BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475162
Length=2227
Score E
Sequences producing significant alignments: (Bits) Value
AT1G61640.1 | Symbols: | Protein kinase superfamily protein | ... 3338 0.0
AT1G11390.1 | Symbols: | Protein kinase superfamily protein | ... 1164 0.0
> AT1G61640.1 | Symbols: | Protein kinase superfamily protein
| chr1:22746372-22749184 REVERSE LENGTH=2254
Length=2254
Score = 3338 bits (1807), Expect = 0.0
Identities = 2091/2225 (94%), Gaps = 31/2225 (1%)
Strand=Plus/Plus
Query 21 AATCGCTAAATCGATAAAATAATGCTCCCGACGTTTAACGGTTTAAAGATCA-TCTCAAA 79
||||||||||||||| |||| |||||||| |||||||||||||||||||||| || ||||
Sbjct 43 AATCGCTAAATCGATGAAATTATGCTCCCAACGTTTAACGGTTTAAAGATCATTC-CAAA 101
Query 80 AACCCAACCTTTTGCGTGTTTTCTCTCGCCATGACCCTAATCTCAAGATTTTTGATATCT 139
||| ||||||||||||||| | |||||||||||||||||||||||||||||||||| |||
Sbjct 102 AACTCAACCTTTTGCGTGTCTCCTCTCGCCATGACCCTAATCTCAAGATTTTTGATCTCT 161
Query 140 AGAGTGATTAGTAGAACTCTGTTTTCGAATCAGAATAATAGAACAGCTATTAGGGTTTCT 199
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 162 AGAGTGATTAGTAGAACTCTGTTTTCGAATCAGAATAATAGAACAGCTATTAATGTTTCT 221
Query 200 GTTAGGTTGCCACAGTTCAGAATTCAGAGTAATGGATATCACACATTGGGTCTTCTTCAT 259
|| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 222 GTAAAGTTGCCACAATTCAGAATTCAGAGTAATGGATATCACACATTGGGTCTTCTTCAT 281
Query 260 AATGTTAAAGGAAGGTTTTT--G-AGTAATCATCAT--G-TCGCGCGGAGGAGCTATTCG 313
|||||||||||||||||||| | |||||||||||| | | ||||| ||||||||||||
Sbjct 282 AATGTTAAAGGAAGGTTTTTAGGTAGTAATCATCATCAGCTTGCGCGTAGGAGCTATTCG 341
Query 314 ATTGCA-TCTGCGAGTAATGTAGTTAAGCAACATGCTCAAGTCTCTTGGGGAAGGCTTCT 372
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 342 ATTGCAGT-TGCGAGTAATGTAGTTAAGCAACATGCTCAAGTCTCTTGGGGAAGGCTTGT 400
Query 373 ACAGAGAGTAACTTTGAATCGTAGTTGGAACTTACCTCGTATAAGTCAGATTGCTCAAGC 432
||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct 401 ACAGAGAGTAACTCTGAGTCGTAGTTGGAACTTACCTCGGATAAGTCAGATTGCTCAAGC 460
Query 433 GTTTAGCTTGTCTTTAGCCCGTTCGCACTTGTTGTTACCCGGTTTCTTGGCTCTTACTTG 492
|| ||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |
Sbjct 461 GTGTAGCTTGTCTTTAGCCCGTTCGCACTTCTTGTTACCTGGTTTATTGGCTCTTACCTA 520
Query 493 TAGACAAGTGGCATATGCGCAAAGGGTGGCTCCAAGTCCTGTCATTTATTCTCCTTCACA 552
|||||||||||| |||||||||||||||| ||||| |||||| | ||||||||||||||
Sbjct 521 TAGACAAGTGGCGTATGCGCAAAGGGTGGTTCCAAATCCTGTGGTCTATTCTCCTTCACA 580
Query 553 CGTTTCTTCTTATAGGCGTTCGATAAACTTCCCTATCATTATCTCGTCTTTATTGTTTTC 612
| ||||| |||||||| |||||||||||||||||||| || ||||||||||| |||||||
Sbjct 581 CATTTCTCCTTATAGGAGTTCGATAAACTTCCCTATCGTTCTCTCGTCTTTAGTGTTTTC 640
Query 613 TGCGGTCAAAGGTGTTGTTCTGATTGGGAGAGCTCTCTATTTAGCATTTTTGTTTTCTCC 672
||||||||| |||||||||||||| ||||||||||| ||||||||| |||||||||||||
Sbjct 641 TGCGGTCAAGGGTGTTGTTCTGATCGGGAGAGCTCTTTATTTAGCAATTTTGTTTTCTCC 700
Query 673 AAATGTTATAATGGCTTTGTTGGGATTTG-TGTGCGGGCCTCGTTACAGAAAGCTGCAGT 731
||||||||| ||||| ||||||||||||| | |||||||||||||||||| |||||||||
Sbjct 701 AAATGTTATTATGGCGTTGTTGGGATTTGCT-TGCGGGCCTCGTTACAGACAGCTGCAGT 759
Query 732 ATGAGGTCCTCCATCGAACTTTGGA-AAGAGCAGGTCCTGCTTTTATCAAATTTGGCCAA 790
|||||||||||||||||||| |||| || ||||||||||||||||||||||||||| |||
Sbjct 760 ATGAGGTCCTCCATCGAACTCTGGAGAA-AGCAGGTCCTGCTTTTATCAAATTTGGTCAA 818
Query 791 TGGATTGCCACACGACCTGATCGCTTTAACAAGGATTTGTGTTTGCAGCTTTCAAAGCTT 850
|||||||| || ||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 819 TGGATTGCTACGCGACCTGATCGGTTTAATAAGGATTTGTGTTTGCAGCTTTCAAAGCTT 878
Query 851 CACAGTAATGCTCCTGAGCACAGTTTTGCGTTCACCAAAAAGAGCATCGAAACTGCATTT 910
||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct 879 CACAGTAATGCTCCTGAGCACAGTTTTGCGTTCACCAAAAAGAGCATTGAAAATGCATTT 938
Query 911 GGTCGTAAACTCTCTGAAATATTTGAGGAATTTGATGAGGCGCCAGTGGCATCTGGGAGT 970
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 939 GGTCGTAAACTCTCTGAGATATTTGAGGAATTTGATGAGGCGCCAGTGGCATCTGGGAGT 998
Query 971 ATAGCTCAAGTACACCGAGCTTCCTTGAAGTTTCAGTATCCAGGACAAAAGGTGAAGTCT 1030
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 999 ATAGCTCAAGTACACCGAGCTTCCTTGAAGTTTCAGTATGCAGGACAAAAGGTGAAGTCC 1058
Query 1031 TCGGAAGTTGCTGTTAAAGTTAGACATCCTTGTGTTGAGGAAACGATGAAGCGAGATTTT 1090
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1059 TCGGAAGTTGCTGTGAAAGTTAGACATCCTTGTGTTGAGGAAACGATGAAGCGAGATTTT 1118
Query 1091 GTGATAATTAATTTTGTGGCAAAGCTAACTACTTTTATTCCGGGGCTGAATTGGCTTAGA 1150
|||||||||||||| ||||| | |||||| ||||||||||||||| | ||||||||||||
Sbjct 1119 GTGATAATTAATTTCGTGGCGAGGCTAACCACTTTTATTCCGGGGTTAAATTGGCTTAGA 1178
Query 1151 TTGGACGAGTGTGTGCAACAGTTTAGTGTCTACATGTTGTCCCAAGTTGATCTCTCAAGG 1210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1179 TTGGACGAGTGTGTGCAACAGTTTAGTGTCTACATGTTGTCCCAAGTTGATCTCTCAAGG 1238
Query 1211 GAAGCTTCTCATTTGAGTCGGTTTATTTATAACTTCCGTGGATGGAAAGATGTCTCTTTT 1270
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1239 GAAGCTTCTCATTTGAGTCGGTTTATATATAACTTCCGTGGATGGAAAGATGTCTCTTTT 1298
Query 1271 CCTAAGCCCATCTATCCGCTTATACATCCCGCTGTTTTGGTCGAGACGTATGAGCACGGA 1330
||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||
Sbjct 1299 CCTAAGCCCATCTATCCTCTAATACATCCCGCTGTTTTAGTCGAGACGTATGAGCACGGA 1358
Query 1331 GAGAGCGTGGCTCGTTATGTCGATGGCTCAGAAGGACATGAAAGGCTTAAGGCTAAAGTA 1390
||||| |||||||||||||| |||||||| |||||||| |||| |||||||||||||||
Sbjct 1359 GAGAGTGTGGCTCGTTATGTTGATGGCTCCGAAGGACAAGAAAAACTTAAGGCTAAAGTA 1418
Query 1391 GCTCATATCGGAACTCATGCTCTCTTGAAAATGCTCCTGGTCGACAACTTCATTCATGCT 1450
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1419 GCTCATATCGGAACTAATGCTCTCTTGAAAATGCTCCTGGTCGACAACTTCATTCATGCT 1478
Query 1451 GATATGCATCCTGGGAATATTCTTGTCCGGCCAAACAATACTCGAAGAGGTCTTTTCAGA 1510
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 1479 GATATGCATCCTGGGAATATTCTTGTCCGGCCAAACAATACTAGAAGAGGTCTATTCAGA 1538
Query 1511 TCAAGGAAGCCACACATTGTTTTCCTAGATGTGGGCATGACTGCGGAACTCTCAAAAATT 1570
|| |||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| |
Sbjct 1539 TCGAGGAAGCCACACATCGTTTTCCTAGATGTGGGCATGACTGCAGAACTTTCAAAAACT 1598
Query 1571 GACCGAGATAACCTACTCGGGTTTTTCAAGGCAGTTGCACGTAGAGACGGCCGGACTGCT 1630
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 1599 GACCGAGATAACCTACTCGGATTTTTCAAGGCCGTTGCACGTAGAGACGGCCGGACTGCT 1658
Query 1631 GCTGAACGAACACTTAAATTATCTAAACAACAGAATTGTCCTAATCCTCAGGCCTTTATC 1690
|||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct 1659 GCTGAACGAACACTTAAATTATCTAAACAACAGAATTGTCCTGATCCACAGGCCTTTATC 1718
Query 1691 AAGGAAGTAGAAGATGCATTTACATTCTGGGGAACAGAGGAAGGAGATCTAGTCCATCCA 1750
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1719 AAGGAAGTAGAAGAAGCATTTACATTCTGGGGAACAGAGGAAGGGGATCTAGTCCATCCA 1778
Query 1751 GCGGATTGTATGCACGAACTATTCGAGAAAATGAGGCGTCATAGAGTTAATATCGACGGC 1810
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1779 GCGGATTGTATGCACGAACTATTCGAGAAAATGAGGAGTCATAGAGTTAATATCGACGGC 1838
Query 1811 AATGTATCCACCGTGATGTTTACAACATTAGTTCTCGAGGGTTGGCAACGGAAACTTGAT 1870
||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1839 AATGTGTCCACCGTCATGTTTACAACATTAGTTCTCGAGGGTTGGCAACGGAAACTGGAT 1898
Query 1871 CCGGGATACGATGTGATGCGTACGCTACAAACAATGCTGCTGAAAACGGATTGGATGAAA 1930
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1899 CCAGGATACGATGTGATGCGTACGCTACAAACAATGCTGCTGAAAACGGATTGGATGAAA 1958
Query 1931 TCACTTTCTTACACGATCGATGGACTGATGGCTCCGTAGATTGAAAAGGTTCAATCtttt 1990
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1959 TCACTTTCTTACACGATCGATGGACTTATGGCTCCGTAGATTGAAAAGGTTCAATCTTTG 2018
Query 1991 attcttttacccattttaactttttgagagccacattttgttttttGTTGCCTTAGGATG 2050
|||||||||||||||| ||| || |||||||||||||| | ||||||||||||||||||
Sbjct 2019 ATTCTTTTACCCATTT-AACACTT-GAGAGCCACATTTT-TGTTTTGTTGCCTTAGGATG 2075
Query 2051 TGAAGAA---CGAAAACATATATTTTAGAGAAAAACAAAAGAAAAGTCGtttt-t-tttg 2105
||||||| | ||||||||||||||||||||||||||| |||||||| ||| | |||
Sbjct 2076 TGAAGAAGAACCAAAACATATATTTTAGAGAAAAACAAAGGAAAAGTCCTTTACTGTTT- 2134
Query 2106 tgtcttcttcttttcttttgcttattctttaatt-tt-ttATTGCTGGAAATTGGAATTC 2163
|||||||||||| ||||||||||||||||| ||| || || ||||| |||||||||||||
Sbjct 2135 TGTCTTCTTCTTATCTTTTGCTTATTCTTTGATTATTCTTTTTGCTAGAAATTGGAATTC 2194
Query 2164 TTCATCATTCTAAAAACAGAGAATTTGTATTTTGTGCGGTATATAT-AGGTTTTGAATTT 2222
||||||||||||||| |||||||||||||||||| | | ||||||| || ||||||||||
Sbjct 2195 TTCATCATTCTAAAA-CAGAGAATTTGTATTTTG-G-G-TATATATCAG-TTTTGAATTT 2249
Query 2223 CCTCG 2227
|||||
Sbjct 2250 CCTCG 2254
> AT1G11390.1 | Symbols: | Protein kinase superfamily protein
| chr1:3834459-3837629 REVERSE LENGTH=2502
Length=2502
Score = 1164 bits (630), Expect = 0.0
Identities = 1293/1606 (81%), Gaps = 73/1606 (5%)
Strand=Plus/Plus
Query 422 ATTGCTCAAGCGTTTAGCTTGTCT-TTAGCCCGTTCGCACTTGTTGTTACCCGGTTTC-T 479
|||||||| ||||||||||||||| ||| |||||||||||||||| |||| || || |
Sbjct 652 ATTGCTCAGGCGTTTAGCTTGTCTCTTA-CCCGTTCGCACTTGTTAATACCTGGGATCGT 710
Query 480 TGGCTCTTACTTGTAGACAAGTGGCATATGCGCAAAGGGTGGCTCCAAG-TC-CTG-TCA 536
| ||| | |||||| ||||||| |||| || |||| | ||||| | || | | |
Sbjct 711 T-GCTGTCACTTGTGGACAAGTAGCATGGGCACAAA--G-AGCTCCTGGTTCGGGGATAA 766
Query 537 TTTATTCTCCTTCACACGTTTCT-TCT-TA-TAGGCGTTCGATAAACTTCCCTATCATTA 593
| | | | ||||| | ||| ||| || ||| | | | || | |||||| ||
Sbjct 767 ATCACTATGCTTCAGATAAATCTCTCTATACAAGG-GCT-AAGAATGGT-CCTATCTTTC 823
Query 594 TCTCGTCTTTATTGTTTTCTGCGGTCA-A-AGGTGTTGT-TC-TGATTGGGAGAGCTCTC 649
| || || |||||| ||| | |||| | | ||| ||| | || |||||||||| ||| |
Sbjct 824 TGTCTTCGTTATTG-TTT-T-CGGTTATAGAGG-GTTTTATCTTGATTGGGAGGGCTTTT 879
Query 650 TATTTAGCATT-TTTGTTTTCTCCAAATGTTATAAT--GGCTTTGTTG-GGATTTGTGTG 705
||| |||| || ||||||| |||| | | || | || ||| | |||| ||| | |||
Sbjct 880 TATATAGC-TTGTTTGTTTACTCCTACTATTCTGATGGGGC-TGGTTGTGGAATCATGT- 936
Query 706 CGGGCCTCGTTACA-G-AAAGCT-GCAGTATGAGGTCCTCCATCGAACTTTGGAAAGAGC 762
|||||||||| | | ||| | || | |||| | ||||||||||| ||||||||||
Sbjct 937 -GGGCCTCGTTTTAGGAAAATATGGC--T-TGAGATGGTCCATCGAACTCTGGAAAGAGC 992
Query 763 AGGTCCTGCTTTTATCAAATTTGGCCAATGGATTGCCACACGACCTGATCGCTTTAACAA 822
|||||||||||||||||||| || |||||| ||||| |||||||||| || |||
Sbjct 993 AGGTCCTGCTTTTATCAAATGGGGTCAATGGGCAGCCACGCGACCTGATCTATTCCCCAA 1052
Query 823 GGATTTGTGTTTGCAGCTTTCAAAGCTTCACAGTAATGCTCCTGAGCACAGTTTTGCGTT 882
||||||||||| ||||| ||||||||||||||||||||||||||||| || || || |
Sbjct 1053 GGATTTGTGTTCACAGCTCTCAAAGCTTCACAGTAATGCTCCTGAGCATAGCTTCGCCTA 1112
Query 883 CACCAA-AAAGAGC-ATCGA-AACTGCATTTGGTCGTAAACTCTCTGAAATATTTGAGGA 939
||| || ||| | | ||||| || ||||||||||||||||| ||||| |||||||||||
Sbjct 1113 CACTAAGAAA-A-CTATCGAGAA-GGCATTTGGTCGTAAACTTTCTGAGATATTTGAGGA 1169
Query 940 ATTTGATGAGGCGCCAGTGGCATCTGGGAGTATAGCTCAAGTACACCGAGCTTCCTTGAA 999
|||||||||| ||||||||||||||||||||| || |||||||| |||||| ||| ||
Sbjct 1170 GTTTGATGAGGTGCCAGTGGCATCTGGGAGTATTGCCCAAGTACATAGAGCTT-CTTTAA 1228
Query 1000 -GTTTCAGTATCCAGGACAAAAGGT-GAAGTCTTCGGAAGTTGCTGTTAAAGTTAGACAT 1057
||||||||||||||||||||| || ||||||||| ||||| |||||||||||||||
Sbjct 1229 GGTTTCAGTATCCAGGACAAAA-GTCCAAGTCTTCGCTGGTTGCGGTTAAAGTTAGACAT 1287
Query 1058 CCTTGTGTTGAG-GAAACGATGAAGCGAGATTTTGTGATAATTAATTTTGTGGCAAAGCT 1116
|| |||||| | ||| |||| | | |||||||||||||||||||||| ||||||||| |
Sbjct 1288 CCGGGTGTTG-GTGAATCGATTAGGAGAGATTTTGTGATAATTAATTTGGTGGCAAAGAT 1346
Query 1117 AACTACTTTTATTCCGGGGCTGAATTGGCTT-AGATTGGACGAGTGTGTGCAACAGTTTA 1175
| | ||||| ||||| | |||| ||| || |||||||||||| ||||||||||||||
Sbjct 1347 ATCGACTTTAATTCCAGCTTTGAAATGG-TTGAGATTGGACGAGAGTGTGCAACAGTTTG 1405
Query 1176 GTGTCTACATGTTGTCCCAAGTTGATCTCTCAAGGGAAGCTTCTCATTTGAGTCGGTTTA 1235
|||||| ||||||||| |||||||||||| | ||||||||||| |||||||||||||| |
Sbjct 1406 GTGTCTTCATGTTGTCTCAAGTTGATCTCGCGAGGGAAGCTTCACATTTGAGTCGGTTCA 1465
Query 1236 TTTATAACTTCCGTGGATGGAAAGATGTCTCTTTTCCTAAGCCCATCTATCCGCTTATAC 1295
| |||||||||||| ||||||| ||||||||||| ||||| || | ||||| ||| |||
Sbjct 1466 TATATAACTTCCGTAGATGGAAGGATGTCTCTTTCCCTAAACCTGTGTATCCTCTTGTAC 1525
Query 1296 ATCCCGCTGTTTTGGTCGAGACGTATGAGCACGGAGAGAGCGTGGCTCGTTATGTCGATG 1355
|||| ||||||||||| ||||| |||||||| ||||| || ||||| |||||||| ||||
Sbjct 1526 ATCCTGCTGTTTTGGTGGAGACATATGAGCATGGAGAAAGTGTGGCACGTTATGTTGATG 1585
Query 1356 G-CTCAGAAGGACATGAAAGGCTTAAGGCTAAAGTAGCTCATATCGGAACTCATGCTCTC 1414
| | |||||||||||| || ||||| ||| | | ||||| ||||| || ||||| |||
Sbjct 1586 GAAT-GGAAGGACATGAATGGATTAAGACTAGATTGGCTCACATCGGGACCCATGCCCTC 1644
Query 1415 TTGAAAATGCTCCTGGTCGACAACTTCATTCATGCTGATATGCATCCTGGG-AATATTCT 1473
||||| |||||| |||| || ||||| ||||| ||||| |||||||| ||| ||||| ||
Sbjct 1645 TTGAAGATGCTCTTGGTTGATAACTTTATTCACGCTGACATGCATCC-GGGAAATATCCT 1703
Query 1474 TGTCCGGCCAAACAATACTCGAAGAGGTCTTTTCAGATC-AAGGAAGCCACACATTGTTT 1532
||||||| ||| | | || |||| ||||||| | | || |||||| ||||||||||
Sbjct 1704 TGTCCGGAAAAAGGCTTCCCGTGGAGGCCTTTTCAAAACGAA-GAAGCCTCACATTGTTT 1762
Query 1533 TCCTAGATGTGGGCATGACTGCGGAACTCT-CAAA-AATTGACCGAGATAACCTACTCGG 1590
|||| |||||||| |||||||| ||||| | |||| || ||||||||| ||| |||| |
Sbjct 1763 TCCTTGATGTGGGAATGACTGCAGAACT-TGCAAAGAA-TGACCGAGAGAACTTACTTGA 1820
Query 1591 GTTTTTCAAGGCAGTTGCACGTAGAGACGGCCGGACTGCTGCTGAACGAACACTTAAATT 1650
||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 1821 CTTTTTCAAGGCGGTTGCGCGTAGAGATGGCCGGACTGCTGCTGAACGAACACTTAAATT 1880
Query 1651 ATCTAA-ACAA-CAGAATTGTCCTAATCCTCAGGCCTTTATCAAGGAAGTAGAAGATGCA 1708
||| || | || ||||||||||| ||||| |||| |||||| |||||||||| || |||
Sbjct 1881 ATC-AAGA-AAGCAGAATTGTCCCAATCCAGAGGCTTTTATCGAGGAAGTAGAGGAAGCA 1938
Query 1709 TTTACATTCTGGGGAACAGAGGAAGGAGATCTAGTCCATCCAGCGGATTGTATGCACGAA 1768
|| | |||||||||||| || |||||| |||| |||||||| |||||||||||||||
Sbjct 1939 TTCAAATTCTGGGGAACCCCTGAGGGAGATTTAGTACATCCAGCAGATTGTATGCACGAA 1998
Query 1769 CTA-TTCGAGAAAATGAGGCGTCATAGAGTTAATATCGACGGCAATGTATCCACCGTGAT 1827
|| || |||||| | || ||||||||||| ||||| || || ||||| | ||| || ||
Sbjct 1999 TTACTT-GAGAAAGTAAGACGTCATAGAGTAAATATTGATGGGAATGTGTGCACTGTTAT 2057
Query 1828 GTTTACAACATTAGTTCTCGAGGGTTGGCAACGGAAACTTGATCCGGGATACGATGTGAT 1887
| | |||||||||||||||||||||||||||||||||||||| || ||||| ||||||||
Sbjct 2058 GGTGACAACATTAGTTCTCGAGGGTTGGCAACGGAAACTTGACCCAGGATATGATGTGAT 2117
Query 1888 GCGTACGCTACAAACAATGCTGCTGAAAACGGATTGGA-TGAAATCACTTTCTTACACGA 1946
|| ||| | ||||||||| || ||||||| || ||| | || || |||||||| |||
Sbjct 2118 GCACACGTTGCAAACAATGGTGTTGAAAACCGACTGGGCT-AAGTCTCTTTCTTATACGG 2176
Query 1947 TCGATGGACTGATGGCTCCGTAGATTGAA-AA-GGTTCAATCtttt 1990
| ||||| |||||||| |||||| ||| || ||||| |||||||
Sbjct 2177 TGGATGGTCTGATGGCGCCGTAGGC-GAAGAAAGGTTCCATCTTTT 2221
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 110491399545
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5