BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475124
Length=1839
Score E
Sequences producing significant alignments: (Bits) Value
AT1G62200.1 | Symbols: | Major facilitator superfamily protein... 2643 0.0
AT2G02020.1 | Symbols: | Major facilitator superfamily protein... 743 0.0
> AT1G62200.1 | Symbols: | Major facilitator superfamily protein
| chr1:22982036-22984359 REVERSE LENGTH=1909
Length=1909
Score = 2643 bits (1431), Expect = 0.0
Identities = 1713/1845 (93%), Gaps = 35/1845 (2%)
Strand=Plus/Plus
Query 2 TGAATTCCAAT---GAAGACGAAAGGATAATAATCCTTGACGTTGAAGAATCTCTTCTTA 58
||||||| ||| ||||||||||||| ||| | |||||||||||||||||||||||||
Sbjct 30 TGAATTCGAATGAAGAAGACGAAAGGAGAAT--T-CTTGACGTTGAAGAATCTCTTCTTA 86
Query 59 CACAGGAGGAAGTGAACAATGTCTTGACCGGATTGTCTTCTTCAGCTGAAGATGGTTCTG 118
|||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct 87 CACAGGAGGAAGTGAACAATCACTTGACCGGATTGTCTTCTACAGCTGAAGATGGTTCTA 146
Query 119 TTGACATTTATGGAAACCCACCATCGAAGAAGAAAACTGGAAATTGGAAAGCTTGTCCCT 178
|||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||
Sbjct 147 TTGACATTTATGGAAACCCACCATCGAAGAAGAAGACAGGAAACTGGAAAGCTTGTCCCT 206
Query 179 TTATTCTTGGAAACGAATGTTGTGAGAGACTAGCTTACTATGGAATTGCCAAGAATCTAA 238
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 207 TTATTCTTGGAAACGAATGTTGTGAGAGATTAGCTTACTATGGAATTGCCAAGAATCTAA 266
Query 239 TCACTTATTACACAAGTGAATTACACGAGTCCAATGTTTCTGCAGCTAGCGACGTCATGA 298
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 267 TCACTTACTACACAAGTGAATTACACGAGTCCAATGTTTCTGCAGCTAGTGACGTTATGA 326
Query 299 TTTGGCAAGGAACTTGCTATATCACACCTCTAATTGGAGCTGTTATAGCTGATTCTTACT 358
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 327 TTTGGCAAGGAACTTGCTATATCACACCTCTCATTGGAGCTGTTATAGCTGATTCTTACT 386
Query 359 GGGGAAGATACTGGACTATTGCTTCTTTCTCTGCTATTTATTTCTTTGGAATGGCTTTGT 418
|||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct 387 GGGGAAGATACTGGACCATTGCTTCTTTCTCTGCTATTTATTTCATTGGAATGGCTTTGT 446
Query 419 TGACACTCTCGGCTTCAGTTCCGGGTTTAAAGCCAGCGGAATGTGTTGGCTTTGTTGCGG 478
||||||||||||||||| |||||| |||||||||||||| ||||| |||| ||| |||||
Sbjct 447 TGACACTCTCGGCTTCACTTCCGGTTTTAAAGCCAGCGGCATGTGCTGGCGTTGCTGCGG 506
Query 479 TTCTATGCCCACCAGCAACAACGGTTCAGTATGCGGTTTTCTTTTCAGGACTTTACCTTA 538
||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct 507 CTCTATGCTCACCAGCAACAACGGTTCAGTATGCGGTTTTCTTTACAGGGCTTTACCTTA 566
Query 539 TTGCACTTGGTACTGGAGGTATCAAACCATGTGTTTCATCTTTTGGTGCTGATCAGTTTG 598
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 567 TTGCTCTTGGTACTGGAGGTATCAAACCATGTGTATCATCTTTTGGTGCTGATCAGTTTG 626
Query 599 ATGATACTGACCCGAGGGAACGAGTTAGAAAAGCTTCTTTCTTTAACTGGTTTTACTTCT 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 627 ATGATACTGACCCGAGGGAACGAGTTAGAAAAGCTTCTTTCTTTAACTGGTTTTACTTCT 686
Query 659 CTATCAACATTGGTTCATTTGTCTCATCCACTTTGCTAGTTTGGGTTCAAGAGAATGTCG 718
| |||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||
Sbjct 687 CCATCAACATTGGTTCATTTATCTCATCCACTTTGTTAGTTTGGGTTCAAGAAAATGTCG 746
Query 719 GGTGGGGACTCGGTTTCTTGATTCCCACCGTGTTTATGGGAGCCTCTATCGCGAGTTTCT 778
|||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct 747 GGTGGGGACTCGGTTTCTTGATTCCCACCGTGTTTATGGGAGTCTCTATTGCGAGTTTCT 806
Query 779 TCATTGGAACTCCGCTTTATAGGTTTCAGAAACCGGGAGGTAGCCCGATTACTAGAGTTT 838
|||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct 807 TCATTGGAACTCCGCTTTATCGGTTTCAGAAACCGGGAGGTAGTCCGATTACTAGAGTTT 866
Query 839 GCCAAGTTCTTGTAGCTGCATACCGCAAATGGTATCTCAATCTCCCTGAGGATATCTCAT 898
||||||||||||||||||||||||| |||| | | || ||||||||||| ||||||||||
Sbjct 867 GCCAAGTTCTTGTAGCTGCATACCGTAAATTGAAGCTTAATCTCCCTGAAGATATCTCAT 926
Query 899 TTCTGTATGAAACACAAGAGAAAAGCTCCATAATTGCTGGAAGCAGGAAGATTCAGCACA 958
||||||||||||||| |||||||| |||||| ||||||||||||||||||||||| ||||
Sbjct 927 TTCTGTATGAAACACGAGAGAAAAACTCCATGATTGCTGGAAGCAGGAAGATTCAACACA 986
Query 959 CTGGCGGTTACAAGAAAATATCTGTCCCCTTTCAGTGTCTTGACAAAGCTGCCGTTATCT 1018
||| |||||||||| | | | | || | |||||||||| |||||||
Sbjct 987 CTGACGGTTACAAG----T-T-T--C---TT---G-------ACAAAGCTGCTGTTATCT 1025
Query 1019 CAGAAGATGAATCGAAATCCGGTGCCTTTTCCAACCCATGGAAGCTATGTACCGTAACTC 1078
||||| ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct 1026 CAGAATATGAATCTAAATCCGGTGCTTTTTCCAACCCATGGAAGCTATGTACTGTAACTC 1085
Query 1079 AAGTCGAAGAAGTTAAGATTCTGATCCGTATGTTTCCAATCTGGGCCTCGGGGATCATCT 1138
|||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||
Sbjct 1086 AAGTCGAAGAAGTTAAGACTCTAATCCGTATGTTTCCAATCTGGGCCTCGGGGATCGTCT 1145
Query 1139 ACTCGGTCCTATATTCACAGATTTCCACTCTATTTGTGCAACAAGGACGGGCCATGAACC 1198
|||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct 1146 ACTCGGTCCTATATTCACAGATTTCCACTCTATTCGTGCAACAAGGACGGTCCATGAACC 1205
Query 1199 GGATAATCC-TCTCTTTTGAGATCCCTCCCGCTTCATTTGGGGTTTTCGACACACTTATC 1257
| ||||||| | ||||| ||||||||||| |||||||| |||||||||||||||||||||
Sbjct 1206 GAATAATCCGT-TCTTTCGAGATCCCTCCTGCTTCATTCGGGGTTTTCGACACACTTATC 1264
Query 1258 GTGCTCATATCCATCCCAATCTATGACCGTTTCATCGTACCCTTTGTGAGACGGTTCACA 1317
|||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||
Sbjct 1265 GTGCTCATATCCATCCCAATATATGACCGTTTCCTCGTACCCTTTGTAAGACGGTTCACA 1324
Query 1318 GGTATACCAAAAGGGTTAACTGATCTGCAGCGAATGGGCATTGGTCTTTTTATCTGTGTC 1377
|| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 1325 GGGATACCAAAAGGGTTAACTGATCTGCAGCGAATGGGCATTGGTCTTTTTCTCTCTGTC 1384
Query 1378 CTAAGCATTGCAGCTGCAGCTATTGTTGAGACAGTGCGGTTGCAGCTCATTCAAGACACT 1437
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 1385 CTAAGCATTGCAGCTGCAGCTATTGTTGAGACAGTGCGGTTGCAGCTTGCTCAAGACTTT 1444
Query 1438 ATTTCAATGAGCATATTTTGGCA-AGTCCCTCAGTATATACTAATGGGAATTGCAGAGGT 1496
|| ||||||||||||||||||| | |||||||||| |||||||||||||| ||||||||
Sbjct 1445 GTTGCAATGAGCATATTTTGGCAGA-TCCCTCAGTACATACTAATGGGAATAGCAGAGGT 1503
Query 1497 CTTCTTCTTCGTTGGCCGAGTCGAGTTTTTCTATGACCAATCTCCTGATGCAATGAGAAG 1556
||| |||||| |||| ||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 1504 CTTTTTCTTCATTGGTCGAGTTGAGTTTTTCTATGATGAATCTCCTGATGCAATGAGAAG 1563
Query 1557 TGTCTGCAGCGCTTTGGCACTACTCAATACCGCAGTCGGAAGCTACCTGAGCTCGTTGAT 1616
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1564 TGTATGCAGCGCTTTGGCACTACTCAATACCGCAGTCGGAAGCTACCTGAGCTCGTTGAT 1623
Query 1617 CCTCACTCTTGTGGCGTATTTGAC-GACAATTGGAGGTAAAGATGGTTGGATTCCAGACG 1675
||||||||||||||||||||| || | | |||||||||||||||||||| |||||||||
Sbjct 1624 CCTCACTCTTGTGGCGTATTTCACAG-CTCTTGGAGGTAAAGATGGTTGGGTTCCAGACG 1682
Query 1676 ACCTTAATAAAGGACATCTTGACTACTTCTTCTGGCTTTTGGTCTCTCTTGGACTTATCA 1735
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1683 ACCTTAATAAAGGACATCTTGACTACTTCTTCTGGCTTTTGGTCTCTCTTGGACTTGTCA 1742
Query 1736 ACATTCCTGTCTATGCCTTC-TTCTCTGTTAAGCACACGAAGAAGAAGGCTTTATAAGCT 1794
|||||||||| |||||||| || | |||||||||||| |||||||||||||| ||||||
Sbjct 1743 ACATTCCTGTTTATGCCTTGATT-TGTGTTAAGCACACAAAGAAGAAGGCTTTGTAAGCT 1801
Query 1795 ACTTTTGTAACAAGCTATGCTGTTTTGGTTCATCATGTTCAGGGT 1839
| ||||||||||||||||| |||||||||||||||| |||| |||
Sbjct 1802 ATTTTTGTAACAAGCTATGTTGTTTTGGTTCATCATATTCATGGT 1846
> AT2G02020.1 | Symbols: | Major facilitator superfamily protein
| chr2:479101-481185 FORWARD LENGTH=1708
Length=1708
Score = 743 bits (402), Expect = 0.0
Identities = 670/796 (84%), Gaps = 31/796 (4%)
Strand=Plus/Plus
Query 103 GCTGAAGATGGTTCTGTTGACATTTATGGAAACCCACCATCGAAGAAGAAAACTGGAAAT 162
|||||||||||||| | || ||| ||||||||||||||| |||| ||| ||| |||||
Sbjct 92 GCTGAAGATGGTTCAATAGATATTCATGGAAACCCACCATTGAAGCAGACAACAGGAAAC 151
Query 163 TGGAAAGCTTGTCCCTTTATTCTTGGAAACGAATGTTGTGAGA-GACTAGCTTACTATGG 221
|||||||||||||| || ||| ||| ||||||||| || || | | | ||||| |||||
Sbjct 152 TGGAAAGCTTGTCCATTCATTTTTGCAAACGAATGCTGCGA-ACGGTTGGCTTATTATGG 210
Query 222 AATTGCCAAGAATCTAATCACTTA-TTACACAAGTGAATTACACGAGTCCAATGTTTCTG 280
||||||||||||||| ||||| || || ||||| |||||| || ||| | ||||||||||
Sbjct 211 AATTGCCAAGAATCTCATCACGTACTT-CACAAATGAATTGCATGAGACTAATGTTTCTG 269
Query 281 CAGCTAG-CGACGTCATGATTTGGCAAGGAACTTGCTATATCACACCTCTAATTGGAGCT 339
| ||||| | ||||||||| ||||||||||| || || ||||| ||||| |||||||||
Sbjct 270 CTGCTAGAC-ACGTCATGACATGGCAAGGAACATGTTACATCACTCCTCTTATTGGAGCT 328
Query 340 GTT-ATAGCTGATTCTTACTGGGGAAGATACTGGACTATTGCTTCTTTCTCTGCTATTTA 398
|| ||||||||| |||||||||||||||| ||||||||||||| ||||||||| |||||
Sbjct 329 -TTAATAGCTGATGCTTACTGGGGAAGATATTGGACTATTGCTTGTTTCTCTGCCATTTA 387
Query 399 TTTCTTTGGAATGGCTTTG--TTGACACTCTCGGCTTCAGTTCCGGGT-TTAAAGCCAGC 455
|||| ||||||| ||| ||||||||||| ||||||||||||||| || ||||||||
Sbjct 388 TTTCACCGGAATGG--TTGCATTGACACTCTCAGCTTCAGTTCCGGGTCTT-AAGCCAGC 444
Query 456 GGAATGTGTTGGCTTTGTTGCGGTTCTATGCCCACCAGCAACAACGGTTCAGTATGCGGT 515
|||||| ||||| | | |||||| ||||||||||||| |||||||| | ||||
Sbjct 445 GGAATGCATTGGC-----T-C---TCTATGTCCACCAGCAACAATGGTTCAGTCTACGGT 495
Query 516 TTTCTTTTCAGGACTTTACCTTATTGCACTTGGTACTGGAGGTATCAAACCATGTGTTTC 575
||| |||||||| ||||||||||| || ||||| |||||||| |||||||||||||| ||
Sbjct 496 TTTATTTTCAGGGCTTTACCTTATCGCTCTTGGCACTGGAGGAATCAAACCATGTGTCTC 555
Query 576 ATCTTTTGGTGCTGATCAGTTTGATGATACTGACCCGAGGGAACGAGTTAGAAAAGCTTC 635
||| ||||||||||||||||||||| | || || || || |||||||| |||||||||||
Sbjct 556 ATCCTTTGGTGCTGATCAGTTTGATAAGACCGATCCAAGCGAACGAGTCAGAAAAGCTTC 615
Query 636 TTTCTTTAACTGGTTTTACTTCTCTATCAACATTGGTTCATTTGTCTCATCCACT-TTGC 694
|||||||||||||||||||||| |||||||||||||| | ||||| ||||| ||| || |
Sbjct 616 TTTCTTTAACTGGTTTTACTTCACTATCAACATTGGTGCTTTTGTTTCATCTACTGTT-C 674
Query 695 TAGTTTGGGTTCAAGAGAATGTCGGG-TGGGGACTCGGTTTCTTGATTCCCACCGTGTTT 753
|||||||| ||||||||||| | || |||| | | || |||||||| || ||||||||
Sbjct 675 TAGTTTGGATTCAAGAGAAT-TATGGATGGGAATTAGGATTCTTGATACCTACCGTGTTC 733
Query 754 ATGGGAGCCT-CTA-TCGCGAGTTTCTTCATTGGAACTCCGCTTTATAGGTTTCAGAAAC 811
|||||| | | ||| | |||||||||| |||| || ||||||||||| ||||||||||
Sbjct 734 ATGGGA-CTTGCTACTAT-GAGTTTCTTCTTTGGCACGCCGCTTTATAGATTTCAGAAAC 791
Query 812 CGGGAGGTAGCCCGATTACTAGAGTTTGCCAAGTTCTTGTAGCTGCATACCGCAAATGGT 871
|| ||||||||||||||||||| || ||||||||||||||||| |||||||| |||| |
Sbjct 792 CGAGAGGTAGCCCGATTACTAGCGTCTGCCAAGTTCTTGTAGCCGCATACCGTAAATCGA 851
Query 872 ATCTCAATCTCCCTGA 887
||||||| |||||||
Sbjct 852 ATCTCAAGGTCCCTGA 867
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 91013588085
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5