BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475148
Length=1685
Score E
Sequences producing significant alignments: (Bits) Value
AT1G61810.3 | Symbols: BGLU45 | beta-glucosidase 45 | chr1:2283... 1493 0.0
AT1G61820.1 | Symbols: BGLU46 | beta glucosidase 46 | chr1:2283... 885 0.0
> AT1G61810.3 | Symbols: BGLU45 | beta-glucosidase 45 | chr1:22830015-22834728
FORWARD LENGTH=1696
Length=1696
Score = 1493 bits (808), Expect = 0.0
Identities = 899/943 (95%), Gaps = 6/943 (1%)
Strand=Plus/Plus
Query 535 GCCAATATATGTTTCAAGCATTTTGGAAACCGAGTTAAATACTGGACCACGCTTAACGAA 594
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 564 GCCGATATATGTTTCAAGCATTTTGGAAACCGAGTTAAATACTGGACCACGCTTAACGAA 623
Query 595 CCAAATCAACAATTAATCTTAGGCTATCTAACAGGTAAATTTCCACCGTCTCGTTGTTCC 654
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 624 CCAAATCAACAATTAATCTTAGGCTATCTAACAGGTAAATTTCCACCCTCTCGTTGCTCC 683
Query 655 TCGCCATACGGGAACTGTAGCCA-GGGAAGTTCCGAAACCGAACCTTTCATAGCCACGCA 713
||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||| | ||
Sbjct 684 TCGCCATACGGGAACTGTAGCCAGGGGAA-TTCAGAAACCGAACCTTTCATAGCCGCACA 742
Query 714 TAACATGATCCTTGCACACGCAAAAGCGGTTAACATATACCAGACCAAATATCAGAAAGA 773
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 743 TAACATGATCCTTGCACACGCAAAAGCGGTTAACATATACAAGACCAAATATCAGAAAGA 802
Query 774 ACAAAAGGGAAGCATTGGCATTGTGGTACAAACATCATGGTTTGAACCCATTAGTGAATC 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 803 ACAAAAGGGAAGCATTGGCATTGTGGTACAAACATCATGGTTTGAACCCATTAGTGATTC 862
Query 834 CAATGCGGATAAAGAAGCTGCTGAGAGAGCTCAATCATTTTACTCTAATTGGATTCTCGA 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 863 CAATGCGGATAAAGAAGCTGCTGAGAGAGCTCAATCATTTTACTCTAATTGGATTCTAGA 922
Query 894 TCCCGTTATATATGGGAAATACCCAAAAGAAATGGTAAATATTCTTGGACCAGCCTTGCC 953
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct 923 TCCCGTTATATATGGGAAATATCCAAAAGAAATGGTAGATATTCTTGGACCAGCCTTGCC 982
Query 954 GCAATTTTCGAGCAATGAAGTGAAGAACTTAGAGAACTCGAGAGCAGATTTCATCGGTAT 1013
||||||||||||||||||||||||||||||||||| ||||| ||||||||| | |||||
Sbjct 983 ACAATTTTCGAGCAATGAAGTGAAGAACTTAGAGAAGTCGAGGGCAGATTTCGTTGGTAT 1042
Query 1014 TAATCACTATACAAGTTACTTCATTCAAGATTGTTTGACCTCTGCTTGTAATACCGGACA 1073
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1043 TAATCACTATACAAGTTACTTCATTCAAGATTGTTTGACCTCTGCTTGTAATACTGGACA 1102
Query 1074 TGGAGCTTTTAAGGCCGAAGGATTTGCCCAT-AAATTAGACCGTAAAGGCAATGTTTCTA 1132
||||||||||||||||||||||| ||| | | || |||||||| |||||||||||| |||
Sbjct 1103 TGGAGCTTTTAAGGCCGAAGGATATGCTC-TCAAGTTAGACCGGAAAGGCAATGTTACTA 1161
Query 1133 TTGGAGAACTTACCGATGTAGATTGGCAGCATATTGAT-CTAGAAGGATTTCACAAGATG 1191
| |||||||||||||||||| ||||||||||||||||| | | |||||| |||||||||
Sbjct 1162 TAGGAGAACTTACCGATGTAAATTGGCAGCATATTGATCCCA-CAGGATTCCACAAGATG 1220
Query 1192 CTGAATTATTTAAAAGATAGGTACCCAAACATACGGATTTTCATAACCGAAAACGGTTTT 1251
|||||||||||||||||||||||||||||||| | || |||||||| ||||||||||||
Sbjct 1221 CTGAATTATTTAAAAGATAGGTACCCAAACATGCCAATGTTCATAACTGAAAACGGTTTT 1280
Query 1252 GGAGACTTGCAAAAACCTGAAACAACAGATAAAGAACTTCTACATGATACAAAAAGGATT 1311
|||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct 1281 GGAGACTTGCAAAAACCTGAAACAACGGATAAAGAACTTCTAAATGATACAAAAAGGATC 1340
Query 1312 CAATACATGAGTGGATACTTAGAAGCTCTACAAGCAGCAATGAGGGATGGAGCAAATGTG 1371
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1341 CAATACATGAGTGGATACTTAGAAGCTTTACAAGCAGCAATGAGGGATGGAGCAAATGTG 1400
Query 1372 AAGGGTTATTTTGTGTGGTCACTATTAGACAATTTTGAGTGGTTGTTCGGATACAAGGTT 1431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1401 AAGGGTTATTTTGTGTGGTCACTATTAGACAATTTTGAGTGGTTGTTCGGATACAAGGTT 1460
Query 1432 CGGTTTGGTCTATTCCATGTGGATCTGACAACACTTAAAAGAA 1474
|||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 1461 CGGTTTGGTCTATTCCATGTGGATCTAACAACTCTTAAAAGAA 1503
Score = 307 bits (166), Expect = 2e-82
Identities = 176/181 (97%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 327 GGAGGACATCCAATTAATGACTTTCCTTGGAGTGATCAGTTATAGGTTTTCAATTTCTTG 386
||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||
Sbjct 305 GGAGGACATCCAATTAATGTCTTTTCTTGGAGTGAACAGTTATAGGTTTTCAATTTCTTG 364
Query 387 GTGTAGAATCTTACCTAGAGGAAGATTTGGAGAGATTAATTATTTGGGGATAAAGTATTA 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 365 GTGTAGAATCTTACCTAGAGGAAGATTTGGAGAGATTAATTATTTGGGGATAAAGTATTA 424
Query 447 CAACAAATTGATCGATGCTCTCATTAGTAGAGGGATTAAACCATTTGTGACGTTGAACCA 506
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 425 CAACATATTTATCGATGCTCTCATTAGTAGAGGGATTAAACCATTTGTGACGTTGAACCA 484
Query 507 T 507
|
Sbjct 485 T 485
> AT1G61820.1 | Symbols: BGLU46 | beta glucosidase 46 | chr1:22835078-22838615
FORWARD LENGTH=2096
Length=2096
Score = 885 bits (479), Expect = 0.0
Identities = 840/1010 (83%), Gaps = 42/1010 (4%)
Strand=Plus/Plus
Query 539 ATATATGTTTCAAGCATTTTGGAAACCGAGTTAAATACTGGACCACGCTTAACGAACCAA 598
||||||||||||| ||||||||| ||||||||||| |||||| |||| ||||||||||||
Sbjct 913 ATATATGTTTCAAACATTTTGGAGACCGAGTTAAACACTGGATCACGATTAACGAACCAA 972
Query 599 ATCAACAAT-TAATCTTAGGC-TATCTAACAGGTAAATTTCCACC-GTCTCGTTGTTCC- 654
| |||| || ||| |||| || |||| || ||| |||||||| | | || || |||
Sbjct 973 ACCAAC-ATATAAGCTTA-GCATATCGAAGTGGTTTGTTTCCACCAG-CGCGGTGCTCCA 1029
Query 655 TCGCCATACGGGAACTGTAGC-CA-GGGAAGTTCCGAAACCGAACCTTTCATAGCCACGC 712
| ||||||||| || |||| | || ||||| || ||||| || ||||| |||||| | |
Sbjct 1030 T-GCCATACGGAAATTGTA-CTCACGGGAA-CTCAGAAACTGAGCCTTTTATAGCCGCTC 1086
Query 713 ATAACATGATCCTTGCACACGCAAAAGCGGTT-AACATATACCAG-ACCAAATATCAGAA 770
|||| |||||||| ||||| ||||| ||| || || ||||||| | ||||||||||| ||
Sbjct 1087 ATAATATGATCCTCGCACATGCAAAGGCGATTCAA-ATATACC-GAACCAAATATCA-AA 1143
Query 771 -AGAACAAAAGGGAAGCATTGGCATTGTGGTACAAACATCATGGTTTGAACCCATTAGTG 829
|||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |
Sbjct 1144 GAGAACAAAAGGGAATCATTGGCATTGTGGTACAAACATCATGGTTTGAACCCATAAGCG 1203
Query 830 AATCCAATGCGGATAAAGAA-GCTGCTGAGAGAGCTCAATCATTTTACTCTAATTGGATT 888
| || | ||| |||||| || ||||| |||||||||||||||||||| || |||||||||
Sbjct 1204 ATTCGATTGCTGATAAA-AATGCTGCCGAGAGAGCTCAATCATTTTATTCAAATTGGATT 1262
Query 889 CTCGATCCCGTTATATATGGGAAATACCCAAAAGAAATGGTAAATATTCTTGGACCAGCC 948
|| ||||||||| | ||||||||||| || |||||||||| ||| | |||||| ||||
Sbjct 1263 CTAGATCCCGTTGTGTATGGGAAATATCCGGAAGAAATGGTGAATCTACTTGGATCAGCT 1322
Query 949 TTGCCGCAATTTTCGAGCAATGAAGTGAAGAACTTAGA-GAACTCGAGAGCAGA-TTTCA 1006
||||| ||||||||||||||||| |||| | | || | || || | | |||| |||
Sbjct 1323 TTGCCAAAATTTTCGAGCAATGAAATGAACAGCCTA-ATGAGCTATAAATCAGACTTTT- 1380
Query 1007 TCGGTATTAATCACTATACAAGTTACTTCATTCAAGATTGTTTGACCTCTGCTTGTAATA 1066
| ||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||
Sbjct 1381 TGGGTATTAATCACTATACAAGTTACTTCATACAAGATTGTTTGATCACTGCTTGTAATT 1440
Query 1067 CCGGACATGGAGCTTTTAAG-GCCGAAGGATTTGCCCAT-AAATTAGACCGTAAAGGCAA 1124
| ||| | ||||||| ||| || |||||||| |||| | ||||| ||||| ||||| ||
Sbjct 1441 CTGGAGACGGAGCTTCTAAAAGC-GAAGGATTAGCCC-TCAAATTGGACCGGAAAGGAAA 1498
Query 1125 TGTTTCTATTGGAGAACTTACCGATGTAGATTGGCAGCATATTGATC-TAGAAGGATTTC 1183
|||||| || |||||||| ||||| ||| |||||||||||||||||| || | ||||| |
Sbjct 1499 TGTTTCCATCGGAGAACTGACCGACGTAAATTGGCAGCATATTGATCCTA-ACGGATT-C 1556
Query 1184 ACAA-GATGCTGAATTATTTAAAAGATAGGTACC-CAAACATACGGATTTTCATAACCGA 1241
| || |||| ||||||| ||||| ||||||||| ||| ||||| || | ||| |||||
Sbjct 1557 AGAAAGATGTTGAATTACCTAAAAAATAGGTACCACAA-CATACCAATGTACATCACCGA 1615
Query 1242 AAACGGTTTTGGAGACTTGCAAAAACCTGAAACAACAGATAAAGAACTTCTACATGATAC 1301
||| ||||| ||| | ||||||||||| || ||||||| | |||||||||| ||||||||
Sbjct 1616 AAATGGTTTCGGACAGTTGCAAAAACCAGAGACAACAGTTGAAGAACTTCTGCATGATAC 1675
Query 1302 AAAAAGGATTCAATACATGAGTGGATACTTAGAAGCTCT-ACAAGCAGCAATGAGGGATG 1360
||||||||| |||||| |||||||||| || || ||| | | ||||||||||||||||||
Sbjct 1676 AAAAAGGATACAATACTTGAGTGGATATTTGGATGCTTTGA-AAGCAGCAATGAGGGATG 1734
Query 1361 GAGCAAATGTGAAGGGTTATTTTGTGTGGTCACTATTAGACAATTTTGAGTGGTTGTTCG 1420
|||||||||||||||| ||||| | |||||||||||||| |||||||| ||||||| ||
Sbjct 1735 GAGCAAATGTGAAGGGATATTTCGCATGGTCACTATTAGATAATTTTGAATGGTTGTACG 1794
Query 1421 GATACAAGGTTCGGTTTGGTCTATTCCATGTGGATCTGACAACACTT-AAAAGAACACCG 1479
||||||||||||| ||||| |||||||| || ||| | ||||| || ||||| |||||
Sbjct 1795 GATACAAGGTTCGATTTGGGCTATTCCACGTTGATTTTACAACT-TTGAAAAGGACACC- 1852
Query 1480 AAA-CAATCAGCTTCATGGTACAAAAACTTTATCGAAG-GACACGTGAAT 1527
||| ||||||||| |||||||||| ||||| || ||| || ||||||||
Sbjct 1853 AAAGCAATCAGCTACATGGTACAAGAACTTCATTGAACAGA-ACGTGAAT 1901
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 83282704155
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5