BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475127
Length=1296
Score E
Sequences producing significant alignments: (Bits) Value
AT1G62170.2 | Symbols: | Serine protease inhibitor (SERPIN) fa... 883 0.0
AT2G14540.1 | Symbols: ATSRP2, SRP2 | serpin 2 | chr2:6197663-6... 819 0.0
AT1G62160.1 | Symbols: | Serine protease inhibitor (SERPIN) fa... 606 1e-172
AT1G65385.1 | Symbols: | pseudogene, putative serpin, blastp m... 337 2e-91
> AT1G62170.2 | Symbols: | Serine protease inhibitor (SERPIN)
family protein | chr1:22973840-22975754 FORWARD LENGTH=1728
Length=1728
Score = 883 bits (478), Expect = 0.0
Identities = 648/727 (89%), Gaps = 23/727 (3%)
Strand=Plus/Plus
Query 583 GCCGAAGAAGTGCTTATGGAGGTGAATGCGTGGGCATCAAGTCACACAAATGGTCTCATC 642
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 721 GCCGAAGAAGTGCGTACGGAGGTGAATGCGTGGGCATCAAGTCACACAAATGGTCTCATC 780
Query 643 AAAGATCTTCTTCCTCGTGGATCAGTTACAAGCCTAACCAACCGGATTTATGGAAGCACA 702
||||||||||||||||||||||||||||||||||||||| || || ||||||||||| ||
Sbjct 781 AAAGATCTTCTTCCTCGTGGATCAGTTACAAGCCTAACCGACAGGGTTTATGGAAGCGCA 840
Query 703 TTGTACTTCAAAGGAGCCTGGCAAGACGAATTC-CACAAGTCAATGACGAGACACAAACC 761
||||||||||||||| ||||| | || ||| | || ||||||||||||| | ||||||
Sbjct 841 TTGTACTTCAAAGGAACCTGGGAGGAAAAATACTCA-AAGTCAATGACGAAATGCAAACC 899
Query 762 TTTTTACCTTCTCAATGGAACATCAGTGTCTGTGCCATTCATGAGTAGCTCTGA-AGACC 820
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||
Sbjct 900 TTTTTACCTTCTCAATGGAACATCAGTGTCTGTGCCATTCATGAGTAGCTTTGAGAAAC- 958
Query 821 AATACATTGAGGCTTATGATGGTTTCAAGGTACTCAGGCTTCCTTATCGACAAGGCCGTG 880
||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 959 AATACATTGCGGCTTATGATGGTTTTAAGGTACTCAGACTTCCTTATCGACAAGGCCGTG 1018
Query 881 ACGATACCAACCGCAACTTCT-CAATGTATTTCTATCTCCCTGACAAGAAAGG-GCAATT 938
|| |||||||||||||||| | |||||||| |||||||||| ||||||||||| | ||||
Sbjct 1019 ACAATACCAACCGCAACTT-TGCAATGTATATCTATCTCCCGGACAAGAAAGGTG-AATT 1076
Query 939 GGATAAACTGTTGGGGAGAATGACATCTACTTCTGGATTCTTGGATAGTCATATTCCGGA 998
|||| | || |||| ||||||||||||||| ||||||||||||||||||| | ||| ||
Sbjct 1077 GGATGATCTTTTGGAAAGAATGACATCTACTCCTGGATTCTTGGATAGTCACAATCCAGA 1136
Query 999 AGACAA-AGTTAAAGTTGGTAAATTCAGAATTCCAAAGTTTAAGATCGAATTTGGGTTTG 1057
| | || ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1137 A-AGAAGAGTTAAAGTTGGTAAATTCAGAATTCCAAAGTTTAAGATCGAATTCGGGTTTG 1195
Query 1058 AAGCTTCAAGTGTTTTCAGTGACTTTGAGCTTGATGTGTCATTGTACCAAAAAGCTTTGA 1117
|||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct 1196 AAGCTTCAAGTGCTTTCAGTGACTTTGAGCTTGATGTGTCATTTTACCAAAAAACTTTGA 1255
Query 1118 TTGAGATCGATGAAGAAGGTACTGAAGCTGCTGCTGT-AGCAGCTTTT-GTTC-G-ATGC 1173
|||| ||||||||| ||||||| ||||||| | || | | | || ||| |||| | || |
Sbjct 1256 TTGAAATCGATGAAAAAGGTACCGAAGCTGTTACTTTTA-CTGCATTTCGTTCTGCATAC 1314
Query 1174 AAAGGCTGCCGTTTTG-TGAAGAC-ATTAGATTTTGTAGCAGATCATCCGTTTGTTTTCT 1231
|| ||| | |||| ||||| | ||| |||||||||||||||||||| ||| ||||||
Sbjct 1315 CTTGGTTGC-GCTTTGGTGAAGCCTATT-GATTTTGTAGCAGATCATCCATTTCTTTTCT 1372
Query 1232 TGATTAGAGAA-AACCAAACCGGAACTGTTTTGTTCGCTGGCCAAATCCTT-GATCCTTC 1289
||||||||||| ||| ||||||||||||||||||||||||| |||||| || ||||||||
Sbjct 1373 TGATTAGAGAAGAAC-AAACCGGAACTGTTTTGTTCGCTGGTCAAATC-TTCGATCCTTC 1430
Query 1290 TGTTTAG 1296
|| ||||
Sbjct 1431 TGCTTAG 1437
Score = 734 bits (397), Expect = 0.0
Identities = 530/592 (90%), Gaps = 17/592 (3%)
Strand=Plus/Plus
Query 1 ATGGAGCCCAAGGAGAA-AAAGCAAAAGCTTGACACATCAGAAATCATCGCAAGTCCCTC 59
|||||||| || ||||| ||| ||||||||||||||||||| || |||||||||||||
Sbjct 37 ATGGAGCCAAAAGAGAAGAAA-CAAAAGCTTGACACATCAG-AA--GTCGCAAGTCCCTC 92
Query 60 TCTCTCAAAGACGCATCT--A-AAGAAG--AA-GAAGAAGCAAAAAATCAGAAAATCACA 113
|||||||||||||||||| | |||||| || |||||||||||||||||||||||||||
Sbjct 93 TCTCTCAAAGACGCATCTAAAGAAGAAGAAAACGAAGAAGCAAAAAATCAGAAAATCACA 152
Query 114 AGTAATCACAAGTTCCTCTCTGTCAAAGAATAAAGATTTGGTAATCAAAAGTCCTTCTCT 173
|| |||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct 153 AGAAATCACAAGTCCCTCTCTGTCAAAGAATACAGATTTGGTAATCGCAAGTCCTTCTCT 212
Query 174 AGCAAATATTGATGTGGGAAAAGCAATGAAGAAGCAAAACGATCTCGCTATATTCCTTAC 233
| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 213 ATCAAATATTGATGTGGGAGAAGCAATGAAGAAGCAAAACGATGTCGCTATATTCCTTAC 272
Query 234 GGGGCTAGTAATCTCTTCCGTAGCCAATAA-TACTAATTTTGTCTTCTCTCCTGCATCAA 292
|||| |||||||||||||||||||||| || | |||||||||||||||||||||||||||
Sbjct 273 GGGGATAGTAATCTCTTCCGTAGCCAAAAACT-CTAATTTTGTCTTCTCTCCTGCATCAA 331
Query 293 TCAACACCGTACTCACCATGGTTGCTGCTAGCTCCAGTGATGAAGAAAGTAG-AGAACTA 351
||||| ||| ||||||||||||||||||||| ||| ||| |||| || || | |||||||
Sbjct 332 TCAACGCCGCACTCACCATGGTTGCTGCTAGTTCCGGTGGTGAACAAGGT-GAAGAACTA 390
Query 352 AGATCCTTCATCCTATCCTTCCTTAAGTCTTCCTCAACCGATGAACTTAACGCAGTTTTT 411
|||||||||||||| |||||||| ||||| |||||||| ||||||||||||||| ||||
Sbjct 391 AGATCCTTCATCCTCTCCTTCCTCAAGTCATCCTCAACTGATGAACTTAACGCAATTTTC 450
Query 412 AGCGAAATCTCTTCCACCGTCCTTGTTGATGGAAGCAAAAAAGGCGGCCCCAAAATCGCG 471
|||||||| ||||| ||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 451 CGCGAAATCGCTTCCGTCGTTCTTGTTGACGGAAGCAAAAAAGGCGGCCCCAAAATCGCG 510
Query 472 GTGGTTAATGGTGTTTGGATGGAGAAATCTCTATTTATTAACCCCTCGTCGAAAGATCTC 531
||||||||||| | |||||||| | || |||| | | || |||| |||||||||||||
Sbjct 511 GTGGTTAATGGAATGTGGATGGATCAGTCGCTATCTGTCAATCCCTTGTCGAAAGATCTC 570
Query 532 TTTAAGAAGTTCTTCAAG-GCTGCTTTCGCTCAAGTTGATTTCAGATCCAAG 582
|||||||| ||||||| | |||||||||||||||||||||||||||||||||
Sbjct 571 TTTAAGAATTTCTTCA-GTGCTGCTTTCGCTCAAGTTGATTTCAGATCCAAG 621
> AT2G14540.1 | Symbols: ATSRP2, SRP2 | serpin 2 | chr2:6197663-6199406
REVERSE LENGTH=1499
Length=1499
Score = 819 bits (443), Expect = 0.0
Identities = 924/1149 (80%), Gaps = 61/1149 (5%)
Strand=Plus/Plus
Query 174 AGC-AAATATTGATGTGGGAA-AAGCAATGAAGAAGCAAAACGATCTCGCTATATTCCTT 231
||| ||| |||||| | | || |||| |||||||| |||||||| | || | || |||
Sbjct 93 AGCAAAAGATTGATAT-GCAAGAAGCGATGAAGAACCAAAACGAGGTTTCTCTGTTACTT 151
Query 232 ACGGGGCTAGTAATCTCTTCCGTAGCCAATAATACT--AATTTTGTCTTCTCTCCTGCAT 289
|||| |||||||||| |||||||||| || ||| || | |||||||||||| ||||
Sbjct 152 GTGGGGAAAGTAATCTCTGCCGTAGCCAA-AA-ACTCAAACTGTGTCTTCTCTCCGGCAT 209
Query 290 CAATCAACACCGTACTCACCATGGTTGCTGCTAGCTCCAGTGATGAAGAAAGTAGAGAAC 349
| |||||| |||| |||||| || ||||| | | || || || || | | |
Sbjct 210 CCATCAACGCCGTTCTCACCGTGACCGCTGCCAACACC---GA-CAA-CAA--A-A-CAT 260
Query 350 TAAGATCCTTCATCCTATCCTTCCTTAAGTCTTCCTCAACCGATGA-ACTTAACG-CAGT 407
||||||| |||||||| || || ||||||||||| || ||||| || || |||| || |
Sbjct 261 TAAGATCTTTCATCCTCTCTTTTCTTAAGTCTTCTTCTACCGAAGAGAC-CAACGCCA-T 318
Query 408 -TTTTAGCGAAATCTCTTCCACCGTCCTT-GTTGATGGAAGCAAAAAAGGCGGCCCCAAA 465
|| | |||| || ||||| ||| ||| || ||||| ||| |||||| ||||||
Sbjct 319 CTTCCA-CGAACTCGCTTCCGTCGT-CTTCAAAGACGGAAGTGAAACAGGCGGGCCCAAA 376
Query 466 ATCGCGGTGGTTAATGGTGTTTGGATGGAGAAATCTCTATTTAT-TAACCCC-TCGTCGA 523
|| |||| ||||||||| || ||||||||| |||| || || | ||||||| | | |
Sbjct 377 ATTGCGGCGGTTAATGGAGTGTGGATGGAGCAATCGCT-TTCGTGTAACCCCGAC-TGGG 434
Query 524 AAGATCTCTTTAAGAAGTTCTTCAAGGCT-GCTTTCGCTCAAGTTGATTTCAGATC-CAA 581
||||||| ||| ||| |||||||||||| | ||||||| ||||||||||| || | |||
Sbjct 435 AAGATCTGTTTCTGAACTTCTTCAAGGCTAG-TTTCGCTAAAGTTGATTTCCGA-CACAA 492
Query 582 GGCCGAAGAAGTGCTTATGGAGGTGAATGCGTGGGCATCAAGTCACACAAATGGTCTCAT 641
||| |||||||||| | |||| || ||| ||||||| ||| ||||||| |||| ||||||
Sbjct 493 GGCTGAAGAAGTGCGTCTGGACGTAAATACGTGGGCTTCACGTCACACCAATGATCTCAT 552
Query 642 CAAAGATCTTCTTCCTCGTGGATCAGTTACAAGCCTAACCAACCGGATTTATGGAAGCAC 701
|||||| |||||||||||||||| |||||||||||||| || |||| ||||||| | |
Sbjct 553 CAAAGAAATTCTTCCTCGTGGATCTGTTACAAGCCTAACTAATTGGATATATGGAAACGC 612
Query 702 ATTGTACTTCAAAGGAGCCTGGCAAGACGAATTCCACAAGTCAATGACGAGACACAAACC 761
||||||||||| ||||| ||| || | | |||| | ||||| ||||| ||| | |||||
Sbjct 613 CTTGTACTTCAAGGGAGCTTGGGAAAAGGCATTCGATAAGTCCATGACAAGAGATAAACC 672
Query 762 TTTTTACCTTCTCAATGG-AACATCAGTGTCTGTGCCATTCATGAGTAGCTCTGAAG-AC 819
||| ||||||||||||| || |||||| |||||||| |||||||| |||| || || |
Sbjct 673 ATTTCACCTTCTCAATGGCAA-ATCAGTCTCTGTGCCTTTCATGAGAAGCTATG-AGAAA 730
Query 820 CAATACATTGAGGCTTATGATGGTTTCAAGGTACTCA-GGCTTCCTTATCGACAAGGCCG 878
|||| ||| |||||||||||||||||||| || || | | ||||||||||||||||| ||
Sbjct 731 CAATTCATAGAGGCTTATGATGGTTTCAAAGTCCT-ACGCCTTCCTTATCGACAAGGACG 789
Query 879 TGACGATACCAACCGCAACTTCTCAATGTATTTCTATCTCCCTGACAAGAAAGG-GCAAT 937
||| |||||||||||| | || || |||||| |||||||||||||||||||||| | ||
Sbjct 790 TGATGATACCAACCGCGAGTTTTCGATGTATCTCTATCTCCCTGACAAGAAAGGTG-AAC 848
Query 938 TGGATAAACTGTTGGGGAGAATGACATCTACTTCTGGATTCTTGGATAGTCATATTCCGG 997
||||||| || |||| |||||| ||||||| | |||||||||||||||||||||||||||
Sbjct 849 TGGATAATCTTTTGGAGAGAATAACATCTAATCCTGGATTCTTGGATAGTCATATTCCGG 908
Query 998 AAGACAAAGTTAAAGTTGGTAAATTCAGAATTCCAAAGTTTAAGATCGAATTTGGGTTTG 1057
|| || ||| | |||||| | |||||||||||||| |||||||||||||| |||||||
Sbjct 909 AATACCGCGTTGATGTTGGTGATTTCAGAATTCCAAAATTTAAGATCGAATTCGGGTTTG 968
Query 1058 AAGCTTCAAGTGTTTTCAGTGACTTTGAGCTTGATGTGTCATTGTACCAAAAAGCTTTGA 1117
|||||||||||||||| | ||||||||||||| |||||||||| |||| ||||||||||
Sbjct 969 AAGCTTCAAGTGTTTTTAATGACTTTGAGCTTAATGTGTCATTACACCAGAAAGCTTTGA 1028
Query 1118 TTGAGATCGATGAAGAAGGTACTGAAGCTGCTGCTG-TAGC-AGCTTTTGTTCG-ATGCA 1174
||||||||||||||||||||||||||||||| |||| || | | || |||| | | | |
Sbjct 1029 TTGAGATCGATGAAGAAGGTACTGAAGCTGCGGCTGCTA-CTA-CTGTTGTA-GTA-GTA 1084
Query 1175 AA-GGCTGCCGTTT-TGTGA----A-GAC-AT--TAGATTTTGTAGCAGATCATCCGTTT 1224
| ||| || |||| || || | || | |||||||||| ||||||||||| |||
Sbjct 1085 ACCGGCAGCTGTTTGTGGGAGCCGAAGAAGAAGATAGATTTTGTGGCAGATCATCCATTT 1144
Query 1225 GT-TTTCTTGATTAGAGAAAACCAAACCGGAACTGTTTTGTTCGCTGGCCAAATCCTT-G 1282
| ||| |||||||||||| || ||||||||||| ||||||||||||| |||||| || |
Sbjct 1145 CTCTTT-TTGATTAGAGAAGACAAAACCGGAACTCTTTTGTTCGCTGGTCAAATC-TTCG 1202
Query 1283 ATCCTTCTG 1291
|||||||||
Sbjct 1203 ATCCTTCTG 1211
> AT1G62160.1 | Symbols: | Serine protease inhibitor (SERPIN)
family protein | chr1:22972352-22973303 FORWARD LENGTH=663
Length=663
Score = 606 bits (328), Expect = 1e-172
Identities = 435/485 (90%), Gaps = 13/485 (3%)
Strand=Plus/Plus
Query 820 CAATACATTGAGGCTTATGATGGTTTCAAGGTACTCAGGCTTCCTTATCGACAAGGCCGT 879
|||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 184 CAATACATTGCGGCTTATGATGGTTTTAAGGTACTCAGACTTCCTTATCGACAAGGCCGT 243
Query 880 GACGATACCAACCGCAACTTCTCAATGTATTTCTATCTCCCTGACAAGAAAGG-GCAATT 938
||| |||||||||||||||||||||||||||||||||| || ||||||||||| | ||||
Sbjct 244 GACAATACCAACCGCAACTTCTCAATGTATTTCTATCTACCGGACAAGAAAGGTG-AATT 302
Query 939 GGATAAACTGTTGGGGAGAATGACATCTACTTCTGGATTCTTGGATAGTCATATTCCGGA 998
|||| | || || |||||||||||||||| ||||||||||||||||||| | ||| ||
Sbjct 303 GGATGATCTTTTAAAGAGAATGACATCTACTCCTGGATTCTTGGATAGTCACACTCC-GA 361
Query 999 -AGACAA-AGTTAAAGTTGGTAAATTCAGAATTCCAAAGTTTAAGATCGAATTTGGGTTT 1056
||| || |||| |||| | | ||||||||||||||||||||||||||||||||||||||
Sbjct 362 GAGA-AAGAGTTGAAGTCGATGAATTCAGAATTCCAAAGTTTAAGATCGAATTTGGGTTT 420
Query 1057 GAAGCTTCAAGTGTTTTCAGTGACTTTGAGCTTGATGTGTCATTGTACCAAAAAGCTTTG 1116
|||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 421 GAAGCTTCAAGTGTTTTCAGTGACTTTGAGATTGATGTGTCATTTTACCAAAAAGCTTTG 480
Query 1117 ATTGAGATCGATGAAGAAGGTACTGAAGCTGCTGCTGTAGCAGCTTTTGTT--CGATGCA 1174
||||||||||||||||||||||||||||||||||||| | | ||||||||| | | | |
Sbjct 481 ATTGAGATCGATGAAGAAGGTACTGAAGCTGCTGCTGCAACTGCTTTTGTTGACAACG-A 539
Query 1175 A-A-GGCTGCCGTTTTGTGAAGACATTAGATTTTGTAGCAGATCATCCGTTTGTTTTCTT 1232
| | |||||| |||||||| |||| |||||||| || ||||||||||| ||| |||||||
Sbjct 540 AGATGGCTGCGGTTTTGTGGAGACGTTAGATTTCGTGGCAGATCATCCATTTCTTTTCTT 599
Query 1233 GATTAGAGAA-AACCAAACCGGAACTGTTTTGTTCGCTGGCCAAATCCTTGATCCTTCTG 1291
|||||||||| ||| ||||||||||||||||||| ||||| |||||| ||||||||||||
Sbjct 600 GATTAGAGAAGAAC-AAACCGGAACTGTTTTGTTTGCTGGTCAAATCTTTGATCCTTCTG 658
Query 1292 TTTAG 1296
||||
Sbjct 659 CTTAG 663
> AT1G65385.1 | Symbols: | pseudogene, putative serpin, blastp
match of 51% identity and 9.6e-61 P-value to GP|26224736|gb|AAN76362.1||AY158152
serpin-like protein {Citrus x paradisi}
| chr1:24289658-24291024 REVERSE LENGTH=1367
Length=1367
Score = 337 bits (182), Expect = 2e-91
Identities = 467/597 (78%), Gaps = 50/597 (8%)
Strand=Plus/Plus
Query 580 AAGGCCGAAGAAGTGCTTATGGAGGTGAATGCGTGGGCATCAAG-TCACACAAATGGTCT 638
||||| |||||||||| || |||||||||| | |||| | ||| |||||| ||| |||
Sbjct 631 AAGGCTGAAGAAGTGCGTAAGGAGGTGAATTCATGGG-TTGAAGATCACACCAATAATCT 689
Query 639 CATCAAAGATCTTCTTCCTCGTGGATCAGTTACAAGCCTAACCAACCGGATTTATGGAAG 698
||||||||||||||||||||||| ||| || ||||||| ||||||| |||||| | ||
Sbjct 690 CATCAAAGATCTTCTTCCTCGTGAATCTGTGACAAGCCGAACCAACAAGATTTACGCAAA 749
Query 699 CACATTGTACTTCAAAGGAGCCTGGCAAGACGA--ATTCCACAAGT-CAATGAC--GAGA 753
| ||||||| ||||| ||||| ||| |||| || ||| | |||| | || || |||
Sbjct 750 CGCATTGTATTTCAAGGGAGCTTGG-AAGA-GACCATTTGAAAAGTACTAT-ACAAAAGA 806
Query 754 CACAAACCTTTTTACCTTCTCAATGGAACAT-CAGTGTCTGTGCCATTCATGAGTAGCT- 811
|| | | | || || | ||||||| || | |||| |||||||||||||||| ||||
Sbjct 807 CAGAGA-C-TTCCACATGGTCAATGGCAC-TACAGTCTCTGTGCCATTCATGACCAGCTA 863
Query 812 CTGAAGAC-CAATACATTGAG-GCTTATGATGGTTTCAAGGTACTCAGGCTTCCTTATCG 869
| | |||| ||| | | | || |||||| | |||||| | ||| |||||| ||
Sbjct 864 C-G-AGACACAA-AAAGTAAGAGCTTATAACGGTTTC-----A---AGG--TCCTTACCG 910
Query 870 ACAAGGCCGTGACGATACCAACCGCAACTTCTCAATGTATTTCTATCTCCCTGACAAGAA 929
|| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 911 ACGAGGCCGTGATGATACCAACCGCAAATTCTCAATGTATTTCTATCTCCCTGACAAGAA 970
Query 930 AG--GGCAATTGGATAAACTGTTGGGGAGAAT-GACATCTACTTCTGGATTCTTGGATAG 986
|| || | |||||| | || ||| || ||| | ||||||| ||||||||||||||||
Sbjct 971 AGATGG-A-TTGGATTATCTCTTGAAGAAAATAG-CATCTACACCTGGATTCTTGGATAG 1027
Query 987 TCATATTCCG-GAAGACAAAGTTAAAGTTG-GTAAATTCAGAATTCCAAAGTTTAAGATC 1044
||| |||||| || |||||||| || ||| | || || |||||||||||||||||||||
Sbjct 1028 TCACATTCCGAGAT-ACAAAGTTGAACTTGAGGAATTT-AGAATTCCAAAGTTTAAGATC 1085
Query 1045 GAATTTGGGTTTGAAGCTTCAAGTGTTTTCAGTGACTTTG-AG--CTTG-AT---GTGTC 1097
||||| || ||| ||| |||| ||||| | | | | | || || | || |||||
Sbjct 1086 GAATTCGGTTTTTCTGCTACAAGCGTTTTGAATCAAGTGGGAGTACT-GCATTCAGTGTC 1144
Query 1098 ATTGTACCAAAAAGCTT-TGATTGAGATCGATGAAGAAGGTACTGAAGCTGCTGCTG 1153
| ||||||| ||||||| || | |||||||||||||||||| |||||||||| ||||
Sbjct 1145 AATGTACCATAAAGCTTGTG-TCGAGATCGATGAAGAAGGTGCTGAAGCTGCGGCTG 1200
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 63754692150
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5