BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475126
Length=1629
Score E
Sequences producing significant alignments: (Bits) Value
AT1G62180.1 | Symbols: APR2, APSR, PRH43, PRH, ATAPR2 | 5'adeny... 2327 0.0
AT4G21990.1 | Symbols: APR3, PRH-26, PRH26, ATAPR3 | APS reduct... 785 0.0
> AT1G62180.1 | Symbols: APR2, APSR, PRH43, PRH, ATAPR2 | 5'adenylylphosphosulfate
reductase 2 | chr1:22975530-22977602 REVERSE
LENGTH=1766
Length=1766
Score = 2327 bits (1260), Expect = 0.0
Identities = 1450/1542 (94%), Gaps = 12/1542 (1%)
Strand=Plus/Plus
Query 94 TTTTTTGATTAGAAATGGCTTTAGCTGTTACTTCTTCTTCTTCAACTGCGATCTCTGGAT 153
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 124 TTTTTTGATTAGAAATGGCTTTAGCTGTTA---CTTCTTCTTCAACTGCAATCTCTGGAT 180
Query 154 CGAGTTTCTCTCGTTCAGGAGCTTCTTCTGAATCTAAAGCTCTTCAAATCTGTTCGATTA 213
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 181 CGAGTTTCTCTCGTTCTGGAGCTTCTTCTGAATCTAAAGCTCTTCAAATATGTTCGATTA 240
Query 214 GGTTATCAGATCGAACCCATTTGTCCCAGAGACGTTACTCTATGAAACCTTTAAGCGTTG 273
||||||| ||||||||||||||||| |||||||||||||||||||||||||||| || ||
Sbjct 241 GGTTATCTGATCGAACCCATTTGTCTCAGAGACGTTACTCTATGAAACCTTTAAACGCTG 300
Query 274 AGTCACATTCACGAAACGAATCTTGGGTTTCTCGTGCTTCAACTCTAATTGCTCCTGAAG 333
||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 301 AGTCACATTCACGAAGCGAATCTTGGGTTACTCGTGCTTCAACTCTAATTGCTCCTGAAG 360
Query 334 TTGAAGAGAAAGGAGGAGAAGTTGAAGACTTTGAGCAACTTGCTAAAAAGCTTGAAGATG 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 TTGAAGAGAAAGGAGGAGAAGTTGAAGACTTTGAGCAACTTGCTAAAAAGCTTGAAGATG 420
Query 394 CTTCTCCACTTGAAATCATGGATAAAGCTCTTGAGAAGTTT-GGAGACGAAATCGCAATT 452
|||||||||||||||||||||||||||||||||||| | || |||||| |||||||||||
Sbjct 421 CTTCTCCACTTGAAATCATGGATAAAGCTCTTGAGA-GATTCGGAGACCAAATCGCAATT 479
Query 453 GCTTTTAGTGGTGCTGAAGATGTTGCATTGATCGAGTACGCTCGTTTAACTGGAAAGCCT 512
||||||||||| |||||||||||||||||||| || || || |||||||||||||||||
Sbjct 480 GCTTTTAGTGGAGCTGAAGATGTTGCATTGATTGAATATGCACGTTTAACTGGAAAGCCA 539
Query 513 TTTAGGGTTTTTAGTTTAGATACAGGGAGGTTAAACCCGGAAACGTACAGACTCTTTGAT 572
||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||
Sbjct 540 TTTAGGGTTTTTAGTTTAGATACAGGGAGATTAAACCCTGAAACGTACAGGCTCTTTGAC 599
Query 573 GCTGTCGAGAAGCAGTACGGGATTCGAATCGAGTACATGTTTCCTGATGCAGTTGAGGTT 632
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 600 GCAGTCGAGAAGCAGTACGGGATTCGAATTGAGTACATGTTTCCTGATGCAGTTGAGGTT 659
Query 633 CAAGCTTTGGTGAGGAACAAGGGTTTGTTCTCTTTCTATGAGGATGGACATCAAGAGTGT 692
|||||||| ||||||||||||||||||||||| |||||||| ||||| ||||||||||||
Sbjct 660 CAAGCTTTAGTGAGGAACAAGGGTTTGTTCTCATTCTATGAAGATGGTCATCAAGAGTGT 719
Query 693 TGCCGTGTGAGGAAAGTAAGACCTTTGCGTCGTGCTCTTAAGGGTCTTAAAGCTTGGATT 752
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 TGCCGTGTGAGGAAAGTTAGACCTTTGCGTCGTGCTCTTAAGGGTCTTAAAGCTTGGATT 779
Query 753 ACAGGACAGAGGAAAGATCAATCTCCGGGGACGAGATCCGAGATTCCGATTGTTCAGGTT 812
||||||||||||||||| ||||||||||| |||||||| ||||| || ||||||||||||
Sbjct 780 ACAGGACAGAGGAAAGACCAATCTCCGGGTACGAGATCTGAGATCCCTATTGTTCAGGTT 839
Query 813 GATCCTGTGTTTGAAGGGTTAGATGGTGGTGTTGGAAGTCTTGTGAAGTGGAATCCTTTG 872
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 840 GATCCAGTGTTTGAAGGGTTAGATGGCGGTGTTGGAAGTCTTGTGAAGTGGAATCCTTTG 899
Query 873 GCTAATGTTGAAGGAAG-TGATGTTTGGAACTTTTTGAGGACAATGGATGTCCCGGTGAA 931
||||||||||||||| | |||||| ||||||||| |||| || |||||||| ||||||||
Sbjct 900 GCTAATGTTGAAGGA-GCTGATGTGTGGAACTTTCTGAGAACTATGGATGTTCCGGTGAA 958
Query 932 TGCATTACACGCGCAGGGGTATGTGTCAATCGGTTGTGAGCCATGTACTAGGCCGGTGCT 991
|||||| ||||| || ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 959 TGCATTGCACGCACAAGGGTATGTGTCAATCGGGTGTGAGCCGTGTACTAGGCCGGTGCT 1018
Query 992 TCCAGGTCAGCACGAGAGAGAAGGAAGGTGGTGGTGGGAAGATGCTAAAGCTAAAGAATG 1051
|||||| || || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1019 TCCAGGCCAACATGAGAGAGAAGGAAGGTGGTGGTGGGAAGATGCTAAAGCTAAAGAATG 1078
Query 1052 TGGTCTGCACAAAGGGAACATCAAGGAGGAAGATGGTGCTGCGGATTCAAAGCCTGCGGC 1111
|||||| ||||||||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct 1079 TGGTCTACACAAAGGGAACATCAAGGAGGAAGATGGTGCTGCAGACTCAAAGCCTGCTGC 1138
Query 1112 TGTGCAAGAGATATTCGAAAGCAACAATGTGGTTGCATTGAGCAGAGGAGGGGTTGAGAA 1171
||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1139 TGTGCAAGAGATATTTGAAAGCAACAATGTGGTTGCATTGAGCAAAGGAGGGGTTGAGAA 1198
Query 1172 TCTTATGAAGCTAGAGAATCGCAAAGAGGCGTGGTTGGTTGTACTTTACGCTCCTTGGTG 1231
|||| ||||||||||||| || ||||||||||||||||| ||||||||||||||||||||
Sbjct 1199 TCTTTTGAAGCTAGAGAACCGTAAAGAGGCGTGGTTGGTCGTACTTTACGCTCCTTGGTG 1258
Query 1232 CCCTTTCTGCCAGGCGATGGAAGCATCATACATCGAATTGGCTGAGAAACTTGCGGGAAA 1291
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1259 CCCTTTCTGCCAGGCGATGGAAGCATCGTACATCGAATTGGCTGAGAAACTTGCGGGAAA 1318
Query 1292 AGGAGTTAAAGTGGCTAAATTTCGGGCTGACGGTGAGCAGAAGGAGTTTGCTAAGCAAGA 1351
||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||
Sbjct 1319 AGGAGTTAAAGTGGCGAAATTCCGAGCTGACGGTGAGCAGAAGGAGTTTGCTAAGCAAGA 1378
Query 1352 ACTTCAGTTAGGGAGCTTCCCGACGATACTTCTCTTTCCGAAAAGCGCTCCACGAGCTAT 1411
|||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 1379 GCTTCAGTTAGGGAGCTTCCCGACGATACTTCTCTTTCCGAAAAGAGCTCCACGGGCTAT 1438
Query 1412 TAAGTACCCTTCAGAGCATAGAGATGTTGATTCGCTTATGACGTTTGTGAATCTTCTTCG 1471
||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||
Sbjct 1439 TAAGTACCCTTCAGAGCATAGAGATGTTGATTCACTCATGTCGTTTGTGAATCTTCTTCG 1498
Query 1472 ATGAGTTATGAGATCGAAAATCAAAATATTGTGGTGAAGAATGAAAGAGAATTGAGATGA 1531
||||||||||||| |||||| |||| | ||| ||||||||||||||||||||||||||
Sbjct 1499 GTGAGTTATGAGATAGAAAATAAAAAGAGGGTGATGAAGAATGAAAGAGAATTGAGATGA 1558
Query 1532 AGGAGTAATTTCATCTTGGTTATAAAGATTGTGGACCTCAGAGAATAAACAAGAGTT-T- 1589
|||||| |||||||||||||||||| ||||||||| |||||||||||||||||||| |
Sbjct 1559 AGGAGTGATTTCATCTTGGTTATAAT-ATTGTGGACGTCAGAGAATAAACAAGAGTTATT 1617
Query 1590 -CTCTTCTATATGATTTTGTATATTTGTATTGTAGGG-TTTT 1629
|||||||| |||| |||||||||||||||||||||| ||||
Sbjct 1618 ACTCTTCTACATGACTTTGTATATTTGTATTGTAGGGGTTTT 1659
> AT4G21990.1 | Symbols: APR3, PRH-26, PRH26, ATAPR3 | APS reductase
3 | chr4:11657008-11659105 REVERSE LENGTH=1785
Length=1785
Score = 785 bits (425), Expect = 0.0
Identities = 910/1135 (80%), Gaps = 70/1135 (6%)
Strand=Plus/Plus
Query 351 GAAGTTGAAGACTTTGAGCAACTTGCTAAAAAGCTTGA-AG-ATGCTTCTCCACTTGAAA 408
|||||||||||||||||| |||| || ||| || || | || |||||||||| ||||| |
Sbjct 373 GAAGTTGAAGACTTTGAGGAACTAGC-AAAGAGATT-AGAGAATGCTTCTCCTCTTGAGA 430
Query 409 TCATGGATAAAGCTCTTGAGAAGTTT-GGAGACGAAATCGCAATTGCTTTTAGTGGTGCT 467
|||||||||||||||||||||||||| ||| | || || || ||||| |||||||| |||
Sbjct 431 TCATGGATAAAGCTCTTGAGAAGTTTGGGA-ATGACATTGCTATTGCCTTTAGTGGAGCT 489
Query 468 GAAGATGTTGCAT-TGATCGAGTACGCTCGTTTAACTGGAAAG-CCTTTTAGGGTTTTTA 525
||||||||||| | |||| ||||| |||| ||||||||| ||| |||| |||||| || |
Sbjct 490 GAAGATGTTGC-TCTGATTGAGTATGCTCATTTAACTGG-AAGACCTTATAGGGTATTCA 547
Query 526 GTTTAGATACAGGGAGGTTAAACCCGGAAACGTACAGACTCTTTGATGCTGTCGAGAAGC 585
|||| ||||||||||| || || || ||||| || |||||||| ||| | || ||||| |
Sbjct 548 GTTTGGATACAGGGAGATTGAATCCAGAAACATATAGACTCTTCGATACCGTGGAGAAAC 607
Query 586 AGTACGGGATTCGAATCGAGTACATGTTTCCTGATGCAGTTGAGGTTCAAGCTTTGGTGA 645
| ||||| ||||| || ||||| |||||||||||||| ||||||||||||||||| || |
Sbjct 608 ATTACGGTATTCGGATTGAGTATATGTTTCCTGATGCTGTTGAGGTTCAAGCTTTAGTTA 667
Query 646 GGAACAAGGGTTTGTTCTCTTTCTATGAGGATGGACATCAAGAGTGTTGCCGTGTGAGGA 705
|||||||||||||||||||||||||||| ||||| || || |||||||||||| | || |
Sbjct 668 GGAACAAGGGTTTGTTCTCTTTCTATGAAGATGGTCACCAGGAGTGTTGCCGTATTAG-A 726
Query 706 AAG-TAAGACCTTTGCGTCGTGCTCTT-AAGGGTCTTAAA-GCTTGGATTACAGGACAGA 762
||| | ||||||||| | ||||| || |||||| ||| |||||||| || || ||||
Sbjct 727 AAGGTGAGACCTTTGAGGCGTGCG-TTGAAGGGT-TTACGTGCTTGGATCACTGGTCAGA 784
Query 763 GGAAAGATCAATCTCCGGGGACGAGATCCGAGATTCC-GATTGTTCAGGTTGATCCTGTG 821
||||||||||||| || ||||| ||||| |||||||| | |||||||||||||||| |||
Sbjct 785 GGAAAGATCAATCACCCGGGACAAGATCGGAGATTCCTG-TTGTTCAGGTTGATCCAGTG 843
Query 822 TTTGAAGGGTTAGATGGTGGTGTTGGAAGTCTTG-TGAAGTGGAATCCT-TTGGCTAATG 879
|||||||| ||||||||||| ||||| ||| ||| ||||||||||||| ||| ||||||
Sbjct 844 TTTGAAGGATTAGATGGTGGAGTTGGTAGT-TTGGTGAAGTGGAATCCGGTTG-CTAATG 901
Query 880 TTGAAGG-AAGTGATGTTTGGAACTTT-TTGAGGACAATGGATGTCCCGGTGAAT--GCA 935
||||||| || |||||||||||| ||| |||||||| |||||||| || || || ||
Sbjct 902 TTGAAGGGAA-TGATGTTTGGAA-TTTCTTGAGGACGATGGATGTTCCTGTCAACACGC- 958
Query 936 TTACACGC-GCAGGGGTATGTGTCAATCGGTTGTGAGCCATGTACTAG-GCCGGTGCTT- 992
|| ||||| || ||| ||||| |||||||| ||||||||||| || || || ||| ||
Sbjct 959 TT-CACGCTGC-GGGTTATGTTTCAATCGGATGTGAGCCATGCACGAGAGC-GGTT-TTG 1014
Query 993 CCAGGTCAGCACGAGAGAGAAGGAAGGTGGTGGTGGGAAGATGCTAAAGCTAAAGAATGT 1052
|| |||||||| ||||||||||| || |||||||||||||||||||| |||||||| |||
Sbjct 1015 CCGGGTCAGCATGAGAGAGAAGGGAGATGGTGGTGGGAAGATGCTAAGGCTAAAGAGTGT 1074
Query 1053 GGTCTGCACAAAGGGAACATCAAGGAGGA-AG-A-TGGT---GCTGCGG--A-T-TCAAA 1102
|| || ||||||||||| ||||||||| | | | ||| || | | | | ||||
Sbjct 1075 GGCCTTCACAAAGGGAATATCAAGGAGAATACCAATGGAAACGCAACCGCTAATGTCAAC 1134
Query 1103 GC--CTGCGGCTGT-GCAAGAGATATTCGAA-AGCAACAATGTGGTTGCA-TTGAGCAGA 1157
| | || | || || || || ||| || ||| | ||||| || | | ||||||||
Sbjct 1135 GGGACAGCCTCAGTCGCG-GATATCTTC-AATAGCGAGAATGTTGT-GAACTTGAGCAG- 1190
Query 1158 GGAGGGG-TTGAGAATCTT-ATGAAGCTAGAGAATCGCAAAGAGGCGTGGTTGGTTGTAC 1215
| | ||| |||||||| || |||||| ||||||| || |||||||| ||| | ||||| |
Sbjct 1191 GCAAGGGATTGAGAAT-TTGATGAAGTTAGAGAACCGGAAAGAGGCTTGGATCGTTGTGC 1249
Query 1216 TTTACGCTCCTTGGTGCCC-TTTCTGCCAGGCGATGGAAGCATCATAC-ATCGAATTGGC 1273
|||| || || |||||||| ||| || ||||| |||||||| |||| | || ||||||||
Sbjct 1250 TTTATGCACCGTGGTGCCCGTTT-TGTCAGGCAATGGAAGCTTCATTCGAT-GAATTGGC 1307
Query 1274 TGAGAAACTTGCG-GGAAAAGGAGTTAAAGTGGCTAAATTTCGGGCTGACGGTGAGCAGA 1332
|| || || | | |||| || || || || ||||| ||| | ||||| ||||| ||||
Sbjct 1308 GGATAAGCTGG-GAGGAAGTGGTGTGAAGGTTGCTAAGTTTAGAGCTGATGGTGACCAGA 1366
Query 1333 AGGAGTTTGCTAAGCAAGAACTT-CAG-TTAGGGAGCTTCCCGACGATACTTCTCTTTCC 1390
|||| ||||| || ||| | || ||| || || ||||| || || |||||| | || ||
Sbjct 1367 AGGACTTTGCCAAA-AAGGAGTTGCAGCTT-GGAAGCTTTCCAACAATACTTGTGTTCCC 1424
Query 1391 GAA-AAGCGCTCCACGAGCTATTAAGTACCCTTCAGAGCATAGAGATGTTGATTC 1444
|| || | || || || | || ||||| || |||||| | ||||||||||||||
Sbjct 1425 AAAGAA-CTCTTCAAGACCAATCAAGTATCCATCAGAGAAGAGAGATGTTGATTC 1478
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 80471473635
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5