BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg475285 Length=1636 Score E Sequences producing significant alignments: (Bits) Value AT1G60460.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 2134 0.0 > AT1G60460.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 23 Blast hits to 23 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:22275484-22279007 FORWARD LENGTH=1719 Length=1719 Score = 2134 bits (1155), Expect = 0.0 Identities = 1322/1403 (94%), Gaps = 10/1403 (1%) Strand=Plus/Plus Query 1 CTGCCATGGAAACCACCGCTCCGGTTCCAAAGCTTCTTCTACAATTAATATCATCTGCTT 60 |||||||||||| || ||||||||||| |||||||||||||||||||| |||||||||| Sbjct 112 CTGCCATGGAAAACAATGCTCCGGTTCCGAAGCTTCTTCTACAATTAATCTCATCTGCTT 171 Query 61 TTCAAAGATGCCGTTTATCAGAAGATCTCTGTAGATTATCAGTTCTTCTTGACCAATCTA 120 | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 172 TCCAAAGATGCCGTTTAGCAGAAGATCTCTGTAGATTATCAGTTCTTCTTGACCAATCCA 231 Query 121 -C-AAACAATGATCCTCCGATTTCGTGTATTTCGATTGCGGATACGGGAATTGGATGCAA 178 | ||| | |||||||||||| | |||||||||||||| |||||||||||||||||||| Sbjct 232 CCGAAA-GA-GATCCTCCGATTACTTGTATTTCGATTGCCGATACGGGAATTGGATGCAA 289 Query 179 TTTGGAGGAATTTCAGATTTTGAGGTGCCCTAGAGAATTCAATGGAGCCAAGATTTGGGA 238 ||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||| Sbjct 290 TTTGGAGGAATTTCAGAATTTGAGGTGCCCAAGAGAATTCAATGGAGCGAAGATTTGGGA 349 Query 239 TGGGTTACTCTCCGTCAAAACGACTTGCTTTACTGACGATGAGGTATACTATTATCATAT 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 350 TGGGTTACTCTCCGTCAAAACGACTTGCTTTACTGACGATGAGGTATACTATTATCATAT 409 Query 299 AAATCTTGATGAGTATATTGCAAACAAACGACTGAAAAGACAACCTTCTCAGGCTAAGAA 358 |||||| ||||||||||| || |||||| ||||||||||||||||||||||||||||||| Sbjct 410 AAATCTGGATGAGTATATAGCGAACAAAAGACTGAAAAGACAACCTTCTCAGGCTAAGAA 469 Query 359 TGGTGCAAAGTTTAGTGGGACGGAAGTATCCCTGACTGTTTTTGGAAGTATGGATGTTCT 418 ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct 470 TGGTGCAAAGTTTAGTGGGACTGAAGTATCCCTGAGTGTTTTTGGAAGTATGGATGTTCT 529 Query 419 CGTGGCACCGATAATTGGCTTCTTTCAAAAGGTC-TTCCCTTCT-GTTCTGCATAATGTC 476 ||||||||||||||||||||||||||||||| || || |||| | | ||||||| Sbjct 530 CGTGGCACCGATAATTGGCTTCTTTCAAAAGATCATT--GTTCTACAGATACTTAATGTC 587 Query 477 ACAATGGATCTGATGGTTAAACAAGGGGA-TTCTCCTGGTAATCAAACTCAATATGTCTT 535 ||| |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||| Sbjct 588 ACATTGGATCTGATGGTTAAACAA-GGGACTTCTCCTGGTAATCAAACTCAATACGTCTT 646 Query 536 TGCAGTGAACGCTGACAAAACTCCATGCTTTACTGCCTCCAATCTTGAACGGTTGAAGTC 595 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 647 TGCAGTGAACGCTGACAAAACTCCATGCTTTACTGCCTCCAATCTTGAACGGTTGAAGTC 706 Query 596 TGGTCTTGAGGACTATGTTTTAAGGCATGGAAACTGTTTGGATACGATGTGTGACTATTG 655 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 707 TGGTCTTGAGGACTATGTTTTAAGGCATGCTAACTGTTTGGATACGATGTGTGACTATTG 766 Query 656 CTTTTCGGATAGAGAGCATCTGAAAGCTGGAAGTGGAACACTATGCCAGGAAGACAAACA 715 ||| || |||||||||||||| |||| ||||||||||||| ||||||||||||||||||| Sbjct 767 CTTCTCTGATAGAGAGCATCTAAAAGTTGGAAGTGGAACAGTATGCCAGGAAGACAAACA 826 Query 716 TAAGAGAGTTGGAGGGACGATGGAAGTGGTGATTGTGATAAGTGACTTGCTAGAGACAAC 775 |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct 827 TAAGAGAGTTGGAGGGACGATGGAAGTGGTTATTGTGATAAGTGACTTGCTAGAGTCAAC 886 Query 776 TCAGCATTGCAGCAGATCCTGCGATGGAAAAACAGAGGTTTTATACTTTGACAATTTCTC 835 |||||||||||||||||| ||| | || |||||||||||| |||||||||||||||||| Sbjct 887 TCAGCATTGCAGCAGATCATGCAACGGCAAAACAGAGGTTCTATACTTTGACAATTTCTT 946 Query 836 ACCTTCCCCTGTTCCACATTTGGCCTTGAGCGCATTGAAAAAGATTGACTGGAAAAATTA 895 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct 947 ACCTTCCCCTGTTCCACATTTGGCATTGAGCGCATTGAAAAAGATTGACTGGAAAAAATA 1006 Query 896 TGGTTTGATCCTGGCGAATGTGAATGATCAAGATGGACATGTGTTTCTCGAGTGGGAAAA 955 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct 1007 TGGTTTGATCCTGGCGAATGTGAATGATCAAGACGGACATGTGTTTCTCGAGTGGGACAA 1066 Query 956 TTTCCCTTCTTATGTTCAAATACAAATTTCCCTCCATTGGTATCACAATCAATATCCAGC 1015 ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct 1067 TTTCCCTTCATATGTTCAAATACAAATCGCCCTCCATTGGTATCACAATCAATATCCAAC 1126 Query 1016 AAGACAGAAGAATGGGCCTGGTATAAGTTTTTTGAAGAAAGGAATGAAAAATGCTTTGGA 1075 ||| |||||||||||||||||||||||| || ||||||| ||||| |||||||||||||| Sbjct 1127 AAGGCAGAAGAATGGGCCTGGTATAAGTCTTCTGAAGAAGGGAATAAAAAATGCTTTGGA 1186 Query 1076 TAATTTGAAGGCTAAACATGAGGGTTTTCTTCTAAGCTCACATGCTCGTAAGATTTGCAG 1135 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1187 CAATTTGAAGGCTAAACATGAGGGTTTTCTTCTAAGCTCACATTCTCGTAAGATTTGCAG 1246 Query 1136 CTATGTCCCTGACCTTGCAAGATCAATAGCAGGCCTAATATTCTCCTCTACTGATTTGGA 1195 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct 1247 CTATGTCCCTGACCTTGCAAGATCAATAGCAGGCCTAATATTCTCCTCTACTGACTTAGA 1306 Query 1196 CTTCCAAGGAGATTGCCTATCTGTTCTTGGATTTCAGACTCAAAAAGTTGAACGTGACAC 1255 ||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||| Sbjct 1307 CTTCCAAGGAGATTGCCTATCTGTTCTTGGATTTCAGACACAAGAAGTTGAGCGTGACAC 1366 Query 1256 AGTCGAGGACTATATCCAGAGAAAGATCGTGACCGTTATAGGAATGAATGAGAGGAAACC 1315 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1367 AGTCGAGAACTATATCCAGAGAAAGATCGTGACGGTTATAGGAATGAATGAGAGGAAACC 1426 Query 1316 TCAGAAAGACCAAGAAGCTGCTCCTTTTCTGTTTTTTGATGGCGAGTCTGAGACATCATT 1375 ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct 1427 CCAGAAAGACCAAGAAGCTGCTCCTTTTCTGTTTTTTGATGGCGAGTCTGAGACGTCGTT 1486 Query 1376 CTTTGAAGATGAGGAAGTAGAAG 1398 ||||||||||||||||||||||| Sbjct 1487 CTTTGAAGATGAGGAAGTAGAAG 1509 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 80822877450 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5