BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475245
Length=2420
Score E
Sequences producing significant alignments: (Bits) Value
AT1G60860.1 | Symbols: AGD2 | ARF-GAP domain 2 | chr1:22400927-... 3864 0.0
AT1G10870.1 | Symbols: AGD4 | ARF-GAP domain 4 | chr1:3616610-3... 2032 0.0
> AT1G60860.1 | Symbols: AGD2 | ARF-GAP domain 2 | chr1:22400927-22407777
REVERSE LENGTH=2786
Length=2786
Score = 3864 bits (2092), Expect = 0.0
Identities = 2329/2441 (95%), Gaps = 25/2441 (1%)
Strand=Plus/Plus
Query 1 TATTTTCAAATCGAAGAAGACAGCAATTCGAGGGTTTACTTGTCTTGTCTTGTTGACTCG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 33 TATTTTCAAATCGAAGAAGACAGCAATTCGAGGGTTTACTTGTCTTGTCTTGTTGACTCG 92
Query 61 ATTCGTAGAC------T-T----CTTC-T--TGTTTTGTCTTAACAATGGCTGGTTTTAT 106
|||||||||| | | |||| | |||||| ||||||||||||| ||||||||
Sbjct 93 ATTCGTAGACTTTTGGTCTGAAGCTTCTTCGTGTTTTATCTTAACAATGGCGGGTTTTAT 152
Query 107 CAATCTTGAGGATTCCCCAATGTTTCAAAAACAGGTTTTCTCCTTGGAAGGGACAACTGA 166
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct 153 CAATCTTGAGGATTCCCCAATGTTTCAAAAACAGGTCTTCTCCTTGGAAGGGACAAGTGA 212
Query 167 TGAGCTTAAAGATCGTTGTCAGAAGTTGTACAAAGGTGTTAAGAAGTTCATGGGGGCTTT 226
||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 213 TGAGCTTAAAGATCGTTGTCAGAAGTTATACAAAGGTGTTAAGAAGTTCATGGGAGCTTT 272
Query 227 GGGAGAGGCATCTACTGGAGTCAGTGCCTTTGCAGATTCTCTAGAAGAGTTTGGTGCTGG 286
|||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 273 AGGAGAGGCATCTACTGGAGTTAGTGCCTTTGCAGATTCTCTTGAAGAGTTTGGTGCTGG 332
Query 287 ACATGATGATCCCGTCAGTGTTTCAATTGGAGGTCCAGTAATATCTAAATTTATAAATAC 346
|||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 333 ACATGATGATCCAGTCAGTGTTTCAATTGGAGGTCCAGTAATATCTAAGTTCATAAATAC 392
Query 347 ACTTCGAGAGCTCTCCTCTTATAAGGAGTTTCTTCGCTCACAGGTGGAGCACGTATTACT 406
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 393 ACTTCGAGAGCTCTCCTCTTATAAGGAGTTTCTTCGCTCACAGGTGGAGCATGTATTACT 452
Query 407 TGAGAGGCTGACAAACTTTATGACTGTTGATCTACAAGAAGCAAAGGAGTCTCGCCGTCG 466
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 453 TGAGAGGCTGACAAACTTTATGACTGTTGATCTACAAGAAGCAAAGGAGTCTCGGCGTCG 512
Query 467 TTTTGATAAAGCTGTCCATTCTTATGATCAGGCACGTGAAAAGTTTGTGTCGCTAAAGAA 526
|| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 513 GTTCGATAAAGCTGTCCATTCTTATGATCAGGCACGCGAAAAGTTTGTGTCGCTAAAGAA 572
Query 527 GAATACCAGAGGAGACATTGTTGCTGAGTTGGAAGAGGATCTGGAGAACTCGAAGTCAGC 586
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 573 GAATACCAGAGGAGACATTGTTGCTGAGTTGGAAGAGGATTTGGAGAACTCGAAGTCAGC 632
Query 587 ATTTGAGAAAAGCCGTTTCAATCTAGTAAATTCATTGATGACCATTGAAGCAAAAAAGAA 646
|||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 633 ATTTGAGAAAAGTCGTTTCAATCTAGTAAATTCACTGATGACCATTGAAGCAAAAAAGAA 692
Query 647 GTACGAGTTCTTGGAATCTATAAGTGCAATTATGGATTCCCATTTGAGATATTTTAAGCT 706
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct 693 GTACGAGTTCTTGGAATCTATAAGTGCAATTATGGATTCCCATTTCAAATATTTTAAGCT 752
Query 707 TGGTTATGATCTATTGAGTCAATTGGAGCCTTACATCCATCAGGTATTGACATACGCACA 766
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 753 TGGTTATGATCTATTAAGTCAATTGGAGCCTTACATCCATCAGGTATTGACATACGCACA 812
Query 767 ACAATCAAAAGAACAGTCTAAGATTGAACAAGATCGATTTGCA-AGACGCATTCAAGAAT 825
||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct 813 ACAGTCAAAAGAACAGTCTAAGATTGAACAAGATCGATTTGCACA-ACGCATTCAAGAAT 871
Query 826 TCAGGACTCAATCTGAATTAGACAGCCAACAGGCCTCTGCTAAAGCAGATCCCTCTGGTG 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 872 TCAGGACTCAATCTGAATTAGACAGCCAACAGGCCTCTGCTAAAGCAGATCCCTCCGATG 931
Query 886 TTGATGGAAACCATGTTTATAGAGCTATCCCCCGTAAAAGTGTAGAAGCAAATTCAATTT 945
||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||
Sbjct 932 TTGGTGGAAACCATGTTTATAGAGCTATCCCCCGTAAAAACGTAGAAGCAAACTCAGTTT 991
Query 946 CAACAGCAGACAAGGAAGTAACTAAACAAGGGTATCTATTAAAGCGATCAGCTAGTTTGA 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 992 CAACAGCAGACAAGGAAGTAACTAAACAAGGGTATCTATTAAAGCGATCAGCTAGTTTGA 1051
Query 1006 GAGCTGATTGGAAAAGGAGGTTCTTTGTGCTTGACAACCATGGATCCCTATACTATTACA 1065
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1052 GAGCTGATTGGAAAAGGAGATTCTTTGTGCTTGACAACCATGGATCCCTATACTATTACA 1111
Query 1066 GAAACACCGGTAATAAATCAGCGGGATCTCAGCATTACTACAGTGGTTTAGGTGAGCATA 1125
||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct 1112 GAAACACCGGTAATAAATCAGCGAAATCTCAGCATTACTACAGTGGTTTAGGAGAGCATA 1171
Query 1126 ATAGCGGCGTCTTTGGGAGATTTCGTTCAAGACACAATCGATCAGCTTCACAGGGAAGCC 1185
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1172 GTAGCGGCGTCTTTGGGAGATTTCGTACAAGACACAATCGATCAGCTTCACAGGGAAGCC 1231
Query 1186 TAGATTGCAATATGATCGATCTCCGTACCTCACTGATAAAATTGGAGGCAGAGGACACAG 1245
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 1232 TAGATTGCAATATGATCGATCTCCGTACTTCACTGATAAAATTGGACGCAGAGGACACAG 1291
Query 1246 ATCTTCGACTCTGTTTTAGAATTATATCTCCTCAAAAGACTTACACATTACAGGCTGAAA 1305
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1292 ATCTTCGACTCTGTTTTAGAATTATATCTCCTCAAAAGACTTACACACTACAGGCTGAAA 1351
Query 1306 ATGGAGCTGATAGGATGGATTGGGTCAATAAGATCACAGCAGCTATAACAACACGCCTGA 1365
||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||
Sbjct 1352 ATGGAGCTGATAGGATGGATTGGGTAAATAAGATCACAGCAGCTATAACAATACGTCTGA 1411
Query 1366 ATTCTCATTTTCTGCAGCAGTCACCAGCAAGATACTTGGATAAAAACTATACTAGTTCTG 1425
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1412 ATTCTCATTTTCTGCAGCAGTCACCAGCAAGATACTTGGATAAAAAGAATACTAGTTCTG 1471
Query 1426 GTCCTGCTACTGACGACCTCACCCTGAATCAAAAACAAGATTATAATCAAAGACTAAATA 1485
||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1472 GTCCTGCCACTGAAAACCTCACCCTGAATCAAAAAGAAGATTATAATCAAAGACTAAATG 1531
Query 1486 TGGGGGATGACGTCCTTACAATACTCAGAGGAATTCCTGGAAATAACGA-ATGTGCAGAA 1544
|||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||
Sbjct 1532 TGGGGGATGACGTCCTTACAATACTCAGAGAAATTCCTGGAAATAAC-ACTTGTGCAGAA 1590
Query 1545 TGCAATGAACCTGACCCCGATTGGGCATCATTGAATCTTGGAGTTTTGATGTGCATTGAA 1604
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1591 TGCAATGCACCTGACCCCGATTGGGCATCATTGAATCTTGGAGTTTTGATGTGCATTGAA 1650
Query 1605 TGTTCTGGTGTTCACAGGAATCTCGGCGTCCATATATCCAAGGTGAGATCGCTCACATTG 1664
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1651 TGCTCTGGTGTTCACAGGAATCTCGGCGTTCATATATCCAAGGTGAGATCGCTCACATTG 1710
Query 1665 GATGTGAAAGTATGGGAGCCTACAATCTTGGACTTATTTCGGAACTTAGGCAATGCATAC 1724
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 1711 GATGTGAAAGTATGGGAGCCTACAATCTTGGACTTATTTCGGAACTTAGGCAACGGATAC 1770
Query 1725 TGTAATTCGGTGTGGGAGGAGCTACTTCA-C-C-TTGAGGATGACGGTGAAAAGGG-TCC 1780
|||||||| || ||||||||||||||||| | | |||| |||||| |||||||||| ||
Sbjct 1771 TGTAATTCAGTCTGGGAGGAGCTACTTCATCACCTTGACGATGACAGTGAAAAGGGATCG 1830
Query 1781 AACAGACACACTTGCATC-GATTCCGAAACCATCTTCAGAAGATTCCTTTACTCTGAAGG 1839
| |||||||||||||||| | ||| |||||||||||||||||||| |||||||||||||
Sbjct 1831 A-CAGACACACTTGCATCAGTTTC-GAAACCATCTTCAGAAGATTGGTTTACTCTGAAGG 1888
Query 1840 AGAAATACATTCATGGAAAGTACCTGGAGAAAGCGCTAGTTGTCAAAGATGAAAGAGAAG 1899
||||||| ||| | |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1889 AGAAATATATTAACGGAAAGTACCTGGAGAAAGCACTAGTTGTCAAAGATGAAAGAGAAG 1948
Query 1900 CAAACTCTACTGCCTCAAGTAGAATATGGGAAGCGGTTCAAAGCAGGAACATAAGAGACA 1959
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1949 CAAATTCTACTGCCTCAAGTAGAATATGGGAAGCGGTTCAAAGCAGGAACATAAGAGACA 2008
Query 1960 TCTACCGACTCATTGTAACAGCAGATGCAAATATCATCAATACTAAGTTCGATGATATTA 2019
|||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct 2009 TCTACCGACTCATTGTAAAAGCAGATGCAAATATCATCAATACCAAGTTCGATGATATTA 2068
Query 2020 CTGACGTTGATGCATATCACCACCACCATAATGATGCACCAGATGAAGTAAAGAAAAGGC 2079
||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2069 CTGACCTTGATGTATATCACCACCACCATGTTGATGCACCAGATGAAGTAAAGAAAAGGC 2128
Query 2080 ACGATCCAAATGCGTGCCAGAGAATCAAGGATTCGAACGAACCAAGAAACTGTCTTCAAG 2139
|||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 2129 ACGATCCAAATGCGTGTCAGAGAATCAAGAATTCGAACGAAGCAAGAAACTGTCTTCAAG 2188
Query 2140 GCTGCTCATTGTTGCATGTGGCGTGTCAAAGCGGTGACCCAATCTTGCTTGAACTGTTGT 2199
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2189 GCTGCTCATTGTTGCATGTGGCGTGTCAAAGCGGTGACCCAATCTTGCTTGAACTGCTGT 2248
Query 2200 TGCAGTTTGGGGCTGACATAAACATGAGAGATTACCACGGAAGAACTCCGTTACACCATT 2259
||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct 2249 TGCAGTTCGGGGCTGACATAAACATGAGAGATTACCACGGACGAACTCCATTACACCATT 2308
Query 2260 GCATCGCATCAGGGAACAACACATTTGCAAAGGTTTTACTGAGAAGAGGTGCTCGTCCAT 2319
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct 2309 GCATCGCATCAGGGAACAACGCATTTGCAAAGGTTTTGCTGAGAAGAGGTGCTCGTCCAT 2368
Query 2320 CAATAGAAGATGGTGGAGGATTAAGTGTGTTGGAAAGAGCAATGGAGATGGGAGCCATAA 2379
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2369 CAATAGAGGATGGTGGAGGATTAAGTGTGTTGGAAAGGGCAATGGAGATGGGAGCCATAA 2428
Query 2380 CCGATGAAGAGCTCTTCCTTCTATTAGCAGAGTGTCAGTAA 2420
|||||||||||||||||||||||||||||||||||||||||
Sbjct 2429 CCGATGAAGAGCTCTTCCTTCTATTAGCAGAGTGTCAGTAA 2469
> AT1G10870.1 | Symbols: AGD4 | ARF-GAP domain 4 | chr1:3616610-3623758
REVERSE LENGTH=2769
Length=2769
Score = 2032 bits (1100), Expect = 0.0
Identities = 1972/2386 (83%), Gaps = 87/2386 (4%)
Strand=Plus/Plus
Query 71 TTCTTCTTGTTTTGTCTTAA-CAATGGCTG-GTTTTATCAATCTTGAGGATTCCCCAATG 128
|||||| | |||||| |||| ||||||| | ||||||||||| |||||||||||||||
Sbjct 126 TTCTTCCT-TTTTGT-TTAACCAATGGC-GACCTTTATCAATCTGGAGGATTCCCCAATG 182
Query 129 TTTCAAAAACAGGTTT-TCTCCTTGGAAGGGACAACTGATGAGCTTAAAGATCGTTGTCA 187
||||| |||||||||| | |||||||| |||||| |||| ||||||||||||||||||||
Sbjct 183 TTTCAGAAACAGGTTTGT-TCCTTGGAGGGGACAGCTGACGAGCTTAAAGATCGTTGTCA 241
Query 188 GAAGTTGTACAAAGGTGTTAAGAAGTTCATGGGGGCTTTGGGAGAGGCATCTACTGGAGT 247
|||| | |||||||||||||||||||| |||||| |||||||||||||||||| ||||
Sbjct 242 GAAGCTATACAAAGGTGTTAAGAAGTTTATGGGGACTTTGGGAGAGGCATCTAAAGGAGA 301
Query 248 CAGTGCCTTTGCAGATTCTCTAGAAGAGTTTGGTGCTGGACATGATGATCCCGTCAGTGT 307
||||| ||||||| || ||| ||||| ||||| | ||||| ||||||||| ||||| |
Sbjct 302 AAGTGCTTTTGCAGCTTGTCTGGAAGAATTTGGGGGTGGACCTGATGATCCTATCAGTCT 361
Query 308 TTCAATTGGAGGTCCAGTAATATCTAAATTTATAAATACACTTCGAGAGCTCT-CCTCTT 366
|||||||||||| || || ||||| ||||| |||||| ||||||||||||| | ||||||
Sbjct 362 TTCAATTGGAGGGCCCGTTATATCCAAATTCATAAATGCACTTCGAGAGCT-TGCCTCTT 420
Query 367 ATAAGGAGTTTCTTCGCTCACAGGTGGAGCACGTATTACTTGAGAGGCTGACAAACTTTA 426
|||||||||||||| |||||||||||||||| || ||||||||||| ||| |||||||
Sbjct 421 ATAAGGAGTTTCTTTGCTCACAGGTGGAGCATGTGCTACTTGAGAGGTTGATGAACTTTA 480
Query 427 TGACTGTTGATCTACAAGAAGCAAAGGAGTCTCGCCGTCGTTTTGATAAAGCTGTC-CAT 485
| | |||||||||||||||||| ||||||||||||| ||| ||||||||||||| | |||
Sbjct 481 TTAGTGTTGATCTACAAGAAGCTAAGGAGTCTCGCCATCGATTTGATAAAGCTG-CTCAT 539
Query 486 TCTTATGATCAGGCACGTGAAAAGTTTGTGTCGCTAAAGAAGAATACCAGAGGAGACATT 545
|| ||||||||| | || |||||||||||||| ||||||||||||| |||||||| |||
Sbjct 540 TCGTATGATCAGTCGCGCGAAAAGTTTGTGTCTTTAAAGAAGAATACAAGAGGAGAAATT 599
Query 546 GTTGCTGAGTTGGAAGAGGATCTGGAGAACTCGAAGTCAGCATTTGAGAAAAGCCGTTTC 605
|| || ||||||||||||||||||||||| || |||||| |||||||||| |||||||||
Sbjct 600 GTGGCAGAGTTGGAAGAGGATCTGGAGAATTCAAAGTCAACATTTGAGAAGAGCCGTTTC 659
Query 606 AATCTAGTAAATTCATTGATGACCATTGAAGCAAAAAAGAAGTACGAGTTCTTGGAATCT 665
|||||||| |||||| ||||||| |||||||| ||||||||||| ||||| || ||||||
Sbjct 660 AATCTAGTGAATTCACTGATGACTATTGAAGCGAAAAAGAAGTATGAGTTTTTAGAATCT 719
Query 666 ATAAGTGCAATTATGGATTCCCATTTGAGATATTTTAAGCTTGGTTATGATC-TATTGAG 724
|| || |||||||||||| ||||| |||||||||| || ||||| ||||| | | ||||
Sbjct 720 ATTAGCGCAATTATGGATGCCCATCTGAGATATTTCAAACTTGGATATGA-CTTGTTGAA 778
Query 725 TCAATTGGAGCC-TTACATCCATCAGGTATTGACATACGCACAACAATCAAAAGAACAGT 783
|||| |||| || || ||||||||| |||| ||||| || || ||||||||||||||||
Sbjct 779 TCAACTGGAACCATT-TATCCATCAGATATTAACATATGCTCAGCAATCAAAAGAACAGT 837
Query 784 CTAAGATTGAACAAGATCGATTTGCAAGACGCATTCAAGAATTCAGGACTCAATCTGAAT 843
|||||||||||||||||||| | |||||||||||||||||||||||||| || |||||||
Sbjct 838 CTAAGATTGAACAAGATCGACTAGCAAGACGCATTCAAGAATTCAGGACCCAGTCTGAAT 897
Query 844 TAGACAGCCAACAG--GCCTCTGCTAAAGCAGA-TCCCTCTGGTGTTGATGGAAACCATG 900
|||||||||||||| | || ||||| ||||| || ||||||| | | || |||| ||
Sbjct 898 TAGACAGCCAACAGCTGG-TC-GCTAATGCAGAGTCG-TCTGGTGCTAACGGGAACCGTG 954
Query 901 TTTATAG-AGCTATCCCCCGTAAAAGTGTAGAAGCAAATTCAA-TTTCAACAGCAGACAA 958
|| | | | |||||| |||| | | | ||| ||| ||| ||||||||||||
Sbjct 955 TTGGTGGGAA-TATCCCTTACAAAAAT--ACC-G-AAA--CAAGTTT-AACAGCAGACAA 1006
Query 959 GGAAGTAACTAAACAAGGGTATCTATTAAAGCGATCAG-CTAGTTTGAGAGCTGATTGGA 1017
|||||||| |||||| ||||||||||||||||| || | | ||||||||| |||||||||
Sbjct 1007 GGAAGTAATTAAACAGGGGTATCTATTAAAGCGTTC-GTCAAGTTTGAGAACTGATTGGA 1065
Query 1018 AAAGGAGGTTCTTTGTGCTTGACAACCATGGATCCCTATACTATTACAGAAAC-ACCGGT 1076
|||| | ||| ||||| ||||| | ||||| ||| | ||||||||||||| | | |||
Sbjct 1066 AAAGAAAGTTTTTTGTCCTTGATAGTCATGGCTCCATGTACTATTACAGAA-CTAATGGT 1124
Query 1077 AATAAATCAGCGGGATCTCAGCATTACTACAGTGGTTTAGGTGAGCATAATAGC-GGCGT 1135
||||||||| ||||||||| ||| |||| ||||| | | ||| ||||||| | || ||
Sbjct 1125 AATAAATCAATGGGATCTCATCATCACTATAGTGGATCATCTGACCATAATA-CTGGAGT 1183
Query 1136 CTTTGGGAGATTTCGTTCAAGACACAATCGATCAGCTTC----AC--AGGGAAGCCTAGA 1189
||||| ||||||| ||||||| |||||||||| ||| || |||| ||| |||
Sbjct 1184 TTTTGGTCGATTTCGGGCAAGACATAATCGATCAGGTTCGCTCACTGAGGGCAGCTTAGG 1243
Query 1190 TTGCAATA-TGATCGATCTCCGTACCTCACTGATAAAATTGGAGGCAGAGGACACAGATC 1248
| |||| | || ||||| || || || |||||||| | || ||||| |||| ||||
Sbjct 1244 CTATAATACT-ATTGATCTTCGCACTTCTTTGATAAAACTAGACGCAGAAGACATGGATC 1302
Query 1249 TTCGACTCTGTTTTAGAATTATATCTCCTCAAAAGACTTACACA-TTACAGGCTGAAAAT 1307
|||| |||||||| |||||||| ||||||||||| ||||||||| || ||||||||||||
Sbjct 1303 TTCGTCTCTGTTTCAGAATTATTTCTCCTCAAAAAACTTACACACTT-CAGGCTGAAAAT 1361
Query 1308 GGAGCTGATAGGATGGATTGGGTCAATAAGATCACAGCAGCTATAACAACACGCCTGAAT 1367
||||| ||||||||||| ||||| |||||||||||| ||||||| || | || |||
Sbjct 1362 GGAGCAGATAGGATGGACTGGGTAAATAAGATCACAAAAGCTATAGGGACGCTTCTCAAT 1421
Query 1368 TCTCATTTTCTGCAGCAGTCACCAGCAAGATACTTGGATAAAAACTA-TACTAGTTCTGG 1426
|||||||||||||| |||||||| | |||||||||||||| || | | | |||||||
Sbjct 1422 TCTCATTTTCTGCAACAGTCACCTGTGCGATACTTGGATAAAGACAACTCC-AGTTCTGC 1480
Query 1427 TCCTGCTACTGAC-GACCTCACCCTGAATCAAAAACAAGATTATAAT-CAAAGACTAAAT 1484
|||||||| || | | | || || | |||||| | | || || || ||| ||| ||||
Sbjct 1481 TCCTGCTAATG-CTGTCGTCTCCGGGGATCAAATTCGACATAATGATTCAA-GACAAAAT 1538
Query 1485 ATGGGGGATGACGTCCTTA-CAATACTCAGAGGAATTCCTGGAAATAACGAATGTGCAGA 1543
|| |||||||| ||| | | |||||||||||||| |||| |||||||| | |||||||||
Sbjct 1539 ATCGGGGATGATGTC-TCAACAATACTCAGAGGACTTCCGGGAAATAATGCATGTGCAGA 1597
Query 1544 ATGCAATGAACCTGACCCCGATTGGGCATCATTGAATCTTGGAGTTTTGATGTGCATTGA 1603
||||||| ||||| |||||||||||||| || ||||||||||||||| |||||||| |
Sbjct 1598 GTGCAATGCTCCTGAGCCCGATTGGGCATCGTTAAATCTTGGAGTTTTGTTGTGCATTCA 1657
Query 1604 ATGTTCTGGTGTTCACAGGAATCTCGGCGTCCATATATCCAAGGTGAGATCGCTCACATT 1663
||| ||||||||||||||||||||||| || ||||||||||||||||| || ||| ||||
Sbjct 1658 ATGCTCTGGTGTTCACAGGAATCTCGGGGTTCATATATCCAAGGTGAGGTCCCTCTCATT 1717
Query 1664 GGATGTGAAAGTATGGGAGCCTACAATCTTGGACTTATTTCGGAACTTAGGCAATGCATA 1723
||||||||||| |||||||| || ||||||||||||||| | || || || |||| |||
Sbjct 1718 AGATGTGAAAGTGTGGGAGCCAACGATCTTGGACTTATTTAGAAATTTGGGTAATGTATA 1777
Query 1724 CTGTAATTCGGTGTGGGAGG-AGCTACTTCACCTTGAGGATGACGGTGAAAAGGG-TCCA 1781
||||||||| ||||||||| | |||||||||||||| |||||| | ||| | || || |
Sbjct 1778 CTGTAATTCACTGTGGGAGGGA-CTACTTCACCTTGACGATGACTGCGAAGACGGATC-A 1835
Query 1782 ACA--GACACACTTGCATC-GATTCCGAAACCATCTTCAGAAGATTCCTTTACTCTGAAG 1838
|| | | || | || || | ||| ||||||| | ||||||||||||||| | |||||
Sbjct 1836 GCATTGTCGCA-T-GCTTCAGTTTCA-AAACCATGTCCAGAAGATTCCTTTAGTGTGAAG 1892
Query 1839 GAGAAATACATTC-ATGGAAAGTACCTGGAGAAAGCGCTAGTTGTCAAAGATGAAAGAGA 1897
||||||||||||| | |||||||||||||||||||| |||| |||| |||||||| ||
Sbjct 1893 GAGAAATACATTCTA-GGAAAGTACCTGGAGAAAGCATTAGTCATCAAGGATGAAAGTGA 1951
Query 1898 AGCAAAC-TCTACTGCCT-CAAGTAGAATATGGGAAGCGGTTCAAAGCAGGAACATAAGA 1955
||||||| | | |||| | | ||||||||||||||||| ||||||||||| |||||| ||
Sbjct 1952 AGCAAACCTTT-CTGC-TGCGAGTAGAATATGGGAAGCTGTTCAAAGCAGAAACATACGA 2009
Query 1956 GACATCTACCGACTCATTGTAAC-A--GCAGATGCAAATATCATCAATACTAAGTTCGAT 2012
|| ||||| ||||| || || || | | |||| ||||||||||||||| ||||| |||
Sbjct 2010 GAAATCTATCGACTTATAGTTACTACTGGGGATGTAAATATCATCAATACCAAGTTTGAT 2069
Query 2013 GATATTACTGACGTTGATGCATATCACCACCACCATAATGATGCACCAGATGAA-G---T 2068
||||| ||||| | |||||||||||||| | | ||||||| |||| ||| | |
Sbjct 2070 GATATAACTGATATCGATGCATATCACCAT-A---T--TGATGCAGCAGA-GAAAGCAGT 2122
Query 2069 AAAGAAAAGGCACGATCCAAATGCGTGCCAGAGAATCAAGGATTCGAACGAACCAAGAAA 2128
||||||||| || ||||||| || || |||||||| || || || |||||||||||||
Sbjct 2123 AAAGAAAAGACATGATCCAACTGTATGTCAGAGAATTAAAGAATCCAACGAACCAAGAAG 2182
Query 2129 CTGTCTTCAAGGCTGCTCATTGTTGCATGTGGCGTGTCAAAGCGGTGACCCAATCTTGCT 2188
|||||||||||| ||||| ||| | |||||||| ||||| | |||||| | |||||||
Sbjct 2183 CTGTCTTCAAGGATGCTCCTTGCTCCATGTGGCTTGTCACATTGGTGACTCTGTCTTGCT 2242
Query 2189 TGAACTGTTGTTGCAGTTTGGGGCTGACATAAACATGAGAGATTACCACGGAAGAACTCC 2248
|||| |||||||||||||||| |||||| ||||||| |||||||| |||||||| |||||
Sbjct 2243 TGAATTGTTGTTGCAGTTTGGTGCTGACCTAAACATAAGAGATTATCACGGAAGGACTCC 2302
Query 2249 GTTACACCATTGCATCGCATCAGGGAACAACACATTTGCAAAGGTTTTACTGAGAAGAGG 2308
||| ||||||||||| ||||||||||| ||| |||||||||| || ||||| |||||||
Sbjct 2303 GTTGCACCATTGCATATCATCAGGGAACCACAAATTTGCAAAGATTCTACTGCGAAGAGG 2362
Query 2309 TGCTCGTCCATCAATAGAAGATGGTGGAGGATTAAGTGTGT-TGGAAAGAGCAATGGAGA 2367
|| ||||| || ||||| || | |||||| |||| || | | |||||||| ||||| |
Sbjct 2363 AGCACGTCCGTCGATAGAGGACGATGGAGGGCTAAGCGT-TCTAGAAAGAGCGATGGAAA 2421
Query 2368 TGGGAGCCATAACCGATGAAGAGCTCTTCCTTCTATTAGCAGAGTG 2413
||||||| ||||| |||||||||||||| ||||| ||||| |||||
Sbjct 2422 TGGGAGCGATAACTGATGAAGAGCTCTTTCTTCTCTTAGCCGAGTG 2467
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 120180104730
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5