BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475117
Length=1726
Score E
Sequences producing significant alignments: (Bits) Value
AT1G62290.1 | Symbols: | Saposin-like aspartyl protease family... 2628 0.0
AT1G11910.1 | Symbols: APA1, ATAPA1 | aspartic proteinase A1 | ... 1339 0.0
> AT1G62290.1 | Symbols: | Saposin-like aspartyl protease family
protein | chr1:23009911-23013492 REVERSE LENGTH=1821
Length=1821
Score = 2628 bits (1423), Expect = 0.0
Identities = 1617/1711 (95%), Gaps = 11/1711 (1%)
Strand=Plus/Plus
Query 19 GGTCAGAATGGGAGTATACACAAGAACAGTTGCGGTTTCGCTCTTTGTGTGGTTCCTACT 78
||||| ||||||||||||| | ||| | |||||| ||||| ||||||||| ||| || ||
Sbjct 77 GGTCAAAATGGGAGTATACTCGAGAGCGGTTGCGTTTTCGGTCTTTGTGTCGTTTCTGCT 136
Query 79 GTTTTTCACTGTC-TCTTCTCAGAGAAATGATGGAACATTCAGAGTTGGCTTGAAAAAAC 137
||||||||||| | | |||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 137 GTTTTTCACTG-CTTATTCTAAGAGAAATGATGGAACATTCAGAGTTGGCCTGAAAAAAC 195
Query 138 TAAAGTTGGATCCCAACAACCGACTTGCAACACGCTTTGGTTCCAAGCAAGAAGAGGCCT 197
| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 196 TGAAGTTGGATCCTAACAACCGACTCGCAACACGCTTTGGTTCCAAGCAAGAAGAGGCCT 255
Query 198 TGAGGTCCTCTTTACCTTCGTACAACAACAATCTTGGTAGTGATTCTGGAGATGCTGACA 257
|||| || ||||| | |||||||||||||||||||||| ||||||||||||||||||| |
Sbjct 256 TGAGATCTTCTTTGCGTTCGTACAACAACAATCTTGGTGGTGATTCTGGAGATGCTGATA 315
Query 258 TTGTCCCGCTCAAGAATTACTTGGATGCTCAGTATTATGGTGAGATTGCTATCGGTACTC 317
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 316 TTGTCCCGCTCAAGAATTACTTGGATGCTCAGTACTATGGTGAGATTGCTATTGGTACTC 375
Query 318 CACCGCAGAAGTTCACTGTCATTTTTGATACCGGAAGCTCTAACCTTTGGGTGCCATCAG 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 376 CACCGCAGAAGTTCACTGTCATTTTTGATACCGGAAGCTCTAACCTTTGGGTGCCATCAG 435
Query 378 GAAAATGTTTTTTCTCGCTGTCTTGTTTCTTTCATGCCAAGTTCAAGTCCTCACGCTCAA 437
||||||||||||||||||||||||||| ||||||||| |||| ||||||||| || ||||
Sbjct 436 GAAAATGTTTTTTCTCGCTGTCTTGTTACTTTCATGCTAAGTACAAGTCCTCGCGATCAA 495
Query 438 GCACATATAAGAAGAGTGGAAAACGTGCCGCAATCCATTACGGCTCAGGATCGATCTCTG 497
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 496 GCACATATAAGAAGAGTGGAAAACGTGCCGCAATCCATTACGGCTCAGGATCAATCTCTG 555
Query 498 GTTTCTTTAGTTATGATGCTGTTACGGTTGGTGATTTGGTTGTCAAAGATCAGGAGTTTA 557
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 556 GTTTCTTTAGTTATGATGCTGTCACGGTTGGTGATTTGGTTGTCAAAGATCAGGAGTTTA 615
Query 558 TTGAGGCAACCAGTGAGCCTGGTTTAACATTCCTGGTGGCTAAGTTTGATGGTCTTCTTG 617
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 616 TTGAGACAACCAGTGAGCCTGGTTTAACATTCCTGGTGGCTAAGTTTGATGGTCTTCTTG 675
Query 618 GTCTTGGATTCCAAGAGATCGCTGTTGGAAACGCTACTCCTGTTTGGTACAATATGCTCA 677
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 676 GTCTTGGGTTCCAAGAGATCGCTGTTGGAAACGCTACTCCTGTTTGGTACAATATGCTCA 735
Query 678 AGCAAGGCCTTATCGAGAGACCGGTGTTTTCATTTTGGCTTAACCGTGACCCAAAGAGTG 737
||||||||||||| |||| ||||| ||||||||||||||||||||||| ||||||||||
Sbjct 736 AGCAAGGCCTTATAAAGAGGCCGGTCTTTTCATTTTGGCTTAACCGTGATCCAAAGAGTG 795
Query 738 AAGAAGGCGGTGAAATCGTATTTGGAGGTGTTGATCCTAAGCATTTCAAAGGAGAACATA 797
|||||||||||||||||||||| |||||||||||||| |||||||| | |||||||||||
Sbjct 796 AAGAAGGCGGTGAAATCGTATTCGGAGGTGTTGATCCAAAGCATTTTAGAGGAGAACATA 855
Query 798 CATTTGTTCCTGTGACACAAAGGGGTTACTGGCAGTTCGACATGGGTGAGGTTCTCATTG 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 856 CATTTGTTCCTGTGACACAAAGGGGTTACTGGCAGTTCGACATGGGTGAGGTTCTCATTG 915
Query 858 CCGGTGATTCTACTGGATATTGTGGAAGTGGTTGTTCGGCGATAGCAGATTCTGGAACGT 917
||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 916 CCGGTGAATCTACTGGATATTGTGGAAGTGGTTGTTCTGCGATAGCAGATTCTGGAACAT 975
Query 918 CTTTACTTGCAGGG-CCGACGGCTGTGATTGCCATGATAAACAAAGCTATTGGAGCCTCT 976
| |||||||| ||| || ||||||||| ||||||||||||| || ||||||||||| |||
Sbjct 976 CGTTACTTGC-GGGTCCAACGGCTGTGGTTGCCATGATAAATAAGGCTATTGGAGCATCT 1034
Query 977 GGAGTTGTTAGCCAGCAGTGCAAGACTGTTGTTGATCAGTATGGACAAACCATTTTGGAT 1036
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1035 GGAGTTGTTAGCCAGCAGTGCAAGACTGTTGTTGACCAGTATGGACAAACCATTTTGGAT 1094
Query 1037 TTACTTTTGGCTGAGACTCAACCAAAGAAGATCTGCTCACAAATTGGTCTTTGCGCTTTC 1096
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct 1095 TTACTTTTGGCTGAGACTCAACCAAAGAAGATTTGCTCACAAATTGGTCTTTGCGCTTAC 1154
Query 1097 GATGGCACCCACGGGGTCAGTATGGGGATTGAGTCGGTGGTGGACAAGGAAAACACGAGA 1156
||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 1155 GATGGCACCCATGGGGTCAGTATGGGGATTGAATCGGTGGTGGACAAGGAAAACACAAGA 1214
Query 1157 TCATCTAGTGGTCTTCGAGATGCCGGTTGTCCTGCATGTGAAATGGCGGTTGTGTGGATA 1216
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 1215 TCATCTAGTGGTCTTCGAGACGCGGGTTGTCCTGCATGTGAAATGGCGGTTGTGTGGATA 1274
Query 1217 CAGAGCCAATTGAGGCAGAACATGACTCAAGAGCGGATAGTGAACTACATTAATGAGATA 1276
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1275 CAGAGCCAATTGAGGCAGAACATGACTCAAGAGAGGATAGTGAACTACATTAATGAGATA 1334
Query 1277 TGCGAGCGCATGCCTAGTCCAAATGGAGAGTCTGCAGTTGATTGCTCACAACTCTC-AAC 1335
||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || ||
Sbjct 1335 TGCGAGCGCATGCCTAGTCCAAATGGAGAGTCTGCTGTTGACTGCTCACAACTTTCTAA- 1393
Query 1336 AATGCCCACTGTTTCATTCACCATTGGAGGCAAAGTATTTGATCTTGCTCCAGAAGAGTA 1395
|||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 1394 AATGCCTACTGTTTCATTCACCATTGGAGGCAAAGTCTTTGATCTTGCTCCCGAAGAGTA 1453
Query 1396 CGTACTGAAGATTGGGGAAGGACCAGTGGCACAATGCATTAGCGGCTTTACCGCACTTGA 1455
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1454 CGTACTGAAGATTGGGGAAGGACCAGTGGCACAATGTATTAGCGGCTTTACCGCACTTGA 1513
Query 1456 CATCCCTCCACCTCGTGGACCTCTCTGGATACTTGGAGATGTGTTTATGGGCAAATACCA 1515
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1514 TATCCCTCCACCTCGTGGACCTCTCTGGATACTTGGAGATGTGTTTATGGGAAAATACCA 1573
Query 1516 CACTGTCTTTGACTTCGGAAACGAGCAGGTTGGGTTCGCAGAAGCTGTGTGAAAAATGTA 1575
||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 1574 CACTGTCTTTGACTTCGGAAACGAGCAGGTTGGCTTCGCAGAAGCCGTGTGAAAAATGTA 1633
Query 1576 ACATCGGTTCGGTCTTTTGTTGATGTGTTTTTGGTGTGAGAGCTTTGCTGTGTTGTGTTT 1635
|||||| | | | ||| |||||| |||||||||||||||||||||| ||||||||||||
Sbjct 1634 ACATCGAT-C--T-TTT-GTTGATATGTTTTTGGTGTGAGAGCTTTGTTGTGTTGTGTTT 1688
Query 1636 ATATGGAAAGGTTTTAAGAGTGAAGCCTTGTTGTTGTTGTTAAAAATGTTTTTCTATAAA 1695
| ||||| ||||||||||| |||||||| |||||||||||||| |||||||| | |||||
Sbjct 1689 ACATGGAGAGGTTTTAAGAATGAAGCCTCGTTGTTGTTGTTAACAATGTTTTGCCATAAA 1748
Query 1696 CATACGTTGAAGCTTTGGAGATGTTTTCTTT 1726
|||||||| ||||||||| ||||||||||||
Sbjct 1749 CATACGTTAAAGCTTTGGGGATGTTTTCTTT 1779
> AT1G11910.1 | Symbols: APA1, ATAPA1 | aspartic proteinase A1
| chr1:4016784-4020983 REVERSE LENGTH=1970
Length=1970
Score = 1339 bits (725), Expect = 0.0
Identities = 1280/1543 (83%), Gaps = 57/1543 (4%)
Strand=Plus/Plus
Query 33 TATACACAAGAACAGTTGCGGTTTCGCTCTTTGTGTGGTTCCTACTGTTTTTCACTGTCT 92
||||| | ||||| ||||| ||||| ||| |||||| ||||| |||| |||| ||| ||
Sbjct 122 TATACTCTAGAACGGTTGCTGTTTCACTCATTGTGTCATTCCTCCTGTGTTTCTCTGCCT 181
Query 93 CTT-CTCAGAGAAATGATGGAACATTCAGAGTTGG-CTTGAAAAAACTAAAGTTGGATCC 150
|| || || | ||||| || || ||||||||||| | |||||||||| ||||||||| |
Sbjct 182 -TTGCTGAGCGCAATGACGGGACCTTCAGAGTTGGAC-TGAAAAAACTCAAGTTGGATTC 239
Query 151 CAACAACCGACTTGCAACACGCTTTGGTTCCAAGCAAGAAGAGGCCTTGAGGTCCTCTTT 210
|| || || |||||| ||||| | | |||||||||||| || || ||| |
Sbjct 240 GAAAAATCGGCTTGCAGCACGCGTCGAATCCAAGCAAGAAAAGCCCCTGA-G-------- 290
Query 211 ACCTTCGTACAACAACAATCTTGGTAGTGATTCTGGAGATGCTGACATTGTCCCGCTCAA 270
| | | | || | | ||||| | ||||||||||||||||| |||| ||| ||
Sbjct 291 AGC-T--T---AC-A-GA-CTTGG-A--GATTCTGGAGATGCTGATGTTGTTGTGCTTAA 338
Query 271 GAATTACT-TGGATGCTCAGTATTATGGTGAGATTGCTATCGGTACTCCACCGCAGAAGT 329
|||||| | | ||||||||||| ||||||||||| || || ||||||||||| |||||||
Sbjct 339 GAATTA-TCTAGATGCTCAGTACTATGGTGAGATCGCCATTGGTACTCCACCTCAGAAGT 397
Query 330 TCACTGTCATTTTTGATACCGGAAGCTCTAACCTTTGGGTGCCATCAGGAAAATGTTTTT 389
||||||| ||||||| || || ||||||||||| |||||||||||| |||||| | ||
Sbjct 398 TCACTGTGGTTTTTGACACTGGGAGCTCTAACCTCTGGGTGCCATCATCAAAATGCTATT 457
Query 390 TCTCGC-TGTCTTGTTTCTTTCATGCCAAGTTCAAGTCCTCACGCTCAAGCACATATAAG 448
|||| | || | ||| |||| ||| |||| | |||||| || || |||||||||||| ||
Sbjct 458 TCTCACTTG-CATGTCTCTTGCATCCCAAATACAAGTCGTCTCGTTCAAGCACATATGAG 516
Query 449 AAGAGTGGAAAACG-TGCCGCAATCCATTACGGCTCAGGATCGATCT-CTGGTTTCTTTA 506
|||| ||||||| | ||||||||| ||||||||| | ||| | || | ||||||| ||||
Sbjct 517 AAGAATGGAAAA-GCTGCCGCAATTCATTACGGCACTGGAGCAAT-TGCTGGTTTTTTTA 574
Query 507 GTTATGATGCTGTTACGGTTGGTGATTTGGTTGTCAAAGATCAGGAGTTTATTGAGGCAA 566
|| |||||||||| || ||||| ||||| |||||||| |||||||||||||| |||||||
Sbjct 575 GTAATGATGCTGTCACAGTTGGCGATTTAGTTGTCAAGGATCAGGAGTTTATCGAGGCAA 634
Query 567 CC-AGTGAGCCTGGTTTAACATTCCTGGTGGCTAAGTTTGATGGTCTTCTTGGTCTTGGA 625
|| || ||||||||| ||||||| | || ||||| ||||||||| | ||||||||||||
Sbjct 635 CCAAG-GAGCCTGGTATAACATTTGTTGTAGCTAAATTTGATGGTATCCTTGGTCTTGGA 693
Query 626 TTCCAAGAGATCGCTGTTGGAAACGCTACTCCTGTTTGGTACAATATGCTCAAGCAAGGC 685
|||||||||||| |||||||||| ||| |||||||||||||||| |||||||||||||||
Sbjct 694 TTCCAAGAGATCTCTGTTGGAAAAGCTGCTCCTGTTTGGTACAACATGCTCAAGCAAGGC 753
Query 686 CTTATCGA-GAGACCGGTGTTTTCATTTTGGCTTAACCGTGACCCA-AAGAGTGAAGAAG 743
|||||| | ||| ||||| ||||||||||||||||||||| | || | || |||||||
Sbjct 754 CTTATCAAGGAG-CCGGTTTTTTCATTTTGGCTTAACCGTAATGCAGATGA-AGAAGAAG 811
Query 744 GCGGTGAAATCGTATTTGGAGGTGTTGATCCTAAGCATTTCAAAGG-AGAACATACATTT 802
| |||||| | |||||||||||||||||||| || |||||||| || | ||||||||| |
Sbjct 812 GTGGTGAACTTGTATTTGGAGGTGTTGATCCAAATCATTTCAAGGGCA-AACATACATAT 870
Query 803 GTTCCTGTGACACAAAGGGGTTACTGGCAGTTCGACATGGGTGAGGTTCTCATTGCCGGT 862
|||||||||||||||| ||| ||||||||||| ||||||||||| ||||| |||| ||||
Sbjct 871 GTTCCTGTGACACAAAAGGGCTACTGGCAGTTTGACATGGGTGATGTTCTTATTGGCGGT 930
Query 863 G-ATTCTACTGGATAT-TGTGGAAGTGGTTGTTCGGCGATAGCAGATTCTGGAACGTCTT 920
| | | ||||| | | |||| |||||| ||||| ||||||||||||||||| || ||||
Sbjct 931 GCA-CCCACTGGGT-TCTGTGAAAGTGGCTGTTCTGCGATAGCAGATTCTGGTACATCTT 988
Query 921 TACTTGCAGGGCCGACGGCTGTGATTGCCATGATAAACAAAGCTATTGGAGCCTCTGGAG 980
| ||||| || || ||| || | || ||||||||||| | ||||||||||| ||||||
Sbjct 989 TGCTTGCCGGTCCAACGACTATAATCACCATGATAAACCATGCTATTGGAGCAGCTGGAG 1048
Query 981 TTGTTAGCCAGCAGTGCAAGACTGTTGTTGATCAGTATGGACAAACCATTTTGGATTTAC 1040
|||||||||||||||||||||||||||| ||||| || || || ||||||||||||||||
Sbjct 1049 TTGTTAGCCAGCAGTGCAAGACTGTTGTGGATCAATACGGGCAGACCATTTTGGATTTAC 1108
Query 1041 TTTTGGCTGAGACTCAACCAAAGAAGATCTGCTCACAAATTGGTCTTTGCGCTTTCGATG 1100
||||| ||||||| ||||| ||||| |||||||| || |||||||| || |||| ||||
Sbjct 1109 TTTTGTCTGAGACCCAACCGAAGAAAATCTGCTCGCAGATTGGTCTGTGTACTTTTGATG 1168
Query 1101 GCACCCACGGGGTCAGTATGGGGATTGAGTCGGTGGTGGACAAGGAAAACACGAGATCAT 1160
| |||| || ||||||||||| ||||||||||||||||||||||||||| | | || |
Sbjct 1169 GTACCCGTGGTGTCAGTATGGGCATTGAGTCGGTGGTGGACAAGGAAAACGCCAAATTGT 1228
Query 1161 CTAGTGGTCTTCGAGATGCCG-GTTGTCCTGCATGTGAAATGGCGGTTGTGTGGATACAG 1219
||| |||| || ||||||| | | ||| |||||||||| ||||| ||||||||||| |||
Sbjct 1229 CTAATGGTGTTGGAGATGCTGCG-TGTTCTGCATGTGAGATGGCTGTTGTGTGGATCCAG 1287
Query 1220 AGCCAATTGAGGCAGAACATGACTCAAGAGCGGATAGTGAACTACATTAATGAGATATGC 1279
||||| |||||||| ||||||||||||||||| ||| |||||||| | || ||| ||||
Sbjct 1288 AGCCAGTTGAGGCAAAACATGACTCAAGAGCGCATATTGAACTACGTCAACGAGCTATGT 1347
Query 1280 GAGCGCATGCCTAGTCCAAAT-GGAGAGTCTGCAGTTGATTGCT-CACAACTCTCAACAA 1337
|| ||| | || || || ||| ||||||||||||||||| || | ||||||| |||||||
Sbjct 1348 GAACGCCTCCCCAG-CCCAATGGGAGAGTCTGCAGTTGACTG-TGCACAACTGTCAACAA 1405
Query 1338 TGCCCACTGTTTCA-TTCACCATTGGAGGCAAAGTATTTGATCTTGCTCCAGAAGAGTAC 1396
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 1406 TGCCCACTGTTTCACTT-ACCATTGGAGGCAAAGTATTTGATCTTGCTCCAGAAGAGTAT 1464
Query 1397 GTACTGAA-GATTGGGGAAGGACCAGTGGCACAATGCATTAGCGGCTTTACCGCACTTGA 1455
|| ||||| | |||| || ||||| |||||||| ||||| || || |||| || |||||
Sbjct 1465 GTTCTGAAAG-TTGGTGAGGGACCTGTGGCACAGTGCATCAGTGGTTTTATTGCTCTTGA 1523
Query 1456 CATCCCTCCACCTCGTGGACCTCTCTGGATACTTGG-AGATGTGTTTATGGGCAAATACC 1514
| | ||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||
Sbjct 1524 CGTTGCTCCACCTCGTGGACCTCTCTGGAT-CTTGGGAGATGTGTTCATGGGCAAATACC 1582
Query 1515 ACACTGTCTTTGACTTCGGAAACGAGCAGGTTGGGTTCGCAGA 1557
|||| || |||||||| || ||||| ||||| ||||| |||||
Sbjct 1583 ACACCGTATTTGACTTTGGTAACGAACAGGTCGGGTTTGCAGA 1625
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 85340926500
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5