BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475250
Length=1453
Score E
Sequences producing significant alignments: (Bits) Value
AT1G60810.1 | Symbols: ACLA-2 | ATP-citrate lyase A-2 | chr1:22... 2194 0.0
AT1G10670.3 | Symbols: ACLA-1 | ATP-citrate lyase A-1 | chr1:35... 1517 0.0
> AT1G60810.1 | Symbols: ACLA-2 | ATP-citrate lyase A-2 | chr1:22388527-22391165
REVERSE LENGTH=1488
Length=1488
Score = 2194 bits (1188), Expect = 0.0
Identities = 1389/1480 (94%), Gaps = 37/1480 (3%)
Strand=Plus/Plus
Query 1 GCTGACTACCGAAGCTGTAGCTACCTCTTTCATCCTCTCTCAACGTATGGCTCGCAAGAA 60
||| |||| |||||||||||||| | | |||||||||||||||||||||| |||||
Sbjct 14 GCTAACTAACGAAGCTGTAGCTA---C---C-TCCTCTCTCAACGTATGGCTCGGAAGAA 66
Query 61 GATCAGAGAGTATGACTCAAAGAGACTGGTGAAAGAACACTTCAAAAGGCTTTCTGGTCA 120
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 67 GATCAGAGAGTATGACTCAAAGAGACTGGTGAAAGAACACTTCAAAAGACTCTCTGGTCA 126
Query 121 AGAATTGCCTATCAGATCCGTTCAGATTAACCAAGAGACTGATCTGAATGAGCTAGTAGA 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 127 AGAATTGCCTATCAGATCCGTTCAGATTAACCAAGAGACTGATCTAAATGAGCTAGTAGA 186
Query 181 GAGGGAGCCTTGGCTCTCATCTGAGAAGCTTGTGGTGAAACCTGATATGTTGTTCGGAAA 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 187 GAGAGAGCCTTGGCTCTCATCTGAGAAGCTTGTGGTGAAACCTGATATGTTGTTCGGAAA 246
Query 241 GCGTGGCAAAAGCGGTTTGGTTGCCTTGAAATTAGATTTTGCTGATGTTGCTACTTTCGT 300
|||||||||||||||||||||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct 247 GCGTGGCAAAAGCGGTTTGGTTGCATTGAACTTAGATTTCGCTGATGTTGCAACTTTCGT 306
Query 301 GAAAGAACGGTTAGGCAAAGAGGTAGAGATGAGTGGATGCAAAGGACCCATAACAACGTT 360
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 307 GAAAGAACGCTTAGGCAAAGAGGTAGAGATGAGTGGATGCAAAGGACCCATAACAACATT 366
Query 361 TATTGTTGAACCATTTGTCCCACACAATGAGGAGTTTTATCTTAATATTGTCTCTGATAG 420
||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 367 CATTGTTGAACCATTTGTCCCACACAATGAAGAGTTCTATCTTAATATTGTCTCTGATAG 426
Query 421 ACTTGGCTGCAGCATTAGCTTTTCGGAGTGTGGAGGTATCGACATCGAGGAGAACTGGGA 480
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 427 ACTTGGCTGCAGCATTAGCTTTTCGGAGTGTGGAGGAATTGACATCGAGGAGAACTGGGA 486
Query 481 CAAGGTCAAGACCATATCTATACCGACGGGTGCTTCCCTGACACCTGAGCTATGTGCACC 540
|||||||||||||||| ||||||| || ||||||||||||||| |||| ||||||||||
Sbjct 487 CAAGGTCAAGACCATAACTATACCAACAGGTGCTTCCCTGACATTTGAGATATGTGCACC 546
Query 541 TCTTGTTGCAACACTTCCTCTAGAGATCAAAGGGGAACTTGAAGATTTTATTCAAGTTAT 600
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 547 TCTTGTTGCAACCCTTCCTCTAGAGATCAAAGGGGAACTTGAAGATTTTATTCAAGTCAT 606
Query 601 TTTTACCTTATTCGAAGATCTTGATTTCACTTTCTTGGAGATGAATCCTTTCACATTGGT 660
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 607 TTTTACCCTATTCGAAGATCTTGATTTCACTTTCTTGGAGATGAATCCTTTCACATTGGT 666
Query 661 TGATGGAAAGCCTTATCCTCTAGATATGAGGGGTGAGCTTGATGACACCGCTGCTTTCAA 720
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGATGGAAAGCCTTATCCTCTGGATATGAGGGGTGAGCTTGATGACACCGCTGCTTTCAA 726
Query 721 AAACTTTAAGAAGTGGGGTGACATTGAA-TTCCCTATGCCATTTGGAAGAGTAATGAGTT 779
|||||||||||||||||| ||||||||| ||||| ||||||||||||||||| |||||||
Sbjct 727 AAACTTTAAGAAGTGGGGCGACATTGAATTTCCC-ATGCCATTTGGAAGAGTGATGAGTT 785
Query 780 CAACAGAAAGCTTCATCCACGGTCTAGATGAGAAGACAAGTGCGTCTTTGAAGTTCACTG 839
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 786 CAACAGAGAGCTTCATCCACGGTCTAGATGAGAAGACAAGTGCCTCTTTGAAGTTCACTG 845
Query 840 TTCTGAATCCCAAGGGAAGGATTTGGACTATGGTAGCTGGAGGAGGTGCAAGTGTCATCT 899
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 846 TTCTGAATCCCAAGGGAAGAATTTGGACTATGGTAGCTGGAGGAGGTGCAAGTGTCATCT 905
Query 900 ATGCCGATACCGTTGGAGATCTCGGGTATGCATCTGAGCTTGGAAATTATGCTGAATACA 959
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 906 ATGCTGATACCGTTGGAGATCTCGGGTATGCATCTGAGCTTGGCAATTATGCTGAATACA 965
Query 960 GTGGAGCACCCAAAGAAGACGAGGTTTTGCAGTACGCGAGAGTCGTCATCGATTGTGCTA 1019
|||||||||||||||||||||||||||||||||| || ||||| ||||| ||||||||||
Sbjct 966 GTGGAGCACCCAAAGAAGACGAGGTTTTGCAGTATGCCAGAGTTGTCATTGATTGTGCTA 1025
Query 1020 CAGCGAATCCGGATGGAAAAAGTAGAGCTCTGGTAATCGGAGGAGGAATTGCTAACTTCA 1079
|||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||||
Sbjct 1026 CAGCGAATCCGGATGGAAAAAGCAGGGCTCTGGTAATTGGAGGTGGAATTGCTAACTTCA 1085
Query 1080 CCGATGTTGCTGCTACCTTCAATGGCATAATCCGAGCTCTCAAGGAAAAGGAAGCAAAGC 1139
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1086 CCGATGTTGCTGCTACCTTCAATGGCATAATCCGAGCTCTCAAGGAAAAAGAAGCAAAGC 1145
Query 1140 TGAAAGCAGCAAGGATGCATATATTTGTGAGGAGAGGAGGACCAAACTACCAAAAGGGAC 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1146 TGAAAGCAGCAAGGATGCATATATTTGTGAGGAGAGGAGGACCAAACTACCAAAAGGGAC 1205
Query 1200 TTGCTAAAATGAGATCACTTGGAGATGAAATCGGTGTCCCCATCGAGGTGTATGGTCCTG 1259
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1206 TTGCTAAAATGAGATCACTTGGAGACGAAATCGGTGTCCCCATCGAGGTGTATGGTCCTG 1265
Query 1260 AAGCAACAATGACAGGTATCTGCAAGGAGGCAATCCAGTACATCACCGCGGCTGCATAAG 1319
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 1266 AAGCAACAATGACAGGTATATGCAAGGAGGCAATCCAGTACATCACAGCGGCTGCATAAG 1325
Query 1320 CCTTTACAATCTTATCAGTTACTTTCAAAATATTCTT--G--T-----G--TTTGA--C- 1365
||||||||||||||||| |||||||||||||| |||| | | | ||||| |
Sbjct 1326 CCTTTACAATCTTATCACTTACTTTCAAAATACTCTTTAGCGTCTCTTGAGTTTGAGACG 1385
Query 1366 T-T----AT---GTTTCACCTCTAAATGTTTCTTACTATTCATAAATAATA-AACAAGTA 1416
| | || ||||||| ||||| ||| ||||||||||||||||||| | ||||||||
Sbjct 1386 TGTTTGGATTATGTTTCACTTCTAA-TGTATCTTACTATTCATAAATAA-AGAACAAGTA 1443
Query 1417 TCTTCTTTTTT---ACAAAGTATTTTCTCTTTTGATTCTC 1453
||||||||||| || |||||||||||||||||||||
Sbjct 1444 TCTTCTTTTTTCTTACTTGGTATTTTCTCTTTTGATTCTC 1483
> AT1G10670.3 | Symbols: ACLA-1 | ATP-citrate lyase A-1 | chr1:3535383-3538281
FORWARD LENGTH=1724
Length=1724
Score = 1517 bits (821), Expect = 0.0
Identities = 1053/1167 (90%), Gaps = 8/1167 (1%)
Strand=Plus/Plus
Query 158 ACTGATCTGAATGAGCTAGTAGAGAGGGAGCCTTGGCTCTCATCTGAGAAGCTTGTGGTG 217
|||||||| ||||||||||| || | ||| ||||||||||| ||||||||||| ||||||
Sbjct 381 ACTGATCTAAATGAGCTAGTTGAAAAGGAACCTTGGCTCTCGTCTGAGAAGCTGGTGGTG 440
Query 218 AAACCTGATATGTTGTTCGGAAAGCGTGGCAAAAGCGGTTTGGTTGCCTTGAAATTAGAT 277
|||||||| |||||||| |||||||||||||| || ||||||||||||||||||||||||
Sbjct 441 AAACCTGACATGTTGTTTGGAAAGCGTGGCAAGAGTGGTTTGGTTGCCTTGAAATTAGAT 500
Query 278 TTTGCTGATGTTGCTACTTTCGTGAAAGAACGGTTAGGCAAAGAGGTAGAGATGAGTGGA 337
|||||||||||||| ||||| || |||||||| || || |||||||||||||||||||||
Sbjct 501 TTTGCTGATGTTGCCACTTTTGTTAAAGAACGTTTGGGAAAAGAGGTAGAGATGAGTGGA 560
Query 338 TGCAAAGGACCCATAACAACGTTTATTGTTGAACCATTTGTCCCACACAATGAGGAGTTT 397
|||||||||||||||||||| || || |||||||||||||| |||||||||||||||| |
Sbjct 561 TGCAAAGGACCCATAACAACATTCATAGTTGAACCATTTGTTCCACACAATGAGGAGTAT 620
Query 398 TATCTTAATATTGTCTCTGATAGACTTGGCTGCAGCATTAGCTTTTCGGAGTGTGGAGGT 457
||||| ||| ||||||| ||| | ||||| |||||||| |||||||| |||||||||||
Sbjct 621 TATCTCAATGTTGTCTCGGATCGGCTTGGTTGCAGCATAAGCTTTTCTGAGTGTGGAGGA 680
Query 458 ATCGACATCGAGGAGAACTGGGACAAGGTCAAGACCATATCTATACCGACGGGTGCTTCC 517
|| || ||||||||||||||||||||||||||||| |||| | |||| || |||||||||
Sbjct 681 ATTGAGATCGAGGAGAACTGGGACAAGGTCAAGACAATATTTTTACCAACAGGTGCTTCC 740
Query 518 CTGACACCTGAGCTATGTGCACCTCTTGTTGCAACACTT-CCTCTAGAGATCAAAGGGGA 576
||||||||||| |||||||||||||||| ||||| ||| ||| |||||||||||| ||
Sbjct 741 CTGACACCTGAAATATGTGCACCTCTTGTCGCAACTCTTCCCT-TAGAGATCAAAGCTGA 799
Query 577 ACTTGAAGATTTTATTC-AAGTTATTTTTACCTTATTCGAAGATCTTGATTTCACTTTCT 635
| ||||||| |||| || |||| ||||| ||| ||||| |||||||||||||||||||||
Sbjct 800 AATTGAAGAATTTA-TCAAAGTCATTTTCACCCTATTCCAAGATCTTGATTTCACTTTCT 858
Query 636 TGGAGATGAATCCTTTCACAT-TGGTTGATGGAAAG-CCTTATCCTCTAGATATGAGGGG 693
||||||||||||||||||| | | |||||||| ||| ||||||||||| |||||||||||
Sbjct 859 TGGAGATGAATCCTTTCAC-TCTAGTTGATGG-AAGTCCTTATCCTCTGGATATGAGGGG 916
Query 694 TGAGCTTGATGACACCGCTGCTTTCAAAAACTTTAAGAAGTGGGGTGACATTGAATTCCC 753
|||||||||||| || ||||| |||||||||||||| || ||||| ||||||||||| ||
Sbjct 917 TGAGCTTGATGATACTGCTGCCTTCAAAAACTTTAAAAAATGGGGCGACATTGAATTTCC 976
Query 754 TATGCCATTTGGAAGAGTAATGAGTTCAACAGAAAGCTTCATCCACGGTCTAGATGAGAA 813
| ||||||||||||||||||||||| | ||||||||||| |||||||| || ||||||||
Sbjct 977 TCTGCCATTTGGAAGAGTAATGAGTCCTACAGAAAGCTTTATCCACGGACTGGATGAGAA 1036
Query 814 GACAAGTGCGTCTTTGAAGTTCACTGTTCTGAATCCCAAGGGAAGGATTTGGACTATGGT 873
||||||||||||||||||||| || |||||||| ||||||||| |||||||||| |||||
Sbjct 1037 GACAAGTGCGTCTTTGAAGTTTACCGTTCTGAACCCCAAGGGACGGATTTGGACAATGGT 1096
Query 874 AGCTGGAGGAGGTGCAAGTGTCATCTATGCCGATACCGTTGGAGATCTCGGGTATGCATC 933
|||||| ||||| ||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 1097 AGCTGGTGGAGGAGCAAGTGTCATCTATGCGGATACGGTTGGAGATCTCGGGTATGCATC 1156
Query 934 TGAGCTTGGAAATTATGCTGAATACAGTGGAGCACCCAAAGAAGACGAGGTTTTGCAGTA 993
||| ||||| || |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1157 TGAACTTGGCAACTATGCTGAATACAGTGGAGCACCCAAAGAAGATGAGGTTTTGCAGTA 1216
Query 994 CGCGAGAGTCGTCATCGATTGTGCTACAGCGAATCCGGATGGAAAAAGTAGAGCTCTGGT 1053
||| |||||||| || |||||||||||||| || |||||||||||||| ||||| || ||
Sbjct 1217 CGCCAGAGTCGTTATTGATTGTGCTACAGCAAACCCGGATGGAAAAAGCAGAGCCCTTGT 1276
Query 1054 AATCGGAGGAGGAATTGCTAACTTCACCGATGTTGCTGCTACCTTCAATGGCATAATCCG 1113
|||||||| |||||||| |||||||| || ||||||||||| |||||||||||||||||
Sbjct 1277 CATCGGAGGCGGAATTGCCAACTTCACTGACGTTGCTGCTACTTTCAATGGCATAATCCG 1336
Query 1114 AGCTCTCAAGGAAAAGGAAGCAAAGCTGAAAGCAGCAAGGATGCATATATTTGTGAGGAG 1173
||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1337 CGCTCTTAAAGAAAAGGAAGCAAAGCTGAAAGCAGCAAGGATGCATATATTTGTGAGGAG 1396
Query 1174 AGGAGGACCAAACTACCAAAAGGGACTTGCTAAAATGAGATCACTTGGAGATGAAATCGG 1233
||||||||||||||||||||||||||||||||||||| || | ||||||||||| |||||
Sbjct 1397 AGGAGGACCAAACTACCAAAAGGGACTTGCTAAAATGCGAGCCCTTGGAGATGATATCGG 1456
Query 1234 TGTCCCCATCGAGGTGTATGGTCCTGAAGCAACAATGACAGGTATCTGCAAGGAGGCAAT 1293
||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||
Sbjct 1457 TGTCCCCATCGAGGTCTATGGCCCAGAAGCAACCATGACAGGTATCTGCAAGGAGGCAAT 1516
Query 1294 CCAGTACATCACCGCGGCTGCATAAGC 1320
|||||||||||| || || ||||||||
Sbjct 1517 CCAGTACATCACAGCAGCAGCATAAGC 1543
Score = 117 bits (63), Expect = 3e-25
Identities = 83/92 (90%), Gaps = 4/92 (4%)
Strand=Plus/Plus
Query 56 AAGAAGATCAGAGAGTATGACTCAAAGAGACTGGTGAAAGAACACTTCAAAAGGCTTTCT 115
||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||
Sbjct 219 AAGAAGATCAGAGAGTATGACTCAAAGAGGTTGGTGAAGGAACATTTCAAAAGGCTTTCT 278
Query 116 GGTCAA-GAA-TTGCCTATCAGATCCGTTCAG 145
|| ||| || || ||||||||||||||||||
Sbjct 279 GG-CAAAGAGCTT-CCTATCAGATCCGTTCAG 308
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 71636177715
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5