCCCTTGCTTCAACGACCTGAACACGACAACAACGCCGGTT 180 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 138 GAGTGCGTGAGCAAGCTAGTCCCTTGCTTCAACGACCTGAACACGACAACAACGCCGGTG 197 Query 181 AAAGAATGTTGCGACTCGATAAAAGAAGCGGTGGAGAAGGAACTTACATGTCTATGTACA 240 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct 198 AAAGAATGTTGCGACTCGATTAAAGAAGCGGTGGAGAAGGAACTTACATGTCTCTGTACA 257 Query 241 ATCTACACCACTCCTGGTTTGCTCTCTCAGTTCAACGTCACCACTGATAAAGCTCTCGGT 300 |||||||||| ||| ||||||||| |||||||||||||||||||||| |||||||||||| Sbjct 258 ATCTACACCAGTCCAGGTTTGCTCGCTCAGTTCAACGTCACCACTGAGAAAGCTCTCGGT 317 Query 301 CTTAGCCGTCGATGCAACGTCACCACTGATCTCTCTGCTTGTACCGCTAAAGGAGCTCCA 360 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 318 CTTAGCCGTCGTTGCAACGTCACCACTGATCTCTCCGCTTGTACCGCTAAAGGAGCTCCA 377 Query 361 TCGCCAAAAGCTTCTTTACCTCCTCCAGC-C--G--GG-AATACCAAAAAAGACGCCGGA 414 ||||||||||||||||||||||||||||| | | || ||||||||||||||||||||| Sbjct 378 TCGCCAAAAGCTTCTTTACCTCCTCCAGCTCCAGCAGGGAATACCAAAAAAGACGCCGGA 437 Query 415 GCTGGGAACAAGCTCGCCGGTTATGGAGCCACCACCTTGATCTTGTCTTTGATCTCATCC 474 |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct 438 GCTGGGAACAAGCTCGCCGGTTATGGAGTCACCACCGTGATCTTGTCTTTGATCTCATCC 497 Query 475 ATCTTCTTCTGAAATCCTTAACCGGATTTATACGGTTTTATTATTATTAGCTCAATAATT 534 ||||||||||||| ||||| ||| |||||||||||||||||||||||||| Sbjct 498 ATCTTCTTCTGAATTCCTTTACC---------CGGTTTTATTATTATTAGCTCAATAA-- 546 Query 535 CACGAGATTTTCGAGATTTGTTTGCTTT-GGCTTAACTTATTTAAT 579 | || |||||||||||||||||| ||||||||||||||||| Sbjct 547 -A-----TTCTCGAGATTTGTTTGCTTTTGGCTTAACTTATTTAAT 586 Score = 113 bits (61), Expect = 2e-24 Identities = 72/77 (94%), Gaps = 2/77 (3%) Strand=Plus/Plus Query 580 TGTTATGTTTTATCATTGATTCATCATTGAGTCCCATGTTAGTATATTTACCGGTT-TAA 638 |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct 622 TGTTATGTATTATCATTGATTCATTATTGAGTCCCATGTTAGTATATTTACCGGTTATAA 681 Query 639 ACCGGACTCTATCATTT 655 | |||||||||||||| Sbjct 682 TC-GGACTCTATCATTT 697 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 31647512610 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5