BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475137
Length=1322
Score E
Sequences producing significant alignments: (Bits) Value
AT1G61980.1 | Symbols: | Mitochondrial transcription terminati... 1803 0.0
AT1G61970.1 | Symbols: | Mitochondrial transcription terminati... 1415 0.0
AT1G62120.1 | Symbols: | Mitochondrial transcription terminati... 976 0.0
AT1G62085.1 | Symbols: | Mitochondrial transcription terminati... 765 0.0
AT1G61960.1 | Symbols: | Mitochondrial transcription terminati... 717 0.0
AT1G61990.1 | Symbols: | Mitochondrial transcription terminati... 627 1e-178
AT1G62150.1 | Symbols: | Mitochondrial transcription terminati... 592 4e-168
AT1G62490.1 | Symbols: | Mitochondrial transcription terminati... 390 2e-107
AT3G46950.1 | Symbols: | Mitochondrial transcription terminati... 348 9e-95
> AT1G61980.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22908045-22909588 FORWARD
LENGTH=1544
Length=1544
Score = 1803 bits (976), Expect = 0.0
Identities = 1217/1332 (91%), Gaps = 22/1332 (2%)
Strand=Plus/Plus
Query 1 TGTCATGTATTCTCTGATTCGCCATGGAAGAAGGTTGGTCGAGTTGCAGAAATGGCGTCA 60
||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 114 TGTCATGTATTCTCTGATTCGCCATGGAAGAAGTTTGGTCGAGTTACAGAAATGGCGTCA 173
Query 61 TTTGAGTTTTTTAGTGCAAAAGGCATCTCCTTTATCCAATTCATTCTCCTCTGCTACTGT 120
|||||| |||||||||||||||| |||||||| |||||||| |||||||||||| |||
Sbjct 174 TTTGAGAGTTTTAGTGCAAAAGGCGTCTCCTTTGTCCAATTCCTTCTCCTCTGCTTCTGC 233
Query 121 TGCACGTACGAGTTCTAGAGTTGGTCGAAAAGGTAACAACTTTACAGTCTCTTACCTCGT 180
||| ||| |||| |||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 234 TGCGCGTTTGAGTCCTAGAGTTGGTCGAAAAGGTAAGAGCTTTACAGTCTCTTACCTCGT 293
Query 181 TGATTCTTTGGGTTTAGCTAGAAAGCTCGCAGAATCGATTTCAAGGAAAGTTAGCTTCGA 240
|||||| ||||||||| | | ||||||||| |||||| | |||||||| |||||||||||
Sbjct 294 TGATTCATTGGGTTTACCCAAAAAGCTCGCTGAATCGGTCTCAAGGAAGGTTAGCTTCGA 353
Query 241 GGACAAGGCCAATCCTGATTCTGTTCTGAATCTTTTGAGAAGTCATGGGTTCACTGATTC 300
|||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 354 GGACAAGGACAACCCTGACTCTGTTCTGAATCTTTTGAGAAGTCATGGGTTCACTGATTC 413
Query 301 TCAGATCTCAAGCATTGTTACGGATTATCCACAATTGCTTATAGCTGATGCTGAGAAATC 360
||||||||| | ||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct 414 TCAGATCTCCACCATCGTTACGGATTATCCACAATTGCTTGTAGCTGATGCTGAGAAATC 473
Query 361 CCTGGGTCCCAAGCTTCAGTTTTTGCAGTCTAGAGAAGCTTCAAGCTCTGAGCTCACTGA 420
|| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 474 ACTTGCTCCCAAGCTTCAGTTTTTGCAGTCTAGAGGAGCTTCAAGCTCTGAGCTCACTGA 533
Query 421 GATTGTTTC-ACAAGTTCCGAAAATCTTGGGAAAGAGAGGGCACAAAACTATCAGCGTAT 479
||||||||| || |||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 534 GATTGTTTCTAC-AGTTCCTAAAATCTTGGGAAAGAGAGGCCACAAAACTATCAGCGTAT 592
Query 480 ACTATGATTTCATCAAAGACACTTTATTACATGATAAGAGTTCCAAGAAGGAAAAGTCAT 539
|||||||||||||||||| || | |||| |||||||||||||||| ||||||||||
Sbjct 593 TCTATGATTTCATCAAAGAAAC--T-TTACTTGATAAGAGTTCCAAGTCCGAAAAGTCAT 649
Query 540 GTCATTCTTTTCCACAGGGTAATCTGGAGAACAAGATCAGAAATATATCGGTTTTGAGAG 599
|||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct 650 GTCAACCTTTTCCACAGGGTAATCTGGAGAACAAGATCAGAAATTTATCTGTTTTGAGAG 709
Query 600 AATTGGGAATGCCTCACAAGTTGTTATTCCCCTTGCTCATCTCTTGTGACGTACCTGTCT 659
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 710 AATTGGGGATGCCTCACAAGTTGTTATTCCCCTTGCTCATCTCTTGTGACGTACCTGTCT 769
Query 660 TCGGTAAAGAAAAATTTGAAGAATCCCTCAAGAAAGTTGTTGACATGGGTTTTGATCCGA 719
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 770 TCGGTAAAGAAAAATTTGAAGAATCCCTCAAGAAAGTTGTTGAGATGGGTTTTGATCC-A 828
Query 720 -CCTC-TGCAAAGTTTCTCGAAGCTCTACGAGTTGTTCAAAGATTGAGCGACAAAA-CAA 776
|| | | |||||||| | |||||| | | ||||||||||||||||||||||||| ||
Sbjct 829 TCCACCT-CAAAGTTTGTGGAAGCTTTGTGCGTTGTTCAAAGATTGAGCGACAAAAACA- 886
Query 777 TAGAAGAAAAAGTCAATGCGTATGAAAGGTTAGGCTTTGATGTGGGAA-ATGTATGGGCA 835
||||||| ||||||||||||||| ||||||||||||||||||||| || |||||||| ||
Sbjct 887 TAGAAGATAAAGTCAATGCGTATAAAAGGTTAGGCTTTGATGTGG-AATATGTATGGACA 945
Query 836 GTGTTCAAGAGGTGGCCAAACTTTCTGACACATTCAGAGAAGAAGATATTGAGCACCATT 895
|||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||
Sbjct 946 GTGTTCAAGAGGTGGCCAAACTTTCTGACACACTCGGAGAAGAAGATATTGAACACCATT 1005
Query 896 GAAACATTTCTAGGCCT-GGGATTCACCAGAGATGAGTTTTCCATGTTGGTTAAGCGCTT 954
||||||||||||||||| ||| |||| ||||||||||||| | |||| ||||||||||
Sbjct 1006 GAAACATTTCTAGGCCTAGGG-TTCAGCAGAGATGAGTTTAGCGTGTTAATTAAGCGCTT 1064
Query 955 TCCTCAGGGCATTGGATTATCCCCAGAGACGGTTAAAAAGAAGACCGAGTTTCTGGTCAA 1014
|||||||||||||||||||||| | |||| ||||||||||||||| |||||| |||| ||
Sbjct 1065 TCCTCAGGGCATTGGATTATCCGCGGAGATGGTTAAAAAGAAGACTGAGTTTTTGGTAAA 1124
Query 1015 GAAGATGAACTGGCCAATAAAGGCT-TTGGTTTCAAACCCTGCGATACTTGGATACAGCA 1073
||||||||| |||||| |||||||| ||| |||||||||||||| | ||||||||||||
Sbjct 1125 GAAGATGAATTGGCCACTAAAGGCTCTTG-TTTCAAACCCTGCGGTGCTTGGATACAGCC 1183
Query 1074 TGGAGAAGAGGACTGTCCCAAGGGGTAACGTAAT-CAAAGCTCTCATCTCCAAAGGATTG 1132
| |||||||||||||||||||||||||||||| | ||| |||||||||||||| ||||||
Sbjct 1184 TAGAGAAGAGGACTGTCCCAAGGGGTAACGTAGTTCAA-GCTCTCATCTCCAAGGGATTG 1242
Query 1133 ATCGGAAGTGAACTCCCTTCGATATCACATGTCTTTATATGTACCAATCAGGTGTTCTTA 1192
|||||||||||||||||||||||||| | |||||| |||||||| ||||||||||||||
Sbjct 1243 ATCGGAAGTGAACTCCCTTCGATATCGCGTGTCTTCGTATGTACCGATCAGGTGTTCTTA 1302
Query 1193 AACAGGTATGTGAAGAATCACGAGGACAAGCAGCTGGTGACTGAGTTGATGGCTATCTAT 1252
|||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||
Sbjct 1303 AACAGGTATGTGAAGAGGCATGAGGACAAGCAGCTGGAGACTGAGTTGATGGCTATCTAT 1362
Query 1253 CGTGCTTCATAGATCACAAGGCTTG-TCAAGAATTTTGGTTT-TATCTTTGAATATCTGA 1310
||||||||||||||||||||||| | ||||| |||||||||| ||||||| |||||||||
Sbjct 1363 CGTGCTTCATAGATCACAAGGCT-GATCAAGGATTTTGGTTTCTATCTTTAAATATCTGA 1421
Query 1311 AAACCTCAATTT 1322
|| |||||||||
Sbjct 1422 AATCCTCAATTT 1433
> AT1G61970.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22904486-22907630 FORWARD
LENGTH=2848
Length=2848
Score = 1415 bits (766), Expect = 0.0
Identities = 1114/1279 (87%), Gaps = 35/1279 (3%)
Strand=Plus/Plus
Query 1 TGTCATGTATTCTCTGATTCGCCATGGAAGAAGGTTGGT-CGAGTTGCAGAAATGGCGTC 59
|||||||||| ||||||| | |||||||||||||||||| | |||||||||||||| ||
Sbjct 224 TGTCATGTATGCTCTGATACTCCATGGAAGAAGGTTGGTAC-AGTTGCAGAAATGGTGTA 282
Query 60 A-TTTGAGTTTTTTAGTGCAAAAGGCATCTCCTTTATCCAA-TTCATTCTCCTCTGCTAC 117
| ||| ||| ||| ||||||||||||||| ||| |||||| ||| |||||||||||| |
Sbjct 283 ACTTT-AGTCTTTCAGTGCAAAAGGCATCACCTACATCCAATTTC-TTCTCCTCTGCTTC 340
Query 118 TGTTGCACGTACGAGTTCTAGAGTTGGTCGAAAAGGTAACAACTTTACAGTCTCTTACCT 177
|| ||| || |||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct 341 TGCTGCGTGTTTGAGTCCTAGAGTTGGTCGAAAAGGAAACAACTTTACAGTCTCTTACCT 400
Query 178 CGTTGATTCTTTGGGTTTAGCTAGAAAGCTCGCAGAATCGATTTCAAGGAAAGTTAGCTT 237
|||||||| ||||| ||| | | ||| ||||| ||||| |||||| |||| ||||||||
Sbjct 401 TGTTGATTCATTGGGCTTAACCACAAAACTCGCTGAATCCATTTCACGGAAGGTTAGCTT 460
Query 238 CGAGGACAAGGCCAATCCTGATTCTGTTCTGAATCTTTTGAGAAGTCATGGGTTCACTGA 297
|||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct 461 CGAGGACAAGAACAATCCTGATTCTGTTCTGAATCTTTTGACAAGTCATGGGTTCACAGG 520
Query 298 TTCTCAGATCTCAAGCATTGTTACGGATTATCCACAATTGCTTATAGCTGATGCTGAGAA 357
|||||||||||| | ||| ||| |||||| ||||| ||||||||||| |||||||||||
Sbjct 521 TTCTCAGATCTCCACCATCATTAGGGATTACCCACAGTTGCTTATAGCAGATGCTGAGAA 580
Query 358 ATCCCTGGGTCCCAAGCTTCAGTTTTTGCAGTCTAGAGAAGCTTCAAGCTCTGAGCTCAC 417
||| || ||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct 581 ATCACTTGGTCCCAAGCTTCAGTTTTTGCAGTCTAGAGGAGCTTCAAGCTCTGAAATCAC 640
Query 418 TGAGATTGTTTC-ACAAGTTCCGAAAATCTTGGGAAAGAGAGGGCACAAAACTATCAGCG 476
|||||||||||| | ||||||| |||| |||||||||| ||||||||||||||||||||
Sbjct 641 TGAGATTGTTTCTTC-AGTTCCGGAAATATTGGGAAAGAAAGGGCACAAAACTATCAGCG 699
Query 477 TATACTATGATTTCATCAAAGACACTTTATTACATGATAAGAGTTCCAAGAAGGAAAAGT 536
|||||||||||||||||||||||||||| | ||| |||||||||||||| |||||||
Sbjct 700 TATACTATGATTTCATCAAAGACACTTTGCT---TGAGAAGAGTTCCAAGAACGAAAAGT 756
Query 537 CATGTCATTCTTTTCCACAGGGTAATCTGGAGAACAAGATCAGAAATATATCGGTTTTGA 596
|||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 757 TATGTCATTCTTTGCCACAGGGTAATCTGGAGAACAAGATCAGAAATGTATCGGTTTTAA 816
Query 597 GAGAATTGGGAATGCCTCACAAGTTGTTATTCCCCTTGCTCATCTCTTG-T-GACGTACC 654
|||||||||||||||||||||||||||||||| ||||||||||||| | | | | |||
Sbjct 817 GAGAATTGGGAATGCCTCACAAGTTGTTATTCTCCTTGCTCATCTCC-GATAGCCA-ACC 874
Query 655 TGTCT-TCGGTAAAGAAAAATTTGAAGAATCCCTCAAGAAAGTTGTTGACATGGGTTTTG 713
||| | | || |||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct 875 TGTATGT-GGAAAAGAAAAATTTGAAGAAACCCTCAAGAAAGTTGTTGAGATGGGTTTTG 933
Query 714 ATCCGACCTC-TGCAAAGTTTCTCGAAGCTCTACGAGTTGTT--CAAAGATTGAGCGACA 770
|||| ||| | | |||||||| |||||||||||| |||| || |||| || || ||| |
Sbjct 934 ATCCTACCACCT-CAAAGTTTGTCGAAGCTCTACAAGTTATTTACAAA-AT-GAACGAGA 990
Query 771 AAACAATAGAAGAAAAAGTCAATG-CGTATGAAAGGTTAGGCTTTGATGTGGGAAATGTA 829
||||||| |||||||||||| || | ||| |||| |||||||||||||||||| |||||
Sbjct 991 AAACAATCGAAGAAAAAGTCCATCTC-TATAAAAGCTTAGGCTTTGATGTGGGAGATGTA 1049
Query 830 TGGGCA-GTGTTCAAGAGGTGGCCAAACTTTCTGACAC-ATTCAGAGAAGAAGATATTG- 886
||| || || || || || ||||||| || |||| | || | ||||||||||| |||
Sbjct 1050 TGGTCAAGTTTTAAAAAG-TGGCCAATCTCGCTGAGAGTAT-CGGAGAAGAAGATGTTGG 1107
Query 887 AGCACCATTGAAACATTTCTAGGCCTGGGATTCACCAGAGATGAGTTTTCCATGTTGGTT 946
| | |||||||||||||||| ||||| ||||||| ||||||||||||| ||| | ||||
Sbjct 1108 A-CTCCATTGAAACATTTCTTGGCCTAGGATTCAGCAGAGATGAGTTTGCCAAGATGGTC 1166
Query 947 AAGCGCTTTCCTCAGGGCATTGGATTATCCCCAGAGACGGTTAAAAAGAAGACCGAGTTT 1006
|||| |||||||| | ||||||||||||| |||||||||| |||||||| || ||||||
Sbjct 1167 AAGCACTTTCCTCCGTGCATTGGATTATCTACAGAGACGGTCAAAAAGAAAACTGAGTTT 1226
Query 1007 CTGGTCAAGAAGATGAACTGGCCAATAAAGGCT-TTGGTTTCAAACCCTGCGATACTTGG 1065
||||| ||||||||||| |||||| |||||||| ||| |||||||||||||| || ||||
Sbjct 1227 CTGGTGAAGAAGATGAATTGGCCACTAAAGGCTGTTG-TTTCAAACCCTGCGGTATTTGG 1285
Query 1066 ATACAGCATGGAGAAGAGGACTGTCCCAAGGGGTAACGTAATCAAAGCTCTCATCTCCAA 1125
||| ||| |||||||||||| ||| ||||||||||||||||||||||||||||| |||||
Sbjct 1286 ATATAGCCTGGAGAAGAGGATTGTTCCAAGGGGTAACGTAATCAAAGCTCTCATGTCCAA 1345
Query 1126 AGGATTGATCG-GAAGTGAACTCCCTTCGATATCACATGTCTTTATATGTACCAATCAGG 1184
||||||||| | ||| |||||||||||||||||| |||| | || |||||||| ||||
Sbjct 1346 AGGATTGAT-GAGAAATGAACTCCCTTCGATATCGTGTGTCCTCATGTGTACCAAGCAGG 1404
Query 1185 TGTTCTTAAACAGGTATGTGAAGAATCACGAGGACAAGCAGCTGGTGACTGAGTTGATGG 1244
|||| ||||||||||||||| |||||||| |||||||||||||||||| ||||||||||
Sbjct 1405 TGTTTTTAAACAGGTATGTGGCGAATCACGTGGACAAGCAGCTGGTGACGGAGTTGATGG 1464
Query 1245 CTATCTATCGTGCTTCATA 1263
|||||||||||||||||||
Sbjct 1465 CTATCTATCGTGCTTCATA 1483
> AT1G62120.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22960191-22961779 REVERSE
LENGTH=1589
Length=1589
Score = 976 bits (528), Expect = 0.0
Identities = 1047/1290 (81%), Gaps = 65/1290 (5%)
Strand=Plus/Plus
Query 1 TGTCATGTATTCTCTGATTCGCCATGGAAGAAGGTTGGTCGAGTTGCAGAAATGGCGTCA 60
||| |||||||||||||||| ||||||||||| ||||||| |||||||||||||||| ||
Sbjct 137 TGTAATGTATTCTCTGATTCTCCATGGAAGAAAGTTGGTCCAGTTGCAGAAATGGCGCCA 196
Query 61 TTTGA--GTTT---T---T-TAGTGCAAAA-GGCATCTCCTTTATCCAAT-TCAT-T-CT 107
||||| |||| | | | | ||||| || ||| |||| |||||| | | | ||
Sbjct 197 TTTGAGGGTTTCAGTGAATCTTTTTCAAAATGG-ATCAGCTTTTTCCAATACCTTCTCCT 255
Query 108 CCTCTGCTACTGTTGCACG-TACGAGTTCTAGAGTTGGTCGAAAAGGTAACAACTTTACA 166
||||||||| || ||| | | ||| || |||| ||||||||||||| |||||||||||
Sbjct 256 CCTCTGCTATTGCTGC-TGATGTGAGCTCAAGAGATGGTCGAAAAGGTCACAACTTTACA 314
Query 167 GTCTCTTACCTCGTTGATTCTTTGGGTTTAGCTA-GAAAGCTCGCAGAATCGATTTCAAG 225
|| ||||||||||||||||| || |||||||||| |||| |||| |||||||| || |
Sbjct 315 GTTTCTTACCTCGTTGATTCATTAGGTTTAGCTACAAAAG-TCGCTGAATCGATCTCCAT 373
Query 226 GAAAGTTAGCTTCGAGGACAAGGCCAATCCTGATTCTGTTCTGAATCTTTTGAGAAGTCA 285
|||||| || ||||| |||||| ||| |||||||||||||||| |||||||||||||||
Sbjct 374 GAAAGTCAGTTTCGATAACAAGGGCAACCCTGATTCTGTTCTGAGTCTTTTGAGAAGTCA 433
Query 286 TGGGTTCACTGATTCTCAGATCTC-AAGCATTGTTACGGA-TTATCCACAA--TTGCTTA 341
|||||||||||||||||||||||| || ||| ||| ||| || ||| ||| |||||||
Sbjct 434 TGGGTTCACTGATTCTCAGATCTCCAA-CATCATTA-GGACTT-TCC-CAAGATTGCTTA 489
Query 342 TAGCT-GATGCTGAGAAATCCCTGGGTCCCAAGCTTCAGTTTTTGCAGTCTAGAGAAGCT 400
| || ||||||||||||||||| | |||||||||||||||| ||||||| | || |||
Sbjct 490 TC-CTAGATGCTGAGAAATCCCTTGCTCCCAAGCTTCAGTTTCTGCAGTCCATAGGTGCT 548
Query 401 TCAAGCTCTGAGCTCACTGAGATTGTTTCA-CAAGTTCCGAAAATCTTGGGAAAGAGA-- 457
||||||||||||||||| |||| |||||| || ||||||||||| ||||| ||||||
Sbjct 549 TCAAGCTCTGAGCTCACCGAGACTGTTTCTGCA-GTTCCGAAAATATTGGGGAAGAGAAA 607
Query 458 GGGCACAAAACTATCAGC-GTATACTATGATTTCATCAAAGACACTT-TATTA-CATGAT 514
||||| || || ||||| | ||||||||||||| |||||| || || || | | |||
Sbjct 608 GGGCA-AAT-CTCTCAGCAG-ATACTATGATTTCGTCAAAGTCA-TTATAGAAGCG-GAT 662
Query 515 AAGAGTTCCAAGA-AGGAAAAGTCATGTCATTCTTTTCCACAGGGTAAT---CTGGAGAA 570
|||||||||||| || |||||| |||||||||||| ||| |||||| | | ||||||
Sbjct 663 AAGAGTTCCAAGTTAG-AAAAGTTATGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAGAA 721
Query 571 CAAGATCAGAAATATATCGGTTTTGAGAGAATTGGGAATGCCTCACAAGTTGTTATTCCC 630
||| ||||||||| ||| ||| ||||||||| |||| ||||||| | |||||||||| |
Sbjct 722 CAAAATCAGAAATTTATTGGTGTTGAGAGAAATGGGTGTGCCTCAGAGGTTGTTATTCTC 781
Query 631 CTTGCTCATCTCTTG-TGACGTACCTGTCT-TCGGTAAAGAAAAATTTGAAGAATCCCTC 688
||||| || || | || || | ||| | | ||||||||||||||| ||||||| |||
Sbjct 782 ATTGCTTATATCC-GATGCCGGAGATGTTTGT-GGTAAAGAAAAATTTAAAGAATCACTC 839
Query 689 AAGAAAGTTGTTGACATGGGTTTTGATCCGACCTCTGCAAAGTTTCTCGAAGCTCT-A-C 746
||||| | |||||| || ||||||||||| ||| | |||| ||| || ||||||| | |
Sbjct 840 AAGAAGGCTGTTGAGATTGGTTTTGATCCAACCACCGCAACTTTTGTCAAAGCTCTTAAC 899
Query 747 GAGTTGTTCAAAGATTGAGCGACAAAACAATAGAAGAA-AAAGTCAATGCGTATGAAAGG 805
| || || | |||| ||||||||| ||| ||| || ||| ||||||| | | |||||
Sbjct 900 G--TTCTTTACGGATTAAGCGACAAAGGAATTGAA-AATAAATTCAATGCCTGTAAAAGG 956
Query 806 TTAGGCTTTGATGTGGGAA-ATGTATGGGCAGTGTTCAAGAGGTGGCCAAACTTTCTGAC 864
|||||||| | ||||| | ||||||||||| ||||||||| |||||||||| |||||||
Sbjct 957 TTAGGCTTGGCTGTGG-ACGATGTATGGGCAATGTTCAAGAAGTGGCCAAACATTCTGAC 1015
Query 865 ACATTCAGAGAAGAAGATATTGAGCACCATTGAAACATTTCTAGGCCTGGGATTCACCAG 924
| | || |||||||||||| || | || ||||||||||||||||||| ||||||| |||
Sbjct 1016 AAAGTCTGAGAAGAAGATAGAGAACTCCGTTGAAACATTTCTAGGCCTAGGATTCAGCAG 1075
Query 925 AGATGAGTTTTCCATGTTGGTTAAGCGCTTTCCTCAGGGCATTGGATTATCCC-CAGAGA 983
||||||||||| ||| |||| ||||| || |||||| ||||||||| || | |||||
Sbjct 1076 AGATGAGTTTTTGATGATGGTCAAGCGATTCCCTCAGTGCATTGGAT-ATTCTACAGAGT 1134
Query 984 CGGTTAAAAAGAAGACCGAGTTTCTGGTCAAGAAGATGAACTGGCCAATAAAGGCTTTGG 1043
| | || | |||||| ||||||||||| | | ||||||| |||||| |||||||| |||
Sbjct 1135 TGATGAAGACGAAGACTGAGTTTCTGGTGACGGAGATGAATTGGCCACTAAAGGCTGTGG 1194
Query 1044 TTTCAAACCCTGC-GATACTTGGATACAGCATGGAGAAGAGGACTGTCCCAAGGGGTAAC 1102
||||| |||| | | |||| ||||||||| | ||||||||||||||||||||| ||||
Sbjct 1195 CTTCAATCCCT-CAGGTACTCGGATACAGCCTAGAGAAGAGGACTGTCCCAAGGTGTAAT 1253
Query 1103 GTAATCAAAGCTCTCATCTCCAAAGGATTGATCGGAAGTGAACTCCCTTCGATATCA-CA 1161
|| ||||||| ||||||||| ||||||||| ||| ||||||||||||| | ||||| |
Sbjct 1254 GTTATCAAAGTTCTCATCTCAAAAGGATTGCTCGAAAGTGAACTCCCTCCAATATCCTC- 1312
Query 1162 TGTCTTT-ATATGTACCAATCAGGTGTTCTTAAACAGGTATGTGAAGAATCACGAGGACA 1220
||| ||| | | |||||| | ||||||| ||| | | |||||| | ||| || || ||||
Sbjct 1313 TGT-TTTGACAAGTACCAGTGAGGTGTTTTTATATATGTATGTTAGGAAACATGATGACA 1371
Query 1221 AGCAGCTGGTGACTGAGTTGATGGCTATCT 1250
||||||| ||| ||||||||||||||||||
Sbjct 1372 AGCAGCTTGTGGCTGAGTTGATGGCTATCT 1401
> AT1G62085.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22948757-22950142 REVERSE
LENGTH=1386
Length=1386
Score = 765 bits (414), Expect = 0.0
Identities = 751/908 (83%), Gaps = 46/908 (5%)
Strand=Plus/Plus
Query 5 ATGTATTCTCTGATTCGCCATGGAAGAAGGTTGGTCGAGTTGCAGAAATGGCGTCATTTG 64
|||||||||||||| | |||||||| |||||||||| ||||| ||||||| ||||||||
Sbjct 1 ATGTATTCTCTGATACTCCATGGAAAAAGGTTGGTCCAGTTGAAGAAATGTCGTCATTTA 60
Query 65 AGTTTTTTAGTG--------C-AAAAGGCATCTCCTTTATCCAATTCATTCTCCTCTGCT 115
|| || |||| | |||||||||||||||| |||||||| ||||||| ||||
Sbjct 61 AGCGTTCCAGTGAACCTCCTCGAAAAGGCATCTCCTTTTTCCAATTCCTTCTCCTATGCT 120
Query 116 ACTGTTGCACG-TACGAGTTC-TAGAGTTGGTCGAAAA-GGTAACAACTTTACAGTCTCT 172
| || | || | | |||| | ||||| |||||||||| ||| | ||| | ||||||
Sbjct 121 AATGCTACA-GATGCGAG-CCTTAGAGCTGGTCGAAAAGGGT-TGAGTTTTTCTGTCTCT 177
Query 173 TACCTCGTTGATTCTTTGGGTTTAGCTAGAAAGCTCGCAGAATCGATTTCAAGGAAAGTT 232
|||||||||||||| ||||||||| ||| |||| ||||||||||||| |||| ||||||
Sbjct 178 TACCTCGTTGATTCATTGGGTTTACCTAAAAAGGTCGCAGAATCGATCTCAAAGAAAGTC 237
Query 233 AGCTTCGAGGAC-AAGGCCAATCCTGATTCTGTTCTGAATCTTTTGAGAAGTCATGGGTT 291
|||||||||||| |||| |||||||||||||||||||| ||| |||||||||||||||||
Sbjct 238 AGCTTCGAGGACAAAGG-CAATCCTGATTCTGTTCTGAGTCTATTGAGAAGTCATGGGTT 296
Query 292 CACTGATTCTCAGATCTCAAGCATTGTTACGGATTATCCACAATTGCTTA-TAGCTGATG 350
|||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||
Sbjct 297 CACTGATTCTCAGATCTCAAGCATCATTACGGATTATCCACAATTGCT-AGTAGCTGATG 355
Query 351 CTGAGAAATCCCTGGGTCCCAAGCTTCAGTTTTTGCAGTCTAGAGAAGCTTCAAGCTCTG 410
|||||||||| | |||||||||||||||||| ||||||| |||| ||||||||| ||||
Sbjct 356 CTGAGAAATCAATTGGTCCCAAGCTTCAGTTTCTGCAGTCCAGAGGAGCTTCAAGGTCTG 415
Query 411 AGCTCACTGAGATTGTTTC-ACAAGTTCC-GAAAATCTTGGGAAAGAGAGGGCACAAAAC 468
|||||||| | ||||| || ||| ||||| |||| ||||||| ||||||||| |||||||
Sbjct 416 AGCTCACTCATATTGTATCTACA-GTTCCTGAAA-TCTTGGGGAAGAGAGGGGACAAAAC 473
Query 469 TATCAGCGTATACTATGATTTCATCAAAGACACTT-TATTA-CATGATAAGAGTTCCAAG 526
||||||| ||||||||||||| | ||||| | || || | | |||||||||||||||
Sbjct 474 TATCAGCATATACTATGATTTTGTTAAAGAGA-TTATAGAAGCG-GATAAGAGTTCCAAG 531
Query 527 AAGGAAAAGTCATGTCATTCTTTTCCACAGGGTAAT---CTGGAGAACAAGATCAGAAAT 583
||||||| |||||||||||| ||| |||||| | | ||||||||| |||||||||
Sbjct 532 TTCGAAAAGTTATGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAGAACAAAATCAGAAAT 591
Query 584 ATATCGGTTTTGAGAGAATTGGGAATGCCTCACAAG-TTGTTATTCCCCTTGCTCATCTC 642
| | |||||||||||||||||| | ||||| ||| ||||| ||||| ||||| || ||
Sbjct 592 GTTTTGGTTTTGAGAGAATTGGGTGTTCCTCA-AAGGTTGTTGTTCCCATTGCTTATATC 650
Query 643 TTG-TGACGTACCTGTCT-TCGGTAAAGAAAAATTTGAAGAATCCCTCAAGAAAGTTGTT 700
| | | || |||||||| | || |||||||| ||||||||||| |||||||||||||||
Sbjct 651 T-GATCACCAACCTGTCTGT-GGAAAAGAAAATTTTGAAGAATCACTCAAGAAAGTTGTT 708
Query 701 GACATGGGTTTTGATCCGACCTC-TGCAAAGTTTCTCGAAGCTCT-ACGAGTTGTTCAAA 758
|| |||||||||||||| ||| | | |||||||| || ||||||| | | |||||| | |
Sbjct 709 GAGATGGGTTTTGATCCAACCACCT-CAAAGTTTGTCAAAGCTCTTAGG-GTTGTTTACA 766
Query 759 GATTGAGCGACAAAACAATAGAAGAAAAAGTCAATG-C-GTATGAAAGGTTAGGCTTTGA 816
|||| |||||||||| ||||||| |||||| |||| | ||| |||| |||||||||
Sbjct 767 GATTCCGCGACAAAACTATAGAAGCAAAAGTTAATGTCTGTA--AAAGTTTAGGCTTTTC 824
Query 817 TGTGGGAAATGTATGGGCAGTGTTCAAGAGGTGGCCAAACTTTCTGACACAT-TCAGAGA 875
||| ||| ||||||||||| |||| |||| ||| || |||||||| | | || ||||
Sbjct 825 TGTTGGAGATGTATGGGCAATGTTTAAGAAGTGTCCTTCCTTTCTGA-ATTTCTCTGAGA 883
Query 876 AGAAGATA 883
| ||||||
Sbjct 884 ACAAGATA 891
> AT1G61960.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22902150-22903837 FORWARD
LENGTH=1688
Length=1688
Score = 717 bits (388), Expect = 0.0
Identities = 742/907 (82%), Gaps = 48/907 (5%)
Strand=Plus/Plus
Query 1 TGTCATGTATTCTCTGATTCGCCATGGAAGAAGGTTGGTCGAGTTGCAGAAA-TGGCGTC 59
|||||||||| ||||||| | ||||||||||||||||||| |||| |||||| || | |
Sbjct 86 TGTCATGTATGCTCTGATACACCATGGAAGAAGGTTGGTCCAGTTACAGAAATTGTC-TA 144
Query 60 ATTTGAGTTTTTTAGTGCAAAA-GGCATCTCCTTTATCCAATTCATTCTCCTCTGCTACT 118
|||| || ||| ||| ||||| || |||| |||| |||||||| ||||| | ||||| |
Sbjct 145 ATTTCAGAGTTTCAGTTCAAAACGG-ATCTGCTTTGTCCAATTCCTTCTCTTTTGCTAGT 203
Query 119 GTTGCACG-TACGAGTTC-TAGAGTTGGTCGAAAAGGTAACAACTTTACAGTCTCTTACC 176
||||| | | ||| | || || | | | ||||||||||||||||||||||||||||
Sbjct 204 GTTGC-TGATGCGA-CCCTTATAGATAGCCTTAAAGGTAACAACTTTACAGTCTCTTACC 261
Query 177 TCGTTGATTCTTTGGGTTTAGCTAGAAAGCTCGCAGAATCGATTTC-AAGGAAAGTTAGC 235
| |||||||| ||||||||| | | |||||||||||||||||| || ||| ||||| |||
Sbjct 262 TAGTTGATTCATTGGGTTTAACCACAAAGCTCGCAGAATCGATCTCCAAG-AAAGTAAGC 320
Query 236 TTCGAGGACAAGGCCAA-TCCTGATTCTGTTCTGAATCTT-TTGAGAAGTCATGGGTTCA 293
|||||||| | || || ||| ||||||||||||| |||| || | |||| |||||||||
Sbjct 321 TTCGAGGAGA-GGAGAAATCCGGATTCTGTTCTGAGTCTTCTT-ACAAGTTATGGGTTCA 378
Query 294 CTGATTCTCAGATCTCAAGCATTGTTACGGAT-TATCCACAATTGCTTATAGCT-GATGC 351
| | |||||||| ||||| || |||| || || |||| ||||||| | | |||||
Sbjct 379 CAAAGTCTCAGATTTCAAGTATCATTACT-ATCTACCCACGATTGCTTGCAT-TAGATGC 436
Query 352 TGAGAAATCCCTGGGTCCCAAGCTTCAGTTTTTGCAGTCTAGAGAAGCTTCAAGCTCTGA 411
|||||||||| | | |||||||||||||| | ||||||| |||| |||||||||||||||
Sbjct 437 TGAGAAATCCATTGCTCCCAAGCTTCAGTCTCTGCAGTCCAGAGGAGCTTCAAGCTCTGA 496
Query 412 GCTCACTGAGATTGTTTC-ACAAGTTCCGAAAATCTTGGGAAAGAGAGGGCACAAAACTA 470
||||||| |||||||||| || ||||| ||||||||||| ||||||||||||||| |||
Sbjct 497 GCTCACTCAGATTGTTTCTACT-GTTCCTAAAATCTTGGGGAAGAGAGGGCACAAATCTA 555
Query 471 TCAGC-GTATACTATGATTTCATCAAAGACACTT-TATTA-CATGATAAGAGTTCCAAGA 527
| | | ||||||||||||||| ||||||||| || || | | |||||||||||| | |
Sbjct 556 TAA-CTGTATACTATGATTTCGTCAAAGACA-TTATAGAAGC-TGATAAGAGTTCTA-GT 611
Query 528 -AGGAAAAGTCATGTCATTCTTTTCCACAGGGTAATCTGGA-GAACAAGATCAGAAATAT 585
| ||||||| |||||||||||||||||||||||| | || ||| ||||||||||||||
Sbjct 612 TACGAAAAGTTATGTCATTCTTTTCCACAGGGTAA-CAAGAAGAATAAGATCAGAAATAT 670
Query 586 ATCGGTTTTGAGAGAATTGGGAATGCCTCA-CAAGTT-GTTATTCCCCTTGCTCATCTCT 643
|| ||||||||||||||||| || |||| | ||| ||||||||| |||||||||||
Sbjct 671 CTCTGTTTTGAGAGAATTGGGTGTGGCTCAGC--GTTTGTTATTCCCTTTGCTCATCTCA 728
Query 644 TG-TGACGTACCTGTCT-TCGGTAAAGAAAAATTTGAAGAATCCCTCAAGAAAGTTGTTG 701
| || | |||||||| | |||||||||| |||||||||||| |||||||| |||||||
Sbjct 729 -GATGGCCAACCTGTCTGT-GGTAAAGAAAGATTTGAAGAATCTCTCAAGAAGGTTGTTG 786
Query 702 ACATGGGTTTTGATCCG-ACCTCTGCAAAGTTTC-TCGAAGCTCTACGAGTTGTTCAAAG 759
| ||||||||||||||| | || ||||||| | | |||||||| |||||| || | |
Sbjct 787 AGATGGGTTTTGATCCGGAGA-CTACAAAGTT-CGTTGAAGCTCTGCGAGTTATTTACCG 844
Query 760 -ATTGAGCGACAAAACAATAGAAGAAAAAGTCAATG-CGTATGAAAGGTTAGGCTTTGAT 817
|| ||| |||||||||||||||||||||||||||| | || ||||||||||||||| |
Sbjct 845 TAT-GAGTGACAAAACAATAGAAGAAAAAGTCAATGTC-TACAAAAGGTTAGGCTTTGGT 902
Query 818 GTGGGAAATGTATGGGCAGTGTTCAAGAGGTGGCCAAACTTTCT-GACACATTCAGAGAA 876
|||| ||||||||||| | ||||||| |||||| |||| | | || | ||||||||
Sbjct 903 GTGGCTGATGTATGGGCAATCTTCAAGAAGTGGCCTT-CTTTTTTGTCATACTCAGAGAA 961
Query 877 GAAGATA 883
|||||||
Sbjct 962 GAAGATA 968
> AT1G61990.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22911205-22912935 FORWARD
LENGTH=1731
Length=1731
Score = 627 bits (339), Expect = 1e-178
Identities = 996/1295 (77%), Gaps = 118/1295 (9%)
Strand=Plus/Plus
Query 1 TGTCATGTATTCTCTGATTCGCCATGGAAGAAGGTTGGTCGAGTTGCAGAAATGGCGTCA 60
||| |||||||||||||||| ||||||||||||||||||| | | |||||||| || | |
Sbjct 245 TGTAATGTATTCTCTGATTCTCCATGGAAGAAGGTTGGTCCAATCGCAGAAAT-GCTTGA 303
Query 61 -TTTGAGTTTTTTAGTGCAAAAGGCATCTCCTTTATCCAATTCATTCTCCTCTGCT--A- 116
||||||| ||| ||||||||| |||| | ||| |||||||| ||||| |||||| |
Sbjct 304 GTTTGAGTGTTTCAGTGCAAAATGCATTTGTTTTGTCCAATTCCTTCTCTTCTGCTAGAG 363
Query 117 CTGTTGCACGTACGAG-TTCTAGAGTTGGTCGAAAAGGTAACAACTTTACAGTCTCTTAC 175
||| || | || ||| | ||||| |||||||||||| || ||||||||||||||||||
Sbjct 364 CTGCTG-ATGT--GAGCAT-TAGAGATGGTCGAAAAGGGAAGAACTTTACAGTCTCTTAC 419
Query 176 CTCGTTGATTCTTTGGGTTTAGCTAGAAAGCTCGCAGAATCGATTTCAAGGAAAGTTAGC 235
||||||||||| ||||||||| ||| ||||||||| ||||| || |||||||||||||||
Sbjct 420 CTCGTTGATTCATTGGGTTTATCTAAAAAGCTCGCTGAATCCATCTCAAGGAAAGTTAGC 479
Query 236 TTCGAGGACAAGGCCAATCCTGATTCTGTTCTGAA-TCT-TTTGAGAAGTCATGGGTTCA 293
|| |||||||||| |||||||||||||||||| || ||| ||| |||||| | |||||||
Sbjct 480 TTTGAGGACAAGGTCAATCCTGATTCTGTTCT-AAGTCTGTTT-AGAAGTTACGGGTTCA 537
Query 294 CTGATTCTCAGATCTCAAGCATTGTTACGGATTATCCACAATTGCTTATAGCTGATGCTG 353
| |||||||||||||| | ||| ||||||||||||| ||||||| |||| ||||||
Sbjct 538 CAGATTCTCAGATCTCTACCATCATTACGGATTATCCGTTATTGCTTGTAGCAGATGCTA 597
Query 354 AGAAATCCCTGGGTCCCAAGCTTCAGTTTTTGCAGTCTAGAGAAGCTTCAAGCTCTGAGC 413
||||| | || |||| |||||||||| || |||||||||||| ||||||||||||||||
Sbjct 598 AGAAAGCACTTGGTCGCAAGCTTCAGATTCTGCAGTCTAGAGGAGCTTCAAGCTCTGAGA 657
Query 414 TCACTGAGATTGTTTC-ACAAGTTCCGAAAATCTTGGGAAAGAGAGGGCACAAAACTATC 472
|||||||||||||||| ||| || |||| |||||| ||||||| | | ||||
Sbjct 658 TCACTGAGATTGTTTCTACA-GTACCGAGAATCTTAGGAAAGA-A----AT----CTATT 707
Query 473 AGC-GTATACTATGATT-TCATCAAAGACACTT-TATTA-CATGATAAGAGTTCCAAGAA 528
| | |||||||||||| | ||||||||| || || || | |||| |||||| ||
Sbjct 708 A-CTGTATACTATGATGCTG-TCAAAGACA-TTATAGTAGCC-GATACGAGTTC---GA- 759
Query 529 GGAAAAGTCATGTCATTCTTTTCCACAGGGTAATCTGGAGAACAAGATCAGAAATATATC 588
| | ||| | || ||||||||| || || ||| || ||| ||||| ||||
Sbjct 760 GT-----T-ATGA-ACTC----CCACAGGGTTCTCAGGGGAATAAAATCCGAAATGTATC 808
Query 589 GGTTTTGAGAGAATTGGGAATGCCT-CACAAGTTGTTATTCCCCTTGCTCATCTCTTG-T 646
|| |||||||||||| || |||||| | | ||||||||| ||||||||| |||| |
Sbjct 809 GGCTTTGAGAGAATTAGGCATGCCTTCTCG-GTTGTTATTACCCTTGCTCGTCTCCAAAT 867
Query 647 GACGTA-CCTGTCT-TCGGTAAAGAAAAATTTGAAGAATCCCTCAAGAAAGTTGTTGACA 704
|| | ||||| | | || |||||||| ||||| | |||||| ||||| |||||||| |
Sbjct 868 --CGCAGCCTGTGTGT-GGAAAAGAAAATTTTGATGCATCCCTTAAGAAGGTTGTTGAGA 924
Query 705 TGGGTTTTGATCCGACCTCTGC-AAAGTTTCTCGAAGCTCTACGAGTTG-TTCA--AAGA 760
|||| |||||||| ||| | | ||| ||| | |||| | || | || || | || |
Sbjct 925 TGGGGTTTGATCCCACCACCACTAAA-TTTGTTTTAGCTTTGCG-GATGCTTTACCAA-A 981
Query 761 TTGAGCGACAAAACAATAGAAGAAAAAGTCA-A-TGCGT-ATGAAAGGTTAGGCTTTGA- 816
| |||||| ||||| || ||||||||||| | | | | | ||| | ||||| ||| |
Sbjct 982 T-GAGCGAGAAAACGATTGAAGAAAAAGTTGTAGT-CTTTA-GAA-GTTTAGGTTTT-AC 1036
Query 817 TGTGGGAA-ATGTATGGGCAGTGTTCAAGAGGTGGCCAAACT-TTCTGACACAT-TC-AG 872
||||| | ||||||||| | | ||||||| | || || || ||| | | || |
Sbjct 1037 TGTGG-ATGATGTATGGGAAATTTTCAAGAAGACTCCTT-CTGTTTTGAAAG-TCTCCA- 1092
Query 873 AGAAGAAGATATTGA-G-CACCATTGAAACATTTCTAGGCCTGGGAT-TCACCAGAGATG 929
||||||||||||||| | | | | ||||| ||||||| ||| |||| | | ||||| ||
Sbjct 1093 AGAAGAAGATATTGAAGTCGGC-T-GAAACGTTTCTAGACCTAGGATAT-AGCAGAGCTG 1149
Query 930 AGTTT-TCCATGTTGGTTAAGCGCTT-TCCTCAGGGCATTGGATTATCCCC-AGAGACGG 986
||||| | ||| |||||||||| || ||||| |||||| || || | |||| | |
Sbjct 1150 AGTTTCTG-ATGATGGTTAAGCG-TTATCCTCCTTGCATTGAAT-ATTCTGTAGAGTCTG 1206
Query 987 TTAAAAAGAAGACCGAGTTTCTGGTCAAGAAGATGAACTGGCCAATAAAGGCTTTGGTTT 1046
|||||||||||| ||||||||||| ||||||||||| |||||| ||| || |||||||
Sbjct 1207 TTAAAAAGAAGAATGAGTTTCTGGTGAAGAAGATGAAATGGCCACGAAACGCCTTGGTTT 1266
Query 1047 CAAACCCTGC-GATACTTGGATACAGCATGGAGAAGAGGACTGTCCCAAGGGGTAACGTA 1105
||||| | | | |||||||||||||||||||||||| | | |||||| ||||| ||
Sbjct 1267 TGCACCCT-CAGGTGTTTGGATACAGCATGGAGAAGAGGATTATACCAAGGTGTAACATA 1325
Query 1106 ATCAAAGCTCTCATCTCCAAAGGATTGATC-G---G--AAGTGAACTCCCTTC-GATATC 1158
|| |||||||| | || |||||| || || | | ||||||||| ||| | | | ||
Sbjct 1326 CTCGAAGCTCTCTTGTCGAAAGGACTGCTCAGAAAGGGAAGTGAACTACCTGCAG-TGTC 1384
Query 1159 A-CATGTCTTTATA-TGTACCAATCA-GG-TGTTCTTAAACAGGTATGTGAAGAATCACG 1214
| ||| ||| | |||||| || | || | || ||| |||||||||||| ||| |||
Sbjct 1385 CTC-TGT-TTTGTCGTGTACCGATGAAGGAT-TT-TTAGACAGGTATGTGATGAAGCAC- 1439
Query 1215 AGGACAAGCAGCTGGTGACTGA-GTTGATGGCTAT 1248
| || | |||||||| || | ||||||||||||
Sbjct 1440 A--AC--G-AGCTGGTGCCT-ACGTTGATGGCTAT 1468
> AT1G62150.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22970029-22971764 REVERSE
LENGTH=1736
Length=1736
Score = 592 bits (320), Expect = 4e-168
Identities = 670/831 (81%), Gaps = 55/831 (7%)
Strand=Plus/Plus
Query 2 GTCATGTATTC-TCT-GA-TTCGC-CATGG-AAGAAGGTTGGTCGAGTTGCAGAAATGGC 56
||||||| ||| ||| | ||| | ||||| || |||||||||| |||| |||||| |||
Sbjct 173 GTCATGTGTTCTTCTCTAGTTC-CTCATGGTAA-AAGGTTGGTCCAGTTTCAGAAAGGGC 230
Query 57 GTCA-TTTGAGT-TTT---T-TAG----TGCAAAAGGCA-TCTC--CTTTATCCAATTCA 103
|| | ||| ||| ||| | || ||||||| | | |||| ||| |||||||||
Sbjct 231 GTGACTTT-AGTGTTTCAGTGAAGCTTTTGCAAAATGTATTCTCTGTTTTTTCCAATTCA 289
Query 104 TTCTC--CT-CTGCTACTGTTGCACG-TACGAG-TTCTAGAGTTGGTCGAAAAGGTAACA 158
||||| || |||||||| ||| | | ||| || ||||| | |||||||||||||||
Sbjct 290 TTCTCTTCTGTTGCTACTGCTGC-TGATGTGAGCTT-TAGAGATAGTCGAAAAGGTAACA 347
Query 159 ACTTTACAGTCTCTTACCTCGTTGATTCTTTGGGTTTAGCTAGAAAGCTCGCAGAATCGA 218
||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct 348 ACTTTACTGTCTCTTACCTCGTTGATTCATTGGGTTTAGCTTCAAAGCTCGCAGAATCGA 407
Query 219 TTTCAAGGAAAGTTAGCTTCGAGGACAAGGCCAATCCTGATTCTGTTCTGAATCTT-TTG 277
| || | |||||| || |||||| |||||| |||||||||| | |||||||||||| ||
Sbjct 408 TCTCGATGAAAGTCAGTTTCGAGAACAAGGGCAATCCTGATACAGTTCTGAATCTTCTT- 466
Query 278 AGAAGTCATGGGTTCACTGATTCTCAGATCTCAAGCATTGTTACGGATTATCC-ACAATT 336
|||||||||| |||||| |||||||||||||| ||||| || |||||||||| || |||
Sbjct 467 AGAAGTCATGAGTTCACAGATTCTCAGATCTCCAGCATCATTTCGGATTATCCAAC-ATT 525
Query 337 GCTTATAGCTGATGCTGAGAAA-TCCCTGGGTCCCAAGCTTCAGTTTTTGCAGTCTAGAG 395
|||| |||| |||||||| ||| || || ||||||||||||| ||| ||||||||||||
Sbjct 526 GCTTGTAGCAGATGCTGA-AAATTCACTTGGTCCCAAGCTTCTGTTGATGCAGTCTAGAG 584
Query 396 AAGCTTCAAGCTCTGAGCTCACTGAGATTGTTTC-ACAAGTTCCGAAAATCTTGGGAAAG 454
||||||||||||||||||||||||||||||||| | ||||||| |||||||| |||| |
Sbjct 585 GAGCTTCAAGCTCTGAGCTCACTGAGATTGTTTCTA-AAGTTCCTAAAATCTTAGGAATG 643
Query 455 AGAGGGCACAAAACTATCAGC-GTATACTATGATTTCATCAAAGACACTT-TATTA-CAT 511
| |||| |||||| |||| || | |||||||||| || ||||||| | || || | |
Sbjct 644 AAAGGGGACAAAAGTATCGGCAG-ATACTATGATATCGTCAAAGAGA-TTATAGAAGCG- 700
Query 512 GATAAGAGTTCCAAGAAGGAAAAG-TCATGTCATTCTTTTCCACAGGGTAAT---CTGGA 567
|||||||| |||||| |||||| | ||||||||||| || |||||| | | |||
Sbjct 701 GATAAGAGCTCCAAGTTCGAAAAGCTG-TGTCATTCTTTGCCTGAGGGTAGTAAGCAGGA 759
Query 568 GAACAAGATCAGAAATATATCGGTTTTGAGAGAATTGGGAATGCCTCACAAG-TTGTTAT 626
||| || ||||| ||| ||| |||||||||||| ||||| ||||||| ||| |||||||
Sbjct 760 GAATAAAATCAGGAATGTATTGGTTTTGAGAGATTTGGGTGTGCCTCA-AAGGTTGTTAT 818
Query 627 TCCCCTTGCTCATCTCTTGTGACG-TACCTGTCT-TCGGTAAAGAAAAATTTGAAGAATC 684
|| | |||||| ||||| | || | ||| || | || |||||||| |||||||||||
Sbjct 819 TCTCATTGCTCTTCTCTAATCACCATGTCTG-CTGT-GGAAAAGAAAAGTTTGAAGAATC 876
Query 685 CCTCAAGAAAGTTGTTGACATGGGTTTTGATCCGACCTCTGCAAAGTTTCTCGAAGCTCT 744
||||| || ||||||| |||||||||||||| ||| || |||||||| | |||||| |
Sbjct 877 ACTCAACAAGGTTGTTGGGATGGGTTTTGATCCCACCACTCCAAAGTTTGTGGAAGCTTT 936
Query 745 ACG-AGTTGTTCAAAGATTGAGCGACAAAACAATAGAAGAAAAAGTCAATG 794
| | | ||||| | ||||||||||||||| | |||||||||| ||||||
Sbjct 937 ATGCA-TTGTTTACGGATTGAGCGACAAAAGACTAGAAGAAAACTTCAATG 986
> AT1G62490.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:23130405-23131533 REVERSE
LENGTH=1005
Length=1005
Score = 390 bits (211), Expect = 2e-107
Identities = 397/483 (82%), Gaps = 27/483 (6%)
Strand=Plus/Plus
Query 431 CAAGTTCCGAAAATCTTGGGAAAGAGAGGGCACAAAACTATCAGCGTATACTATGATTTC 490
||| |||| ||| |||||||||| ||||||||||||||| ||||| ||||||||||||||
Sbjct 443 CAA-TTCCTAAACTCTTGGGAAAAAGAGGGCACAAAACTCTCAGCTTATACTATGATTTC 501
Query 491 ATCAAAGACACTTTATTA-CATGATAAGAGTTCCAAGAAGGAAAAGTCATGTCATTCTTT 549
| ||||| | |||| | || ||||||||||| ||| | |||| | |||||| |||||
Sbjct 502 GTTAAAGAGAGTTTAGAAGCA-GATAAGAGTTCTAAGTATGAAACTTTATGTCAGTCTTT 560
Query 550 TCCACAGGGTAATCTGGAGAACAAGATCAGAAATATATCGGTTTTGAGAGAATTGGGAAT 609
|||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||
Sbjct 561 TCCACAGGGTAATCTGGAGAACAAGAAGAGAAATGTATCGGTTTTAAGAGAATTGGGAAT 620
Query 610 GCCTCACAAGTTGTTATTCCCCTTGCTCATCTC--TTGTGACGTACCTGTCT-TCGGTAA 666
||||||||||||||||||||||||||| || || ||| | | |||||| | | || ||
Sbjct 621 GCCTCACAAGTTGTTATTCCCCTTGCTTATATCCGTTG-GTCA-ACCTGTATGT-GGAAA 677
Query 667 AGAAAAATTTGAAGAA-TCCCTCAAGAAAGTTGTTGACATGGGTTTTGATCCGACCTCTG 725
||| | |||| || | || |||||||| || ||||| |||||||||||||||||| | |
Sbjct 678 AGATAGATTT-AATACGTCTCTCAAGAAGGTAGTTGAGATGGGTTTTGATCCGACCACCG 736
Query 726 CAAAGTTTCTCGAAGCTCTACGA-GT-TGTT-CAAAGATTGAGCGACAAAACAATAGAAG 782
|||||||| || ||||||| | | || | || | || || || |||||||||||||||||
Sbjct 737 CAAAGTTTGTCAAAGCTCTCC-ACGTATCTTACGAA-AT-GAACGACAAAACAATAGAAG 793
Query 783 AAAAAGTCAATG-CGTATGAAAGGTTAGGCTTTGATGTGGGAA-ATGTATGGGCAGTGTT 840
|||||||||||| | || ||| ||||||||||| ||||| || ||||||||| | | ||
Sbjct 794 AAAAAGTCAATGTC-TACAAAATGTTAGGCTTTGCTGTGG-AAGATGTATGGGTAATCTT 851
Query 841 CAAGAGGTGGCCAAACT-TTCTGACACATTCAGAG-AAGAAGAT-ATTGAGCACCATTGA 897
||||| ||||||| ||| || ||| | | |||||| || ||||| | | || || |||||
Sbjct 852 CAAGAAGTGGCCATACTCTT-TGAAATACTCAGAGGAA-AAGATTACTCAG-ACGATTGA 908
Query 898 AAC 900
|||
Sbjct 909 AAC 911
Score = 259 bits (140), Expect = 4e-68
Identities = 272/332 (82%), Gaps = 24/332 (7%)
Strand=Plus/Plus
Query 1 TGTCATGTATTCTCTGATTCGCCATGGAAGAAGGT-TGGTCGAGTTGCAGAAATGGCGTC 59
||| |||| ||||||||| | |||||||||||| | | ||||||| || |||||||||
Sbjct 117 TGTGATGTGTTCTCTGATACTCCATGGAAGAAGATCT-ATCGAGTTACATAAATGGCGTA 175
Query 60 A-TTTGAGT-TTT---T-TAG----TGCAAAAGGCA-TCTC--CTTTATCCAATTCATTC 106
| ||| ||| ||| | || ||||||| | | |||| |||| |||||||| |||
Sbjct 176 ACTTT-AGTGTTTCAGTGAAGCTTTTGCAAAATGTATTCTCTGCTTTTTCCAATTCCTTC 234
Query 107 T-C-CT-CTGCTACTGTTGC-AC-G-TACGAGTTC-TAGAGTTGGTCGAAAAGGTAACAA 159
| | || ||||| || ||| | | | ||| | || || | ||| ||||||||| ||
Sbjct 235 TCCACTGTTGCTAGTGCTGCTGCTGATGTGAG-CCTTATAGATAGTCAAAAAGGTAAGAA 293
Query 160 CTTTACAGTCTCTTACCTCGTTGATTCTTTGGGTTTAGCTAGAAAGCTCGCAGAATCGAT 219
||||||||||||||||||||||||||| ||||||||| ||| ||||||||| ||||||||
Sbjct 294 CTTTACAGTCTCTTACCTCGTTGATTCATTGGGTTTACCTAAAAAGCTCGCTGAATCGAT 353
Query 220 TTCAAGGAAAGTTAGCTTCGAGGACAAGGCCAATCCTGATTCTGTTCTGAATCTTTTGAG 279
||||| |||| |||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct 354 TTCAAAGAAATTTAGATTCGAGGACAAGGCCAATCCTGATTCTGTTCTGAGTCTTTTGAG 413
Query 280 AAGTCATGGGTTCACTGATTCTCAGATCTCAA 311
||||||||||||||| | ||||||||||||||
Sbjct 414 AAGTCATGGGTTCACAGTTTCTCAGATCTCAA 445
> AT3G46950.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr3:17289369-17290963 FORWARD
LENGTH=1595
Length=1595
Score = 348 bits (188), Expect = 9e-95
Identities = 584/764 (76%), Gaps = 72/764 (9%)
Strand=Plus/Plus
Query 149 AAAGGTAACAACTTT-ACAGTCTCTTACCTCGTTGATTCTTTGGGTTTAG-CTAGAAAGC 206
||||| || ||||| ||||||||||| |||||||| || |||||||| | ||| ||| |
Sbjct 227 AAAGGGAAGTACTTTCACAGTCTCTTATCTCGTTGAATCATTGGGTTT-GACTAAAAAAC 285
Query 207 TCGCAGAATCGATTTCAAGGAAAGTTAGCTTCGAGGACAAGGCCAATCCTGATTCTGTTC 266
| |||||| | || |||| |||||| | |||||| ||||||| ||||| ||||||||||
Sbjct 286 TTGCAGAAACAATCTCAAAGAAAGTCACCTTCGAAGACAAGGTAAATCCAGATTCTGTTC 345
Query 267 TGAATCTT-TTGAGAAGTCATGGGTTCACTGATTCTCAGATCTCAAGCATTGTTACGGAT 325
|||||||| || |||||| ||||||| | ||||||||||| || || || | | || |
Sbjct 346 TGAATCTTCTT-AGAAGTAATGGGTTTAAAGATTCTCAGATATCTAGGATCATAAGGGCT 404
Query 326 TATCCACAATTGCTTATAGCTGATGCTGAGAAATCCCTGGGTCCCAAGCTTCAGTTTTTG 385
|| |||| ||||||| || | |||||||||||||| || |||| ||||||||||||||
Sbjct 405 TACCCACGATTGCTTGTAACAGATGCTGAGAAATCTCTTCGTCCAAAGCTTCAGTTTTTA 464
Query 386 CAGTCTAGAGAAGCTTCAAGCTCTGAGCTCACT-GAGATTGTTTCACAA-GTTCCGAA-A 442
||||||||| |||||||||||||||| ||| | ||||||||||| || ||||| || |
Sbjct 465 AAGTCTAGAGGAGCTTCAAGCTCTGAGGTCA-TAGAGATTGTTTC-GAATGTTCC-AACA 521
Query 443 ATCTTGGGA-AAGAGAGG-GCACA-AAACTATCAGCGTATACTATGATTTCATCAAAGAC 499
||||| ||| |||| ||| | | | || || | || |||||||||||||| | || |||
Sbjct 522 ATCTT-GGATAAGAAAGGTG-A-AGAATCTGTTAGTTTATACTATGATTTCGTTAAGGAC 578
Query 500 ACTTTATTACATGATAAGAGTTCCAAGAAGGAAAAGTCATGTCA-TTCTTTTCCACAGGG 558
| ||| | || ||| | | | || || | | ||| | ||||| |||| ||||
Sbjct 579 A--TTA-TGCAAGAT--G-G-T--AA-AA-G----TTTGTGT-ATTTCTTGTCCAGAGGG 622
Query 559 TAA-TCTGGAGAACAAG-A-TCAGAAATATATCGGTTTTGAGAGAATTGGGAATGCCTCA 615
|| || ||| || | || ||||||||||||||||||||||||||||| | |||||
Sbjct 623 AAAGAAAGG-TAAC-AGAATTC-GAAATATATCGGTTTTGAGAGAATTGGGAGTACCTCA 679
Query 616 CAAGTTGTTATTCCCCTTGCTCATCTCTTG-TGA-CGTACCTGTCT-TCGGTAAAGAAAA 672
|||||||| || | ||||| || ||| | | | | |||||| | | |||||||| ||
Sbjct 680 GAAGTTGTTGTTTTCATTGCTTATATCTAGAT-ATCA-ACCTGTTTGT-GGTAAAGAGAA 736
Query 673 ATTTGAAGAATCCCTCAAGAAAGTTGTTGACATGGGTTTTGATCCGACCTC--TGCAAAG 730
||||||||| | |||||||||||||| ||||||||||||||| | | | ||| |
Sbjct 737 GTTTGAAGAAAGTTTAAAGAAAGTTGTTGATATGGGTTTTGATCCGGC-TAAATCCAA-G 794
Query 731 TTTCTCGAAGCTCTACGA-GTTGTTCA--AAGATTGAGCGACAAAACAATAGAAGAAAAA 787
||| | |||||| | | | || ||| | || || |||||| ||||| |||||||| |||
Sbjct 795 TTTGTGGAAGCTTTGC-ATGTAGTTTACGAA-AT-GAGCGAGAAAACGATAGAAGAGAAA 851
Query 788 GTCAATGCGTATGAA-AGGTTAGGCTTTGATGTG--G--GAAATGTATGGGC-AGTGTTC 841
|| |||| |||| || |||||||||||| | ||| | || || |||||| | | |||
Sbjct 852 GTGAATGTGTAT-AAGAGGTTAGGCTTT-A-GTGAAGCCGAGAT--ATGGGCGATT-TTC 905
Query 842 AAGAGGTGGCCAAACTTTCTGACACATTCA--GAGAAGAAGATA 883
|||| |||||| ||||| | | | |||| ||||||||||||
Sbjct 906 AAGAAGTGGCCTTACTTTTTAA-A-ATTCTCTGAGAAGAAGATA 947
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 65059906320
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5