BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg475136 Length=1405 Score E Sequences producing significant alignments: (Bits) Value AT1G61990.1 | Symbols: | Mitochondrial transcription terminati... 1853 0.0 AT1G62120.1 | Symbols: | Mitochondrial transcription terminati... 760 0.0 AT1G61970.1 | Symbols: | Mitochondrial transcription terminati... 728 0.0 AT1G61980.1 | Symbols: | Mitochondrial transcription terminati... 713 0.0 AT1G62110.1 | Symbols: | Mitochondrial transcription terminati... 634 0.0 AT1G62085.1 | Symbols: | Mitochondrial transcription terminati... 532 3e-150 AT1G61960.1 | Symbols: | Mitochondrial transcription terminati... 514 9e-145 AT1G62150.1 | Symbols: | Mitochondrial transcription terminati... 477 1e-133 AT1G62055.1 | Symbols: | pseudogene, hypothetical protein | ch... 267 3e-70 AT1G62490.1 | Symbols: | Mitochondrial transcription terminati... 244 1e-63 > AT1G61990.1 | Symbols: | Mitochondrial transcription termination factor family protein | chr1:22911205-22912935 FORWARD LENGTH=1731 Length=1731 Score = 1853 bits (1003), Expect = 0.0 Identities = 1289/1422 (91%), Gaps = 39/1422 (3%) Strand=Plus/Plus Query 1 AGTTGGGTCGGACTAGCTTTCAACATTGTAGCATTTGTTGCATTGATTTGTCCTTTGTCA 60 |||||||||||| |||||||||||| |||||||||||| || | ||||| ||||| | Sbjct 195 AGTTGGGTCGGAATAGCTTTCAACACTGTAGCATTTGTAGC----A-TTGTCTTTTGTAA 249 Query 61 TGTATTCTCTGATTCTCCATGGAAGAAGGTTGGTCGAATTGCATAAATGGCGCCA-TTTG 119 ||||||||||||||||||||||||||||||||||| ||| ||| |||| || | |||| Sbjct 250 TGTATTCTCTGATTCTCCATGGAAGAAGGTTGGTCCAATCGCAGAAAT-GCTTGAGTTTG 308 Query 120 AGAT-TTGCTCTGCAAAATGCATCTCCTTTGTCCAATTCCTTCTCTTCTGCT-GCTGCTG 177 || | || | |||||||||||| | ||||||||||||||||||||||||| | |||| Sbjct 309 AG-TGTTTCAGTGCAAAATGCATTTGTTTTGTCCAATTCCTTCTCTTCTGCTAG-AGCTG 366 Query 178 CTGATGTGAGGTCA--AGAGATGGTCGAAAAGGAAAGAACTTTACGGTCTCTTACCTCGT 235 ||||||||| | || ||||||||||||||||| ||||||||||| |||||||||||||| Sbjct 367 CTGATGTGA-G-CATTAGAGATGGTCGAAAAGGGAAGAACTTTACAGTCTCTTACCTCGT 424 Query 236 TGATTCATTGGGTTTCA-CTACAAAGCTCGCTGAATCGATCTCAAGGAAAGTTCA--TTT 292 ||||||||||||||| | ||| ||||||||||||||| ||||||||||||||| | ||| Sbjct 425 TGATTCATTGGGTTT-ATCTAAAAAGCTCGCTGAATCCATCTCAAGGAAAGTT-AGCTTT 482 Query 293 CACCGACAAGG-CAAATCCGGATTCTGTTCTGAGTCT-TTTGAGAAGTCATGGCTTCATA 350 | ||||||| | ||||| ||||||||||| ||||| ||| |||||| | || |||| | Sbjct 483 GA-GGACAAGGTC-AATCCTGATTCTGTTCTAAGTCTGTTT-AGAAGTTACGGGTTCACA 539 Query 351 GATTCTCAGATCTCCT-GCATCATTACCGATTATCCAG-AATTGCTTATA-CTAGATGCT 407 ||||||||||||| || ||||||||| |||||||| | ||||||| || | ||||||| Sbjct 540 GATTCTCAGATCT-CTACCATCATTACGGATTATCC-GTTATTGCTTGTAGC-AGATGCT 596 Query 408 GAGAAATCACTTGGTCGCAAGCTTCAGATTCTGCAGTCTAGAGGAGCTTCAAGCTCTGA- 466 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 597 AAGAAAGCACTTGGTCGCAAGCTTCAGATTCTGCAGTCTAGAGGAGCTTCAAGCTCTGAG 656 Query 467 ACTCACTGAGATTGTTTCTACAGTTCCCAGAATCTTAGGAAGGAAATCTATCACTGTATA 526 | |||||||||||||||||||||| || ||||||||||||| ||||||||| |||||||| Sbjct 657 A-TCACTGAGATTGTTTCTACAGTACCGAGAATCTTAGGAAAGAAATCTATTACTGTATA 715 Query 527 CTATGATGCTGTCAAAGAAATTATAGTAGCCGATAAGAGTTCGAGTTATGAACTCCCACG 586 |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct 716 CTATGATGCTGTCAAAGACATTATAGTAGCCGATACGAGTTCGAGTTATGAACTCCCACA 775 Query 587 GGGTTCTCAGGGGAATAAAATCCGAAATGTATCTGTTTTGAGACAATTGGGCATGCC-TC 645 ||||||||||||||||||||||||||||||||| | ||||||| |||| |||||||| || Sbjct 776 GGGTTCTCAGGGGAATAAAATCCGAAATGTATCGGCTTTGAGAGAATTAGGCATGCCTTC 835 Query 646 AGT-GGTTGTTATTACCCTTGCTTGTCTCCAAATCGCAGCCTGTGTGTGGGAAAGAAAAT 704 | ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct 836 --TCGGTTGTTATTACCCTTGCTCGTCTCCAAATCGCAGCCTGTGTGTGGAAAAGAAAAT 893 Query 705 TTTGAAGAATCCCTCAAGAAGGTTGTTGAGATGGGTTTTGATCCCACCACTTC-AAAGTT 763 ||||| | |||||| |||||||||||||||||||| |||||||||||||| | ||| || Sbjct 894 TTTGATGCATCCCTTAAGAAGGTTGTTGAGATGGGGTTTGATCCCACCACCACTAAA-TT 952 Query 764 TGTTGTAGCTTTGCGCATGCTTTACCAAATGAGCGAGAAAACGATTGAAGAAAAAGTTGT 823 |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 953 TGTTTTAGCTTTGCGGATGCTTTACCAAATGAGCGAGAAAACGATTGAAGAAAAAGTTGT 1012 Query 824 AGTCTATACAAGTGTAGGTTTTACTCTGGATGATGTATGGGAAATTTTCAAGAAGACTCC 883 ||||| || |||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1013 AGTCTTTAGAAGTTTAGGTTTTACTGTGGATGATGTATGGGAAATTTTCAAGAAGACTCC 1072 Query 884 TTCCGTTTTGAAAGTCTCCAAGAAGAAGATATTGAAGTCTGCTGAAACATTTCTAGCCCT 943 ||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||| Sbjct 1073 TTCTGTTTTGAAAGTCTCCAAGAAGAAGATATTGAAGTCGGCTGAAACGTTTCTAGACCT 1132 Query 944 AGGATATAGCAGAGCTGAGTTTTTGATGATGGTCAAGCGTTATCCTCCTTGCATTGAATA 1003 |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct 1133 AGGATATAGCAGAGCTGAGTTTCTGATGATGGTTAAGCGTTATCCTCCTTGCATTGAATA 1192 Query 1004 TTCTCTAGAGTCGGTTAAAAGGAAGAATGAGTTTCTGGTGAAGAAGATGAATTGGCCACT 1063 |||| ||||||| ||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct 1193 TTCTGTAGAGTCTGTTAAAAAGAAGAATGAGTTTCTGGTGAAGAAGATGAAATGGCCACG 1252 Query 1064 AAATGCCTTGGTTTTGCACCCTCAGGTGTTTGGATACAGCATGGAGAAGAGGATTATACC 1123 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1253 AAACGCCTTGGTTTTGCACCCTCAGGTGTTTGGATACAGCATGGAGAAGAGGATTATACC 1312 Query 1124 AAGGTGTAACGTACTCAAAGTTCTCTTGTCGAAAGGACTGCTCAGAAAGAAAAGCGAACT 1183 |||||||||| ||||| ||| |||||||||||||||||||||||||||| ||| ||||| Sbjct 1313 AAGGTGTAACATACTCGAAGCTCTCTTGTCGAAAGGACTGCTCAGAAAGGGAAGTGAACT 1372 Query 1184 ACCTGCCGTGTCCTCTGTTTTGTCGTGTACCGATGAAGGATTTTTAAATAGGTATGTGAT 1243 |||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct 1373 ACCTGCAGTGTCCTCTGTTTTGTCGTGTACCGATGAAGGATTTTTAGACAGGTATGTGAT 1432 Query 1244 GAAGCACAACGAGCTGGCGCCTACGTTGATGGCTATCTTCACCAAAGGTCGTGTTTCATA 1303 ||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||| Sbjct 1433 GAAGCACAACGAGCTGGTGCCTACGTTGATGGCTATATTCACCAAAGGTAGTGTTTCATA 1492 Query 1304 GATCAAAAGGCACACCTACAACAATGAGCAATGCCAAGGTTTGTTCTTATTTTGTTGTTG 1363 ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1493 GATCAGAAGGCACACCTACAACAATGAGCAGTGCCAAGGTTTGTTCTTATTTTGTTGTTG 1552 Query 1364 TCAGTTTTAGATCTGTCGATGGATCTTTTGATATGACAATGG 1405 |||||||||||| | | |||| ||||| |||| ||| ||||| Sbjct 1553 TCAGTTTTAGATTTCTAGATGAATCTTATGATGTGATAATGG 1594 > AT1G62120.1 | Symbols: | Mitochondrial transcription termination factor family protein | chr1:22960191-22961779 REVERSE LENGTH=1589 Length=1589 Score = 760 bits (411), Expect = 0.0 Identities = 1101/1414 (78%), Gaps = 128/1414 (9%) Strand=Plus/Plus Query 48 TTGTCCTTTGTCATGTATTCTCTGATTCTCCATGGAAGAAGGTTGGTCGAATTGCATAAA 107 |||| |||||| |||||||||||||||||||||||||||| ||||||| | ||||| ||| Sbjct 130 TTGT-CTTTGTAATGTATTCTCTGATTCTCCATGGAAGAAAGTTGGTCCAGTTGCAGAAA 188 Query 108 TGGCGCCATTTGA--GATT---TG---C-TCTGCAAAATGCATCTCCTTTGTCCAATTCC 158 ||||||||||||| | || || | | | ||||||| ||| |||| |||||| || Sbjct 189 TGGCGCCATTTGAGGGTTTCAGTGAATCTTTTTCAAAATGGATCAGCTTTTTCCAATACC 248 Query 159 TTCT-CT--TCTGCTGCTGCTGCTGATGTGAGGTCAAGAGATGGTCGAAAAGGAAAGAAC 215 |||| || |||||| ||||||||||||||| |||||||||||||||||||| | ||| Sbjct 249 TTCTCCTCCTCTGCTATTGCTGCTGATGTGAGCTCAAGAGATGGTCGAAAAGGTCACAAC 308 Query 216 TTTACGGTCTCTTACCTCGTTGATTCATTGGGTTTCA-CTACAAA-GCTCGCTGAATCGA 273 ||||| || |||||||||||||||||||| ||||| | ||||||| | |||||||||||| Sbjct 309 TTTACAGTTTCTTACCTCGTTGATTCATTAGGTTT-AGCTACAAAAG-TCGCTGAATCGA 366 Query 274 TCTCAAGGAAAGTTCA-TTTC-ACCGACAAGG-CAAATCCGGATTCTGTTCTGAGTCTTT 330 |||| | |||||| || |||| | |||||| ||| || ||||||||||||||||||| Sbjct 367 TCTCCATGAAAGT-CAGTTTCGATA-ACAAGGGCAAC-CCTGATTCTGTTCTGAGTCTTT 423 Query 331 TGAGAAGTCATGGCTTCA-TAGATTCTCAGATCTCCTGCATCATTACCGA-TTATCC-A- 386 ||||||||||||| |||| | ||||||||||||||| |||||||| || || ||| | Sbjct 424 TGAGAAGTCATGGGTTCACT-GATTCTCAGATCTCCAACATCATTAG-GACTT-TCCCAA 480 Query 387 GAATTGCTTATACTAGATGCTGAGAAATCACTTGGTCGCAAGCTTCAGATTCTGCAGTCT 446 || |||||||| ||||||||||||||||| |||| || |||||||||| |||||||||| Sbjct 481 GA-TTGCTTATCCTAGATGCTGAGAAATCCCTTGCTCCCAAGCTTCAGTTTCTGCAGTCC 539 Query 447 AGAGGAGCTTCAAGCTCTGAACTCACTGAGATTGTTTCTACAGTTCCCAGAATCTT---- 502 | ||| |||||||||||||| ||||| |||| ||||||| ||||||| | ||| || Sbjct 540 ATAGGTGCTTCAAGCTCTGAGCTCACCGAGACTGTTTCTGCAGTTCCGAAAATATTGGGG 599 Query 503 A-G-GAA-GG--AAATCTATCA-CTGTATACTATGATG-CTGTCAAAGAAATTATAGTAG 555 | | ||| || |||||| ||| | | |||||||||| | ||||||| ||||||| || Sbjct 600 AAGAGAAAGGGCAAATCTCTCAGCAG-ATACTATGATTTC-GTCAAAGTCATTATAGAAG 657 Query 556 CCGATAAGAGTTC---G--AG-----TTATGA-ACTC----CCACG-GGGTTCTCAG--G 597 | ||||||||||| | || ||||| | || ||| | |||| | || | Sbjct 658 CGGATAAGAGTTCCAAGTTAGAAAAGTTATGTCATTCTTTGCCA-GAGGGTAGTAAGCAG 716 Query 598 G-GAATAAAATCCGAAATGTATCTGTT-TTGAGACAATTGGGCATGCCTCAGTGGTTGTT 655 | ||| |||||| ||||| ||| || | |||||| || |||| |||||||| ||||||| Sbjct 717 GAGAACAAAATCAGAAATTTAT-TGGTGTTGAGAGAAATGGGTGTGCCTCAGAGGTTGTT 775 Query 656 ATTACCC-TTGCTTGTCTCCAAAT-C-GCAGCCTGTGTGTGGGAAAGAAAATTTTGAAGA 712 ||| | | |||||| | ||| | | | | || ||| ||||| |||||||| ||| |||| Sbjct 776 ATT-CTCATTGCTTATATCCGA-TGCCGGAGA-TGTTTGTGGTAAAGAAAAATTTAAAGA 832 Query 713 ATCCCTCAAGAAGGTTGTTGAGATGGGTTTTGATCCCACCACTTCAAAGTTTGTTGTAGC 772 ||| |||||||||| ||||||||| ||||||||||| ||||| ||| ||||| ||| Sbjct 833 ATCACTCAAGAAGGCTGTTGAGATTGGTTTTGATCCAACCACCGCAACTTTTGTCAAAGC 892 Query 773 T-TTG-CGCATGCTTTACCAAATGAGCGAGAAAACGA-TTGAAGAA-AAAGTTGTA-GTC 827 | || || | |||||| | | ||||| ||| || ||||| || ||| || | | | Sbjct 893 TCTTAACGT-T-CTTTACGGATTAAGCGACAAAG-GAATTGAA-AATAAA-TTCAATGCC 947 Query 828 TATACAAGTGT-AGGTTTTACTCTGGATGATGTATGGGAAATTTTCAAGAAGACTCCTTC 886 | || ||| || ||| || || |||| |||||||||| ||| ||||||||| || Sbjct 948 TGTAAAAG-GTTAGGCTTGGCTGTGGACGATGTATGGGCAATGTTCAAGAAGTGGCCAAA 1006 Query 887 CGTTTTGA-AA-GTCTCCAAGAAGAAGATATTGAAGTCTGCTGAAACATTTCTAGCCCTA 944 | || ||| || |||| | |||||||||| ||| || | |||||||||||||| |||| Sbjct 1007 CATTCTGACAAAGTCTG-A-GAAGAAGATAGAGAACTCCGTTGAAACATTTCTAGGCCTA 1064 Query 945 GGATAT-AGCAGAGCTGAGTTTTTGATGATGGTCAAGCGTTATCC-TCCTTGCATTGAAT 1002 |||| | ||||||| |||||||||||||||||||||||| | ||| || ||||||| || Sbjct 1065 GGAT-TCAGCAGAGATGAGTTTTTGATGATGGTCAAGCGAT-TCCCTCAGTGCATTGGAT 1122 Query 1003 ATTCT-CTAGAGTCGGTTAAAAGGAAGAATGAGTTTCTGGTGAAGAAGATGAATTGGCCA 1061 ||||| | ||||| | | || | ||||| |||||||||||||| | |||||||||||||| Sbjct 1123 ATTCTAC-AGAGTTGATGAAGACGAAGACTGAGTTTCTGGTGACGGAGATGAATTGGCCA 1181 Query 1062 CTAAATGCCT-TGGTTTTGCA--CCCTCAGGTGTTTGGATACAGCATGGAGAAGAGGATT 1118 ||||| || | ||| || || ||||||||| | ||||||||| | |||||||||| | Sbjct 1182 CTAAAGGC-TGTGGCTT--CAATCCCTCAGGTACTCGGATACAGCCTAGAGAAGAGGACT 1238 Query 1119 ATACCAAGGTGTAACGT-ACTCAAAGTTCTCTTGTCGAAAGGACTGCTCAGAAAGAAAAG 1177 | ||||||||||| || | ||||||||||| | || |||||| ||||| ||||| | Sbjct 1239 GTCCCAAGGTGTAATGTTA-TCAAAGTTCTCATCTCAAAAGGATTGCTC-GAAAGT---G 1293 Query 1178 CGAACTACCTGCCG-TGTCCTCTGTTTTGTCGTGTACC-GATGAAG-GATTTTTAAATAG 1234 |||| ||| || | |||||||||||| | ||||| | ||| | | |||||| ||| Sbjct 1294 --AACTCCCT-CCAATATCCTCTGTTTTGACAAGTACCAG-TGAGGTG-TTTTTATATAT 1348 Query 1235 GTATGTGATGAAGCAC-A--AC--G-AGCTGGCGCCT-ACGTTGATGGCTATCTTCACCA 1287 |||||| | ||| || | || | |||| | | || | ||||||||||||||||||| Sbjct 1349 GTATGTTAGGAAACATGATGACAAGCAGCTTGTGGCTGA-GTTGATGGCTATCTTCACCG 1407 Query 1288 AAGGTCGTGTTTCA-T-A--GATCAAAAGGCACACCTACAACAATGAGCAATGCCAAGGT 1343 || |||||||||| | | ||||| ||| ||| |||| |||||||||||| | ||||| Sbjct 1408 GAGATCGTGTTTCACTCACCGATCAGAAGACACGCCTAGAACAATGAGCAAAGTCAAGGA 1467 Query 1344 TTG-TTCTTATTTTGTTGT-TGTCAGTTTTAGAT 1375 | | || || ||||||| | ||| || ||||||| Sbjct 1468 TGGATTTTTTTTTTGTTTTCTGTTAGGTTTAGAT 1501 > AT1G61970.1 | Symbols: | Mitochondrial transcription termination factor family protein | chr1:22904486-22907630 FORWARD LENGTH=2848 Length=2848 Score = 728 bits (394), Expect = 0.0 Identities = 935/1183 (79%), Gaps = 90/1183 (8%) Strand=Plus/Plus Query 48 TTGTCCT-TTGTCATGTATTCTCTGATTCTCCATGGAAGAAGGTTGGT-CGAATTGCATA 105 ||| ||| ||||||||||| ||||||| |||||||||||||||||||| | | ||||| | Sbjct 216 TTG-CCTGTTGTCATGTATGCTCTGATACTCCATGGAAGAAGGTTGGTAC-AGTTGCAGA 273 Query 106 AATGGCGCCA-TTTGAGAT-TTGCTCTGCAAAATGCATCTCCTTTGTCCAATTCCTTCTC 163 ||||| | | ||| || | || | ||||||| ||||| ||| ||||||| |||||| Sbjct 274 AATGGTGTAACTTT-AG-TCTTTCAGTGCAAAAGGCATCACCTACATCCAATTTCTTCTC 331 Query 164 TTCTGCTGCTGCTGC-TGATGTGAGGT-CAAGAGATGGTCGAAAAGGAAAGAACTTTACG 221 |||||| ||||||| || | ||| || | |||| ||||||||||||||| |||||||| Sbjct 332 CTCTGCTTCTGCTGCGTG-TTTGA-GTCCTAGAGTTGGTCGAAAAGGAAACAACTTTACA 389 Query 222 GTCTCTTACCTCGTTGATTCATTGGGTTTCACTACAAAGCTCGCTGAATCGATCTCAAGG 281 ||||||||||| |||||||||||||| || || ||||| ||||||||||| || ||| || Sbjct 390 GTCTCTTACCTTGTTGATTCATTGGGCTTAACCACAAAACTCGCTGAATCCATTTCACGG 449 Query 282 AAAGTTCA-TTTC-ACCGACAAGGCA-AATCCGGATTCTGTTCTGAGTCTTTTGAGAAGT 338 || ||| | ||| | ||||| | | ||||| ||||||||||||| |||||||| |||| Sbjct 450 AAGGTT-AGCTTCGA-GGACAA-GAACAATCCTGATTCTGTTCTGAATCTTTTGACAAGT 506 Query 339 CATGGCTTCATAGATTCTCAGATCTCCTGCATCATTACCGATTATCCAGAATTGCTTATA 398 ||||| |||| || ||||||||||||| |||||||| ||||| ||| | ||||||||| Sbjct 507 CATGGGTTCACAGGTTCTCAGATCTCCACCATCATTAGGGATTACCCACAGTTGCTTATA 566 Query 399 -CTAGATGCTGAGAAATCACTTGGTCGCAAGCTTCAGATTCTGCAGTCTAGAGGAGCTTC 457 | ||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct 567 GC-AGATGCTGAGAAATCACTTGGTCCCAAGCTTCAGTTTTTGCAGTCTAGAGGAGCTTC 625 Query 458 AAGCTCTGAACTCACTGAGATTGTTTCTACAGTTCCCAGAA-TCTTAGGAA-G---G--- 509 |||||||||| ||||||||||||||||| ||||||| ||| | || |||| | | Sbjct 626 AAGCTCTGAAATCACTGAGATTGTTTCTTCAGTTCCG-GAAATATTGGGAAAGAAAGGGC 684 Query 510 A-AAT-CTATCA-CTGTATACTATGATG-CTGTCAAAGAAATTATAGTAGCC-GATAAGA 564 | || |||||| | |||||||||||| | ||||||| | | | | || || |||| Sbjct 685 ACAAAACTATCAGC-GTATACTATGATTTCA-TCAAAGACACT-T--T-GCTTGAGAAGA 738 Query 565 GTTC---GA--G-----TTATGA-ACTC----CCACGGGGTTCTCAGGGGAATAAAATCC 609 |||| || | ||||| | || |||| |||| || || ||| || ||| Sbjct 739 GTTCCAAGAACGAAAAGTTATGTCATTCTTTGCCACAGGGTAATCTGGAGAACAAGATCA 798 Query 610 GAAATGTATCTGTTTTGAGACAATTGGGCATGCCTCAGTGGTTGTTATTAC-CCTTGCTT 668 |||||||||| ||||| ||| ||||||| |||||||| ||||||||| | ||||||| Sbjct 799 GAAATGTATCGGTTTTAAGAGAATTGGGAATGCCTCACAAGTTGTTATT-CTCCTTGCTC 857 Query 669 GTCTCCAAATCGC-AGCCTGTGTGTGGGAAAGAAAATTTTGAAGAATCCCTCAAGAAGGT 727 ||||| | | || | ||||| ||||| |||||||| ||||||||| |||||||||| || Sbjct 858 ATCTCCGA-TAGCCAACCTGTATGTGGAAAAGAAAAATTTGAAGAAACCCTCAAGAAAGT 916 Query 728 TGTTGAGATGGGTTTTGATCCCACCACTTCAAAGTTTGTTGTAGCTTTGCGCA-TGCTTT 786 ||||||||||||||||||||| ||||| ||||||||||| | |||| | | | | ||| Sbjct 917 TGTTGAGATGGGTTTTGATCCTACCACCTCAAAGTTTGTCGAAGCTCTACA-AGTTATTT 975 Query 787 ACCAAATGAGCGAGAAAACGATTGAAGAAAAAGTTG-TAGTCTATACAAG-TGTAGGTTT 844 || |||||| ||||||||| || ||||||||||| | |||||| ||| | |||| || Sbjct 976 ACAAAATGAACGAGAAAACAATCGAAGAAAAAGTCCATC-TCTATAAAAGCT-TAGGCTT 1033 Query 845 T-ACTCTGG-ATGATGTATGGGAAA-TTTTCAAGAAGACTCCT-TC-CGTTTTGAAAGTC 899 | | | ||| | ||||||||| || |||| || ||| || || || | || ||| Sbjct 1034 TGA-TGTGGGA-GATGTATGGTCAAGTTTTAAA-AAGTGGCCAATCTCGCT--GAGAGTA 1088 Query 900 TCCAAGAAGAAGATATTGAAGTCTGCTGAAACATTTCTAGCCCTAGGATAT-AGCAGAGC 958 || |||||||||| ||| | || |||||||||||| | |||||||| | ||||||| Sbjct 1089 TCGGAGAAGAAGATGTTGGACTCCATTGAAACATTTCTTGGCCTAGGAT-TCAGCAGAGA 1147 Query 959 TGAGTTTTTGATGATGGTCAAGCG-TTATCCTCCTTGCATTGAAT-ATTCT-CTAGAGTC 1015 ||||||| | ||||||||||| || |||||| ||||||| || || || | |||| | Sbjct 1148 TGAGTTTGCCAAGATGGTCAAGCACTT-TCCTCCGTGCATTGGATTAT-CTAC-AGAGAC 1204 Query 1016 GGTTAAAAGGAAGAA-TGAGTTTCTGGTGAAGAAGATGAATTGGCCACTAAATGCC-TTG 1073 ||| |||| ||| || |||||||||||||||||||||||||||||||||||| || ||| Sbjct 1205 GGTCAAAAAGAA-AACTGAGTTTCTGGTGAAGAAGATGAATTGGCCACTAAAGGCTGTTG 1263 Query 1074 GTTTTGCACCCT-CAGGTGTTTGGATACAGCATGGAGAAGAGGATTATACCAAGGTGTAA 1132 ||| ||||| | ||| |||||||| ||| |||||||||||||| | |||||| |||| Sbjct 1264 -TTTCAAACCCTGC-GGTATTTGGATATAGCCTGGAGAAGAGGATTGTTCCAAGGGGTAA 1321 Query 1133 CGTACTCAAAGTTCTCTTGTCGAAAGGACTGCTCAGAAA-GAA 1174 |||| |||||| |||| |||| |||||| || | ||||| ||| Sbjct 1322 CGTAATCAAAGCTCTCATGTCCAAAGGATTGATGAGAAATGAA 1364 > AT1G61980.1 | Symbols: | Mitochondrial transcription termination factor family protein | chr1:22908045-22909588 FORWARD LENGTH=1544 Length=1544 Score = 713 bits (386), Expect = 0.0 Identities = 933/1182 (79%), Gaps = 97/1182 (8%) Strand=Plus/Plus Query 48 TTGTCCTT-TGTCATGTATTCTCTGATTCTCCATGGAAGAAGGTTGGTCGAATTGCATAA 106 |||| ||| |||||||||||||||||||| |||||||||||| |||||||| || || || Sbjct 106 TTGT-CTTCTGTCATGTATTCTCTGATTCGCCATGGAAGAAGTTTGGTCGAGTTACAGAA 164 Query 107 ATGGCGCCATTTGAGA-TTTGCT-CTGCAAAATGCATCTCCTTTGTCCAATTCCTTCTCT 164 |||||| ||||||||| ||| | ||||||| || ||||||||||||||||||||||| Sbjct 165 ATGGCGTCATTTGAGAGTTT--TAGTGCAAAAGGCGTCTCCTTTGTCCAATTCCTTCTCC 222 Query 165 TCTGCTGCTGCTGCTG-ATGTGAGGT-CAAGAGATGGTCGAAAAGGAAAGAACTTTACGG 222 |||||| ||||||| | | ||| || | |||| |||||||||||| |||| |||||| | Sbjct 223 TCTGCTTCTGCTGC-GCGTTTGA-GTCCTAGAGTTGGTCGAAAAGGTAAGAGCTTTACAG 280 Query 223 TCTCTTACCTCGTTGATTCATTGGGTTT-CACTACAAAGCTCGCTGAATCGATCTCAAGG 281 |||||||||||||||||||||||||||| | | | |||||||||||||||| |||||||| Sbjct 281 TCTCTTACCTCGTTGATTCATTGGGTTTACCCAA-AAAGCTCGCTGAATCGGTCTCAAGG 339 Query 282 AAAGTTCAT-TTC-ACCGACAAGG-CAAATCCGGATTCTGTTCTGAGTCTTTTGAGAAGT 338 || ||| | ||| | ||||||| ||| || || |||||||||| ||||||||||||| Sbjct 340 AAGGTT-AGCTTCGAG-GACAAGGACAAC-CCTGACTCTGTTCTGAATCTTTTGAGAAGT 396 Query 339 CATGGCTTCA-TAGATTCTCAGATCTCCTGCATCATTACCGATTATCCAGAATTGCTTAT 397 ||||| |||| | ||||||||||||||| |||| |||| ||||||||| |||||||| | Sbjct 397 CATGGGTTCACT-GATTCTCAGATCTCCACCATCGTTACGGATTATCCACAATTGCTTGT 455 Query 398 A-CTAGATGCTGAGAAATCACTTGGTCGCAAGCTTCAGATTCTGCAGTCTAGAGGAGCTT 456 | || ||||||||||||||||||| || |||||||||| || |||||||||||||||||| Sbjct 456 AGCT-GATGCTGAGAAATCACTTGCTCCCAAGCTTCAGTTTTTGCAGTCTAGAGGAGCTT 514 Query 457 CAAGCTCTGAACTCACTGAGATTGTTTCTACAGTTCCCAGAATCTTAGGAA-G-GA---- 510 |||||||||| |||||||||||||||||||||||||| | |||||| |||| | || Sbjct 515 CAAGCTCTGAGCTCACTGAGATTGTTTCTACAGTTCCTAAAATCTTGGGAAAGAGAGGCC 574 Query 511 A-AT--CTATCA-CTGTATACTATGATG-CTGTCAAAGAAA-TT-A-TAG-TA-GCCGAT 560 | | |||||| | |||| ||||||| | ||||||||| || | | | || | | | Sbjct 575 ACAAAACTATCAGC-GTATTCTATGATTTCA-TCAAAGAAACTTTACTTGATAAGA-GTT 631 Query 561 A-AGAGTTCGA---GTTATG--AAC-TC--CCACGGGGTTCTCAGGGGAATAAAATCCGA 611 | ||| ||| || ||| ||| | |||| |||| || || ||| || ||| || Sbjct 632 CCA-AGTCCGAAAAGTCATGTCAACCTTTTCCACAGGGTAATCTGGAGAACAAGATCAGA 690 Query 612 AATGTATCTGTTTTGAGACAATTGGGCATGCCTCAGTGGTTGTTATTACCCTTGCTTGTC 671 ||| |||||||||||||| ||||||| |||||||| ||||||||| |||||||| || Sbjct 691 AATTTATCTGTTTTGAGAGAATTGGGGATGCCTCACAAGTTGTTATTCCCCTTGCTCATC 750 Query 672 TCCAA--ATCGCAGCCTGTGTGTGGG-AAAGAAAATTTTGAAGAATCCCTCAAGAAGGTT 728 || | || | ||||| | | || |||||||| |||||||||||||||||||| ||| Sbjct 751 TCTTGTGA-CGTA-CCTGTCT-TCGGTAAAGAAAAATTTGAAGAATCCCTCAAGAAAGTT 807 Query 729 GTTGAGATGGGTTTTGATCCCA-CCACTTCAAAGTTTGTTGTAGCTTTGCGCAT-GCTTT 786 |||||||||||||||||||| | |||| ||||||||||| | ||||||| || | | || Sbjct 808 GTTGAGATGGGTTTTGATCC-ATCCACCTCAAAGTTTGTGGAAGCTTTGTGCGTTG-TTC 865 Query 787 ACCAA-AT-GAGCGAGAAAA-CGATTGAAGAAAAAGTTG-TAGTC-TATACAAGTGT-AG 840 | || || |||||| |||| | || ||||| ||||| | | | |||| ||| || || Sbjct 866 A--AAGATTGAGCGACAAAAAC-ATAGAAGATAAAGTCAAT-G-CGTATAAAAG-GTTAG 919 Query 841 GTTTT-ACTCTGGA-TGATGTATGGGAAATT-TTCAAGAAGACTCCTTCCGTTT-TGAAA 896 | ||| | | |||| | |||||||| | | | ||||||| | || | ||| ||| | Sbjct 920 GCTTTGA-TGTGGAAT-ATGTATGG-ACAGTGTTCAAGAGGTGGCCAAAC-TTTCTGACA 975 Query 897 GTCTCCAAGAAGAAGATATTGAAGTCTGCTGAAACATTTCTAGCCCTAGGATAT-AGCAG 955 ||| |||||||||||||||| | |||||||||||||| |||||| | | ||||| Sbjct 976 CACTCGGAGAAGAAGATATTGAACACCATTGAAACATTTCTAGGCCTAGGGT-TCAGCAG 1034 Query 956 AGCTGAGTTTTT-GATGATGGTCAAGCG-TTATCCTCCTTGCATTGAAT-ATTCTCT-AG 1011 || ||||||| | || | | ||||| || ||||| |||||| || || | | || Sbjct 1035 AGATGAGTTTAGCG-TGTTAATTAAGCGCTT-TCCTCAGGGCATTGGATTATCCGCGGAG 1092 Query 1012 AGTCGGTTAAAAGGAAGAATGAGTTTCTGGTGAAGAAGATGAATTGGCCACTAAATGC-C 1070 | | |||||||| ||||| ||||||| |||| ||||||||||||||||||||||| || | Sbjct 1093 A-T-GGTTAAAAAGAAGACTGAGTTTTTGGTAAAGAAGATGAATTGGCCACTAAAGGCTC 1150 Query 1071 TTGGTTTTGCACCCT-CAGGTGTTTGGATACAGCATGGAGAAGAGGATTATACCAAGGTG 1129 ||| ||| ||||| | |||| ||||||||||| | |||||||||| | | |||||| | Sbjct 1151 TTG-TTTCAAACCCTGC-GGTGCTTGGATACAGCCTAGAGAAGAGGACTGTCCCAAGGGG 1208 Query 1130 TAACGTACT-CAAAGTTCTCTTGTCGAAAGGACTGCTCAGAA 1170 ||||||| | ||| | |||| | || || ||| || || ||| Sbjct 1209 TAACGTAGTTCAA-GCTCTCATCTCCAAGGGATTGATCGGAA 1249 > AT1G62110.1 | Symbols: | Mitochondrial transcription termination factor family protein | chr1:22957876-22959711 REVERSE LENGTH=1836 Length=1836 Score = 634 bits (343), Expect = 0.0 Identities = 734/911 (81%), Gaps = 73/911 (8%) Strand=Plus/Plus Query 53 CTTTGTCATGTATTCTCTGATTCTCCATGGAAGAAGGTTGGT-CGAATTGCATAAATGGC 111 |||||||||||||||| |||| |||||||||||||||||||| | | ||||| ||||||| Sbjct 223 CTTTGTCATGTATTCTGTGATACTCCATGGAAGAAGGTTGGTAC-AGTTGCAGAAATGGC 281 Query 112 GCCATTTGAGATTTGCTCTGCAAAATGCATCTCCTTTGTCCAATTCCT-TCTCTTCTGCT 170 | ||||||||||||| | ||||||||| ||| |||| || ||||||| | ||||||||| Sbjct 282 GTCATTTGAGATTTGTTGTGCAAAATGGATCAGCTTTTTCTAATTCCTAT-TCTTCTGCT 340 Query 171 -GCTGCTGCTGATGTGAGGTCAAGAGATGGTCGAAAAG-GAAAGAACTTTACGGTCTCTT 228 | |||| ||||| |||| ||||||||||||||||||| | ||||||||||| ||||||| Sbjct 341 AG-TGCTACTGATTTGAGCTCAAGAGATGGTCGAAAAGTG-AAGAACTTTACTGTCTCTT 398 Query 229 ACCTCGTTGATTCATTGGGTTTCA-CTACAAAGCTCGCTGAATCGATCTCAAGGAAAGTT 287 |||||||||||||||||||||| | ||||||| ||||||||||| ||||||| |||||| Sbjct 399 ACCTCGTTGATTCATTGGGTTT-AGCTACAAAACTCGCTGAATCAATCTCAAAGAAAGT- 456 Query 288 CA-TTTCACCGA-CAAGG-CAAATCCGGATTCT-GTTCTGAGTCTTTTGAGAAGTCATGG 343 || |||| || ||||| ||| ||| |||| | |||||||||||||| |||||| |||| Sbjct 457 CAGTTTCGT-GAACAAGGGCAA-TCCTGATT-TAGTTCTGAGTCTTTTTAGAAGTTATGG 513 Query 344 CTTCATAGATTCTCAGATCTCCTGCATCATTACCGATTATCC-AGAATTGCTTATACTAG 402 |||| | |||||||||||||| |||||||||| |||||||| ||| |||||| || ||| Sbjct 514 GTTCACAAATTCTCAGATCTCCAGCATCATTACGGATTATCCTAGA-TTGCTTCTAATAG 572 Query 403 ATGCTGAGAAATCACTTGGTCGCAAGCTTCAGATTCTGCAGTCTAGAGGAGCTTCAAGCT 462 |||||||||||||||||| | |||||||||| || || |||||||||||||||||||| Sbjct 573 ATGCTGAGAAATCACTTGATATCAAGCTTCAGTTTTTGGAGTCTAGAGGAGCTTCAAGCC 632 Query 463 CTGAACTCACTGAGATTGTTTCTACAGTTCCCAGAATCTTAGGAAGGAAATCT--A---T 517 |||| |||||| ||||||||||||||||||| | ||| || |||| |||| | | Sbjct 633 CTGAGCTCACTCAGATTGTTTCTACAGTTCCTAAAATATTGGGAATGAAAGAGGGAAAGT 692 Query 518 CACT-GT-A--TACTATGATG-CTGTCAAAGAAATTATAGTAGCCGATAAGAGTTC---G 569 | || | | ||||||||| | |||||||| ||||||| ||| ||||||||||| | Sbjct 693 CTCTAGGCAGATACTATGATTTC-GTCAAAGAGATTATAGAAGCAGATAAGAGTTCCAAG 751 Query 570 -A-G----TTA-TG--AAC-TC--CCACGGGGTTC-T---CAGGGGAATAAAATCCGAAA 613 | | || || ||| | ||| | || | | ||||| ||||||||| |||| Sbjct 752 TACGAAACTTTGTGTCAACCTTTGCCA-GAGGCTAATAGGCAGGGTAATAAAATCAGAAA 810 Query 614 TGTATCTGTT-TT-GAGACAATTGGGCATGCCTCAGTGGTTGTTATTAC-CCTTGCTTGT 670 ||| || ||| || ||||| ||||| |||||||| ||||||||| | ||||||| | Sbjct 811 TGTTTCGGTTCTTAGAGAC--TTGGGTGTGCCTCAGAAGTTGTTATT-CTCCTTGCTCAT 867 Query 671 CTCCAAAT-CGCAGCCTGTGTGTGGGAAAGAAAATTTTGAAGAATCCCTCAAGAAGGTTG 729 ||| | | | || ||||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct 868 CTCTGA-TGCCCAACCTGTTTGTGGAAAAGAAAATTTTGAAGAATCACTCAAGAAGGTTG 926 Query 730 TTGAGATGGGTTTTGATCCCACCACTTCAAAGTTTGTTGTAGCT-TT-GCGCATGCTTTA 787 ||||||||||||||||||| ||||| ||||||||||| |||| || | || || |||| Sbjct 927 TTGAGATGGGTTTTGATCCAACCACCTCAAAGTTTGTCCAAGCTCTTAGGGC-TG-TTTA 984 Query 788 CCAAATG-AGCGAGAAAACGATTGAAGAAAAAGTTG-TAGTCTATACAAGTGTA-GGTTT 844 | | || | ||| ||||| || ||||||| |||| | || |||| ||| || || || Sbjct 985 C-AGATTCACCGACAAAACAATAGAAGAAAGAGTTAAT-GTGTATA-AAGGGTTCGGCTT 1041 Query 845 TACTCTGGATGATGTATGGGAAATTTTCAAGAAGAC-TCCTTCCGTTTTGAA-AGTCTCC 902 | || |||| |||||||||| ||| |||||||| | ||||| | ||||||| ||| || Sbjct 1042 TGCTGTGGAAGATGTATGGGCAATGTTCAAGAA-ATGTCCTTACTTTTTGAATAGT-TCG 1099 Query 903 AAGAAGAAGAT 913 |||||||||| Sbjct 1100 GAGAAGAAGAT 1110 > AT1G62085.1 | Symbols: | Mitochondrial transcription termination factor family protein | chr1:22948757-22950142 REVERSE LENGTH=1386 Length=1386 Score = 532 bits (288), Expect = 3e-150 Identities = 719/914 (79%), Gaps = 82/914 (9%) Strand=Plus/Plus Query 60 ATGTATTCTCTGATTCTCCATGGAAGAAGGTTGGTCGAATTGCATAAATGGCGCCATTTG 119 |||||||||||||| |||||||||| |||||||||| | ||| | ||||| || ||||| Sbjct 1 ATGTATTCTCTGATACTCCATGGAAAAAGGTTGGTCCAGTTGAAGAAATGTCGTCATTTA 60 Query 120 AG-ATT----TG---CT-CTGC-AAAATGCATCTCCTTTGTCCAATTCCTTCTCTTCTGC 169 || || || || || | |||| ||||||||||| |||||||||||||| | ||| Sbjct 61 AGCGTTCCAGTGAACCTCCT-CGAAAAGGCATCTCCTTTTTCCAATTCCTTCTCCTATGC 119 Query 170 TGCTGCTGCTGATGTGAGGTC-AAGAGATGGTCGAAAAGGAAAGAACTTTACGGTCTCTT 228 | |||| | |||| || | | |||| |||||||||||| || ||| | ||||||| Sbjct 120 TAATGCTACAGATGCGA-GCCTTAGAGCTGGTCGAAAAGGGTTGAGTTTTTCTGTCTCTT 178 Query 229 ACCTCGTTGATTCATTGGGTTTCAC-TACAAAGCTCGCTGAATCGATCTCAAGGAAAGTT 287 |||||||||||||||||||||| || || |||| |||| ||||||||||||| |||||| Sbjct 179 ACCTCGTTGATTCATTGGGTTT-ACCTAAAAAGGTCGCAGAATCGATCTCAAAGAAAGT- 236 Query 288 CAT-TTC-ACCGACAA-GGCAAATCCGGATTCTGTTCTGAGTCTTTTGAGAAGTCATGGC 344 || ||| | ||||| ||||| ||| ||||||||||||||||| |||||||||||||| Sbjct 237 CAGCTTCGAG-GACAAAGGCAA-TCCTGATTCTGTTCTGAGTCTATTGAGAAGTCATGGG 294 Query 345 TTCA-TAGATTCTCAGATCTCCTGCATCATTACCGATTATCCAGAATTGCTTA-TA-CTA 401 |||| | |||||||||||||| |||||||||| ||||||||| ||||||| | || || Sbjct 295 TTCACT-GATTCTCAGATCTCAAGCATCATTACGGATTATCCACAATTGCT-AGTAGCT- 351 Query 402 GATGCTGAGAAATCACTTGGTCGCAAGCTTCAGATTCTGCAGTCTAGAGGAGCTTCAAGC 461 ||||||||||||||| |||||| |||||||||| |||||||||| |||||||||||||| Sbjct 352 GATGCTGAGAAATCAATTGGTCCCAAGCTTCAGTTTCTGCAGTCCAGAGGAGCTTCAAGG 411 Query 462 TCTGAACTCACTGAGATTGTTTCTACAGTTCCCAGAA-TCTTAGG-AAG-GA----A-AT 513 ||||| |||||| | ||||| ||||||||||| ||| |||| || ||| || | | Sbjct 412 TCTGAGCTCACTCATATTGTATCTACAGTTCCT-GAAATCTTGGGGAAGAGAGGGGACAA 470 Query 514 --CTATCA-CTGTATACTATGATGCTGTCAAAGAAATTATAGTAGCCGATAAGAGTTC-- 568 |||||| | ||||||||||| ||| ||||| ||||||| ||| ||||||||||| Sbjct 471 AACTATCAGCA-TATACTATGATTTTGTTAAAGAGATTATAGAAGCGGATAAGAGTTCCA 529 Query 569 -G----A---GTTATGA-ACTC----CCACG-GGGTTCTCAG--GG-GAATAAAATCCGA 611 | | |||||| | || ||| | |||| | || || ||| |||||| || Sbjct 530 AGTTCGAAAAGTTATGTCATTCTTTGCCA-GAGGGTAGTAAGCAGGAGAACAAAATCAGA 588 Query 612 AATGTATCTG-TTTTGAGACAATTGGGCATGCCTCAGTGGTTGTTATTACCC-TTGCTTG 669 ||||| | || |||||||| ||||||| | ||||| ||||||| || ||| |||||| Sbjct 589 AATGTTT-TGGTTTTGAGAGAATTGGGTGTTCCTCAAAGGTTGTTGTT-CCCATTGCTTA 646 Query 670 TCTCCAAATCGC-AGCCTGTGTGTGGGAAAGAAAATTTTGAAGAATCCCTCAAGAAGGTT 728 | || | || | | ||||| ||||| |||||||||||||||||||| |||||||| ||| Sbjct 647 TATCTGA-TCACCAACCTGTCTGTGGAAAAGAAAATTTTGAAGAATCACTCAAGAAAGTT 705 Query 729 GTTGAGATGGGTTTTGATCCCACCACTTCAAAGTTTGTTGTAGCT-TT-GCGCATGCTTT 786 |||||||||||||||||||| ||||| ||||||||||| |||| || | | || ||| Sbjct 706 GTTGAGATGGGTTTTGATCCAACCACCTCAAAGTTTGTCAAAGCTCTTAGGGT-TG-TTT 763 Query 787 ACCAAATGA-GCGAGAAAACGATTGAAGAAAAAGTTG-TAGTCTATACAAGTGTAGG-TT 843 || | || |||| ||||| || |||| ||||||| | |||| || |||| |||| || Sbjct 764 AC-AGATTCCGCGACAAAACTATAGAAGCAAAAGTTAAT-GTCTGTAAAAGTTTAGGCTT 821 Query 844 TTACTCT-GGATGATGTATGGGAAAT-TTTCAAGAAGACTCCTTCCGTTT-TGAAAGTCT 900 || || | ||| |||||||||| ||| ||| |||||| ||||||| ||| |||| ||| Sbjct 822 TT-CTGTTGGA-GATGTATGGGCAATGTTT-AAGAAGTGTCCTTCC-TTTCTGAATTTCT 877 Query 901 CCAAGAAGAAGATA 914 | |||| |||||| Sbjct 878 CTGAGAACAAGATA 891 Score = 193 bits (104), Expect = 5e-48 Identities = 317/415 (76%), Gaps = 34/415 (8%) Strand=Plus/Plus Query 907 AGAAGATATTGAAGTCTGCTGAAACATTTCTAGCCCTAGGATATAGCAGAGCTGAGTTTT 966 |||||||| |||| || |||||||||||||| | |||||| |||||||| |||| || Sbjct 989 AGAAGATAATGAACTCCATTGAAACATTTCTAGGCTTAGGATTTAGCAGAGATGAGGTTG 1048 Query 967 TGATGATGGTCAAGCG-TTATCCTCCTTGCATTGAATATTCTCT--AGAGTCGGTTAA-A 1022 ||||| | |||||| || ||||| ||| || || || ||| |||| | || || | Sbjct 1049 CAATGATAGCCAAGCGCTT-TCCTCAATGCCTT--ATTTTATCTGCAGAGACAGTGAAGA 1105 Query 1023 AGGAAGAATGAGTTTCTGGTGAAGAAGATGAATTGGCCACTAAATGCCT-TGGTTTTGCA 1081 | |||| |||||||||||||||||||||||||||||||||||| || | |||||| || Sbjct 1106 A-AAAGACTGAGTTTCTGGTGAAGAAGATGAATTGGCCACTAAAGGC-TGTGGTTT--CA 1161 Query 1082 -CCC-T-CAGGTGTTTGGATACAGCATGGAGAAGAGGATTATACCAAGGTGTAACGTACT 1138 ||| | | ||| ||||||||||| | |||||||||| ||| ||||||||||| ||| | Sbjct 1162 ACCCCTGC-GGTACTTGGATACAGCTTAGAGAAGAGGACTATCCCAAGGTGTAATGTAAT 1220 Query 1139 CAAAGTTCTCTTGTCGAAAGGA-CTGCTCAGAAAGAAAAGCGAACTACCTGCCGTGTCCT 1197 |||| |||| |||| |||||| | ||| | ||| | ||||| |||| |||| | Sbjct 1221 TAAAGCTCTCATGTCCAAAGGATC-GCTT-G---GAA--GTGAACTCCCTGGAATGTCGT 1273 Query 1198 CTGTTTTG-TCGTGTACCGATGAAGGATTTTTAAATAGGTATGTGATGAAGCAC-A--AC 1253 |||||||| | |||||| |||||| ||| ||| |||||||||| ||| || | || Sbjct 1274 CTGTTTTGGTA-TGTACCAATGAAGAATTCTTATGCAGGTATGTGAAGAACCATGATGAC 1332 Query 1254 --GA-GCTGGCGCCT-ACGTTGATGGCTATCTTCACCAAAGGTCGTGTTTCATAG 1304 || | | | ||| | |||||||||||| |||||| || ||| ||||||||| Sbjct 1333 AAGAAGATAGTACCTGA-GTTGATGGCTATTTTCACCGGAGATCGCGTTTCATAG 1386 > AT1G61960.1 | Symbols: | Mitochondrial transcription termination factor family protein | chr1:22902150-22903837 FORWARD LENGTH=1688 Length=1688 Score = 514 bits (278), Expect = 9e-145 Identities = 710/908 (78%), Gaps = 72/908 (8%) Strand=Plus/Plus Query 55 TTGTCATGTATTCTCTGATTCTCCATGGAAGAAGGTTGGTCGAATTGCATAAA-TGGCGC 113 ||||||||||| ||||||| | ||||||||||||||||||| | || || ||| || | Sbjct 85 TTGTCATGTATGCTCTGATACACCATGGAAGAAGGTTGGTCCAGTTACAGAAATTGTC-T 143 Query 114 CATTTGAGA-TTTGCTCTGCAAAATGCATCTCCTTTGTCCAATTCCTTCTCTTCTGCT-G 171 |||| ||| ||| | | ||||| | |||| ||||||||||||||||||||| |||| | Sbjct 144 AATTTCAGAGTTT-CAGTTCAAAACGGATCTGCTTTGTCCAATTCCTTCTCTTTTGCTAG 202 Query 172 CTGCTGCTGATGTGAGGTC-AAGAGATGGTCGAAAAGGAAAGAACTTTACGGTCTCTTAC 230 || |||||||| || | | |||| | | ||||| || |||||||| ||||||||| Sbjct 203 -TGTTGCTGATGCGA-CCCTTATAGATAGCCTTAAAGGTAACAACTTTACAGTCTCTTAC 260 Query 231 CTCGTTGATTCATTGGGTTTCACTACAAAGCTCGCTGAATCGATCT-CAAGGAAAGTTCA 289 || ||||||||||||||||| || ||||||||||| |||||||||| ||| ||||| | | Sbjct 261 CTAGTTGATTCATTGGGTTTAACCACAAAGCTCGCAGAATCGATCTCCAA-GAAAG-TAA 318 Query 290 -TTTC-ACCGACAAGG-CAAATCCGGATTCTGTTCTGAGTCTT-TTGAGAAGTCATGGCT 345 ||| | || ||| ||||||||||||||||||||||||| || | |||| |||| | Sbjct 319 GCTTCGA-GGA-GAGGAGAAATCCGGATTCTGTTCTGAGTCTTCTT-ACAAGTTATGGGT 375 Query 346 TCATAGATTCTCAGATCTCCTGCATCATTACCGAT-TATCCA-GAATTGCTTATACTAGA 403 ||| | | |||||||| || | ||||||| | || || ||| | ||||||| | |||| Sbjct 376 TCACAAAGTCTCAGATTTCAAGTATCATTA-CTATCTACCCACG-ATTGCTTGCATTAGA 433 Query 404 TGCTGAGAAAT-CACTTGGTCGCAAGCTTCAGAT-TCTGCAGTCTAGAGGAGCTTCAAGC 461 ||||||||||| || ||| || |||||||||| | ||||||||| ||||||||||||||| Sbjct 434 TGCTGAGAAATCCA-TTGCTCCCAAGCTTCAG-TCTCTGCAGTCCAGAGGAGCTTCAAGC 491 Query 462 TCTGAACTCACTGAGATTGTTTCTACAGTTCCCAGAATCTT-----AG-GAAGG---AAA 512 ||||| |||||| ||||||||||||| ||||| | |||||| || || || ||| Sbjct 492 TCTGAGCTCACTCAGATTGTTTCTACTGTTCCTAAAATCTTGGGGAAGAGAGGGCACAAA 551 Query 513 TCTATCACTGTATACTATGA-TGCTGTCAAAGAAATTATAGTAGCCGAT-A-AG----AG 565 ||||| |||||||||||||| | | |||||||| ||||||| ||| ||| | || || Sbjct 552 TCTATAACTGTATACTATGATTTC-GTCAAAGACATTATAGAAGCTGATAAGAGTTCTAG 610 Query 566 TT-CG---AGTTATG--A-AC--TCCCACGGGGTTCTC-AGGGGAATAAAATCCGAAATG 615 || || ||||||| | | | |||| ||| | | || |||||| ||| ||||| Sbjct 611 TTACGAAAAGTTATGTCATTCTTTTCCACAGGG-TAACAAGAAGAATAAGATCAGAAATA 669 Query 616 TATCTGTTTTGAGACAATTGGGCATGCCTCAGTGGTTGTTATTACCC-TTGCTTGTCTCC 674 | |||||||||||| ||||||| || ||||| | |||||||| ||| ||||| ||| | Sbjct 670 TCTCTGTTTTGAGAGAATTGGGTGTGGCTCAGCGTTTGTTATT-CCCTTTGCTCATCT-C 727 Query 675 AAATCG-CAGCCTGTGTGTGGGAAAGAAA-ATTTTGAAGAATCCCTCAAGAAGGTTGTTG 732 | || | || ||||| ||||| ||||||| | ||||||||||| |||||||||||||||| Sbjct 728 AGATGGCCAACCTGTCTGTGGTAAAGAAAGA-TTTGAAGAATCTCTCAAGAAGGTTGTTG 786 Query 733 AGATGGGTTTTGATCCC-ACCACTTCAAAGTTTGTTGTAGCTTTGCGCA-TGCTTTACCA 790 |||||||||||||||| | ||| ||||||| |||| |||| |||| | | |||||| Sbjct 787 AGATGGGTTTTGATCCGGAG-ACTACAAAGTTCGTTGAAGCTCTGCG-AGTTATTTACCG 844 Query 791 AATGAGCGAGAAAACGATTGAAGAAAAAGTTG-TAGTCTATACAAGTGT-AGGTTTTACT 848 ||||| || ||||| || ||||||||||| | ||||| | ||| || ||| ||| | Sbjct 845 TATGAGTGACAAAACAATAGAAGAAAAAGTCAAT-GTCTACAAAAG-GTTAGGCTTTGGT 902 Query 849 CTGGATGATGTATGGGAAATTTTCAAGAAGACTCCTTCCGTTTTGAAAGT-CTCCA-AGA 906 ||| ||||||||||| ||| ||||||||| ||||| ||||| | | ||| | ||| Sbjct 903 GTGGCTGATGTATGGGCAATCTTCAAGAAGTGGCCTTCTTTTTTGTCA-TACTC-AGAGA 960 Query 907 AGAAGATA 914 |||||||| Sbjct 961 AGAAGATA 968 > AT1G62150.1 | Symbols: | Mitochondrial transcription termination factor family protein | chr1:22970029-22971764 REVERSE LENGTH=1736 Length=1736 Score = 477 bits (258), Expect = 1e-133 Identities = 637/806 (79%), Gaps = 81/806 (10%) Strand=Plus/Plus Query 130 TGCAAAATGCA-TCTC--CTTTGTCCAATTCCTTCTCTTC---TGCTGCTGCTGCTGATG 183 ||||||||| | |||| ||| |||||||| |||||||| |||| |||||||||||| Sbjct 258 TGCAAAATGTATTCTCTGTTTTTTCCAATTCATTCTCTTCTGTTGCTACTGCTGCTGATG 317 Query 184 TGAGGTCAAGAGATGGTCGAAAAGGAAAGAACTTTACGGTCTCTTACCTCGTTGATTCAT 243 |||| | |||||| |||||||||| || |||||||| |||||||||||||||||||||| Sbjct 318 TGAGCTTTAGAGATAGTCGAAAAGGTAACAACTTTACTGTCTCTTACCTCGTTGATTCAT 377 Query 244 TGGGTTTCA-CTACAAAGCTCGCTGAATCGATCTCAAGGAAAGTTCA-TTTC-ACCGA-C 299 ||||||| | || |||||||||| ||||||||||| | |||||| || |||| | || | Sbjct 378 TGGGTTT-AGCTTCAAAGCTCGCAGAATCGATCTCGATGAAAGT-CAGTTTCGA--GAAC 433 Query 300 AAGG-CAAATCCGGATTCTGTTCTGAGTCTT-TTGAGAAGTCATG-GCTTCATAGATTCT 356 |||| ||| ||| ||| | ||||||| |||| || |||||||||| | |||| ||||||| Sbjct 434 AAGGGCAA-TCCTGATACAGTTCTGAATCTTCTT-AGAAGTCATGAG-TTCACAGATTCT 490 Query 357 CAGATCTCCTGCATCATTACCGATTATCCAGA-ATTGCTTATA-CTAGATGCTGAGAAAT 414 ||||||||| |||||||| | ||||||||| | ||||||| || | ||||||||| |||| Sbjct 491 CAGATCTCCAGCATCATTTCGGATTATCCA-ACATTGCTTGTAGC-AGATGCTGA-AAAT 547 Query 415 -CACTTGGTCGCAAGCTTCAGATTC-TGCAGTCTAGAGGAGCTTCAAGCTCTGAACTCAC 472 ||||||||| |||||||| | || |||||||||||||||||||||||||||| ||||| Sbjct 548 TCACTTGGTCCCAAGCTTCTG-TTGATGCAGTCTAGAGGAGCTTCAAGCTCTGAGCTCAC 606 Query 473 TGAGATTGTTTCTACAGTTCCCAGAATCTTAGGAAGGAAAT----C-----TATCA-CTG 522 |||||||||||||| |||||| | ||||||||||| |||| | |||| | | Sbjct 607 TGAGATTGTTTCTAAAGTTCCTAAAATCTTAGGAATGAAAGGGGACAAAAGTATCGGCAG 666 Query 523 TATACTATGATG-CTGTCAAAGAAATTATAGTAGCCGATAAGAGTTCGA-GTTATGAA-- 578 |||||||||| | |||||||| ||||||| ||| |||||||| || | ||| ||| Sbjct 667 -ATACTATGATATC-GTCAAAGAGATTATAGAAGCGGATAAGAGCTCCAAGTTC-GAAAA 723 Query 579 -CTCC--CA--C---G---G-GGTTC-TCAG--GG-GAATAAAATCCGAAATGTATCTG- 621 || || | | | || | | || || |||||||||| | ||||||| || Sbjct 724 GCTGTGTCATTCTTTGCCTGAGGGTAGTAAGCAGGAGAATAAAATCAGGAATGTAT-TGG 782 Query 622 TTTTGAGACAATTGGGCATGCCTCAGTGGTTGTTATTACCC-TTGCT-TGTCTCCAAATC 679 |||||||| | ||||| ||||||| |||||||||| | | ||||| | |||| || || Sbjct 783 TTTTGAGAGATTTGGGTGTGCCTCAAAGGTTGTTATT-CTCATTGCTCT-TCTCTAA-TC 839 Query 680 GC-A-GCCTGTGTGTGGGAAAGAAAATTTTGAAGAATCCCTCAAGAAGGTTGTTGAGATG 737 | | | ||| ||||| |||||||| ||||||||||| ||||| |||||||||| |||| Sbjct 840 ACCATGTCTGC-TGTGGAAAAGAAAAGTTTGAAGAATCACTCAACAAGGTTGTTGGGATG 898 Query 738 GGTTTTGATCCCACCACTTCAAAGTTTGTTGTAGCTTTGCGCAT-GCTTTACCAAATGAG 796 |||||||||||||||||| |||||||||| | |||||| |||| | ||||| | |||| Sbjct 899 GGTTTTGATCCCACCACTCCAAAGTTTGTGGAAGCTTTATGCATTG-TTTACGGATTGAG 957 Query 797 CGAGAAAACGATT-GAAGAAAAAGTTGTA-GTCTATACA-AG-TGTAGGTTTTACTCTGG 852 ||| |||| || | |||||||| || | ||||| | | || | | || || ||| | Sbjct 958 CGACAAAA-GACTAGAAGAAAAC-TTCAATGTCTACA-AGAGATTT-GGCTTAACTGTAA 1013 Query 853 ATGATGTATGGGAAATTTTCAAGAAG 878 | |||||||||||| ||||||||||| Sbjct 1014 ACGATGTATGGGAACTTTTCAAGAAG 1039 > AT1G62055.1 | Symbols: | pseudogene, hypothetical protein | chr1:22940331-22940864 REVERSE LENGTH=534 Length=534 Score = 267 bits (144), Expect = 3e-70 Identities = 261/316 (83%), Gaps = 14/316 (4%) Strand=Plus/Plus Query 194 AGATGGTCGAAAAGGAAAGAACTTT-ACGGTCTCTTACCTCGTTGATTCATTGGGTTTCA 252 ||||||||||||||| || | ||| || ||||||||||| ||||||||||||| || | Sbjct 183 AGATGGTCGAAAAGGTCAG-ATTTTCACTATCTCTTACCTCATTGATTCATTGGGATTAA 241 Query 253 -CTACAAAGCTCGCTGAATCGATCTCAAGGAAAGTTCATTTCACCGA-CA-AGG-CAAAT 308 | | ||| ||||||||||| ||||| ||||||| | | | ||| | ||| |||| Sbjct 242 CCGA-AAAACTCGCTGAATCCATCTCGAGGAAAG-T-A-AGCGTCGATGAGAGGAGAAAT 297 Query 309 CCGGATTCTGTTCTGAGTCTT-TTGAGAAGTCATGGCTTCATAGATTCTCAGATCTCCTG 367 || ||||||||||||| |||| || |||||| |||| |||| ||||||||||||||| | Sbjct 298 CCTGATTCTGTTCTGAATCTTCTT-AGAAGTTATGGTTTCACAGATTCTCAGATCTCAAG 356 Query 368 CATCATTACCGATTATCC-AGAATTGCTTATACTAGATGCTGAGAAATCACTTGGTCGCA 426 |||||||| ||||||| | ||||||||| |||||||| |||||||||||| || || Sbjct 357 TATCATTACAAATTATCCTCG-GTTGCTTATAGTAGATGCTAAGAAATCACTTGCTCCCA 415 Query 427 AGCTTCAGATTCTGCAGTCTAGAGGAGCTTCAAGCTCTGAACTCACTGAGATTGTTTCTA 486 |||||||| || |||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct 416 AGCTTCAGGTTTTGCAGTCTAGAGGAGCTTCAAGCTCTGAGCTCACTGAGACTGTTTCTA 475 Query 487 CAGTTCCCAGAATCTT 502 | ||||| | |||||| Sbjct 476 CCGTTCCTAAAATCTT 491 > AT1G62490.1 | Symbols: | Mitochondrial transcription termination factor family protein | chr1:23130405-23131533 REVERSE LENGTH=1005 Length=1005 Score = 244 bits (132), Expect = 1e-63 Identities = 271/333 (81%), Gaps = 30/333 (9%) Strand=Plus/Plus Query 56 TGTCATGTATTCTCTGATTCTCCATGGAAGAAGGT-TGGTCGAATTGCATAAATGGCGCC 114 ||| |||| ||||||||| |||||||||||||| | | |||| || ||||||||||| Sbjct 117 TGTGATGTGTTCTCTGATACTCCATGGAAGAAGATCT-ATCGAGTTACATAAATGGCGTA 175 Query 115 A-TTT-GAGATT---T---GC-TCTGCAAAATGCA-TCTC--CTTTGTCCAATTCCTTCT 162 | ||| | | || | || | ||||||||| | |||| |||| ||||||||||||| Sbjct 176 ACTTTAGTGTTTCAGTGAAGCTTTTGCAAAATGTATTCTCTGCTTTTTCCAATTCCTTCT 235 Query 163 ---C--TT-CT-GCTGCTGCTGCTGATGTGAGGTC-AAGAGATGGTCGAAAAGGAAAGAA 214 | || || | ||||||||||||||||| | | | |||| ||| |||||| ||||| Sbjct 236 CCACTGTTGCTAG-TGCTGCTGCTGATGTGA-GCCTTATAGATAGTCAAAAAGGTAAGAA 293 Query 215 CTTTACGGTCTCTTACCTCGTTGATTCATTGGGTTTCA-CTACAAAGCTCGCTGAATCGA 273 |||||| ||||||||||||||||||||||||||||| | ||| ||||||||||||||||| Sbjct 294 CTTTACAGTCTCTTACCTCGTTGATTCATTGGGTTT-ACCTAAAAAGCTCGCTGAATCGA 352 Query 274 TCTCAAGGAAAGTTCA-TTTC-ACCGACAAGGCAAATCCGGATTCTGTTCTGAGTCTTTT 331 | |||| |||| || | ||| | |||||||| ||||| |||||||||||||||||||| Sbjct 353 TTTCAAAGAAA-TTTAGATTCGA-GGACAAGGCCAATCCTGATTCTGTTCTGAGTCTTTT 410 Query 332 GAGAAGTCATGGCTTCATAGATTCTCAGATCTC 364 |||||||||||| |||| || |||||||||||| Sbjct 411 GAGAAGTCATGGGTTCACAGTTTCTCAGATCTC 443 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 69226551555 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5