BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg475296 Length=682 Score E Sequences producing significant alignments: (Bits) Value AT1G60240.1 | Symbols: | NAC (No Apical Meristem) domain trans... 737 0.0 > AT1G60240.1 | Symbols: | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein | chr1:22215197-22216030 REVERSE LENGTH=834 Length=834 Score = 737 bits (399), Expect = 0.0 Identities = 492/536 (92%), Gaps = 9/536 (2%) Strand=Plus/Plus Query 1 GATGATGAAGTCAAGACGTGACCAATCAATTGAAGATGCAATCGTCGCAAATTATTTGAA 60 ||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||| Sbjct 84 GATGATGAAGTCAAGACGTGAACAATCAATCGAAGAAGCAATCGTCGCAAATTATTTGAA 143 Query 61 GATGATGATCGATAACGTAATCGTTTGGCCTCGTCACTTCCTCCGAAGTC-AAGACGTGT 119 |||||||||||||||||||| |||||||||||| |||||||||||||| | ||||||||| Sbjct 144 GATGATGATCGATAACGTAAACGTTTGGCCTCGCCACTTCCTCCGAAG-CGAAGACGTGT 202 Query 120 ACTGCAAGAATCCATGGACGCTTTTCGTTACTCGAGATCCTATGGTCCTACAAGCCGGAG 179 ||||||||||||| |||||||||||||||||| |||||||||| ||||||| |||| Sbjct 203 ACTGCAAGAATCCGTGGACGCTTTTCGTTACTAGAGATCCTATAATCCTACACTTCGGAC 262 Query 180 GATACTTCTTCGTTAACCGGAGTGTGAATTCAGGTAAAACCGATGGATGTGAATACGGTT 239 |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| Sbjct 263 GATACTTCTTCGTTAATCGGAGTGTGAATTCAGGTTTAACCGATGGATGTGAATACGGTT 322 Query 240 GTTGGAGAATCATTGGTCGTGATAAAGTGATCAAGTCGGTGACGACCGGGAAGATTCTAG 299 ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 323 GTTGGAGAATCATCGGTCGTGATAGAGTGATCAAGTCGGTGACGACCGGGAAGATTCTAG 382 Query 300 GGTTAAAGAAGGTTTATAAGTTCTGTAAAACTGA--GGAA-CCGAGATCG-TTTATTAAG 355 |||||||||||||||||||||||||| ||||||| |||| |||| |||| ||| ||||| Sbjct 383 GGTTAAAGAAGGTTTATAAGTTCTGTGAAACTGATCGGAAACCGAAATCGGTTT-TTAAG 441 Query 356 TTCGTGGAAATGGAGAAGAGAAGAGCAAGAGATAAAAGAATCTGGGCGATGGAGGAGTAT 415 ||| |||||| |||||||||||||| |||||||| | |||||||||||||||| |||||| Sbjct 442 TTCTTGGAAAAGGAGAAGAGAAGAGTAAGAGATAGACGAATCTGGGCGATGGAAGAGTAT 501 Query 416 AGGTTTGCAAGTGCGTGGAAACAAGATTACGTGATCTGCAAGATTAGACTTCT-TGATCC 474 |||||||||||| |||||||||||||||||||||||||||||||| ||| ||| | |||| Sbjct 502 AGGTTTGCAAGTACGTGGAAACAAGATTACGTGATCTGCAAGATTCGACGTCTGT-ATCC 560 Query 475 ACAGCCATTTGAGTACATGTTGTCTCACCATATTCGAGGTTACTATAAATGAATCA 530 ||| |||||||| ||||||||| | || || ||||||||||||||||||||||||| Sbjct 561 ACAACCATTTGACTACATGTTGGCCCAGCACATTCGAGGTTACTATAAATGAATCA 616 Score = 63.9 bits (34), Expect = 2e-09 Identities = 34/34 (100%), Gaps = 0/34 (0%) Strand=Plus/Plus Query 649 CTAGAATTGAAAAGAAAGATTGGTGGAATCGTTT 682 |||||||||||||||||||||||||||||||||| Sbjct 796 CTAGAATTGAAAAGAAAGATTGGTGGAATCGTTT 829 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 33003834579 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5