BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475100
Length=1811
Score E
Sequences producing significant alignments: (Bits) Value
AT1G62430.1 | Symbols: ATCDS1, CDS1 | CDP-diacylglycerol syntha... 2558 0.0
AT4G22340.3 | Symbols: CDS2 | cytidinediphosphate diacylglycero... 688 0.0
> AT1G62430.1 | Symbols: ATCDS1, CDS1 | CDP-diacylglycerol synthase
1 | chr1:23105941-23109476 REVERSE LENGTH=1856
Length=1856
Score = 2558 bits (1385), Expect = 0.0
Identities = 1656/1778 (93%), Gaps = 54/1778 (3%)
Strand=Plus/Plus
Query 72 GCTTTG-CTTTTCTCTCCAC---AATAATATTCGTTTTCCTCTCCTCGTTCTCGTCGCTG 127
|||||| ||||| ||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct 92 GCTTTGCCTTTTATCTCCACAATAATAATATTCGTTAACCTCTCCTCGTTCTCGTCGCTG 151
Query 128 TTTCTTTCCGATCTTCGCTATATTTTCTGGATTCAAAATCTCTCTTCCTCATTAG--GTA 185
|||||| |||||||| |||||| ||||||||||||||||| |||||| || ||| ||
Sbjct 152 TTTCTTCCCGATCTTTGCTATA-GTTCTGGATTCAAAATCTTTCTTCCCCAATAGATGTT 210
Query 186 TG-CATGTT-ATCTTCTTGATTTTT-TGCAAAAATCAAAACTTTAAAGAGCTATGGAAGA 242
|| | | || || || ||||||||| ||| |||||| ||| ||| |||||||||||| ||
Sbjct 211 TGTC-TCTTAAT-TT-TTGATTTTTCTGC-AAAATC-AAATTTTTAAGAGCTATGGAGGA 265
Query 243 GGAGAATGTTACTAGTTCACCTTCAACACCGGTACATAGGCTTAGACATCGAAGACGTTC 302
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 266 AGAGAATGTTACTAGTTCACCTTCAACACCGGTACATAGGCTTAGGCATCGAAGACGTTC 325
Query 303 TAATGAGGTTGTTATGGATGGGGATAGAGTGAATGCAAGTCCTTTGTTGGTTAATGATCG 362
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 326 TAATGAGGTTGTTACGGATGGGGATAAAGTGAATGCAAGTCCTTTGTTGGTTAATGATCG 385
Query 363 AAATAAGTACAAATCTTTCATGGTCCGGACTTACTCGACTTTATGGATGATTGGTGGTTT 422
||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||
Sbjct 386 GAATAAGTACAAATCTTTCATGGTCCGGACCTACTCTACGTTATGGATGATTGGTGGTTT 445
Query 423 TGTTTTGGTTGTCTACATGGGACATCTCTATATCACAGCTATGGTTGTTGTTATTCAAAT 482
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 446 TGTTTTGGTTGTCTACATGGGTCATCTTTATATCACAGCTATGGTTGTTGTTATTCAAAT 505
Query 483 TTTTATGGCTAAAGAGTTGTTTAATCTGCTGAGGAAAGCACCTGAGGATAAATGTCTCCC 542
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 506 ATTTATGGCTAAAGAGTTGTTTAATCTGCTGAGGAAAGCTCCTGAGGATAAATGTCTCCC 565
Query 543 CTGGATTAAACAGCTTAATTGGCACTTCTTTTTCACTGCCATGCTTTTCGTATATGGCCG 602
|| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 566 CTATATTAAACAGCTCAATTGGCACTTCTTTTTCACTGCCATGCTTTTCGTTTATGGACG 625
Query 603 GATCCTTAGTCAACGGTTAGCTAATACCATGACTGCAGATCAGTTCTTTTATCGGCTAGT 662
||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 626 GATCCTTAGTCAACGGTTAGCCAATACCATGACTGCAGATCAGTTCTTCTATCGGCTAGT 685
Query 663 CACCGGCCTT-ATCAAATACCATATGGCTATCTGTTACTTGTTGTATATTATAGGTTTCA 721
|| ||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 686 CAGCGG-CTTAATCAAATACCATATGGCAATCTGTTACTTGTTGTATATTATAGGTTTCA 744
Query 722 TGTGGTTCATTCTCACATTAAAAAAGAAGATGTACAAGTACCAGTTTGGCCAGTATGCAT 781
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 745 TGTGGTTCATTCTCACATTAAAGAAGAAGATGTACAAGTACCAGTTTGGCCAGTATGCTT 804
Query 782 GGACCCACATGATTTTAATAGTCGTGTTTACTCAATCGTCGTTCACTGTTGCCAACATAT 841
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 805 GGACCCACATGATCTTGATAGTCGTGTTTACTCAATCGTCGTTCACTGTTGCCAACATAT 864
Query 842 TTGAAGGGATCTTCTGGTTTCTTCTTCCAGCATCGTTAATTATAATCAACGACATCTTCG 901
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct 865 TTGAAGGGATCTTCTGGTTTCTTCTCCCAGCATCTTTAATTATAATCAACGACATCTTCG 924
Query 902 CTTACATTTTCGGTTTCTTCTTTGGAAGAACGCCCTTAATAAAGCTGTCTCCAAA-AAAG 960
| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 925 CCTACATTTTCGGTTTCTTCTTTGGAAGAACGCCTTTAATAAAGCTGTCTCCAAAGAAA- 983
Query 961 ACGTGGGAGGGATTCATCGGAGCTTCTGTGACAACTATCATCTCTGCATTTGTTCTCGCA 1020
|| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 984 ACATGGGAGGGATTCATCGGAGCCTCTGTGACAACTATCATCTCTGCATTTGTTCTGGCA 1043
Query 1021 AATATTTTGGGTCGTTACCCTTGGTTGACATGCCCACGACAGGATTTGTCCACTGGGTGG 1080
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1044 AATATTTTGGGTCGTTTCCCTTGGTTGACATGCCCACGACAGGATTTGTCCACTGGCTGG 1103
Query 1081 CTACAGTGTGACGCTGATCCATTGTTCAAACCTGAACCTTTTGCTTTACCTGCATGGATC 1140
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1104 CTACAGTGTGACGCTGATCCATTGTTCAAACCTGAACCTTTTGCTTTACCTGCATGGATT 1163
Query 1141 CCAGAATGGTTTCCTTGGAAGGAAATGACGGTCCTCCCTGTTCAGTGGCATGCATTATGC 1200
|||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct 1164 CCAGAATGGTTTCCTTGGAAGGAAATGACGATCCTCCCTGTTCAGTGGCATGCTTTATGC 1223
Query 1201 CTCGGTTTGTTCGCTTCAATCATAGCACCTTTTGGAGGATTTTTCGCTAGCGGGTTT-AA 1259
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 1224 CTCGGTTTGTTCGCTTCAATCATAGCACCTTTTGGAGGATTTTTCGCTAGC-GGTTTCAA 1282
Query 1260 AAGAGCATTCAAAATCAAGGACTTTGGTGATAGTATTCCAGGACATGGTGGAATCACAGA 1319
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1283 AAGAGCATTCAAAATTAAGGACTTTGGTGATAGTATTCCAGGACATGGTGGAATCACAGA 1342
Query 1320 TAGAATGGACTGCCAGATGGTTATGGCAGTATTTGCTTACATATATCTCCAGTCATTTAT 1379
|||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||
Sbjct 1343 TAGAATGGACTGCCAGATGGTTATGGCAGTATTTGCCTACATATATCTTCAATCATTTAT 1402
Query 1380 AGTCTCCCAAAGCGTTTCGGTTGACAAAATCCTAGACCAGGTATTGACGAACCTTACCTT 1439
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1403 TGTCTCCCAAAGCGTTTCGGTTGACAAAATCCTAGACCAGATATTGACGAACCTTACCTT 1462
Query 1440 CGAGGAACAACAAGCGCTCTTCGTGAAATTAGGACAAATGCTGAAGGACAAGCTCTCATA 1499
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1463 TGAGGAACAACAAGCGCTCTTCGTGAAGTTAGGACAAATGCTGAAGGACAAGCTCTCATA 1522
Query 1500 G--T---T--C------TTT-T---ATTCAGATTCTGATTCTCCCAAGAACAGGTTTCTC 1542
| | | | ||| | ||||||||||||||||||| ||||||||||| |||
Sbjct 1523 GGCTCCATTGCCAAAAGTTTCTTTTATTCAGATTCTGATTCTCC-AAGAACAGGTTCCTC 1581
Query 1543 TGGAATATCCTTTTATCTTTGTCCTTTACTAGAGACAATAAATTTAAAATTGGAT-ACGA 1601
|||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||
Sbjct 1582 TGGAATATCCTTTTATCTTTGTCCTT-ACTAGAGACAATAAATTTAAAATTGGATTAAGA 1640
Query 1602 TTTGTT-TT-C-TGCCATTGTAAATCCTCTCGAAATTTGTCGAAAAT--TAGAAGttttt 1656
|||||| || | |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1641 TTTGTTGTTTCCTGCCATTGTAAATCCTCTCGAAATTTGTCGAAAAAAATAGAAGTTTTT 1700
Query 1657 ttttC-AAGTCTTCTCATTTGATACAATAGGTTTGAAGGAAGTTGTATCTACCTACTATC 1715
|||| ||||||||||||| ||||||| |||||||||||||||||||||||| |||||||
Sbjct 1701 TTTTTTAAGTCTTCTCATTGGATACAAAAGGTTTGAAGGAAGTTGTATCTAC-TACTATC 1759
Query 1716 TCTACTTATTTAGTAGCTTTGGTGGTTT--AGTTGTATTTTGTATATTGGTTAAAAATTG 1773
| ||||||||||||||||||||||||| || ||||||||||||||||||||||| | |
Sbjct 1760 T--ACTTATTTAGTAGCTTTGGTGGTTTTTAGCTGTATTTTGTATATTGGTTAAAA-T-G 1815
Query 1774 AAACGATATTTGGTTTGTTTGTCTCATGATTCGATTTG 1811
|||| | |||||||||||||||||||||||||||||||
Sbjct 1816 AAACAACATTTGGTTTGTTTGTCTCATGATTCGATTTG 1853
> AT4G22340.3 | Symbols: CDS2 | cytidinediphosphate diacylglycerol
synthase 2 | chr4:11799959-11802828 REVERSE LENGTH=1742
Length=1742
Score = 688 bits (372), Expect = 0.0
Identities = 906/1158 (78%), Gaps = 59/1158 (5%)
Strand=Plus/Plus
Query 363 AAATAAGTACAAATC-TTTCATGGTCCGGA-CTTACTCGACTTTATGGATGATTGGTGGT 420
||| || |||||||| |||| | | | || | ||||| ||||| |||||||| ||||||
Sbjct 409 AAA-AAATACAAATCGTTTC-TCATTC-GAGCATACTCCACTTTCTGGATGATAGGTGGT 465
Query 421 TTTG-TTTTGGTTGTCTACATGGGACATCTCTATATCACAGCTATGGTTGTTGTTATTCA 479
|||| | || | || ||| |||| |||||||| || ||||| ||||| |||||||||||
Sbjct 466 TTTGCTCTT-ATAGTTTACCTGGGTCATCTCTACATTACAGCCATGGTGGTTGTTATTCA 524
Query 480 AATTTTTATGGCTA-AAG-AGTTGTTTAATCTGCTGAGGAAAGCACCTGAGGATAAA-TG 536
|| || ||||| | || | || |||||| ||||||| ||| | | ||| |||||| |
Sbjct 525 GATATTCATGGC-ACGAGAACTT-TTTAATTTGCTGAGAAAAACTCATGAAGATAAACAG 582
Query 537 TCTCCCCTGG-ATTA-AACAGCTTAATTGGCACTTCTTTTTCACTGCCATGCT-TTTCGT 593
|| |||||| ||| | | || ||||||||||||||||| || || ||||| ||| ||
Sbjct 583 -CT-CCCTGGTTTTAGATTA-CTGAATTGGCACTTCTTTTTTACAGCAATGCTCTTT-GT 638
Query 594 ATATGGCCGGATCCTTAGTCAACGGTTAGCT-AATACCATGACTGCAGATC--AGTTCTT 650
|||||| || || |||||||||||| ||| | || || ||||| |||| | || || |
Sbjct 639 ATATGGTCGAATACTTAGTCAACGGCTAG-TCAACACTGTGACTCCAGA-CAAAG-TCCT 695
Query 651 TTATCGGCTAGTCACCGGCCTTATCAAATACCATATGGCTATCTGTTACTTGTTGTATA- 709
||||| || ||||| |||| ||||||||||| ||||| |||||||||| |||||||
Sbjct 696 ATATCGACTGGTCACAAGCCTCATCAAATACCACATGGCAATCTGTTACTCCTTGTATAT 755
Query 710 TTATAGG-TTTCATGTGGTTCATTCTCACATTAAAAAAGAAGATGTACAAGTACCAGTTT 768
|| | || ||| | ||||| |||||||| | ||||||||||||||||| || ||||||
Sbjct 756 TTCT-GGCTTT-GTTTGGTTTATTCTCACGCTGAAAAAGAAGATGTACAAATATCAGTTT 813
Query 769 GGCCAGTATGCATGGACCCACATGATTTTAATAGTCGTGTTTACTCAATCGTCGTTCACT 828
|||| ||||||||||| || ||||| ||||| || ||||||||||| || || ||||||
Sbjct 814 AGCCAATATGCATGGACACATATGATATTAATTGTGGTGTTTACTCAGTCCTCATTCACT 873
Query 829 GTTGCCAACATATTTGAAGGGATCTTCTGGTTTCTTCTTCCAGCATC-GTTAATTATAAT 887
|| |||||||| |||||||| |||||||||||||||||||| ||||| || || | ||
Sbjct 874 GTCGCCAACATCTTTGAAGGAATCTTCTGGTTTCTTCTTCCTGCATCACTT-ATCGTCAT 932
Query 888 CAACGACATCTTCGCTTACAT-TTTCGGTTTCTTCTTTGGAAGAACGCCCTTAATAAAGC 946
||| ||||| || || || || | | |||||||||||||||||||| || || || |||
Sbjct 933 CAATGACATATTTGCATATATCTGT-GGTTTCTTCTTTGGAAGAACACCGTTGATCAAGT 991
Query 947 TGTCTCCAAA-AAAGACGTGGGAGGGATTCATCGGAGCTTCTGTGACAACTA-TCATCTC 1004
| || ||||| ||| || |||||||| ||||| ||||||||| | || || | | || ||
Sbjct 992 TATCACCAAAGAAA-ACATGGGAGGGTTTCATTGGAGCTTCTATTACCAC-AGTGATTTC 1049
Query 1005 TGCATTTGTTCTCGCAAATATTTTGGGTCGTTACCCT-TGGTTGACATG-CCCACGACAG 1062
|||||| | || |||||||| ||||||||| ||| ||| ||||||| |||| || ||
Sbjct 1050 TGCATTCCTGCTTGCAAATATAATGGGTCGTT-TCCTGTGGCTGACATGTCCCA-GAGAG 1107
Query 1063 GATTTGTCCACTGGGTGGCTACAGTGTGACGCTGATCCATTGTTCAAACCTGA-ACCTTT 1121
||| | || || || ||||| | |||||| ||| |||| ||||||| | || | |
Sbjct 1108 GATCTATCGACAGGCTGGCTCCTCTGTGACCCTGGTCCACTGTTCAAGCAAGAGA-CACA 1166
Query 1122 TGCTTTACCTGCATGGATCCCAGAATGGTTTCCTTGGAAGGAAATGACGGTCCTCCCTGT 1181
||||||||| | |||||| | || ||| | |||||||||||||| || | || || ||
Sbjct 1167 TGCTTTACCAGGATGGATTTCTGATTGGCTCCCTTGGAAGGAAATTTCGATTCTACCAGT 1226
Query 1182 TCAGTGGCATGCAT-TATGCCTCGGTTTGTTCGCTTCAATCATAGCACCTTTTGGAGGAT 1240
||||||||||| | |||| || || |||||||| || || ||||| |||||||| || |
Sbjct 1227 CCAGTGGCATGC-TCTATGTCTTGGATTGTTCGCCTCTATAATAGCTCCTTTTGGTGGCT 1285
Query 1241 T-TTTCGCTAGCGGGTTT-AAAAGAGCATTCAAAATCAAGGACTTTGGTGATAGTATTCC 1298
| ||| || || ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1286 TCTTT-GCCAG-TGGTTTCAAAAGAGCATTCAAAATCAAGGACTTTGGTGATAGTATTCC 1343
Query 1299 AGGACATGGTGGAATCACAGATAGAATGGACTGCCAGATGGTTATGGCAGTATTTGCTTA 1358
|||||||| ||||| |||||||||||||| || |||||||| ||||| || ||||| ||
Sbjct 1344 CGGACATGGCGGAATTACAGATAGAATGGATTGTCAGATGGTGATGGCTGTTTTTGCCTA 1403
Query 1359 CATATATC-TCCAGTCATTTATAGTCTCCCAAAG-CGTTTCGGTTGACAAAATCCTAGAC 1416
||||||| || | || ||| | || || ||| | | || || || || || |||||
Sbjct 1404 TATATATCATCAA-TCGTTTGTTGTA-CCTGAAGTCCTCTCTGTGGATAAGCTCTTAGAC 1461
Query 1417 CAGGTATTGACGAA-CCTTACCTTCGAGGAACAACAAGCGCT-CTTCGTGAAA-TTAGGA 1473
||| || | || || ||| || || || |||||||||||||| || |||||| || ||
Sbjct 1462 CAGATAATCAC-AAGCCTGACATTGGAAGAACAACAAGCGCTACT-CGTGAAGCTT-GGC 1518
Query 1474 CAAATGCTGAAGGACAAG 1491
|||||| || |||| |||
Sbjct 1519 CAAATGTTGCAGGAAAAG 1536
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 89607972825
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5