BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg475288 Length=1287 Score E Sequences producing significant alignments: (Bits) Value AT1G60440.1 | Symbols: ATCOAA, ATPANK1, PANK1 | pantothenate ki... 1934 0.0 > AT1G60440.1 | Symbols: ATCOAA, ATPANK1, PANK1 | pantothenate kinase 1 | chr1:22266497-22269243 REVERSE LENGTH=1481 Length=1481 Score = 1934 bits (1047), Expect = 0.0 Identities = 1214/1292 (94%), Gaps = 21/1292 (2%) Strand=Plus/Plus Query 1 ATGGATTCGACTCAAAAAATCTCTCATTTGGCTCTCGACATCGGAGGGACTTTGATAAAG 60 |||||| |||||| ||||||||||||||||||||||||||||||||||| |||| ||| Sbjct 174 ATGGATCCGACTC---AAATCTCTCATTTGGCTCTCGACATCGGAGGGACTCTGATCAAG 230 Query 61 CTTGTGTATTTCTCGGCAAATGGAGATTATAGCGAAGAGTCTCGTAATGGTTGCTCTGTT 120 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 231 CTTGTGTATTTCTCTGCAAATGGAGATTATAGCGAAGAGTCTCGTAATGGTTGCTCTGTT 290 Query 121 GTTCATGGGAA-GCTTTGTTTCGCCAAGTTTGAGACCAGAAAGATTGATGATTGTTTGGA 179 | | | |||| |||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 291 G-TGAAAGGAAGGCTTTGTTTCGCTAAGTTTGAGACTAGAAAGATTGATGATTGTTTGGA 349 Query 180 GTTTATTCGATTCAATATTCTTCATCATTCCGGTGTTCAGCATCCGAATGGCG-TGGCTC 238 |||||||||||||||||| ||||||||||||||||| ||||| |||||||||| || || Sbjct 350 GTTTATTCGATTCAATATCCTTCATCATTCCGGTGTACAGCAACCGAATGGCGAAGG-TC 408 Query 239 TTGATAAACTTTATGTTAAGGCCACAGGTGGTGGGGCATTTAAGTTTGCTGATCTCTTTA 298 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 409 ATGATAAACTTTATGTTAAGGCCACAGGTGGTGGGGCATTTAAGTTTGCTGATCTCTTTA 468 Query 299 AGGAGAAACTTGGAATTCTTTTTGATAAGGAAGATGAGATGCATTCTCTTGTTGGGGGTG 358 ||||||||||||| |||||||| |||||||||||||||||| |||||||||||| |||| Sbjct 469 AGGAGAAACTTGGTATTCTTTTCGATAAGGAAGATGAGATGTGTTCTCTTGTTGGTGGTG 528 Query 359 TTAATTTTCTATTAAAGACAGTCCCAAGGGAAGCTTTTACCTACTTGGATGGCCAGAAGG 418 ||||||||||| ||||||| |||||||||||||||||||||||||| |||||||| ||| Sbjct 529 TTAATTTTCTACTAAAGACTGTCCCAAGGGAAGCTTTTACCTACTTAGATGGCCAAAAGA 588 Query 419 AGTTTGTCGAGATCGACCATAATGATTTGTACCCATATCTACTTGTTAATATAGGCTCTG 478 ||||||||||||||||||||||||||||||| ||||||||||| || || || || |||| Sbjct 589 AGTTTGTCGAGATCGACCATAATGATTTGTATCCATATCTACTAGTCAACATCGGTTCTG 648 Query 479 GCGTTAGCATGATCAAGGTCGATGGAGATGGAAAGTATGAGCGGATAAGTGGAACAAGCC 538 |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct 649 GCGTTAGCATGATCAAGGTCGATGGAGATGGAAAATATGAGAGGATAAGTGGAACAAGCC 708 Query 539 TTGGTGGAGGCACATTTTTAGGTCTTGGAAAGCTTTTAACAAAATGCAAGAGTTTTGATG 598 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 709 TTGGCGGAGGCACATTTTTAGGTCTTGGGAAGCTTTTAACAAAATGCAAGAGTTTTGATG 768 Query 599 AGCTGCTAGAGTTAAGTCACCATGGAAATAACAGAGTAATTGACATGCTTGTGGGGGATA 658 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 769 AGCTGCTAGAGTTAAGCCACCATGGAAATAACAGAGTAATTGACATGCTTGTGGGGGATA 828 Query 659 TCTATGGTGGAACAGATTATTCAAAGATTGGTCTCTCCTCAACAGCTATCGCTTCCAGCT 718 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 829 TCTACGGTGGAACAGATTATTCAAAGATTGGTCTCTCCTCAACAGCTATCGCTTCCAGCT 888 Query 719 TTGGGAAAGCGATTTCTGATGGCAAAGAACTTGAAGATTACCAGCCAGAAGATGTTGCAA 778 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct 889 TTGGGAAAGCGATTTCTGATGGTAAAGAACTTGAAGATTACCAGCCAGAAGATGTGGCAA 948 Query 779 GGTCCCTTCTACGAATGATATCAAATAACATCGGTCAGATTGCTTATTTGAATGCTCTCA 838 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 949 GGTCCCTTCTAAGAATGATATCAAATAACATCGGTCAGATTGCTTATTTGAATGCTCTCA 1008 Query 839 GATTCGGTCTTAAGCGTATTTTCTTTGGTGGATTTTTCATCCGTGGGCTTGAGTACACCA 898 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1009 GATTCGGTCTTAAGCGTATTTTCTTTGGTGGATTTTTCATCCGTGGGCTTGAGTACACCA 1068 Query 899 TGGACACAATCTCTGTTGCTGTTCACTTTTGGTCGAGAGGTGAGGCGAAGGCAATGTTTT 958 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1069 TGGACACAATCTCCGTTGCTGTTCACTTTTGGTCGAGAGGTGAGGCAAAGGCAATGTTTT 1128 Query 959 TACGACATGAAGGGTTTCTTGGAGCATTAGGCGCTTTCACGAGCTACAACAACCAGAGCC 1018 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1129 TACGACATGAAGGGTTTCTTGGAGCATTAGGCGCTTTCACGAGCTACAATGACCAGAGCC 1188 Query 1019 ATAACGATTTAAAACCGCATCATCACACTGTGCAAAGAGCAATTCTCAACTGTTCAGGTG 1078 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1189 ATAACGATTTAAAACCGCATCATCACACTGTGCAAAGAGCAATTCTCAACTGTTCAGGTC 1248 Query 1079 ATAACTTACGACACATCCCCGTAACTTCAAATTTAAACGATAGTGAAACCATAGAATGTA 1138 ||||||| || |||||||| |||||||||||||||||||| || || ||||||||||||| Sbjct 1249 ATAACTTTCGGCACATCCCAGTAACTTCAAATTTAAACGAAAGCGAGACCATAGAATGTA 1308 Query 1139 GCATCAATTTAGTTTAGTTGGTTATCACCAGTTGTATTGTTATCAATTCAGT--AGAAAT 1196 ||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||| Sbjct 1309 GCATCAATTTAGTTTAGTT----ATCACCAGTTGTATTATTATCAATTCAGTGTAGAAAT 1364 Query 1197 ATGTGTAAGTTAATTAATTGTTTGAATCAAGAGCTGCG--T-AGTAGTTTGTTGAATGTT 1253 |||| | | ||| || ||||||| ||||||||||| | | |||||||||||||||| Sbjct 1365 ATGT-T---T-AATCAACTGTTTGAGTCAAGAGCTGCTCATTACTAGTTTGTTGAATGTT 1419 Query 1254 AGACAAATTTATGTAAGATGATTCACGTATTA 1285 ||||| |||||||||||||||||||||||||| Sbjct 1420 AGACACATTTATGTAAGATGATTCACGTATTA 1451 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 63302887245 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5