BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475281
Length=2122
Score E
Sequences producing significant alignments: (Bits) Value
AT1G60500.1 | Symbols: DRP4C | Dynamin related protein 4C | chr... 2959 0.0
AT1G60540.1 | Symbols: DRP4B | pseudogene of the dynamin family... 1600 0.0
AT1G60510.1 | Symbols: DRP4D | pseudogene, putative interferon-... 1445 0.0
AT1G60545.1 | Symbols: | other RNA | chr1:22302492-22305156 FO... 1227 0.0
AT1G60505.1 | Symbols: | other RNA | chr1:22294677-22297220 RE... 1138 0.0
AT1G60530.1 | Symbols: DRP4A | Dynamin related protein 4A | chr... 939 0.0
AT1G60525.1 | Symbols: | other RNA | chr1:22299541-22301305 RE... 387 3e-106
> AT1G60500.1 | Symbols: DRP4C | Dynamin related protein 4C | chr1:22291582-22293964
FORWARD LENGTH=2152
Length=2152
Score = 2959 bits (1602), Expect = 0.0
Identities = 1928/2088 (92%), Gaps = 11/2088 (1%)
Strand=Plus/Plus
Query 12 TAAGAAGAAAGTTGTGACTaaaaaaaCCTCTCCTCCTCTCTCAATTGCCATAAAGAAGTC 71
|||||||||||||| |||||||||| ||||||| ||||| ||||||||| |||||||||
Sbjct 6 TAAGAAGAAAGTTGCCACTAAAAAAAACTCTCCTTCTCTCGCAATTGCCAAAAAGAAGTC 65
Query 72 CCGTGGCAACAAAGATGTTGTTCCTGTTGAAGCACCGATTGTATCTTCGTATAATGATCA 131
|||| ||||||||||||||||| ||||||||||||||||| ||||||| ||||| ||||
Sbjct 66 CCGTAGCAACAAAGATGTTGTTTCTGTTGAAGCACCGATTATATCTTCATATAACGATCG 125
Query 132 AATCAGGCCGTTGCTTGACACTGTGGACAG-GTTAAGGAACCTCAATGTGATGAGAGAAG 190
|| |||||||||||||||||||||||||| || |||||||||||||| ||||||||||
Sbjct 126 GATAAGGCCGTTGCTTGACACTGTGGACAGACTT-AGGAACCTCAATGTCATGAGAGAAG 184
Query 191 GGATCCATCTTCCCACCATTGTCGTGGTTGGAGACCAGTCGTC-GGGAAAGTCAAGTGTT 249
|||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||
Sbjct 185 GGATCCATCTTCCCACCATTGTCGTGGTTGGAGACCAGTCCTCAGGG-AAGTCAAGTGTT 243
Query 250 CTTGAATCCTTGGCAGGAATCAGTTTGCCTCGTGGGCAAGGAATCTGCACTAGGGTTCCT 309
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 244 CTTGAATCCTTGGCAGGAATCAGTTTACCTCGTGGCCAAGGAATCTGCACTAGGGTTCCT 303
Query 310 CTTGTCATGAGGCTTCAGCGAAGCTCTAGCCCTGAACCTGAGATCTGGCTTGAGTATAGC 369
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct 304 CTTGTCATGAGGCTTCAGCGAAGCTCTAGCCCTGAACCTGAGATTTGGCTTGAGTATAAC 363
Query 370 GACAAAGTGGTTCCTACGGACGAGGAACACATCGCTGAAGCTATTCGTGCTGCGACAGAT 429
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 364 GACAAAGTGGTTCCTACGGACGAGGAACACATCGCTGAAGCTATTCGTGCTGCAACAGAT 423
Query 430 GTGATTGCTGGATCTGGTAAAGGGGTCTCAGACGCTCCCTTGACCCTCCATGTGAAGAAG 489
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 424 GTGATTGCTGGATCTGGTAAAGGGGTCTCAGATGCTCCATTGACCCTCCATGTGAAGAAG 483
Query 490 GCTGGTGTTCCAGATCTTACAATGGTCGATCTTCCCGGTATAACTCGAGTTCCGGTCAAT 549
|||||||||||||| ||||| |||||||||||||||||||||||||||||||| || |||
Sbjct 484 GCTGGTGTTCCAGACCTTACGATGGTCGATCTTCCCGGTATAACTCGAGTTCCAGTGAAT 543
Query 550 GGTCAACCGGAAAATATTTATGAGCAGATCTCTGGGATGATTATGGAGTACATTGAGCCT 609
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 544 GGACAGCCGGAAAATATTTATGAGCAGATCTCTGGGATGATTATGGAGTACATTGAGCCT 603
Query 610 CAAGAATCAATAATCCTCAACGTTCTTTCAGCTACGGTCGACTTCACAACCTGCGAATCC 669
|||||||||||||||||||| ||||| |||||||||||||||||||| || |||||||||
Sbjct 604 CAAGAATCAATAATCCTCAATGTTCTGTCAGCTACGGTCGACTTCACCACATGCGAATCC 663
Query 670 ATTCGCATGTCTAAAAAAGTGGACAAAACCGGTCAACGTACTCTGGCTGTTGTGACAAAG 729
||||||||||||| |||||| ||||||||||||||||| || || |||||||||||||||
Sbjct 664 ATTCGCATGTCTAGAAAAGTTGACAAAACCGGTCAACGGACACTAGCTGTTGTGACAAAG 723
Query 730 GCTGACATGGCTCCTGAAGGTCTTTTGCAGAAAGTAACAGCAGATGATGTGAGTATTGTA 789
|| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 724 GCAGACATGGCTCCTGAAGGTCTCTTGCAGAAAGTAACTGCAGATGATGTGAGTATTGTT 783
Query 790 CTTGGTTATGTGTGCGTCAGAAACCGCATTGGAGAAGAGACATATGAAGAAGCTAGGATG 849
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 784 CTTGGTTACGTGTGCGTCAGAAACCGCATTGGAGAAGAGACATATGAAGAAGCAAGGATG 843
Query 850 CATGAAGAATTACTTTTCAAGACTCATCCATTGCTAAGCTTGATTGATGAAGACATCGTG 909
|| ||||| |||||||||| ||| |||||| ||||||| || |||||||||||||| |||
Sbjct 844 CAAGAAGAGTTACTTTTCAGGACCCATCCAGTGCTAAGTTTAATTGATGAAGACATAGTG 903
Query 910 GGAAACCCTGTGTTAGCTCAGAAGCTAATGCTTATCCAAGCAAGCATGATTGCCAGATGT 969
|||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct 904 GGAATCCCTGTGTTAGCTCAGAAGCTAATGCTTATCCAATCAAGCATGATTGCTAGATGT 963
Query 970 TTGCCTAATATTGTACGCAAGATCAACCAGAAATTGGACACCGCTGTTCTTGAGTTAAAC 1029
|||||||| |||||| |||||||||||||||| |||||||| |||||||| ||||| |||
Sbjct 964 TTGCCTAAAATTGTAAGCAAGATCAACCAGAAGTTGGACACTGCTGTTCTAGAGTTGAAC 1023
Query 1030 AAGCTACCAATGGTAATGGCTTCTACAGGGGAAGCATTAATGGCGTTGATGAATATTATT 1089
|| || |||||||||||||||||||| ||||||||||| ||||| |||||| | || |||
Sbjct 1024 AAACTGCCAATGGTAATGGCTTCTACCGGGGAAGCATTGATGGCATTGATGGACATCATT 1083
Query 1090 GGTTCTGCTAAAGAATCTCTATTGAGAATTCTTGTCCAAGGAGACTTCTCTGAATACCCG 1149
|||||||| ||||| || || || || ||||| ||||||||||||||||||||||||||
Sbjct 1084 GGTTCTGCCAAAGAGTCCCTCTTAAGGATTCTAGTCCAAGGAGACTTCTCTGAATACCCA 1143
Query 1150 GATGATCAAAACATGCATTGTACTGCTCGTTTGGCTGATATGTTAAGTCAATTCTCTGAT 1209
|||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 1144 GATGATCAGAACATGCATTGTACTGCTCGCTTGGCTGATATGTTAAGCCAATTCTCTGAT 1203
Query 1210 -GATCTGCAAGCAAAGCCAAAGGATGTGACTGAGTTCTTGATGGATGAGATCAAGATTCT 1268
| |||||||||||||||||| || ||| | |||||||||||||||||||||||||| ||
Sbjct 1204 AG-TCTGCAAGCAAAGCCAAAAGAAGTGGCCGAGTTCTTGATGGATGAGATCAAGATCCT 1262
Query 1269 TGATGAATGCAAATGTGTTGGACTGCCTAATTTCATCCCTAGATCAGCCTTCTTTGCTAT 1328
||| |||||||| |||||||||||||| ||||||||||| || ||||||||||| |||||
Sbjct 1263 TGACGAATGCAAGTGTGTTGGACTGCCCAATTTCATCCCCAGGTCAGCCTTCTTGGCTAT 1322
Query 1329 TCTTTCACAACATGTTGATGAAATACATGACAAGCCAGTTGAATTCATCAACAAGATATG 1388
||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||
Sbjct 1323 ACTTTCACAACATGTTGATGGTATACAAGACAAGCCAGTTGAGTTCATCAACAAGATATG 1382
Query 1389 GGACTACATTGAAGTTGTTCTCTCATCAGTCATTTCTAAGCATTCTGACAATTTCCCACA 1448
|||||||||||||| |||||||||||| |||| | |||||| ||||||||||||||||||
Sbjct 1383 GGACTACATTGAAGATGTTCTCTCATCCGTCACTGCTAAGCGTTCTGACAATTTCCCACA 1442
Query 1449 GATTCAATCTTCCATCAAACGAGCCGGTCGCAATCTAATATCCAAGATCAAAGAACAATC 1508
|||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||
Sbjct 1443 GATTCAATCTTCCATCAAACGAGCCGGTCGTAATCTCATCTCCAAGATCAAAGAACAATC 1502
Query 1509 TGTGAATCGAGTGATGGAGATAGTTGAGATGGAGAAGCTGACGGATTACACATGTAGCCC 1568
||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||
Sbjct 1503 TGTGAATCGAGTGATGGAGATCGTTGAGATGGAGAAGCTGACTGATTACACATGTAACCC 1562
Query 1569 TGAGTATATGACGTCTTGGACTCAGAAGACTGGTGAACAAGAGAGCTTCAT-GTATGATG 1627
|||||| ||||||||||||||||||||||| ||| ||||||||||||||| | ||| ||
Sbjct 1563 TGAGTACATGACGTCTTGGACTCAGAAGACAAGTGCACAAGAGAGCTTCATCG-ATGCTG 1621
Query 1628 TTTTGAAAAATGGGAACAAACCTGACTACTTCTCTATGAGTGGATTTGGGAATGTGAAGA 1687
|| ||||||||| ||||| |||||||||||||||| ||| ||||||||| ||||||||||
Sbjct 1622 TTGTGAAAAATGAGAACATACCTGACTACTTCTCTGTGACTGGATTTGGAAATGTGAAGA 1681
Query 1688 TCTCGCATCTACGAAAGTATCACGCTCATTTACTGATTCCGGCTTTCGACATGAAGATAA 1747
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1682 TTTCGCATCTACGAAAGTATCACGCTCATTTACTGATTCCGGCTTTCGACATGAAGATGA 1741
Query 1748 GAATCACATCCTACTGGAATATCGTCCTACGGAGAATTGTAGATAACCTTGCTCTGTATC 1807
| |||||||| |||||||| |||||||| |||||||| ||||| |||||||| |||||||
Sbjct 1742 GGATCACATCTTACTGGAAGATCGTCCTGCGGAGAATCGTAGACAACCTTGCACTGTATC 1801
Query 1808 TTCAGCTATCTGTGAAGTCTCTCGTAAACTGTCAATTTCAGAAGGAGATTGTGGCGGAGA 1867
||||||||||||||||||||||||| ||| || |||||||||||||||||||||||| |
Sbjct 1802 TTCAGCTATCTGTGAAGTCTCTCGTCAACACTCGATTTCAGAAGGAGATTGTGGCGGAAA 1861
Query 1868 TGGTGGATCCAAGAGATGGCGGAGGAGTTGAAAAGATGTTGGAGGAATCTCCGTCGGTGG 1927
|||| |||||||||||||| |||||||||||||||||||||||||| ||||||| |||||
Sbjct 1862 TGGTTGATCCAAGAGATGGTGGAGGAGTTGAAAAGATGTTGGAGGAGTCTCCGTTGGTGG 1921
Query 1928 CGAGTAAGAGGGAGAAGCTGAAGAATAGTATCAAGCTCTTGAAGGAGTCCAAGGATGCTG 1987
|||| || ||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct 1922 CGAGCAAAAGGGAGAAGCTTCAGAATAGTATCAAGCTCTTGAAGGAGTCTAAGGATGCTG 1981
Query 1988 TGGCCGCCATTGTTGATCAGAATTGTTAAGCGATTGCTTCTTTCACAAGCTTTGGTGAAA 2047
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1982 TGGCCGCCATTGTTGATCAAAATTGTTAAGCGATTGCTTCTTTCACAAGCTTTGGTGAAA 2041
Query 2048 TTAGGTCGGGTTAGGAGATCGT--T-GATTGATTTGCTTCGGTGAAGT 2092
| |||| ||||| |||||||| | |||| ||||| |||||||||||
Sbjct 2042 TCGGGTCAGGTTAAGAGATCGTCCTTGATTTATTTGTTTCGGTGAAGT 2089
> AT1G60540.1 | Symbols: DRP4B | pseudogene of the dynamin family
| chr1:22302486-22304985 REVERSE LENGTH=2031
Length=2031
Score = 1600 bits (866), Expect = 0.0
Identities = 1606/1961 (82%), Gaps = 59/1961 (3%)
Strand=Plus/Plus
Query 80 ACAAAGATGTTGTTCCTGTTGAAGCACCGATTGTATCTTCGTATAATGATCAAATCAGGC 139
|||||||||||||||| |||||||| |||||||| || || ||||| || |||||||
Sbjct 77 ACAAAGATGTTGTTCCCACAGAAGCACCAATTGTATCATCTTACAATGACCACATCAGGC 136
Query 140 CGTTGCTTGACACTGTGGACAGGTTAAGGAACCTCAATGTGATG-AGAGAAGGGATCCAT 198
||||||||||||||||||||| | | |||||| | ||||||||| | ||||||||| ||
Sbjct 137 CGTTGCTTGACACTGTGGACAAGCTCAGGAACTTGAATGTGATGCA-AGAAGGGATTCAG 195
Query 199 CTTCCCACCATTGTCGTGGTTGGAGACCAGTCGTCGGGAAAGTCAAGTGTTCTTGAATCC 258
||||| |||||||| ||||||||||||||||| ||||| ||||| ||||| || || ||
Sbjct 196 CTTCCTACCATTGTTGTGGTTGGAGACCAGTCCTCGGGGAAGTCGAGTGTCCTCGAGTCG 255
Query 259 TTGGCAGGAATCAGTTTGCCTCGTGGGCAAGGAATCTGCACTAGGGTTCCTCTTGTCATG 318
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 256 TTGGCAGGAATCAGTTTGCCACGTGGGCAAGGAATCTGCACTAGAGTTCCTCTTGTCATG 315
Query 319 AGGCTTCAGCGAAGCTC-TAGCCCTGAACCTGAGATCTGGCTTGAGTATAGCGACAAAGT 377
||||| ||| |||| || ||||||||||||||||||||||| ||||| | |||||| |
Sbjct 316 AGGCTCCAGAGAAG-TCGAAGCCCTGAACCTGAGATCTGGCTGGAGTACGGTGACAAAAT 374
Query 378 GGTTCCTACGGACGAGGAACACATCGCTGAAGCTATTCGTGCTGCGACAGATGTGATTGC 437
|||||||| || ||||||||||| ||| || ||||| |||| || ||||| ||||| ||
Sbjct 375 TGTTCCTACAGATGAGGAACACATTGCTCAAACTATTTGTGCAGCTACAGACGTGATAGC 434
Query 438 TGGATCTGGTAAAGGGGTCTCAGACGC-TCCCTTGACCCTCCATGTGAAGAAGGCTGGTG 496
||||||||| |||||||| |||||| | ||||| || ||||||||||||||||||||||
Sbjct 435 TGGATCTGGCAAAGGGGTTTCAGACACACCCCTT-ACGCTCCATGTGAAGAAGGCTGGTG 493
Query 497 TTCCAGATCTTACAATGGTCGATCTTCCC-GGTATAACTCGAGTTCCGGTCAATGGTCAA 555
|||||||| |||| ||||| ||||| ||| || ||||| || ||||| || || || ||
Sbjct 494 TTCCAGATATTACTATGGTTGATCT-CCCTGGAATAACCCGTGTTCCTGTGAACGGACAG 552
Query 556 CCGGAAAATATTTATGAGCAGATCTCTGGGATGATTATGGAGTACATTGAGCCTCAAGAA 615
|| |||||||||||||| ||||| || ||||| ||||| |||| |||||||| ||||||
Sbjct 553 CCTGAAAATATTTATGAACAGATTTCCAGGATGGTTATGAAGTATATTGAGCCACAAGAA 612
Query 616 TCAATAATCCTCAACGTTCTTTCAGCTACGGTCGACTTCACAACCTGCGAATCCATTC-G 674
||||| || ||||| ||||| ||||| || || || ||||| || || |||||||| | |
Sbjct 613 TCAATCATACTCAATGTTCTGTCAGCGACAGTTGATTTCACTACTTGTGAATCCAT-CAG 671
Query 675 CATGTCTAAAAAAGTGGACAAAACCGGTCAACGTACTCTGGCTGTTGTGACAAAGGCTGA 734
||||||||| | ||||||||||||||| | || ||||||||||| || |||||||||||
Sbjct 672 AATGTCTAAACAGGTGGACAAAACCGGTGAGCGGACTCTGGCTGTAGTCACAAAGGCTGA 731
Query 735 CATGGCTCCTGAAGGTCTTTTGCAGAAAGTAACAGCAGATGATGTGAGTATTGTACTTGG 794
||||||||||||||| ||| | ||||||||||| ||||||||||||||||| | ||||||
Sbjct 732 CATGGCTCCTGAAGGGCTTCTCCAGAAAGTAACTGCAGATGATGTGAGTATCGGACTTGG 791
Query 795 TTATGTGTGCGTCAGAAACCGCATTGGAGAAGAGACATATGAAGAAGCTAGGATGCATGA 854
|||||| || || |||||||| || || || || || |||||||||||| | ||||| ||
Sbjct 792 TTATGTCTGTGTTAGAAACCGGATAGGGGAGGAAACCTATGAAGAAGCTCGAATGCAAGA 851
Query 855 AGAATTACTTTTCAAGACTCATCC-ATTGCTAAGCT-TGATTGATGAAGACATCGTGGGA 912
||| |||||||||| ||| || || || ||| | |||| |||| || || |||||
Sbjct 852 AGAGTTACTTTTCAGGACCCACCCGAT-GCTTT-CAATGATCAATGATGAGATTGTGGGT 909
Query 913 AACCCTGTGTTAGCTCAGAAGCTAATGCTTATCCAAGCAA-GCATGAT-TGCCAGATGTT 970
| ||| || |||||||||||||| | || ||||| | || | ||||| | | || ||||
Sbjct 910 ATCCCCGTCTTAGCTCAGAAGCTGACGCAGATCCAGGGAATG-ATGATAT-CTAGGTGTT 967
Query 971 TGCCT-AATATTGTACGCAAGATCAACCAGAA-ATTGGACACC-GCTGTTCTTGAGTTAA 1027
|||| || || | | | ||||| || ||| || ||| | | | ||| || ||||| |
Sbjct 968 TGCCGGAA-ATCGAAAGGAAGATAAATGTGAAGAT-GGAAATCAG-TGTCCTGGAGTTTA 1024
Query 1028 ACAAGCTACCAATGGTAATGGCTTCTACAGGGGAAGCATTAATGGCGT-TGATGAATATT 1086
||||||| ||||| || ||||||||||| ||||||||||||||| | | | ||| ||||
Sbjct 1025 ACAAGCTCCCAATAGTCATGGCTTCTACTGGGGAAGCATTAATGTC-TCTAATGGATATC 1083
Query 1087 ATTGGTTCTGCTAAAGAATCTCTATTGAGAATTCTTGTCCAAGGAGACTTCTCTGAATAC 1146
||||||||||| || || |||||| | ||||| |||||||| ||||| ||||||||||||
Sbjct 1084 ATTGGTTCTGCCAAGGAGTCTCTACTAAGAATCCTTGTCCATGGAGATTTCTCTGAATAC 1143
Query 1147 CCGGATGATCAAAACATGCATTGTACTGCTCGTTTGGCTGATATGTTAAGTCAATTCTCT 1206
|| | |||||||| |||||||| || ||||| |||||||| ||||||| | ||||||
Sbjct 1144 CCTAACGATCAAAAGATGCATTGCACAGCTCGCTTGGCTGAAATGTTAAACCGATTCTCA 1203
Query 1207 GATGATCTGCAAGCAAAGCCA-AAGGATGTGACTGA-G--TTCTTGATGGATGAGATCAA 1262
|| ||||||| ||| |||| ||| ||||| || | |||||||||||||| |||||
Sbjct 1204 GACAATCTGCAGGCACAGCCTCAAGCC-GTGACAGAAGAGTTCTTGATGGATGAAATCAA 1262
Query 1263 GATTCTT-GATGAATGCAAATGTGTTGGACTGCCTAATTTCATCCCTAGATCAGCCTTCT 1321
| |||| || || |||||||| | ||| |||||||||| || || ||||| | ||||
Sbjct 1263 -AGTCTTAGAAGAGCGCAAATGTATCGGATTGCCTAATTTTATACCAAGATCTTCTTTCT 1321
Query 1322 TTGCTATTCTTTCACAACATGTTGATGAAATACATGACAAGCCAGTTGAATTCATCAACA 1381
| || || |||||||||||||| |||| ||||| |||||||||||||| ||||||||
Sbjct 1322 TAGCAATCCTTTCACAACATGTGGATGGGATACAAGACAAGCCAGTTGAGTTCATCAAGG 1381
Query 1382 AGATATGGGACTACATTGAAGTTGTTCTCTCATCAGTCATTTCTA-AGCATTCTGACAA- 1439
|||||||||||||||||||||| ||||| |||||||||||| | | | ||||||||||
Sbjct 1382 AGATATGGGACTACATTGAAGTCGTTCTGTCATCAGTCATTACGACAT-ATTCTGACAAC 1440
Query 1440 TTTCCCACAGATTCAATCTTCCATCAAACGAGCCGGTCGCAATCTAAT-ATCCAAGATCA 1498
|||||| ||||||||||| ||||||||| | || ||||| |||||||| | | | || |
Sbjct 1441 TTTCCC-CAGATTCAATCCTCCATCAAAAGGGCTGGTCGTAATCTAATGAGC-AGGA-CT 1497
Query 1499 AAG-AACAATCTGTGAA-TCGAGTGATGGAGATAGTTGAGATGGAGAAGCTGACGGATTA 1556
||| ||| || ||||| | |||| || ||||| ||||||||||||||||| || |||||
Sbjct 1498 AAGGAACGTTCCGTGAACT-GAGTAATTGAGATCGTTGAGATGGAGAAGCTTACCGATTA 1556
Query 1557 CACATGTAGCCCTGAGTATATGACGTCTTGGACTCAGAAGACTGG-TGA-A-CAAGAGAG 1613
|||||||| ||| || || ||||| ||||||||||||||||| | | | ||| | |
Sbjct 1557 CACATGTAACCCAGATTACATGACTTCTTGGACTCAGAAGACAACCTCACAGCAA-A-A- 1613
Query 1614 CTTCATGTATGATGTTTTGAAAAATGGGAACAAACCTGACTACTTCT-CTATGAG-TGGA 1671
|||||| || ||| ||| | ||| ||| |||||||| | || | || | | ||||
Sbjct 1614 CTTCATCAATTCTGTGTTGCACGATGAGAATAAACCTGAGAATTT-TGCTTT-ACCTGGA 1671
Query 1672 TTTGGGAATGTGAAGATCTCGCATCTACGAAAGTATCACGCTCATTTACTG-ATTCCGGC 1730
|| ||| ||||||||||||||||||| |||||||||||||||||||| ||| | | ||
Sbjct 1672 TTCGGGGATGTGAAGATCTCGCATCTGCGAAAGTATCACGCTCATTTGCTGCAA-CAAGC 1730
Query 1731 -TTTCGACATGAAGATAAGAATCACATCCTACTGGAATATCGTCCTACGGAGAATTGTAG 1789
||| || |||||||| || |||||||| ||||||| ||||| | || || |||| |
Sbjct 1731 GTTT-GATATGAAGATGAGGATCACATCTTACTGGACGATCGTATTGCGAAGGGTTGTCG 1789
Query 1790 ATAACCTTGCTCTGTATCTTCAGCTATCTGTGAAGTCTCTCGTAAACTGTCAATTTCAGA 1849
||||||||||||| || ||||| | ||||||||| ||| || ||| |||| |||||||
Sbjct 1790 ATAACCTTGCTCTCTACCTTCAATTCTCTGTGAAGAATCTGGTCAACAGTCAGTTTCAGA 1849
Query 1850 AGGAGATTGTGGCGGAGATGGTGGATCCAAGAGATGGCGGAGGAGTTGAAAAGATGTTGG 1909
||||||||||||||||||||||||||||||||| |||||||||| | || | |||| |||
Sbjct 1850 AGGAGATTGTGGCGGAGATGGTGGATCCAAGAGCTGGCGGAGGAATAGATAGGATGCTGG 1909
Query 1910 AGGAATCTCCGTCGGTGGCGAGTAAGAGGGAGAAGCTGAAGAATAGTATCAAGCT-CTTG 1968
||||||| |||||||||||||| |||||||||||||||||||||||| ||||||| || |
Sbjct 1910 AGGAATCACCGTCGGTGGCGAGCAAGAGGGAGAAGCTGAAGAATAGTCTCAAGCTTCT-G 1968
Query 1969 AAGGAGTCCAAGGATGCTGTGGCCGCCATTGTTGATCAGAA 2009
||||| |||||||| | |||||| |||||||||||||||||
Sbjct 1969 AAGGAATCCAAGGACGTTGTGGCGGCCATTGTTGATCAGAA 2009
> AT1G60510.1 | Symbols: DRP4D | pseudogene, putative interferon-induced
GTP-binding protein mx, blastp match of 42% identity
and 8.3e-35 P-value to GP|1399454|gb|AAC60215.1||U47946 RBTMx3
{Oncorhynchus mykiss} | chr1:22294722-22297139 FORWARD
LENGTH=2418
Length=2418
Score = 1445 bits (782), Expect = 0.0
Identities = 1295/1538 (84%), Gaps = 54/1538 (4%)
Strand=Plus/Plus
Query 435 TGCTGGATCTGGTAAAGGGGTCTCAGACGCTCCCTTGACCCTCCATGTGAAGAAGGCTGG 494
||| |||||||| |||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 919 TGCAGGATCTGGCAAAGGGGTCTCAGACGCTCCATTGACCCTCCATGTTAAGAAGGCTGG 978
Query 495 TGTTCCAGATCTTACAATGGTCGATCTTCCCGGTATAACTCGAGTTCCGGTCAATGGTCA 554
|| ||| ||||||| |||||||||||||||||||||||||||| || || ||||| ||
Sbjct 979 GGTCCCATATCTTACCATGGTCGATCTTCCCGGTATAACTCGAG-GCCAGTGAATGGACA 1037
Query 555 ACCGGAAAATATTTATGAGCAGATCTCTGGGATGATTATGGAGTACATTGAGCCTCAAGA 614
|||||| |||||||| || ||||| ||||||||||| ||| ||||||| ||||| |||||
Sbjct 1038 ACCGGAGAATATTTACGAACAGATTTCTGGGATGATCATGAAGTACATCGAGCCACAAGA 1097
Query 615 ATCAATAATCCTCAACGTTCTTTCAGCTACGGTCGACTTCACAACCTGCGAATCCATTCG 674
||||||||||||||| ||||| |||||||| ||||||||||| ||||| ||||||| ||
Sbjct 1098 ATCAATAATCCTCAATGTTCTGTCAGCTACAGTCGACTTCACCACCTGTGAATCCA-TC- 1155
Query 675 CATGTCTAAAAAAGTGGACAAAACCGGTCAACGTACTCTGGCTGTTGTGACAAAGGCTGA 734
| | | | || | || | | | |||||||| ||||| || ||||| ||
Sbjct 1156 C--G--T----ATGT-G----AA-C-G-----G-ACTCTGGCCGTTGTCACCAAGGCAGA 1194
Query 735 CATGGCTCCTGAAGGTCTTTTGCAGAAAGTAACAGCAGATGATGTGAGTATT-GTACTTG 793
||||||||| |||||||| | ||||||||||| || ||||||||||||||| || || |
Sbjct 1195 CATGGCTCCCGAAGGTCTCCTACAGAAAGTAACTGCGGATGATGTGAGTATTGGT-CTAG 1253
Query 794 GTTATGTGTGCGTCAGAAACCGCATTGGAGAAGAGACATATGAAGAAGCTAGGATGCATG 853
|||| || || |||||||||||||||||||||||| | |||||| ||||||| ||||| |
Sbjct 1254 GTTACGTCTGTGTCAGAAACCGCATTGGAGAAGAG-CGTATGAACAAGCTAGAATGCAAG 1312
Query 854 AAGAATTACTTTTCAAGACTCATCC-ATTGCTAAGCTTGATTGATGAAGACATCGTGGGA 912
|||| || || |||| |||||| || | |||| |||||||||||||||||||||||||||
Sbjct 1313 AAGAGTTGCTCTTCAGGACTCACCCGA-TGCTGAGCTTGATTGATGAAGACATCGTGGGA 1371
Query 913 AACCCTGTGT-TAGCTCAGAAGCTAATGCTTATCCAAGCAAGC-ATGATTGCCAGATGTT 970
| |||||| | |||||||||||||||||||||||||||||| | |||||| || | ||||
Sbjct 1372 ATCCCTGT-TATAGCTCAGAAGCTAATGCTTATCCAAGCAA-CGATGATTTCCCGCTGTT 1429
Query 971 TGCCT-AATATTGTACGCAAGATCAACCAGAA-ATTGGACACCGCTGTTCTTGAGTTAAA 1028
||||| || || || ||||||||||| || || | |||| || ||||| || ||||| ||
Sbjct 1430 TGCCTGAA-ATCGTTCGCAAGATCAATCACAAGA-TGGAAACTGCTGTCCTGGAGTTGAA 1487
Query 1029 CAAGCTACCAATGGTAATGGCTTCTACAGGGGAAGCATTAATGGCGTTGATGAATATTAT 1088
||||||||| ||||| ||||||||||| || |||||||| ||||| |||||| | || ||
Sbjct 1488 CAAGCTACCGATGGTTATGGCTTCTACCGGAGAAGCATTGATGGCATTGATGGACATCAT 1547
Query 1089 TGGTTCTGCTAAAGAATCTCTATTGAGAATTCTTGTCCAAGGAGACTTCTCTGAATACCC 1148
||||||||| || || || || || ||||| ||||||||||||||||||||||||| |||
Sbjct 1548 TGGTTCTGCCAAGGAGTCCCTCTTCAGAATCCTTGTCCAAGGAGACTTCTCTGAATTCCC 1607
Query 1149 GGATGATCAAAACATGCATTGTACTGCTCGTTTGGCTGATATGTTAAGTCAATTCTCTGA 1208
|||||| || |||||||| |||||||||||||||||||| |||||||| |||||||| ||
Sbjct 1608 GGATGACCAGAACATGCACTGTACTGCTCGTTTGGCTGACATGTTAAGCCAATTCTCCGA 1667
Query 1209 TGATCTGCAAGCA-AAGCCAAAGGATGTGACTGAGTTCTTGATGGATGAGATCAAGATTC 1267
| ||||||||| | ||||||||||| ||||| |||||||||||| ||||||||||||| |
Sbjct 1668 TAATCTGCAAG-AGAAGCCAAAGGAAGTGACCGAGTTCTTGATGAATGAGATCAAGATCC 1726
Query 1268 TTGATGAATGCAAATGTGTTGGACTGCCTAATTTCATCCCTAGATCAGCCTTCTTTGCTA 1327
|||| |||||||| |||||||||||||| ||||||||||| || ||||||||||| ||||
Sbjct 1727 TTGACGAATGCAAGTGTGTTGGACTGCCCAATTTCATCCCCAGGTCAGCCTTCTTGGCTA 1786
Query 1328 TTCTTTCACAACATGTTGATGAAATACATGACAAGCCAGTTGAATTCATCAACAAGATAT 1387
| || |||||||| | |||| ||||||| |||||| || || |||||||| |||||||
Sbjct 1787 TACTATCACAACACGAAGATGCCATACATGTCAAGCCCGTGGAGTTCATCAAGAAGATAT 1846
Query 1388 GGGACTACATTGAAGTTGTTCTCTCATCAGTCATTTCTAAGCATTCTGACAATTTCCCAC 1447
|||||||||||||||||||||||||||| |||||| | ||| ||||||| || |||||||
Sbjct 1847 GGGACTACATTGAAGTTGTTCTCTCATCCGTCATTGCCAAGTATTCTGAAAACTTCCCAC 1906
Query 1448 AGATTCAATCTTCCATCAAACGAGCCGGTCGCAATCTAAT-ATCCAAGATCAAAGAACAA 1506
|||| |||||| |||||||||| || ||||| |||||||| | |||||||||| |||||
Sbjct 1907 AGATCCAATCTGCCATCAAACGTGCTGGTCGAAATCTAATCA-CCAAGATCAAGGAACAC 1965
Query 1507 TCTGTGAATCGAGTGATGGAGATAGTTGAGATGGAGAAGCTGACGGATTACACATGTAGC 1566
|||||| | |||||| ||||||| ||||| |||||||||||||| ||||||||||||| |
Sbjct 1966 TCTGTGGAGCGAGTGTTGGAGATTGTTGAAATGGAGAAGCTGACTGATTACACATGTAAC 2025
Query 1567 CCTGAGTATATGACGTCTTGGACTCAGAAGACTGGTGAACAAGAGAGCTTCATGTATGAT 1626
|||||||| ||||||||||||||||||| ||||| ||||||| | | |||||| |||| |
Sbjct 2026 CCTGAGTACATGACGTCTTGGACTCAGATGACTGCTGAACAACAAAACTTCATTTATGCT 2085
Query 1627 GTTTTGAAAAATGGGAACAAA-CCTGA-CTACTTCTC-TATGAGTGGATTT-G-GGAA-T 1680
|| ||| ||||||| ||| ||||| | ||||||| | ||| ||||||| | |||| |
Sbjct 2086 GTGTTGTCCGATGGGAA-AAAGCCTGAGC-ACTTCTCGT-TGACTGGATTTGGTGGAATT 2142
Query 1681 GTGAAGATCTCGCATCTACGAAAGTATCACGCTCATTTACTG-ATTCCGGCTTTCGACAT 1739
||||||||||| || ||||| |||||||| |||||| | ||| | | || ||||| ||
Sbjct 2143 GTGAAGATCTCTCACCTACGGAAGTATCATGCTCATCTCCTGCA-GCAAGCCTTCGATAT 2201
Query 1740 GAAGATAAGAATCA-CATCCTACTGGAATATCGTCCTACGGAGAATTGTAGATAACCTTG 1798
|||||| || || | |||| ||||||| || ||| |||| || ||||| || | ||||
Sbjct 2202 GAAGATGAGGAT-AGCATCTTACTGGACGATAGTCTTACGAAGGATTGTGGACAGTCTTG 2260
Query 1799 CTCTGTATCTTCAGCTATCTGTGAAGTCTCTCGTAAACTGTCAATTTCAGAAGGAGATTG 1858
|||||||||||||||| || |||||| |||||| || | | | ||||||||||||||||
Sbjct 2261 CTCTGTATCTTCAGCTGTCAGTGAAGAATCTCGTGAATTATTAGTTTCAGAAGGAGATTG 2320
Query 1859 TGGCGGAGATGGTGGATCCAAGAGATGGCGGAGGAGTTGAAAAGATGTTGGAGGAATCTC 1918
|||||||||||||||||||||||| ||||||||| || | | |||| | ||||| || |
Sbjct 2321 TGGCGGAGATGGTGGATCCAAGAGCTGGCGGAGGTCTTCAGAGGATGCTAGAGGAGTCGC 2380
Query 1919 CGTCGGTGGCGAGTAAGAGGGAGAAGCTGAAGAATAGT 1956
||||||||||||| ||||| |||||||||||||| |||
Sbjct 2381 CGTCGGTGGCGAGCAAGAGAGAGAAGCTGAAGAACAGT 2418
Score = 446 bits (241), Expect = 5e-124
Identities = 378/442 (86%), Gaps = 18/442 (4%)
Strand=Plus/Plus
Query 8 GTAGTAAGAAGAAAGTTGTGACTaaaaaaaCCTCTCCTCC-TCTC-T-CAATTG-CCATA 63
||||||||||| | ||||| ||| | ||||||| |||| |||| | |||||| |||
Sbjct 8 GTAGTAAGAAGCATGTTGTCACT---AGAACCTCTTCTCCTTCTCTTGCAATTGTCCA-G 63
Query 64 AAGAAGTCC-CGTGGCAACAAAGATGTTGTTCCTGTTGAAGCACCGATTGTATCTTCGTA 122
||| ||| | || ||||| ||| |||||||| | |||||||||||| ||||||| ||
Sbjct 64 GCGAA-TCCTCATGACAACAGAGAAGTTGTTCCCATCGAAGCACCGATTATATCTTCATA 122
Query 123 TAATGATCA-AATCAGGCCGTTGCTTGACACTGTGGACAGGT-TAAGGAACCTCAATGTG 180
||| ||| | || ||||||||||||||||| || ||| || |||||||||||||||||
Sbjct 123 TAACGAT-AGGATTAGGCCGTTGCTTGACACGGTTGAC-CGTCTAAGGAACCTCAATGTG 180
Query 181 ATGAGAGAAGGGATCCATCTTCCCACCATTGTCGTGGTTGGAGACCAGTCGTCGGGAAAG 240
||||||||||| || || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct 181 ATGAGAGAAGGCATTCAGCTTCCCACCATTGTCGTGGTTGGAGACCAGTCCTCGGGGAAG 240
Query 241 TCAAGTGTTCTTGAATCCTTGGCAGGAATCAGTTTGCCTCGTGGGCAAGGAATCTGCACT 300
|||||||| || || || ||||||||||||||| | |||||||| |||||||||||||||
Sbjct 241 TCAAGTGTCCTCGACTCGTTGGCAGGAATCAGTCTACCTCGTGGCCAAGGAATCTGCACT 300
Query 301 AGGGTTCCTCTTGTCATGAGGCTTCAGCGAAGCTCTAGCCCTGAACCTGAGATCTGGCTT 360
|||||||||||||||||| | |||||||||||||||||||||| ||||||||| ||||||
Sbjct 301 AGGGTTCCTCTTGTCATGCGACTTCAGCGAAGCTCTAGCCCTGTACCTGAGATATGGCTT 360
Query 361 GAGTATAGCGACAA-AGTGGTTCCTACGGACGAGGAACACATCGCTGAAGCTAT-TCGTG 418
||||| || ||||| | || |||| ||||| ||||| ||||||||||||||||| | |||
Sbjct 361 GAGTACAGTGACAAGATTG-TTCCCACGGATGAGGAGCACATCGCTGAAGCTATCT-GTG 418
Query 419 CTGCGACAGATGTGATTGCTGG 440
|||| |||||||||||||||||
Sbjct 419 CTGCAACAGATGTGATTGCTGG 440
> AT1G60545.1 | Symbols: | other RNA | chr1:22302492-22305156
FORWARD LENGTH=2305
Length=2305
Score = 1227 bits (664), Expect = 0.0
Identities = 1304/1610 (81%), Gaps = 56/1610 (3%)
Strand=Plus/Minus
Query 429 TGTGATTGCTGGATCTGGTAAAGGGGTCTCAGACGC-TCCCTTGACCCTCCATGTGAAGA 487
|||| |||| |||||||| |||||||| |||||| | ||||| || |||||||||||||
Sbjct 1599 TGTG-TTGCAGGATCTGGCAAAGGGGTTTCAGACACACCCCTT-ACGCTCCATGTGAAGA 1542
Query 488 AGGCTGGTGTTCCAGATCTTACAATGGTCGATCTTCCC-GGTATAACTCGAGTTCCGGTC 546
||||||||||||||||| |||| ||||| ||||| ||| || ||||| || ||||| ||
Sbjct 1541 AGGCTGGTGTTCCAGATATTACTATGGTTGATCT-CCCTGGAATAACCCGTGTTCCTGTG 1483
Query 547 AATGGTCAACCGGAAAATATTTATGAGCAGATCTCTGGGATGATTATGGAGTACATTGAG 606
|| || || || |||||||||||||| ||||| || ||||| ||||| |||| ||||||
Sbjct 1482 AACGGACAGCCTGAAAATATTTATGAACAGATTTCCAGGATGGTTATGAAGTATATTGAG 1423
Query 607 CCTCAAGAATCAATAATCCTCAACGTTCTTTCAGCTACGGTCGACTTCACAACCTGCGAA 666
|| ||||||||||| || ||||| ||||| ||||| || || || ||||| || || |||
Sbjct 1422 CCACAAGAATCAATCATACTCAATGTTCTGTCAGCGACAGTTGATTTCACTACTTGTGAA 1363
Query 667 TCCATTC-GCATGTCTAAAAAAGTGGACAAAACCGGTCAACGTACTCTGGCTGTTGTGAC 725
||||| | | ||||||||| | ||||||||||||||| | || ||||||||||| || ||
Sbjct 1362 TCCAT-CAGAATGTCTAAACAGGTGGACAAAACCGGTGAGCGGACTCTGGCTGTAGTCAC 1304
Query 726 AAAGGCTGACATGGCTCCTGAAGGTCTTTTGCAGAAAGTAACAGCAGATGATGTGAGTAT 785
|||||||||||||||||||||||| ||| | ||||||||||| |||||||||||||||||
Sbjct 1303 AAAGGCTGACATGGCTCCTGAAGGGCTTCTCCAGAAAGTAACTGCAGATGATGTGAGTAT 1244
Query 786 TGTACTTGGTTATGTGTGCGTCAGAAACCGCATTGGAGAAGAGACATATGAAGAAGCTAG 845
| |||||||||||| || || |||||||| || || || || || |||||||||||| |
Sbjct 1243 CGGACTTGGTTATGTCTGTGTTAGAAACCGGATAGGGGAGGAAACCTATGAAGAAGCTCG 1184
Query 846 GATGCATGAAGAATTACTTTTCAAGACTCATCC-ATTGCTAAGCT-TGATTGATGAAGAC 903
||||| ||||| |||||||||| ||| || || || ||| | |||| |||| ||
Sbjct 1183 AATGCAAGAAGAGTTACTTTTCAGGACCCACCCGAT-GCTTT-CAATGATCAATGATGAG 1126
Query 904 ATCGTGGGAAACCCTGTGTTAGCTCAGAAGCTAATGCTTATCCAAGCAA-GCATGAT-TG 961
|| ||||| | ||| || |||||||||||||| | || ||||| | || | ||||| |
Sbjct 1125 ATTGTGGGTATCCCCGTCTTAGCTCAGAAGCTGACGCAGATCCAGGGAATG-ATGATAT- 1068
Query 962 CCAGATGTTTGCCT-AATATTGTACGCAAGATCAACCAGAA-ATTGGACACC-GCTGTTC 1018
| || |||||||| || || | | | ||||| || ||| || ||| | | | ||| |
Sbjct 1067 CTAGGTGTTTGCCGGAA-ATCGAAAGGAAGATAAATGTGAAGAT-GGAAATCAG-TGTCC 1011
Query 1019 TTGAGTTAAACAAGCTACCAATGGTAATGGCTTCTACAGGGGAAGCATTAATGGCGT-TG 1077
| ||||| |||||||| ||||| || ||||||||||| ||||||||||||||| | | |
Sbjct 1010 TGGAGTTTAACAAGCTCCCAATAGTCATGGCTTCTACTGGGGAAGCATTAATGTC-TCTA 952
Query 1078 ATGAATATTATTGGTTCTGCTAAAGAATCTCTATTGAGAATTCTTGTCCAAGGAGACTTC 1137
||| |||| ||||||||||| || || |||||| | ||||| |||||||| ||||| |||
Sbjct 951 ATGGATATCATTGGTTCTGCCAAGGAGTCTCTACTAAGAATCCTTGTCCATGGAGATTTC 892
Query 1138 TCTGAATACCCGGATGATCAAAACATGCATTGTACTGCTCGTTTGGCTGATATGTTAAGT 1197
||||||||||| | |||||||| |||||||| || ||||| |||||||| |||||||
Sbjct 891 TCTGAATACCCTAACGATCAAAAGATGCATTGCACAGCTCGCTTGGCTGAAATGTTAAAC 832
Query 1198 CAATTCTCTGATGATCTGCAAGCAAAGCCA-AAGGATGTGACTGA-G--TTCTTGATGGA 1253
| |||||| || ||||||| ||| |||| ||| ||||| || | |||||||||||
Sbjct 831 CGATTCTCAGACAATCTGCAGGCACAGCCTCAAGCC-GTGACAGAAGAGTTCTTGATGGA 773
Query 1254 TGAGATCAAGATTCTT-GATGAATGCAAATGTGTTGGACTGCCTAATTTCATCCCTAGAT 1312
||| ||||| | |||| || || |||||||| | ||| |||||||||| || || ||||
Sbjct 772 TGAAATCAA-AGTCTTAGAAGAGCGCAAATGTATCGGATTGCCTAATTTTATACCAAGAT 714
Query 1313 CAGCCTTCTTTGCTATTCTTTCACAACATGTTGATGAAATACATGACAAGCCAGTTGAAT 1372
| | ||||| || || |||||||||||||| |||| ||||| |||||||||||||| |
Sbjct 713 CTTCTTTCTTAGCAATCCTTTCACAACATGTGGATGGGATACAAGACAAGCCAGTTGAGT 654
Query 1373 TCATCAACAAGATATGGGACTACATTGAAGTTGTTCTCTCATCAGTCATTTCTA-AGCAT 1431
||||||| |||||||||||||||||||||| ||||| |||||||||||| | | | ||
Sbjct 653 TCATCAAGGAGATATGGGACTACATTGAAGTCGTTCTGTCATCAGTCATTACGACAT-AT 595
Query 1432 TCTGACAA-TTTCCCACAGATTCAATCTTCCATCAAACGAGCCGGTCGCAATCTAAT-AT 1489
|||||||| |||||| ||||||||||| ||||||||| | || ||||| |||||||| |
Sbjct 594 TCTGACAACTTTCCC-CAGATTCAATCCTCCATCAAAAGGGCTGGTCGTAATCTAATGAG 536
Query 1490 CCAAGATCAAAG-AACAATCTGTGAA-TCGAGTGATGGAGATAGTTGAGATGGAGAAGCT 1547
| | || | ||| ||| || ||||| | |||| || ||||| |||||||||||||||||
Sbjct 535 C-AGGA-CTAAGGAACGTTCCGTGAACT-GAGTAATTGAGATCGTTGAGATGGAGAAGCT 479
Query 1548 GACGGATTACACATGTAGCCCTGAGTATATGACGTCTTGGACTCAGAAGACTGG-TGA-A 1605
|| ||||||||||||| ||| || || ||||| ||||||||||||||||| | | |
Sbjct 478 TACCGATTACACATGTAACCCAGATTACATGACTTCTTGGACTCAGAAGACAACCTCACA 419
Query 1606 -CAAGAGAGCTTCATGTATGATGTTTTGAAAAATGGGAACAAACCTGACTACTTCT-CTA 1663
||| | | |||||| || ||| ||| | ||| ||| |||||||| | || | ||
Sbjct 418 GCAA-A-A-CTTCATCAATTCTGTGTTGCACGATGAGAATAAACCTGAGAATTT-TGCTT 363
Query 1664 TGAG-TGGATTTGGGAATGTGAAGATCTCGCATCTACGAAAGTATCACGCTCATTTACTG 1722
| | |||||| ||| ||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 362 T-ACCTGGATTCGGGGATGTGAAGATCTCGCATCTGCGAAAGTATCACGCTCATTTGCTG 304
Query 1723 -ATTCCGGC-TTTCGACATGAAGATAAGAATCACATCCTACTGGAATATCGTCCTACGGA 1780
| | || ||| || |||||||| || |||||||| ||||||| ||||| | || |
Sbjct 303 CAA-CAAGCGTTT-GATATGAAGATGAGGATCACATCTTACTGGACGATCGTATTGCGAA 246
Query 1781 GAATTGTAGATAACCTTGCTCTGTATCTTCAGCTATCTGTGAAGTCTCTCGTAAACTGTC 1840
| |||| |||||||||||||| || ||||| | ||||||||| ||| || ||| |||
Sbjct 245 GGGTTGTCGATAACCTTGCTCTCTACCTTCAATTCTCTGTGAAGAATCTGGTCAACAGTC 186
Query 1841 AATTTCAGAAGGAGATTGTGGCGGAGATGGTGGATCCAAGAGATGGCGGAGGAGTTGAAA 1900
| |||||||||||||||||||||||||||||||||||||||| |||||||||| | || |
Sbjct 185 AGTTTCAGAAGGAGATTGTGGCGGAGATGGTGGATCCAAGAGCTGGCGGAGGAATAGATA 126
Query 1901 AGATGTTGGAGGAATCTCCGTCGGTGGCGAGTAAGAGGGAGAAGCTGAAGAATAGTATCA 1960
|||| |||||||||| |||||||||||||| |||||||||||||||||||||||| |||
Sbjct 125 GGATGCTGGAGGAATCACCGTCGGTGGCGAGCAAGAGGGAGAAGCTGAAGAATAGTCTCA 66
Query 1961 AGCT-CTTGAAGGAGTCCAAGGATGCTGTGGCCGCCATTGTTGATCAGAA 2009
|||| || |||||| |||||||| | |||||| |||||||||||||||||
Sbjct 65 AGCTTCT-GAAGGAATCCAAGGACGTTGTGGCGGCCATTGTTGATCAGAA 17
Score = 385 bits (208), Expect = 1e-105
Identities = 312/363 (86%), Gaps = 4/363 (1%)
Strand=Plus/Minus
Query 80 ACAAAGATGTTGTTCCTGTTGAAGCACCGATTGTATCTTCGTATAATGATCAAATCAGGC 139
|||||||||||||||| |||||||| |||||||| || || ||||| || |||||||
Sbjct 2058 ACAAAGATGTTGTTCCCACAGAAGCACCAATTGTATCATCTTACAATGACCACATCAGGC 1999
Query 140 CGTTGCTTGACACTGTGGACAGGTTAAGGAACCTCAATGTGATG-AGAGAAGGGATCCAT 198
||||||||||||||||||||| | | |||||| | ||||||||| | ||||||||| ||
Sbjct 1998 CGTTGCTTGACACTGTGGACAAGCTCAGGAACTTGAATGTGATGCA-AGAAGGGATTCAG 1940
Query 199 CTTCCCACCATTGTCGTGGTTGGAGACCAGTCGTCGGGAAAGTCAAGTGTTCTTGAATCC 258
||||| |||||||| ||||||||||||||||| ||||| ||||| ||||| || || ||
Sbjct 1939 CTTCCTACCATTGTTGTGGTTGGAGACCAGTCCTCGGGGAAGTCGAGTGTCCTCGAGTCG 1880
Query 259 TTGGCAGGAATCAGTTTGCCTCGTGGGCAAGGAATCTGCACTAGGGTTCCTCTTGTCATG 318
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 1879 TTGGCAGGAATCAGTTTGCCACGTGGGCAAGGAATCTGCACTAGAGTTCCTCTTGTCATG 1820
Query 319 AGGCTTCAGCGAAGCTCTA-GCCCTGAACCTGAGATCTGGCTTGAGTATAGCGACAAAGT 377
||||| ||| |||| || | |||||||||||||||||||||| ||||| | |||||| |
Sbjct 1819 AGGCTCCAGAGAAG-TCGAAGCCCTGAACCTGAGATCTGGCTGGAGTACGGTGACAAAAT 1761
Query 378 GGTTCCTACGGACGAGGAACACATCGCTGAAGCTATTCGTGCTGCGACAGATGTGATTGC 437
|||||||| || ||||||||||| ||| || ||||| |||| || ||||| ||||| ||
Sbjct 1760 TGTTCCTACAGATGAGGAACACATTGCTCAAACTATTTGTGCAGCTACAGACGTGATAGC 1701
Query 438 TGG 440
|||
Sbjct 1700 TGG 1698
> AT1G60505.1 | Symbols: | other RNA | chr1:22294677-22297220
REVERSE LENGTH=1928
Length=1928
Score = 1138 bits (616), Expect = 0.0
Identities = 972/1143 (85%), Gaps = 27/1143 (2%)
Strand=Plus/Minus
Query 881 TGCTAAGCTTGATTGATGAAGACATCGTGGGAAACCCTGTGT-TAGCTCAGAAGCTAATG 939
|||| |||||||||||||||||||||||||||| |||||| | |||||||||||||||||
Sbjct 1160 TGCTGAGCTTGATTGATGAAGACATCGTGGGAATCCCTGT-TATAGCTCAGAAGCTAATG 1102
Query 940 CTTATCCAAGCAAGC-ATGATTGCCAGATGTTTGCCT-AATATTGTACGCAAGATCAACC 997
||||||||||||| | |||||| || | ||||||||| || || || ||||||||||| |
Sbjct 1101 CTTATCCAAGCAA-CGATGATTTCCCGCTGTTTGCCTGAA-ATCGTTCGCAAGATCAATC 1044
Query 998 AGAA-ATTGGACACCGCTGTTCTTGAGTTAAACAAGCTACCAATGGTAATGGCTTCTACA 1056
| || | |||| || ||||| || ||||| ||||||||||| ||||| |||||||||||
Sbjct 1043 ACAAGA-TGGAAACTGCTGTCCTGGAGTTGAACAAGCTACCGATGGTTATGGCTTCTACC 985
Query 1057 GGGGAAGCATTAATGGCGTTGATGAATATTATTGGTTCTGCTAAAGAATCTCTATTGAGA 1116
|| |||||||| ||||| |||||| | || ||||||||||| || || || || || |||
Sbjct 984 GGAGAAGCATTGATGGCATTGATGGACATCATTGGTTCTGCCAAGGAGTCCCTCTTCAGA 925
Query 1117 ATTCTTGTCCAAGGAGACTTCTCTGAATACCCGGATGATCAAAACATGCATTGTACTGCT 1176
|| ||||||||||||||||||||||||| ||||||||| || |||||||| |||||||||
Sbjct 924 ATCCTTGTCCAAGGAGACTTCTCTGAATTCCCGGATGACCAGAACATGCACTGTACTGCT 865
Query 1177 CGTTTGGCTGATATGTTAAGTCAATTCTCTGATGATCTGCAAGCA-AAGCCAAAGGATGT 1235
||||||||||| |||||||| |||||||| ||| ||||||||| | ||||||||||| ||
Sbjct 864 CGTTTGGCTGACATGTTAAGCCAATTCTCCGATAATCTGCAAG-AGAAGCCAAAGGAAGT 806
Query 1236 GACTGAGTTCTTGATGGATGAGATCAAGATTCTTGATGAATGCAAATGTGTTGGACTGCC 1295
||| |||||||||||| ||||||||||||| ||||| |||||||| ||||||||||||||
Sbjct 805 GACCGAGTTCTTGATGAATGAGATCAAGATCCTTGACGAATGCAAGTGTGTTGGACTGCC 746
Query 1296 TAATTTCATCCCTAGATCAGCCTTCTTTGCTATTCTTTCACAACATGTTGATGAAATACA 1355
||||||||||| || ||||||||||| ||||| || |||||||| | |||| |||||
Sbjct 745 CAATTTCATCCCCAGGTCAGCCTTCTTGGCTATACTATCACAACACGAAGATGCCATACA 686
Query 1356 TGACAAGCCAGTTGAATTCATCAACAAGATATGGGACTACATTGAAGTTGTTCTCTCATC 1415
|| |||||| || || |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 685 TGTCAAGCCCGTGGAGTTCATCAAGAAGATATGGGACTACATTGAAGTTGTTCTCTCATC 626
Query 1416 AGTCATTTCTAAGCATTCTGACAATTTCCCACAGATTCAATCTTCCATCAAACGAGCCGG 1475
|||||| | ||| ||||||| || ||||||||||| |||||| |||||||||| || ||
Sbjct 625 CGTCATTGCCAAGTATTCTGAAAACTTCCCACAGATCCAATCTGCCATCAAACGTGCTGG 566
Query 1476 TCGCAATCTAAT-ATCCAAGATCAAAGAACAATCTGTGAATCGAGTGATGGAGATAGTTG 1534
||| |||||||| | |||||||||| ||||| |||||| | |||||| ||||||| ||||
Sbjct 565 TCGAAATCTAATCA-CCAAGATCAAGGAACACTCTGTGGAGCGAGTGTTGGAGATTGTTG 507
Query 1535 AGATGGAGAAGCTGACGGATTACACATGTAGCCCTGAGTATATGACGTCTTGGACTCAGA 1594
| |||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||
Sbjct 506 AAATGGAGAAGCTGACTGATTACACATGTAACCCTGAGTACATGACGTCTTGGACTCAGA 447
Query 1595 AGACTGGTGAACAAGAGAGCTTCATGTATGATGTTTTGAAAAATGGGAACAAA-CCTGA- 1652
||||| ||||||| | | |||||| |||| ||| ||| ||||||| ||| |||||
Sbjct 446 TGACTGCTGAACAACAAAACTTCATTTATGCTGTGTTGTCCGATGGGAA-AAAGCCTGAG 388
Query 1653 CTACTTCTC-TATGAGTGGATTT-G-GGAA-TGTGAAGATCTCGCATCTACGAAAGTATC 1708
| ||||||| | ||| ||||||| | |||| |||||||||||| || ||||| |||||||
Sbjct 387 C-ACTTCTCGT-TGACTGGATTTGGTGGAATTGTGAAGATCTCTCACCTACGGAAGTATC 330
Query 1709 ACGCTCATTTACTG-ATTCCGGCTTTCGACATGAAGATAAGAATCA-CATCCTACTGGAA 1766
| |||||| | ||| | | || ||||| |||||||| || || | |||| |||||||
Sbjct 329 ATGCTCATCTCCTGCA-GCAAGCCTTCGATATGAAGATGAGGAT-AGCATCTTACTGGAC 272
Query 1767 TATCGTCCTACGGAGAATTGTAGATAACCTTGCTCTGTATCTTCAGCTATCTGTGAAGTC 1826
|| ||| |||| || ||||| || | |||||||||||||||||||| || ||||||
Sbjct 271 GATAGTCTTACGAAGGATTGTGGACAGTCTTGCTCTGTATCTTCAGCTGTCAGTGAAGAA 212
Query 1827 TCTCGTAAACTGTCAATTTCAGAAGGAGATTGTGGCGGAGATGGTGGATCCAAGAGATGG 1886
|||||| || | | | |||||||||||||||||||||||||||||||||||||||| |||
Sbjct 211 TCTCGTGAATTATTAGTTTCAGAAGGAGATTGTGGCGGAGATGGTGGATCCAAGAGCTGG 152
Query 1887 CGGAGGAGTTGAAAAGATGTTGGAGGAATCTCCGTCGGTGGCGAGTAAGAGGGAGAAGCT 1946
|||||| || | | |||| | ||||| || |||||||||||||| ||||| ||||||||
Sbjct 151 CGGAGGTCTTCAGAGGATGCTAGAGGAGTCGCCGTCGGTGGCGAGCAAGAGAGAGAAGCT 92
Query 1947 GAAGAATAGTATCAAGCT-CTTGAAGGAGTCCAAGGATGCTGTGGCCGCCATTGTTGATC 2005
|||||| ||||||||||| | |||||||||||||||||| ||||| |||||||| ||||
Sbjct 91 GAAGAACAGTATCAAGCTTCC-GAAGGAGTCCAAGGATGCAGTGGCGGCCATTGTCGATC 33
Query 2006 AGA 2008
|||
Sbjct 32 AGA 30
Score = 671 bits (363), Expect = 0.0
Identities = 579/680 (85%), Gaps = 27/680 (4%)
Strand=Plus/Minus
Query 8 GTAGTAAGAAGAAAGTTGTGACTaaaaaaaCCTCTCCTCC-TCTC-T-CAATTG-CCATA 63
||||||||||| | ||||| ||| | ||||||| |||| |||| | |||||| |||
Sbjct 1876 GTAGTAAGAAGCATGTTGTCACT---AGAACCTCTTCTCCTTCTCTTGCAATTGTCCA-G 1821
Query 64 AAGAAGTCC-CGTGGCAACAAAGATGTTGTTCCTGTTGAAGCACCGATTGTATCTTCGTA 122
||| ||| | || ||||| ||| |||||||| | |||||||||||| ||||||| ||
Sbjct 1820 GCGAA-TCCTCATGACAACAGAGAAGTTGTTCCCATCGAAGCACCGATTATATCTTCATA 1762
Query 123 TAATGATCA-AATCAGGCCGTTGCTTGACACTGTGGACAGGT-TAAGGAACCTCAATGTG 180
||| ||| | || ||||||||||||||||| || ||| || |||||||||||||||||
Sbjct 1761 TAACGAT-AGGATTAGGCCGTTGCTTGACACGGTTGAC-CGTCTAAGGAACCTCAATGTG 1704
Query 181 ATGAGAGAAGGGATCCATCTTCCCACCATTGTCGTGGTTGGAGACCAGTCGTCGGGAAAG 240
||||||||||| || || |||||||||||||||||||||||||||||||| ||||| |||
Sbjct 1703 ATGAGAGAAGGCATTCAGCTTCCCACCATTGTCGTGGTTGGAGACCAGTCCTCGGGGAAG 1644
Query 241 TCAAGTGTTCTTGAATCCTTGGCAGGAATCAGTTTGCCTCGTGGGCAAGGAATCTGCACT 300
|||||||| || || || ||||||||||||||| | |||||||| |||||||||||||||
Sbjct 1643 TCAAGTGTCCTCGACTCGTTGGCAGGAATCAGTCTACCTCGTGGCCAAGGAATCTGCACT 1584
Query 301 AGGGTTCCTCTTGTCATGAGGCTTCAGCGAAGCTCTAGCCCTGAACCTGAGATCTGGCTT 360
|||||||||||||||||| | |||||||||||||||||||||| ||||||||| ||||||
Sbjct 1583 AGGGTTCCTCTTGTCATGCGACTTCAGCGAAGCTCTAGCCCTGTACCTGAGATATGGCTT 1524
Query 361 GAGTATAGCGACAA-AGTGGTTCCTACGGACGAGGAACACATCGCTGAAGCTATTCGTGC 419
||||| || ||||| | || |||| ||||| ||||| ||||||||||||||||| | ||
Sbjct 1523 GAGTACAGTGACAAGATTG-TTCCCACGGATGAGGAGCACATCGCTGAAGCTAT-C-TG- 1468
Query 420 TGCGACAGATGTGATTGCTGGATCTGGTAAAGGGGTCTCAGACGCTCCCTTGACCCTCCA 479
||| | | | ||| |||||||| |||||||||||||||||||| |||||||||||
Sbjct 1467 TGCTA----T---ACTGCAGGATCTGGCAAAGGGGTCTCAGACGCTCCATTGACCCTCCA 1415
Query 480 TGTGAAGAAGGCTGGTGTTCCAGATCTTACAATGGTCGATCTTCCCGGTATAACTCGAGT 539
||| ||||||||||| || ||| ||||||| ||||||||||||||||||||||||||||
Sbjct 1414 TGTTAAGAAGGCTGGGGTCCCATATCTTACCATGGTCGATCTTCCCGGTATAACTCGAGG 1355
Query 540 TCCGGTCAATGGTCAACCGGAAAATATTTATGAGCAGATCTCTGGGATGATTATGGAGTA 599
|| || ||||| |||||||| |||||||| || ||||| ||||||||||| ||| ||||
Sbjct 1354 -CCAGTGAATGGACAACCGGAGAATATTTACGAACAGATTTCTGGGATGATCATGAAGTA 1296
Query 600 CATTGAGCCTCAAGAATCAATAATCCTCAACGTTCTTTCAGCTACGGTCGACTTCACAAC 659
||| ||||| |||||||||||||||||||| ||||| |||||||| ||||||||||| ||
Sbjct 1295 CATCGAGCCACAAGAATCAATAATCCTCAATGTTCTGTCAGCTACAGTCGACTTCACCAC 1236
Query 660 CTGCGAATCCATTCGCATGT 679
||| |||||||| || ||||
Sbjct 1235 CTGTGAATCCATCCGTATGT 1216
> AT1G60530.1 | Symbols: DRP4A | Dynamin related protein 4A | chr1:22299797-22301167
FORWARD LENGTH=906
Length=906
Score = 939 bits (508), Expect = 0.0
Identities = 712/812 (88%), Gaps = 8/812 (1%)
Strand=Plus/Plus
Query 98 TTGAAGCACCGATTGTATCTTCGTATAATGATCAAATCAGGCCGTTGCTTGACACTGTGG 157
|||||||||| |||||||| || || ||||| | ||| |||| |||||||||||||| |
Sbjct 83 TTGAAGCACCAATTGTATCATCTTACAATGACCGGATCCGGCCATTGCTTGACACTGTCG 142
Query 158 ACAGGTTAAGGAACCTCAATGTGATGAGAGAAGGGATCCATCTTCCCACCATTGTCGTGG 217
|||| || || ||||| ||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 143 ACAGATTGAGAAACCTGAATGTGATGAGAGAAGGGATCCAGCTTCCCACCATTGTGGTGG 202
Query 218 TTGGAGACCAGTCGTC-GGGAAAGTCAAGTGTTCTTGAATCCTTGGCAGGAATCAGTTTG 276
||||||||||||| || ||| ||||| ||||||||||| || ||||||||||||| ||||
Sbjct 203 TTGGAGACCAGTCTTCAGGG-AAGTCGAGTGTTCTTGAGTCGTTGGCAGGAATCAATTTG 261
Query 277 CCTCGTGGGCAAGGAATCTGCACTAGGGTTCCTCTTGTCATGAGGCTTCAGCGAAGCTCT 336
|||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 262 CCTCGTGGACAAGGAATCTGCACTAGGGTTCCTCTAGTCATGAGGCTTCAGCGAAGCTCC 321
Query 337 AGCCCTGAACCTGAGATCTGGCTTGAGTATAGCGACAAAGTGGTTCCTACGGACGAGGAA 396
||||||||||| ||||| ||||| || || || |||||||| ||||| || || || |||
Sbjct 322 AGCCCTGAACCAGAGATTTGGCTGGAATACAGTGACAAAGTTGTTCCCACAGATGAAGAA 381
Query 397 CACATCGCTGAAGCTATTCGTGCTGCGACAGATGTGATTGCTGGATCTGGTAAAGGGGTC 456
||| |||||||||||||| ||||||| |||||||||||||||||| ||||| |||| ||
Sbjct 382 CACGTCGCTGAAGCTATTTGTGCTGCAACAGATGTGATTGCTGGAACTGGTGAAGGAGTT 441
Query 457 TCAGACGCTCCCTTGACCCTCCA-TGTGAAGAAG-GCTGGTGTTCCAGATCTTACAATGG 514
|||||| ||||| ||||||| || ||| |||||| | ||| ||||||||||| ||||
Sbjct 442 TCAGACACTCCCCTGACCCT-CAGTGTTAAGAAGAAC-AATGTCCCAGATCTTACGATGG 499
Query 515 TCGATCTTCCCGGTATAACTCGAGTTCCGGTCAATGGTCAACCGGAAAATATTTATGAGC 574
|||||||||||||||||||||||||||| || ||||| |||||||| |||||||| || |
Sbjct 500 TCGATCTTCCCGGTATAACTCGAGTTCCAGTGAATGGACAACCGGAGAATATTTACGAAC 559
Query 575 AGATCTCTGGGATGATTATGGAGTACATTGAGCCTCAAGAATCAATAATCCTCAACGTTC 634
|||| ||| ||||||| ||| ||||||| |||||||||||||||||||||||||| ||||
Sbjct 560 AGATTTCTAGGATGATCATGAAGTACATCGAGCCTCAAGAATCAATAATCCTCAATGTTC 619
Query 635 TTTCAGCTACGGTCGACTTCACAACCTGCGAATCCATTCGCATGTCTAA-AAAAGTGGAC 693
| |||||||||||||||||||| || |||||||||||||||||||| || | |||| |||
Sbjct 620 TGTCAGCTACGGTCGACTTCACCACATGCGAATCCATTCGCATGTC-AAGACAAGTTGAC 678
Query 694 AAAACCGGTCAACGTACTCTGGCTGTTGTGACAAAGGCTGACATGGCTCCTGAAGGTCTT 753
||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 679 AAAACTGGTGAACGGACTCTGGCTGTTGTGACAAAGGCTGACATGGCTCCTGAAGGTCTC 738
Query 754 TTGCAGAAAGTAACAGCAGATGATGTGAGTATTGTACTTGGTTATGTGTGCGTCAGAAAC 813
||||||||||||| ||||||||||||||||| | ||| ||||| | || || ||||||
Sbjct 739 CTGCAGAAAGTAACTGCAGATGATGTGAGTATCGGACTAGGTTACATCTGTGTTAGAAAC 798
Query 814 CGCATTGGAGAAGAGACATATGAAGAAGCTAGGATGCATGAAGAATTACTTTTCAAGACT 873
|| || ||||||||||||||||||||||||||| |||| ||||| ||||| |||| ||||
Sbjct 799 CGTATAGGAGAAGAGACATATGAAGAAGCTAGGGTGCAGGAAGATTTACTCTTCAGGACT 858
Query 874 CATCCATTGCTAAGCTTGATTGATGAAGACAT 905
|||||| ||||||| |||||||||| |||||
Sbjct 859 CATCCACTGCTAAGTTTGATTGATGGTGACAT 890
> AT1G60525.1 | Symbols: | other RNA | chr1:22299541-22301305
REVERSE LENGTH=1669
Length=1669
Score = 387 bits (209), Expect = 3e-106
Identities = 294/335 (88%), Gaps = 6/335 (2%)
Strand=Plus/Minus
Query 435 TGCTGGATCTGGTAAAGGGGTCTCAGACGCTCCCTTGACCCTCCA-TGTGAAGAAG-GCT 492
||| ||| ||||| |||| || |||||| ||||| ||||||| || ||| |||||| |
Sbjct 529 TGCAGGAACTGGTGAAGGAGTTTCAGACACTCCCCTGACCCT-CAGTGTTAAGAAGAAC- 472
Query 493 GGTGTTCCAGATCTTACAATGGTCGATCTTCCCGGTATAACTCGAGTTCCGGTCAATGGT 552
||| ||||||||||| |||||||||||||||||||||||||||||||| || |||||
Sbjct 471 AATGTCCCAGATCTTACGATGGTCGATCTTCCCGGTATAACTCGAGTTCCAGTGAATGGA 412
Query 553 CAACCGGAAAATATTTATGAGCAGATCTCTGGGATGATTATGGAGTACATTGAGCCTCAA 612
|||||||| |||||||| || ||||| ||| ||||||| ||| ||||||| |||||||||
Sbjct 411 CAACCGGAGAATATTTACGAACAGATTTCTAGGATGATCATGAAGTACATCGAGCCTCAA 352
Query 613 GAATCAATAATCCTCAACGTTCTTTCAGCTACGGTCGACTTCACAACCTGCGAATCCATT 672
||||||||||||||||| ||||| |||||||||||||||||||| || ||||||||||||
Sbjct 351 GAATCAATAATCCTCAATGTTCTGTCAGCTACGGTCGACTTCACCACATGCGAATCCATT 292
Query 673 CGCATGTCTAA-AAAAGTGGACAAAACCGGTCAACGTACTCTGGCTGTTGTGACAAAGGC 731
|||||||| || | |||| |||||||| ||| |||| |||||||||||||||||||||||
Sbjct 291 CGCATGTC-AAGACAAGTTGACAAAACTGGTGAACGGACTCTGGCTGTTGTGACAAAGGC 233
Query 732 TGACATGGCTCCTGAAGGTCTTTTGCAGAAAGTAA 766
||||||||||||||||||||| ||||||||||||
Sbjct 232 TGACATGGCTCCTGAAGGTCTCCTGCAGAAAGTAA 198
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 105220342320
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5