BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475211
Length=4353
Score E
Sequences producing significant alignments: (Bits) Value
AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein /... 6556 0.0
AT1G11100.2 | Symbols: | SNF2 domain-containing protein / heli... 804 0.0
> AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein
/ helicase domain-containing protein / zinc finger protein-related
| chr1:22534717-22540850 REVERSE LENGTH=4404
Length=4404
Score = 6556 bits (3550), Expect = 0.0
Identities = 4133/4406 (94%), Gaps = 73/4406 (2%)
Strand=Plus/Plus
Query 1 CCCAACTGCTCTCTACCTTTCCTGGAAAATTCCTTCAAAACCCAATTCACAAGCCTTCTT 60
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct 7 CCCAACTGCTCTCTACCTTTCCTCGAAAATTCCTTCAAAACCCAATTCTCAAGCCTTCTT 66
Query 61 C-T--TCATACCTGAAAATTCTCA-AATCTCTGGATCTACTCTTCAACTTCTGAATTTCG 116
| | || |||||||||||||| | ||||||||||||||| | || ||||||||||||||
Sbjct 67 CTTCGTCGTACCTGAAAATTCT-ACAATCTCTGGATCTACGCGTCTACTTCTGAATTTCG 125
Query 117 A-TTGGGTTTTCCGGTAGGT-AAATTCCGTGACTTTTGGGTTTTCCGATTTAGGGTTTG- 173
| |||||||| |||| || | |||||||||||||||||||||||| |||||||||||||
Sbjct 126 ATTTGGGTTTCCCGGGAGCTGAAATTCCGTGACTTTTGGGTTTTCTGATTTAGGGTTTGT 185
Query 174 T--T-TAATC--TC-TTCTC------G---------TCCTTTCTCG-GGTTAGTGATGGG 211
| | | || || ||||| | | ||| | | | || |||||||
Sbjct 186 TCCTCTTCTCGTTCTTTCTCGGGTTAGTTTTTTTTTTTTTTTTTTGTGATTTTTGATGGG 245
Query 212 TGAGGAAGGTTCAGTGTTTGGTATGGGAGATGAATTTCAC-GTTGATGATTGTGATGGTG 270
||||||||||||| |||||||| |||||| |||||||| | |||||||||||||||||||
Sbjct 246 TGAGGAAGGTTCAATGTTTGGTCTGGGAGGTGAATTTC-CGGTTGATGATTGTGATGGTG 304
Query 271 GTTTTGAGTTTGAAGATGATGACGAGACTATTGACATCGAAACGCTTTATCGGATTCTAG 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 305 GTTTTGAGTTTGAAGATGATGACGAGACTATTGACATCGAAACGCTTTATCGGATTCTAG 364
Query 331 ATGAGAAGCCTGATTCTGCTGAGGGTAGCCAAGAAAATTTATCACCAGTTGGTTCATCTG 390
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 365 ATGAGAAGCCTGATTCTGCTGAGGGTAGCCAAGAAAACTTATCACCAGTTGGTTCATCTG 424
Query 391 CTGACGAGCTCAAGGATTCACACTTGCAAAATGGTTCATTTGATGAACATGTGAAAATGG 450
|||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct 425 CTGACGAGCTCAAGGATTCACAGTTGCTAAATGGTTCATTTGATGAACATGTGAAAATGG 484
Query 451 AAGCCGGGCTGAGTCCTTCACCTGCTCATACTTGCTCTGCAAGTCTTAAAGATTGGTTTT 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 485 AAGCCGGGCTGAGTCCTTCACCTGCTCATACTTGCTCTGCAAGTCTTAAAGATTGGTTTT 544
Query 511 CGTTAAGTCAGGGTGAGCAGCCTGTGGAAACATGTGGAGTATCTCAATCTGAGATGACTA 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 545 CGTTAAGTCAGGGTGAGCAGCCTGTGGAAACATGTGGAGTATCTCAATCTGAGATGACTA 604
Query 571 GTTGTAGTATATCGTCTAGTTTCTCTGATCATGATGGCAATATGATGGTCTTCAATCC-- 628
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 605 GTTGTAGTATATCGTCTAGTTTCTCTGATCCTGATGGCAATATGATGGCCTTCAATCCTG 664
Query 629 TGACACTGTTTCCAAG-CA-AGATGACAAG-ATAATTGATTCCAAATTTACATCGCGCA- 684
||| | ||| | | || | | |||| | | ||| | || || || || |
Sbjct 665 TGA-ATTGTGACGTTGACACTGTTTCCAAGCAGGA-TGA-T---AAGATA-AT--CG-AT 714
Query 685 GCCCCA-CAATGGCGACTCCATATTTTGACGATGTGCCTGGATACGGAGTGGGGTTGGGA 743
|| | | ||| |||||||||||||||| | ||| |||||||||||||||||||||||
Sbjct 715 TCCAAATCTATGTTGACTCCATATTTTGACAACGTGACTGGATACGGAGTGGGGTTGGGA 774
Query 744 GCCAATCATAATTCCTCTGTCATGTCTGGTTTTTTAAATAATTCCAATTCTCTCAGTGAC 803
|||||||||||||| |||| |||||||| |||||| |||||||||||||| |||||||||
Sbjct 775 GCCAATCATAATTCGTCTGCCATGTCTGTTTTTTTTAATAATTCCAATTCCCTCAGTGAC 834
Query 804 AGTGCGGATAACTATGTCTCTTCTGCACAAGATTGCTACAATACAAGTGGAACATCCTTG 863
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 835 AGTGCGGATAACTATGTCTCTTCTGCACAAGATTGCTACAATACAAGTGGTACATCCTTG 894
Query 864 TCAGACCATACCCCCAATTTTGTCCAGAATTTCGCGTTTCAGTTCTTTCCTAATAAAGAA 923
||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||
Sbjct 895 TCAGACCATACCCCCAATTCTGTTCAGAATTTCGCGTTTGAGTTCTTTCCTAATAAAGAA 954
Query 924 GAAGCTGTAATTGATGTTGAGAGTGGAGTAAGTGAGTCTCAGTCGGATGGTGCCAGCCGG 983
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 955 GAAGCTGTAAATGATGTTGAGAGTGGAGTAAGTGAGTCTCAGTCGGATGGTGCCAGCCGG 1014
Query 984 ATGATTTTTGATAGACATGGCAGAGTGGATCATGGATCTTTAGAAAGTAAACCTCCTATT 1043
|||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||
Sbjct 1015 ATGATTTTTGATAGACATGGAAGAGTGGATAATGGATCTTTAGAAAGGAAACCTCCTATT 1074
Query 1044 GATTTTTCTAGTGCAAGAGGGATCAGTTTCAAGTTTGAAAGTAATCCTTCAGTTTCTCCT 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1075 GATTTTTCTAGTGCAAGAGGGATCAGTTTCAAGTTTGAAAGTAATCCTTCAGTTTCTCCT 1134
Query 1104 GCCTGTGTCAAACCGTACAACAGTTTTGACAGTCATTTAGCTGATAATGACCTTGACCGG 1163
|||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1135 GCCTGTGTCAAACCCTACAACAGTTTTGACAGTCATTTAGCTGATAGTGACCTTGACCGG 1194
Query 1164 CCTGATAATTATTCAAGCAGTTTTCAGGATAATAAAGCTGTTCATGTGACGGTTAAACCA 1223
||| ||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||
Sbjct 1195 CCTAATAATTATTCATGCAGTTTTCAGGATAATAAAACTGTTCATGTGAAGGTTAAACCA 1254
Query 1224 GAGGTTGAGTCAGAGAAAGTGGTCTACAGTTCAGTTCCAGGGGAATATAGTGTCAGGGAC 1283
|||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct 1255 GAGGCTGAATCAGAGAAAGTTGTCTACAGTTCAGTTCCAGGGGAATTTAGTGTCAGGGAT 1314
Query 1284 GATGCTTATGTTTCTGGAGAAACCAATCCTTGGTGGTCTGGTGCATCAAGCTCTGCAGCC 1343
||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 1315 GATGCTTATCTTTCTGGAGAAACCAATCGTTGGTGGTCTGGTGCATCAAGCTCTGCAGTC 1374
Query 1344 TCCTATCAAACAGATATTGAGAAAGGATACTCGTATATGGCACATCAAACAGCTCTACCT 1403
|||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||
Sbjct 1375 TCCTATCAAACAGATATTGAAAAAGGATACTCATATATGGCACCGCAAACAGCTCTACCT 1434
Query 1404 AACCAAGACAGTGGCGATAGAAGCTCCAATCATTTTTATGATTCAGATACATTTTTGCAA 1463
| ||||||||||||| | | |||||||||||||||||| ||||||||||||| |||||||
Sbjct 1435 AGCCAAGACAGTGGCAAGATAAGCTCCAATCATTTTTACGATTCAGATACATGTTTGCAA 1494
Query 1464 TATGTTGCAGAAGATCCCAGCCCAGTGACACAAAGCAATGAGTATTTAGACTCTCAAATT 1523
||||||| |||||||||||||||||||||||||| |||||||||| ||||| |||||||
Sbjct 1495 TATGTTGTAGAAGATCCCAGCCCAGTGACACAAAACAATGAGTATAAAGACTTTCAAATT 1554
Query 1524 ---CAAGGGGGCCGTGAATATGTTCAACCGAGGGGCATTGATTCT-AATTTCTCAAATGC 1579
||||| | ||| |||||| ||||||||||||||||||||||| || |||||||||||
Sbjct 1555 CAACAAGGAGACCGGGAATATATTCAACCGAGGGGCATTGATTCTCAA-TTCTCAAATGC 1613
Query 1580 CAGCTTTGAATCAGTTCAAAGTCATTCTTCAGAATGTATATCCGATAGTGATGATGATTC 1639
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1614 CAGCTTTGAATCAGTTCAAAGCCATTCTTCAGAATGTATATCCGATAGTGATGATGATTC 1673
Query 1640 TGACATCTGTATAATAGAACC-TATTGGCCAATCTGCAATCCCACATCGACCTCTAGCTA 1698
|||| |||| ||||||||||| || ||| |||||||||||||||||||||||||||||||
Sbjct 1674 TGACGTCTGCATAATAGAACCTTA-TGGTCAATCTGCAATCCCACATCGACCTCTAGCTA 1732
Query 1699 TGAAAAAGCCGCTAGTTTCTTCAGAATATTCTACAGTTGGTCATAATTACAATCAATCTG 1758
|||||| |||| |||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct 1733 TGAAAATGCCGGTAGTTTCTTCAGAATATTCTACAGTTAGTCATAATTTTAATCAATCTG 1792
Query 1759 GAGGCCTGAAGCTTCAGTCAAATAAAGAAAATATGATCTTTCAAGCTGCATTGCAGGATC 1818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1793 GAGGCCTGAAGCTTCAGTCAAATAAAGAAAATATGATCTTTCAAGCTGCATTGCAGGATC 1852
Query 1819 TCACTCAGCCTAATTCTGAAGCAAGTCCGCCTGATGGTGTCTTGACAGTCCCGCTTCTGA 1878
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 1853 TCACTCAGCCTAATTCTGAAGCAATTCTGCCTGATGGTGTCTTGACAGTCCCGCTTCTGA 1912
Query 1879 GACATCAGCGAATTGCATTGTCATGGATGGCCCAGAAGGAGACAAGTGGCTTCCCCTGTT 1938
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1913 GACATCAGCGAATCGCATTGTCATGGATGGCCCAGAAGGAGACAAGTGGCTTCCCCTGTT 1972
Query 1939 CGGGAGGAATTCTTGCTGATGATCAGGGTCTTGGGAAGACAGTTTCCACTATAGCTCTTA 1998
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1973 CGGGTGGAATTCTTGCTGATGATCAGGGTCTTGGGAAGACAGTTTCCACTATAGCTCTTA 2032
Query 1999 TACTGAAGGAAAGGTCTAAACCTGCCCAAACATGTGAAGAAAGTATGAAAAAAGAAATTT 2058
||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||
Sbjct 2033 TACTGAAGGAAAGGTCTAAACCTGCCCAAGCATGTGAAGAAAGTACGAAGAAAGAAATTT 2092
Query 2059 TTGACCTAGAAAGTGAGAGTGGAGAATGTGCACCTTTAAAGA-CCAGTGGAAGAAGTGAG 2117
||||||||||||| |||| |||||||||||| |||||||| | ||||||||||||| ||
Sbjct 2093 TTGACCTAGAAAGCGAGACTGGAGAATGTGCGCCTTTAAA-ACCCAGTGGAAGAAGCAAG 2151
Query 2118 CATTTTGAACACTCTCAATTGCTTTCCAATGAAAACAAAGTTGGTCGAGATAGTGTGGGT 2177
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct 2152 CATTTTGAACACTCTCAATTGCTTTCCAATGAAAACAAAGTTGGTGGAGACAGTGTGGGT 2211
Query 2178 AAAGTGAGGGGAAGGCCAGCTGCTGGAACGCTTGTTGTCTGTCCCACTAGTGTTATGCGG 2237
||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2212 AAAGTGACGGGAAGGCCAGCTGCTGGAACGCTTGTTGTATGTCCCACTAGTGTTATGCGG 2271
Query 2238 CAGTGGGCTGATGAATTACATAAGAAGGTGACTAGTGAAGCGAATCTCTCTGTTCTGGTA 2297
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2272 CAGTGGGCTGATGAATTACATAAGAAGGTGACTAGTGAAGCAAATCTCTCTGTTCTGGTA 2331
Query 2298 TACCATGGGTCTAGTAGAACAAAGGATCCTTATGAGTTGGCTAAATATGATGTTGTTGTT 2357
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2332 TACCATGGGTCTAGCAGAACAAAGGATCCTCATGAGTTGGCTAAATATGATGTTGTTGTT 2391
Query 2358 ACCACATTTTCTATTGTAAGTATGGAAGTTCCAAAGCAGCCTCTTGTTGATGATGAGGAC 2417
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2392 ACCACATTTTCTATTGTAAGTATGGAAGTGCCAAAGCAGCCTCTTGTTGATGATGAGGAT 2451
Query 2418 GAAGAGAAGGATGGTGTACAGGATGGTGGAACTGCAGCTACTGGCTTTTGCTCAAACAAG 2477
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2452 GAAGAGAAGGATGGTGTACATGATGGTGGAACTGCAGCTACTGGCTTTTGCTCAAACAAG 2511
Query 2478 AAAAGGAAATATCCTCCGGATTCTAAAAAGAGGGGCTCAAAGAAGAAGAAACAAGTTGAG 2537
||||||||||||||||| ||||||||||||| ||| |||||||||||| | ||||||||
Sbjct 2512 AAAAGGAAATATCCTCCCGATTCTAAAAAGAAGGGTTCAAAGAAGAAG--A-AAGTTGAG 2568
Query 2538 TTTCTGTCTGGCCCTCTTGCGAAAGTTTCATGGTTTAGAGTTGTTCTAGATGAGGCACAG 2597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2569 TTTCTGTCTGGCCCTCTTGCGAAAGTTTCATGGTTTAGAGTTGTTCTAGATGAGGCACAG 2628
Query 2598 AGCATTAAGAATTACAAAACCCAAGTTGCAAGAGCATGCTGGGGCCTTCGTGCTAAACGG 2657
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2629 AGCATTAAAAATTACAAAACCCAAGTTGCAAGAGCATGCTGGGGCCTTCGTGCTAAACGG 2688
Query 2658 AGGTGGTGTTTGTCTGGCACTCCAATCCAGAATTCAATCGATGACCTCTACAGCTACTTT 2717
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2689 AGGTGGTGTTTGTCTGGCACTCCAATCCAGAATTCAATCGATGACCTTTACAGCTACTTT 2748
Query 2718 CGATTCCTCAAATATGATCCTTATTCTTCCTACGTATTGTTCTGTAGCACGATTAAGAAC 2777
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2749 CGATTCCTCAAATATGATCCTTACTCTTCCTACGTATTGTTCTGTAGCACGATTAAGAAC 2808
Query 2778 CCTATAACTAGGAACCCGGTGAAAGGATATCAGAAGTTGCAGGCTATCCTTAAAACAGTG 2837
||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct 2809 CCTATAACTAGGAACCCAGTGAAAGGATATCAGAAGCTGCAGGCTATCCTTAAAACAGTG 2868
Query 2838 ATGCTTCGCCGAACTAAAGGTTCATTTCTTGATGGGAAACCCATAATCTCTTTACCTCCG 2897
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2869 ATGCTTCGCCGAACTAAAGGTTCACTTCTTGATGGGAAACCCATAATCTCTTTACCTCCG 2928
Query 2898 AAGTCCATTGAGCTGAGAAAAGTGGATTTCACTGTGGAGGAACGTGATTTCTACTCCAAA 2957
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2929 AAGTCCATTGAGTTGAGAAAAGTGGATTTCACTGTGGAGGAACGTGATTTCTACTCCAAA 2988
Query 2958 CTAGAGGCTGAATCTCGTACTCAATTCAGGGAATATGCAGAAGCCGGAACAGTGAAGCAA 3017
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2989 CTAGAGGCTGAATCTCGTACTCAATTCAGGGAATATGCAGAAGCTGGAACAGTGAAGCAA 3048
Query 3018 AATTATGTAAATATCTTGTTGATGCTCTTGCGCCTTCGCCAAGCTTGTGATCACCCTCTT 3077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3049 AATTATGTAAATATCTTGTTGATGCTCTTGCGCCTTCGCCAAGCTTGTGATCACCCTCTT 3108
Query 3078 CTGGTGAATGGTGAATACAGTTTTACCTGGGAATCTTCTGTTGGATTAGCAAAGAAACAG 3137
|| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 3109 CTCGTGAATGGTGAATACAGTTTTACCTGGGAATCTTCTGTTGGATTAGCTAAGAAGCAG 3168
Query 3138 ATTCAGTCAGAAGCTTCATTAGCAATTTGTGGTATCTGCAATGATGCACCCGAAGATGCT 3197
||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 3169 ATTCAGTCAGACGCTTCATTGGCAATTTGTGGTATCTGCAATGATGCACCTGAAGATGCT 3228
Query 3198 GTTGTTTCAGTCTGTGGTCATGTTTTCTGTAAACAGTGCATATATGAACGCCTTACTGGT 3257
|||| |||||| || |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 3229 GTTGCTTCAGTTTGCGGTCATGTTTTCTGTAAACAGTGCATTTATGAACGCCTTACTGGT 3288
Query 3258 GATAATAATCACTGTCCCCTTGCAAACTGCAATGTCAGACTCACCATCTCATCATTATCT 3317
|||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct 3289 GATAGTAATCACTGTCCCTTTGCAAACTGCAATGTCAGACTCACCATCTCATCGTTATCT 3348
Query 3318 TCCAAAACGAGATCGGACGATGCTATGCCTGACATGCAGGATCGTGCCGCTTCGAATAGC 3377
||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 3349 TCCAAAACGAGATTGGACGATGCTATGCCTGACATGCAGGAGCGTGCTACTTCGAATAGC 3408
Query 3378 CTTAGCCCCTGTTCTGATGAAGATCTTCCATATGGTTCATCTAAAATCAAGGCTGCTCTA 3437
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3409 CTTAGCCCTTGTTCTGATGAAGATCTTCCATATGGTTCATCTAAAATCAAGGCTGCTCTA 3468
Query 3438 GAGATCTTACAATCACTGCCCAAACCACAGGATTTGACAGATACAAATCAGATCTCTCAA 3497
|||||||||||||||||||||||| |||| |||||||||||| |||||||||||||| ||
Sbjct 3469 GAGATCTTACAATCACTGCCCAAAGCACATGATTTGACAGATTCAAATCAGATCTCTGAA 3528
Query 3498 AACAGTGAATACTCCAGTCTTCCTGTAACTCCAGTTAAGAATGAGGGTATTAGCGTTGTT 3557
||||| ||||||||| ||||| || ||||||| || |||||||||||||| ||||||| |
Sbjct 3529 AACAGAGAATACTCCGGTCTTTCTATAACTCCTGTGAAGAATGAGGGTATGAGCGTTGAT 3588
Query 3558 GTTCCGGTTAAGGTAGCTGGAGAAAAGGCCATTGTTTTTTCCCAATGGACAAAGATGCTA 3617
|||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 3589 GTTCCGATTAAGGTAGCTGGAGAAAAAGCCATTGTTTTTTCCCAATGGACAAAGATGCTA 3648
Query 3618 GACCTACTTGAAGCTTCTCTTGTAAGTTCACATATTCAGTATAGAAGGCTTGATGGAACA 3677
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 3649 AACCTACTTGAAGCTTCTCTTGTAAGTTCACATATTCAGTATAGAAGGCTCGATGGAACA 3708
Query 3678 ATGTCAGTTGCTGCTCGAGATAAAGCAGTGCAGGATTTCAACACTCTCCCTGAGGTTACT 3737
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 3709 ATGTCAGTTGCTGCTAGGGATAAAGCAGTGCAGGATTTCAACACTCTCCCTGAGGTTACT 3768
Query 3738 GTAATGATAATGTCTCTCAAGGCTGCTAGTCTTGGACTGAATATGGTAGCAGCTTGTCAT 3797
|||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||
Sbjct 3769 GTAATGATAATGTCTCTCAAGGCTGCTAGTCTCGGACTGAACATGGTGGCAGCTTGTCAT 3828
Query 3798 GTTCTGATGCTGGATTTATGGTGGAACCCAACAACCGAGGATCAAGCAATTGATAGAGCA 3857
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 3829 GTTCTGATGCTGGACTTATGGTGGAACCCAACAACCGAGGATCAAGCAATCGATAGAGCA 3888
Query 3858 CATCGTATAGGACAGACACGACCAGTAACAGTTGTTCGGTTCACAGTAAAAGATACAGTC 3917
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 3889 CATCGTATAGGACAGACACGACCAGTAACAGTAGTTCGCTTCACAGTAAAAGATACAGTC 3948
Query 3918 GAAGATCGGATATTAGCCCTTCAGCAAAAGAAAAGAATGATGGTAGCCTCTGCATTTGGA 3977
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 3949 GAAGATCGGATATTAGCCCTTCAGCAAAAGAAGAGAATGATGGTAGCCTCTGCATTTGGA 4008
Query 3978 GAAGATGAAAAGGGAAGCCGACAGTCTCACCTCACCGTAGAGGACTTGAGCTACCTGTTT 4037
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 4009 GAAGATGAAAAGGGAAGCCGACAGTCTCACCTCACAGTAGAGGACTTGAGCTATCTGTTT 4068
Query 4038 ATGGCTGATTCATGAGAATGAGCTTCAAGCTCCTTTTTGACCAATGCGGGCGGGTACATA 4097
|||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||
Sbjct 4069 ATGGCTGATTCATGAGAACGAGCTTCGTGCTC-TTTTTGACCAATGCGGGCGGGTACATA 4127
Query 4098 TGATAGGGTTTTTGTGCAGTTTTAGGAGGAAGAAACTCTTCGTTTAACTGACTACAGGTT 4157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4128 TGATAGGGTTTTTGTGCAGTTTTAGGAGGAAGAAACTCTTCGTTTAACTGACTACAGGTT 4187
Query 4158 TGTGCAAAAGAAA----GATTAGAAAAGAC--T-ATTGGGGTTTGGGATATAAAAATAGA 4210
||||||||| ||| ||||||||||||| | |||||| |||||| ||||||||||||
Sbjct 4188 TGTGCAAAAAAAAAAAAGATTAGAAAAGACGATTATTGGG-TTTGGGGTATAAAAATAGA 4246
Query 4211 AAGCTGATCCGATTTGATTATTGGTTCCATTTAGACTTTAGGTATTGACAATTAA-TGGA 4269
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||
Sbjct 4247 AAGCTGATCCGATTTGATTATTGGTTACATTTAGACTTTAGGTATTGACAGTTAAATGGA 4306
Query 4270 AGATGACAATATACAGGAGC--ATTTGCTATTGGATTTCTCATTGTACGATCACAATGTG 4327
||||||||||| | ||||| ||||||| ||| ||||||||||||| |||||||||| |
Sbjct 4307 AGATGACAATACATAGGAGTGTATTTGCTTTTGAATTTCTCATTGTAAGATCACAATGCG 4366
Query 4328 ATTGGTCCGGCGAGTTATTATAGCTT 4353
|||||||| ||||||||| |||||||
Sbjct 4367 ATTGGTCCAGCGAGTTATAATAGCTT 4392
> AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr1:3703672-3709302 REVERSE LENGTH=4072
Length=4072
Score = 804 bits (435), Expect = 0.0
Identities = 813/988 (82%), Gaps = 56/988 (6%)
Strand=Plus/Plus
Query 2123 TGAACACTCTCAATTGCTTTCCAATGAAAACAAAGTTGGTCG-AGATAGTGTGGGTAAAG 2181
||| ||||||||| || ||| |||||||||||||||| |||| ||||||| | | |||
Sbjct 1818 TGATCACTCTCAAGTGGTTTTCAATGAAAACAAAGTT-GTCGAAGATAGTTTATG-CAAG 1875
Query 2182 -TGAGGGGAAGGCCAGCTGCTGGAACGCTTGTTGTCTGTCCCACTAGTGTT-ATGCGGCA 2239
||||||||||||||||||| ||||| ||| ||||||||||||||||| || ||| | ||
Sbjct 1876 ATGAGGGGAAGGCCAGCTGCCGGAACTCTTATTGTCTGTCCCACTAGT-TTGATGAGACA 1934
Query 2240 GTGGGCTGATGAATTACATAAGAAGGTGACTAGTGAAGCGA-ATCTCTCTGTTCTGGTAT 2298
|||||||||||||||| |||||||| ||| |||||| | |||||||||| |||||||
Sbjct 1935 ATGGGCTGATGAATTACGCAAGAAGGTTACTCTTGAAGC-ACATCTCTCTGTGCTGGTAT 1993
Query 2299 ACCATGGGT-CTAGTAGAACAAAGGATCCTTATGAGTTGGCTAAATATGATGTTGTTGTT 2357
|||| || | | || ||||||||||||||| | ||| | |||||||||||||| || ||
Sbjct 1994 ACCACGGTTGC-AGCAGAACAAAGGATCCTCACGAGCTAGCTAAATATGATGTCGTCATT 2052
Query 2358 ACCACATTTTCTATTGTAAGTATGGAAGTTCCAAAGCAGCCTCTTGTTGATGATGAG--G 2415
||||||| ||| |||| || ||||||||||||| ||||||| | |||| | ||| |
Sbjct 2053 ACCACATATTCCCTTGTGAGCGTGGAAGTTCCAAAACAGCCTC--G-TGAT-A-GAGCTG 2107
Query 2416 ACGAAGAGAAGGATGGTGTACAGGATGGTGGAACTGCAGCTACTGGCTTTT-GCTCAAAC 2474
| || ||||||| ||| |||| ||||||||| || | || ||| |||| ||||||||
Sbjct 2108 ATGAGGAGAAGGGTGGCATACATGATGGTGGAGTTGAATCTGTTGG-TTTTGGCTCAAAC 2166
Query 2475 AAGAAAAGGAAATATCCTCCGGATTCTAAAAAGAGGGGCTCAAAGAAGAAGAAAC----- 2529
|| |||| | || | | || ||||| |||||| |||| ||||||||| |||||
Sbjct 2167 AA-AAAA-G--ATCT-C-CCAAATTCTCAAAAGAAGGGCACAAAGAAGAGGAAACATATG 2220
Query 2530 -------AA---GTTGAGTTTCTGTCTGGCCCTCTTGCGAAAGTTTCATGGTTTAGAGTT 2579
|| ||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct 2221 GATTGTGAACCTGTTGAGTTTCTGTCTGGCCCTCTCGCGCAAGTTTCATGGTTTAGAGTT 2280
Query 2580 GTTCTAGATGAGGCACAGAGCATTAAGAATTACAAAACCCAAG-TTGCAAGAGCATGCTG 2638
||||||||||| || |||||||||||||||||||||||||||| || ||| |||||| |
Sbjct 2281 GTTCTAGATGAAGCTCAGAGCATTAAGAATTACAAAACCCAAGCTT-CAATAGCATGTTC 2339
Query 2639 GGGCCTTCGTGCTAAACGGAGGTGGTGTTTGTCTGGCACTCCAATCCAGAATTCAATCGA 2698
||||||| |||||| || ||||||||||||||||||||||| |||||||||||||| |
Sbjct 2340 AGGCCTTCATGCTAAGCGTAGGTGGTGTTTGTCTGGCACTCCTATCCAGAATTCAATTGC 2399
Query 2699 TGACCTCTACAGCTACTTTC-GATTCCTCAAATATGATCCTTATTCTTCCTACGTATTGT 2757
|||||||||||||||||| | |||| || || ||||||||||||||| |||| | ||
Sbjct 2400 TGACCTCTACAGCTACTT-CAGATTTCTTAAGTATGATCCTTATTCTAGCTACCAAACGT 2458
Query 2758 TCTGTAGCA-CGATTAAGAACCCTATAACTAGGAACCCGGTGAAAGGATATCAGAA-GTT 2815
| ||| | | ||||||||||||| || | ||| |||||| | |||||||| | || |||
Sbjct 2459 TTTGT-GAAACGATTAAGAACCCCATCAGTAGCTACCCGGGGGAAGGATATAA-AACGTT 2516
Query 2816 GCAGGCTATCCTTAAAACAGTGATGCTTCGCCGAACTAAAGGTTCATTTCTTGATGGGAA 2875
|||||||||||| |||| ||| |||||| | |||||||||| | || |||| ||||| ||
Sbjct 2517 GCAGGCTATCCTGAAAAAAGTAATGCTTAGACGAACTAAAGATACACTTCTCGATGGAAA 2576
Query 2876 ACCCATAATCTCTTTACCTCCGAAGTCCATTGAGCTGAGAAAAGTGGA-TTTCACTGTGG 2934
|||| | ||||||||||||||||||||||| ||| |||| | |||||| ||| || ||
Sbjct 2577 ACCCGTGATCTCTTTACCTCCGAAGTCCATCGAGTTGAGGAGAGTGGACTTT-ACCAAGG 2635
Query 2935 AGGAACGTGATTTCTACTCCAAACTAGAG-GCTGAATCTCGT-ACTCAATTCAGGGAATA 2992
| ||||||||||||||||| ||||||||| || || |||||| || ||||||| ||||||
Sbjct 2636 AAGAACGTGATTTCTACTCAAAACTAGAGTGC-GACTCTCGTGAC-CAATTCAAGGAATA 2693
Query 2993 TGCAGAAGCCGGAACAGTGAAGCAAAATTATGTAAATATCTTGTTGATGCT-CTTGCGCC 3051
||||||||| ||||| ||||||||||||||||||||||| ||||||||||| || ||| |
Sbjct 2694 TGCAGAAGCTGGAACGGTGAAGCAAAATTATGTAAATATTTTGTTGATGCTGCT-GCGTC 2752
Query 3052 TTCGCCAAGCTTGTGATCACCCTCTTCT 3079
|||| |||||||||| |||||||||||
Sbjct 2753 TTCGTCAAGCTTGTGGCCACCCTCTTCT 2780
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 217022195418
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5