BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg475085 Length=1773 Score E Sequences producing significant alignments: (Bits) Value AT1G62640.1 | Symbols: KAS III | 3-ketoacyl-acyl carrier protei... 2591 0.0 > AT1G62640.1 | Symbols: KAS III | 3-ketoacyl-acyl carrier protein synthase III | chr1:23192228-23195103 FORWARD LENGTH=1855 Length=1855 Score = 2591 bits (1403), Expect = 0.0 Identities = 1686/1815 (93%), Gaps = 50/1815 (3%) Strand=Plus/Plus Query 1 GCATTGGAATCTCCTCAAAATTGAGCTGTCACACTCACCTCCCCTGTCTCCTCTTCGCTT 60 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 14 GCATTGGAATCTCCTCAAAATCGAGCTGTCACACTCACCTCCCCTGTCTCCTCTTCGCTT 73 Query 61 CGGTACTTCCGAAGATTTGA---T-T------T---T-CTCTCTCACACACACCTAAATT 106 |||||||||||||||||| | | | | | ||||||||||||||||| |||| Sbjct 74 CGGTACTTCCGAAGATTTCATTTTCTAGACACTCCATCCTCTCTCACACACACCTTAATT 133 Query 107 TCGAATTTTTGTCTATTGGTGATTCAATTACTCT-AATTTCGAGCTGAGAGAGACAGACA 165 ||||||||||||| ||||||||| || ||||||| || |||||||||||||| || || Sbjct 134 TCGAATTTTTGTCAATTGGTGATGCAGTTACTCTGAA-CTCGAGCTGAGAGAG--AGGCA 190 Query 166 TAGAGATCCTT-CGATTCGTTGTATCCAAAACATTT---AA---C-TTTTGTTTTTCTTC 217 ||||||||||| ||||||||||||||| ||||||| || | |||||||||||||| Sbjct 191 TAGAGATCCTTGCGATTCGTTGTATCCGTAACATTTAACAATCTCGTTTTGTTTTTCTTC 250 Query 218 TGTTCCTC--TTATC-A-AATC-AATGGCGAATGCATCTGGGTTCTTCACTCATCCTTCA 272 |||||||| ||||| | |||| |||||| |||||||||||||||||||||||||||||| Sbjct 251 TGTTCCTCTATTATCAACAATCAAATGGCTAATGCATCTGGGTTCTTCACTCATCCTTCA 310 Query 273 ATTCCTAACTTACGAAGCAGAATCCATGTTCCGATTAGAGTTTCTGGATCTGGGTTTTGC 332 ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 311 ATTCCTAACTTGCGAAGCAGAATCCATGTTCCGGTTAGAGTTTCTGGATCTGGGTTTTGC 370 Query 333 GTTTCGAGTCGATTCTCCAAAAGGGTTTTGTGCTCTAGCGTCAGCTCTATCGATAAACAT 392 ||||| | ||||||||| || |||||||||||||||||||||||||| ||||||| || Sbjct 371 GTTTCCAATCGATTCTCTAAGAGGGTTTTGTGCTCTAGCGTCAGCTCCGTCGATAAGGAT 430 Query 393 GCTTCGTCGTCTCCTTCTGAATATCAACGACCCAGGCTAGTGCCGAGTGGCTGCAAATTG 452 |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 431 GCTTCGTCTTCTCCTTCTCAATATCAACGACCCAGGCTAGTGCCGAGTGGCTGCAAATTG 490 Query 453 ATTGGATGTGGTTCAGCAGTTCCAAGTCTTCTGATTTCTAATGATGATCTCGCTAAAATA 512 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 491 ATTGGATGTGGATCAGCAGTTCCAAGTCTTCTGATTTCTAATGATGATCTCGCTAAAATA 550 Query 513 GTCGATACTAATGATGAATGGATAGCTACTCGTACTGGTATTCGCAACCGTCGAGTTGTC 572 || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 551 GTTGATACTAATGATGAATGGATTGCTACTCGTACTGGTATTCGCAACCGTCGAGTTGTC 610 Query 573 TCAGGCAAAGATAGCTTGGTTGGCTTAGCAGTAGAAGCAGCAACCAAAGCCCTTGAAATG 632 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 611 TCAGGCAAAGATAGCTTGGTTGGCTTAGCAGTAGAAGCAGCAACCAAAGCTCTTGAAATG 670 Query 633 GCTGAGGTTGTTCCGGAAGATATAGACTTAGTCTTGATGTGCACTTCCACTCCTGATGAT 692 |||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||| Sbjct 671 GCTGAGGTTGTTCCTGAAGATATTGACTTAGTCTTGATGTGTACTTCCACTCCTGATGAT 730 Query 693 CTATTTGGTGCTGCTCCACAGATTCAAAAGGCACTTGGTTGCACGAAGAACCCATTGGCT 752 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 731 CTATTTGGTGCTGCTCCACAGATTCAAAAGGCACTTGGTTGCACAAAGAACCCATTGGCT 790 Query 753 TACGATATCACAGCTGCTTGTAGTGGATTTGTTTTGGGTCTAGTTTCAGCTGCTTGTCAT 812 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 791 TATGATATCACAGCTGCTTGTAGTGGATTTGTTTTGGGTCTAGTTTCAGCTGCTTGTCAT 850 Query 813 ATAAGGGGAGGCGGTTTTAAGAATGTTTTAGTGATCGGAGCTGATTCTTTGTCTCGGTTT 872 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 851 ATAAGGGGAGGCGGTTTTAAGAACGTTTTAGTGATCGGAGCTGATTCTTTGTCTCGGTTT 910 Query 873 GTTGACTGGACGGATAGAGGGACTTGCATTCTATTTGGGGACGCTGCTGGTGCTGTGGTT 932 ||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct 911 GTTGATTGGACGGATAGAGGGACTTGCATTCTATTTGGAGATGCTGCTGGTGCTGTGGTT 970 Query 933 GTTCAGGCTTGTGATATTGAAGATGATGGTTTGTTCAGTTTCGATGTGCACAGCGATGGG 992 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 971 GTTCAGGCTTGTGATATTGAAGATGATGGTTTGTTCAGTTTTGATGTGCACAGCGATGGG 1030 Query 993 GACGGTCGAAGACATCTGAATGCTTCTATTAAAGAATCCCAAATCGATGGTGAATCGAGT 1052 || |||||||||||| ||||||||||| ||||||||||||||| |||||||||||| || Sbjct 1031 GATGGTCGAAGACATTTGAATGCTTCTGTTAAAGAATCCCAAAACGATGGTGAATCAAGC 1090 Query 1053 TCCAATGGCTCGGTGTTTGGAGACTTTCCACCAAAACAATCTTCATATTCTTGTATTCAG 1112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1091 TCCAATGGCTCGGTGTTTGGAGACTTTCCACCAAAACAATCTTCATATTCTTGTATTCAG 1150 Query 1113 ATGAATGGGAAAGAGGTCTTTCGCTTTGCTGTAAAATGTGTTCCTCAATCTATTGAGTCC 1172 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct 1151 ATGAATGGAAAAGAGGTCTTTCGCTTTGCTGTCAAATGTGTTCCTCAATCTATTGAATCT 1210 Query 1173 GCTTTACAAAAAGCCGGTCTTCCTGCTTCTGCCATCGACTGGCTCCTCCTCCATCAGGCG 1232 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1211 GCTTTACAAAAAGCTGGTCTTCCTGCTTCTGCCATCGACTGGCTCCTCCTCCACCAGGCG 1270 Query 1233 AACCAGAGAATAATAGACTCTGTGGCTACAAGGCTGCATTTTCCACCAGAGCGAGTCATA 1292 ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| Sbjct 1271 AACCAGAGAATAATAGACTCTGTGGCTACAAGGCTGCATTTCCCACCAGAGAGAGTCATA 1330 Query 1293 TCGAATTTGGCTAATTACGGTAACACGAGCGCTGCTTCCATCCCTCTGGCTCTTGATGAG 1352 ||||||||||||||||| |||||||||||||||||||| || || ||||||||||||||| Sbjct 1331 TCGAATTTGGCTAATTATGGTAACACGAGCGCTGCTTCGATTCCGCTGGCTCTTGATGAG 1390 Query 1353 GCAGTTAGAAGCGGAAAAGTTAAACCAGGACATACCATAGCAACATCCGGTTTTGGAGCC 1412 ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1391 GCAGTGAGAAGCGGAAAAGTTAAACCAGGACATACCATAGCGACATCCGGTTTTGGAGCC 1450 Query 1413 GGTTTAACGTGGGGATCAGCAATTGTCCGATGGAGATGAATGGCTAAGTCCGACA-TGTA 1471 |||||||||||||||||||||||| | |||||||| ||||||||||||||| ||| |||| Sbjct 1451 GGTTTAACGTGGGGATCAGCAATTATGCGATGGAGGTGAATGGCTAAGTCCAACAATGTA 1510 Query 1472 AGTTAACTTCAGAGCCAAAGttttttttCTCCCCCGACGAACACTGGAAATTGGTTTAAA 1531 |||||||||||||||||||| |||||| ||||| ||| ||||||||||||||||||||| Sbjct 1511 AGTTAACTTCAGAGCCAAAGCTTTTTT-CTCCCTCGAGGAACACTGGAAATTGGTTTAAC 1569 Query 1532 CGGTCTTGTTAAGCCCGGTTAAACTAGAGGTAAAGCGCATTTTGTCTGAATTCGGTCTCT 1591 |||||||||| || |||||||||||| ||||||||| |||||||||||||||| |||||| Sbjct 1570 CGGTCTTGTTTAGTCCGGTTAAACTAAAGGTAAAGCACATTTTGTCTGAATTCAGTCTCT 1629 Query 1592 CTCTTTTTGAAGGTTTCATTGTTGTTACGTGTT-A--TTT---A-TT-T--CGAATGCTA 1641 || |||||||||||| |||||||||||| |||| | ||| | || | ||||||||| Sbjct 1630 CTTTTTTTGAAGGTT-CATTGTTGTTACTTGTTTAACTTTGTTAGTTATTTCGAATGCTA 1688 Query 1642 ATAATgaaaaagaaggaaaagaaaaagTAGCATTCTTT-ATCATTTCTTGTTTGTAATGT 1700 |||| ||||||||| ||| ||||| | |||||||||| ||||||||||||||||||||| Sbjct 1689 ATAACCAAAAAGAAG-AAA-GAAAAGGGAGCATTCTTTCATCATTTCTTGTTTGTAATGT 1746 Query 1701 TAAGACAACATTTCTCCATTTGCTTAA-TCTTGTT-TTCTTCTGTTTTTGAGAACTATTA 1758 ||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||| Sbjct 1747 TAAGACAACATTTCTCCATTTGCTTAAATCTT-TTCTTCTTCTGTTTTTGAGAACTATTA 1805 Query 1759 GGATCAGAATGGTTT 1773 | |||| |||| ||| Sbjct 1806 GAATCAAAATGTTTT 1820 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 87700352115 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5