BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475091
Length=1338
Score E
Sequences producing significant alignments: (Bits) Value
AT1G63340.1 | Symbols: | Flavin-containing monooxygenase famil... 1116 0.0
AT1G62580.1 | Symbols: | Flavin-binding monooxygenase family p... 736 0.0
> AT1G63340.1 | Symbols: | Flavin-containing monooxygenase family
protein | chr1:23491882-23494019 REVERSE LENGTH=1275
Length=1275
Score = 1116 bits (604), Expect = 0.0
Identities = 761/835 (91%), Gaps = 17/835 (2%)
Strand=Plus/Plus
Query 1 ATGGTACCAGCAGTGAATCCTCCTACCACATCATGCCACGTAGCAGTAATCGGTGCCGGA 60
|||||||||||||| |||||||||||||||||| |||||| |||||||||||||| |||
Sbjct 1 ATGGTACCAGCAGTAAATCCTCCTACCACATCACACCACGTGGCAGTAATCGGTGCTGGA 60
Query 61 GCAGCGGGACTCGTGGCAGCCCGAGAGCTCCGCCGCTG-TGGCCATTCTGTGGTTGTCTT 119
||||| ||||||||||| || |||||||||||||| || ||||| ||||| ||||| ||
Sbjct 61 GCAGCCGGACTCGTGGCTGCTCGAGAGCTCCGCCG-TGAGGGCCACTCTGTCGTTGTTTT 119
Query 120 CGAACGTGGGAACCAAATCGGAGGCGTGTGGGCTTACACGCCTAACGTCGAACCCGACCC 179
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 120 CGAACGTGGGAACCAAATCGGAGGCGTGTGGGCTTACACGCCTAATGTCGAACCTGACCC 179
Query 180 GCTTAGCATCGACCCGACCCGACCCGTAATCCATTCTAGCCTCTACAGTTCTCTCCGAAC 239
||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 180 GCTTAGCATTGACCCGACCCGACCCGTAATCCATTCGAGCCTCTATAGTTCTCTCCGAAC 239
Query 240 CATCATCCCACGAGAATGCATGGGTTTCACCGATTTCCCGTTTTCAACCCGACCCGAGAA 299
||||||||||||||||||||||||||||| |||||||||||||| || ||||||| ||
Sbjct 240 AATCATCCCACGAGAATGCATGGGTTTCACTGATTTCCCGTTTTCGACTGGACCCGAAAA 299
Query 300 CAGGTCTAGAGATCCGAGAAGACATCCGGGTCATAGT-GAGGTTCTTGCTTACCTGAAAG 358
|| |||||||||||||||| ||||||||||||||| | ||||||||||| ||||||||||
Sbjct 300 CAAGTCTAGAGATCCGAGACGACATCCGGGTCATA-TAGAGGTTCTTGCATACCTGAAAG 358
Query 359 ACTTTGCGAGAGA-GTTCAAGATCGAAGAGCTGATTCGGTTCGACACGGAGGTTGTGAGG 417
|||||||||| || ||||||||| || ||| ||||||||||||| |||||||||||||||
Sbjct 359 ACTTTGCGAG-GAAGTTCAAGATGGACGAGATGATTCGGTTCGAGACGGAGGTTGTGAGG 417
Query 418 GCTGAGCCGGCGGCG-AAGAATCCCAAAAAGTGGAGAGTCGAGTCTAGAAACTCCGGTGA 476
||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||
Sbjct 418 GCTGAGCCGGCGGCGGAA-AATCCAAAAAAGTGGAGAGTCGAGTCTAGAAACTCCGGTGA 476
Query 477 CGTTTCCGACGAGATTTATGACGCCATCGTCGTTTGTAACGGTCACTATACGGAGCCTCG 536
| ||||||||||||||||| ||| | || |||||||||||||||||||| ||||||||
Sbjct 477 TATCTCCGACGAGATTTATGATGCCGTAGTTGTTTGTAACGGTCACTATACAGAGCCTCG 536
Query 537 TCATGCTCTAATCCCTGGCATAGATTCATGGCCAGGAAAACAAATTCACAGCCACAATTA 596
|||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||
Sbjct 537 TCATGCTCTAATCCCTGGCATAGATTCATGTCCTGGAAAGCAAATTCACAGCCACAATTA 596
Query 597 TCGAGTTCCAGATCAATTTAGAGATCAGGTGGTGGTGGTGATCGGAAGCTCAGTGAGCGG 656
| || ||||||||||||||| ||||||||| | || | |||||||||||||||
Sbjct 597 TAGAATTCCAGATCAATTTAAAGATCAGGTAAACA-G-TG---G-AAGCTCAGTGAGCGG 650
Query 657 AGTCGATATAAGCAGAGACATAGCAAATGTTACAAAAGAAGTCCATGTATCTTCAAGATC 716
||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct 651 AGTCGATATAAGCAGAGACATAGTAAATGTTACAAAAGAAGTCCATATATCTTCAAGATC 710
Query 717 CACTACACCGGAAACATACGAAAAACTTCCCGGTTACGACAACTTATGGCTTCACTCTAC 776
|||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 711 AACTAAACCGGAAACATACGAAAAACTTTCCGGTTACGACAACTTATGGCTTCACTCTAA 770
Query 777 TATTGAAACTGTCCGAGAAGATGGTTCGGTGGTATTTG-GAATCG-AAAGACGGT 829
||||||||||||||||||||||||||||||||||||| ||| || |||||||||
Sbjct 771 TATTGAAACTGTCCGAGAAGATGGTTCGGTGGTATTTAAGAA-CGGAAAGACGGT 824
Score = 324 bits (175), Expect = 2e-87
Identities = 195/205 (95%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 1128 GTTTGTATACGATAATTGGCTTGCTGATCAATGTGACTATCCTCGGATCGAAAAATGGAG 1187
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 1053 GTTTGTATACGATAATTGGCTTGCTGATCAATGTGACTATCCTCGTATCGAGAAATGGAG 1112
Query 1188 AGAGCAAATGTTCTACAATGTGTTCAAGAGAATACAAGCCCAATCCAGTACATACAAGGA 1247
|||||||||||| ||||| |||||||||||||||||| |||||||||||||||| |||||
Sbjct 1113 AGAGCAAATGTTTTACAAGGTGTTCAAGAGAATACAATCCCAATCCAGTACATATAAGGA 1172
Query 1248 CGATTGGGATGATGATCACCTCATCGCAGAAGCATATGAAGATTTCGTCAAATTCACATC 1307
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1173 CGATTGGGACGATGATCACCTCATCGCAGAAGCATATGAAGATTTCGTCAAATTCCCATC 1232
Query 1308 TAACAATCCAAGTTCTTTAATCGAA 1332
|||| |||| |||||||||||||||
Sbjct 1233 TAACTATCCCAGTTCTTTAATCGAA 1257
Score = 148 bits (80), Expect = 1e-34
Identities = 84/86 (98%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 827 GGTACAAATATTACTTCCCATTTCTCGACACGAAAGGCGAAGTAATCGTTGAGGATAACC 886
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct 854 GGTACAAATATTACTTCCCATTTCTCGACACGAAAGGCGAAGTGACCGTTGAGGATAACC 913
Query 887 GTGTTGGACCATTATATAAGCATGTT 912
||||||||||||||||||||||||||
Sbjct 914 GTGTTGGACCATTATATAAGCATGTT 939
> AT1G62580.1 | Symbols: | Flavin-binding monooxygenase family
protein | chr1:23173333-23176931 FORWARD LENGTH=1494
Length=1494
Score = 736 bits (398), Expect = 0.0
Identities = 505/557 (91%), Gaps = 6/557 (1%)
Strand=Plus/Plus
Query 1 ATGGTACCAGCAGTGAATCCTCCTACCACAT-CATGCCACGTAGCAGTAATCGGTGCCGG 59
|||||||||||||| |||||||||||||||| || |||||| |||||||||||||| ||
Sbjct 1 ATGGTACCAGCAGTAAATCCTCCTACCACATCCA-ACCACGTGGCAGTAATCGGTGCTGG 59
Query 60 AGCAGCGGGACTCGTGGCAGCCCGAGAGCTCCGCCGCTG-TGGCCATTCTGTGGTTGTCT 118
|||||| ||||||||||| || |||||||||||||| || ||||| ||||| ||||| |
Sbjct 60 AGCAGCCGGACTCGTGGCTGCTCGAGAGCTCCGCCG-TGAGGGCCACTCTGTCGTTGTTT 118
Query 119 TCGAACGTGGGAACCAAATCGGAGGCGTGTGGGCTTACACGCCTAACGTCGAACCCGACC 178
|||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 119 TCGAACGTGGGAACCACATCGGAGGCGTGTGGGCTTACACGCCAAACGTTGAACCCGACC 178
Query 179 CGCTTAGCATCGACCCGACCCGACCCGTAATCCATTCTAGCCTCTACAGTTCTCTCCGAA 238
| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 179 CCCTTAGCATCGACCCGACCCGACCCGTAATCCATTCGAGCCTCTACAGTTCTCTCCGAA 238
Query 239 CCATCATCCCACGAGAATGCATGGGTTTCACCGATTTCCCGTTTTCAACCCGACCCGAGA 298
|||||||||||| |||||||||||||||||| |||||||||||||| ||| ||| ||| |
Sbjct 239 CCATCATCCCACAAGAATGCATGGGTTTCACTGATTTCCCGTTTTCGACCAGACTCGAAA 298
Query 299 ACAGGTCTAGAGATCCGAGAAGACATCCGGGTCATAGTGAGGTTCTTGCTTACCTGAAAG 358
|| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct 299 ACGGGTCTAGAGATCCGAGAAGACATCCAGGTCATAGTGAGGTTCTTGCTTACCTGAGAG 358
Query 359 ACTTTGCGAGAGAGTTCAAGATCGAAGAGCTGATTCGGTTCGACACGGAGGTTGTGAGGG 418
|||||| ||| ||||||||||| || ||| ||||||| ||||| ||||||||||||||||
Sbjct 359 ACTTTGTGAGGGAGTTCAAGATTGAGGAGATGATTCGTTTCGAGACGGAGGTTGTGAGGG 418
Query 419 CTGAGCCGGCGGCG-AAGAATCCCAAAAAGTGGAGAGTCGAGTCTAGAAACTCCGGTGAC 477
||||| ||||| | || ||||||||||||||||||||| |||||||||| | ||||||
Sbjct 419 TTGAGCAGGCGGGGGAA-AATCCCAAAAAGTGGAGAGTCAAGTCTAGAAATTTCGGTGAT 477
Query 478 GTTTCCGACGAGATTTATGACGCCATCGTCGTTTGTAACGGTCACTATACGGAGCCTCGT 537
| ||||||||||||||||||||| | || |||||||||||||||||||| |||||||||
Sbjct 478 ATCTCCGACGAGATTTATGACGCCGTAGTTGTTTGTAACGGTCACTATACAGAGCCTCGT 537
Query 538 CATGCTCTAATCCCTGG 554
||||||||||| |||||
Sbjct 538 CATGCTCTAATACCTGG 554
Score = 518 bits (280), Expect = 7e-146
Identities = 331/355 (93%), Gaps = 5/355 (1%)
Strand=Plus/Plus
Query 979 AGCAAGTGGGTAGCCGCGGTTTTGGCGA-GTAGGGTTAAACTCCCCTCACAAGAAGAGAT 1037
||||| |||||||||||||||||||| | |||||||| |||||||||||||| | |||
Sbjct 1126 AGCAAATGGGTAGCCGCGGTTTTGGC-AGGTAGGGTTTCACTCCCCTCACAAG-A-AGA- 1181
Query 1038 GATGGAAGATACAAAGATGTTTTATGCAAAGCTCGAAGCCTCATGTATTCCCAAAAGATA 1097
|||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1182 GATGGAAGATACTAAGATGTTTTATTTGAAGCTCGAAGCCTCATGTATTCCCAAAAGATA 1241
Query 1098 CACACATCTTATGGCAGAATTAGATTCTCAGTTTGTATACGATAATTGGCTTGCTGATCA 1157
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct 1242 CACACATCTTATGGCAGAATTAGATTCTCAGTTTGTATACAATAACTGGCTTGCTGATCA 1301
Query 1158 ATGTGACTATCCTCGGATCGAAAAATGGAGAGAGCAAATGTTCTACAATGTGTTCAAGAG 1217
||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||
Sbjct 1302 ATGTGACTATCCTCGGATCGAGAAATGGAGAGAGCAAATGTTTTACAAGGTGTTCAAGAG 1361
Query 1218 AATACAAGCCCAATCCAGTACATACAAGGACGATTGGGATGATGATCACCTCATCGCAGA 1277
||||||| ||||| |||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 1362 AATACAATCCCAAGCCAGTACATATAAGGACGATTGGGACGATGATCACCTCATCGCAGA 1421
Query 1278 AGCATATGAAGATTTCGTCAAATTCACATCTAACAATCCAAGTTCTTTAATCGAA 1332
||||||||||||||||||||||||| |||||||| |||| |||||||||||||||
Sbjct 1422 AGCATATGAAGATTTCGTCAAATTCCCATCTAACTATCCCAGTTCTTTAATCGAA 1476
Score = 425 bits (230), Expect = 4e-118
Identities = 264/280 (94%), Gaps = 3/280 (1%)
Strand=Plus/Plus
Query 552 TGGCATAGATTCATGGCCAGGAAAACAAATTCACAGCCACAATTATCGAGTTCCAGATCA 611
|||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||| ||
Sbjct 588 TGGCATAGATACATGGCCAGGAAAGCAAATCCACAGCCACAATTATCGAGTTCCAGAACA 647
Query 612 ATTTAGAGATCAGGTGGTGGTGGTGATCGGAAGCTCAGTGAGCGGAGTCGATATAAGCAG 671
| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 648 AGTTAAAGATCAGGTGGTGGTGGTGATTGGAAGCTCAGTGAGCGGAGTCGATATAAGCAG 707
Query 672 AGACATAGCAAATGTTACAAAAGAAGTCCATGTATCTTCAAGATCCACTACACCGGAAAC 731
||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||
Sbjct 708 AGACATAGCAAATGTTACAAAAGAAGTCCATATATCTTCAAGATCAACTAAACCGGAAAC 767
Query 732 ATACGAAAAACTTCCCGGTTACGACAACTTATGGCTTCACTCTACTATTGAAACTGTCCG 791
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 768 ATACGAAAAACTTCCCGGTTACGACAACTTATGGCTTCACTCTAATATTGAAACTGTCCG 827
Query 792 AGAAGATGGTTCGGTGGTATTTG-GAATCG-AAAGACGGT 829
|||||||||||||||||| ||| ||| || |||||||||
Sbjct 828 AGAAGATGGTTCGGTGGTGTTTAAGAA-CGGAAAGACGGT 866
Score = 148 bits (80), Expect = 1e-34
Identities = 84/86 (98%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 827 GGTACAAATATTACTTCCCATTTCTCGACACGAAAGGCGAAGTAATCGTTGAGGATAACC 886
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct 896 GGTACAAATATTACTTCCCATTTCTCGACACGAAAGGCGAAGTGACCGTTGAGGATAACC 955
Query 887 GTGTTGGACCATTATATAAGCATGTT 912
||||||||||||||||||||||||||
Sbjct 956 GTGTTGGACCATTATATAAGCATGTT 981
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 65863115040
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5