BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475351
Length=2655
Score E
Sequences producing significant alignments: (Bits) Value
AT1G59620.1 | Symbols: CW9 | Disease resistance protein (CC-NBS... 3478 0.0
AT1G58400.1 | Symbols: | Disease resistance protein (CC-NBS-LR... 246 7e-64
AT1G58602.1 | Symbols: | LRR and NB-ARC domains-containing dis... 215 2e-54
AT1G58410.1 | Symbols: | Disease resistance protein (CC-NBS-LR... 213 7e-54
AT1G59780.1 | Symbols: | NB-ARC domain-containing disease resi... 207 3e-52
AT1G59218.1 | Symbols: | Disease resistance protein (CC-NBS-LR... 108 3e-22
AT1G58848.1 | Symbols: | Disease resistance protein (CC-NBS-LR... 108 3e-22
AT1G53350.1 | Symbols: | Disease resistance protein (CC-NBS-LR... 60.2 1e-07
> AT1G59620.1 | Symbols: CW9 | Disease resistance protein (CC-NBS-LRR
class) family | chr1:21902284-21905685 FORWARD LENGTH=2808
Length=2808
Score = 3478 bits (1883), Expect = 0.0
Identities = 2429/2686 (90%), Gaps = 63/2686 (2%)
Strand=Plus/Plus
Query 1 ATGGCTGAGACAATTTTGTCGGTTGGAGTCGAAAAGCTTTGGAACCTCCTTGTCCGAGAA 60
|||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 122 ATGGCTGAGACACTTTTGTCATTTGGAGTCGAAAAGCTTTGGGACCTCCTTGTCCGAGAA 181
Query 61 TCTGAGCGATTTCAAGGAGTTAAAGAGCAATTTAATGTATTAAAAAGTGATCTGAATATG 120
||||| |||||||||||||||||| |||||||||||| ||| | ||||||| | |||| |
Sbjct 182 TCTGATCGATTTCAAGGAGTTAAAAAGCAATTTAATGAATTGAGAAGTGATTTAAATAAG 241
Query 121 TTAAGGTGCTTTTTGGAAGATGCAGATGCCAAGAAACATAAAAGTGCAATGGTGAGTAAC 180
|||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 242 TTAAGGTGCTTTTTAGAAGATGCAGATGCCAAGAAACATCAAAGTGCAATGGTGAGTAAC 301
Query 181 ACTGTGAAAGAAGTCAAGGAAATAGTTTATGACACAGAAGATATAATTGAAACCTTTCTT 240
||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 302 ACTGTGAAAGAGGTCAAGGAAATTGTTTATGACACAGAAGATATCATTGAAACCTTTCTT 361
Query 241 CGAAAAGAAGAACTTGGAAGAACAAGTGGCATCAAGAAACGTATCAAACAATTTGCTTGC 300
|||||| || |||| ||||||||||| ||||| ||||||||||||||| |||||||||||
Sbjct 362 CGAAAAAAACAACTCGGAAGAACAAGAGGCATGAAGAAACGTATCAAAGAATTTGCTTGC 421
Query 301 GTTATTCCTGATCGCCGGAAAATTGCTATCGATATGGAAGGCCTAAGTAACAGGATCT-C 359
||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| | |
Sbjct 422 GTTCTTCCTGATCGCCGGAAAATTGCTATCGATATGGAAGGCCTAAGTAAGAGGAT-TGC 480
Query 360 TAAGGTGATCTCCGATATGCAGAGTCTTGGCGTACAACAGGAAAATGTTAAGAAATTGGT 419
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 TAAGGTGATCTGCGATATGCAGAGTCTTGGCGTACAACAGGAAAATGTTAAGAAATTGGT 540
Query 420 TGGCCATTTGGTGGA-G--GAAAATAGCAGTCAAGTGGTTTCTATAACCGGGATGGGCGG 476
||||||||||||||| | ||| ||||||||||||| |||||||||||||||||||||||
Sbjct 541 TGGCCATTTGGTGGAGGTTGAAGATAGCAGTCAAGTAGTTTCTATAACCGGGATGGGCGG 600
Query 477 TATTGGTAAAACCACCCTCGCAAGACAAGTTTTTAATCATGAGACAGTAAAAAGTCATTT 536
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 601 TATTGGTAAAACCACCCTTGCAAGACAAGTTTTCAATCATGAGACAGTAAAAAGTCATTT 660
Query 537 TGCTGGACTCGCGTGGGTATGTGTTTCACAACAGTTTACAAGGAAGTATGTCTGGCAGAC 596
|||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 661 TGCTCAACTCGCGTGGGTATGTGTTTCACAACAGTTTACAAGGAAGTATGTGTGGCAAAC 720
Query 597 GATCTTGCGGAAACTTGGGCCAGAGTATATAGAGTCAGAGATGACAGAAGACGAACTTCA 656
|||||||||||| |||||||||| |||||| ||| ||||||||| ||||||||||||||
Sbjct 721 AATCTTGCGGAAAGTTGGGCCAGAATATATAAAGTTAGAGATGACGGAAGACGAACTTCA 780
Query 657 AGAAAAACTCTTTCAAGTATTGGAAACACAAAAGGCTTTGATTGTCCTTGATGATATATG 716
|||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||
Sbjct 781 AGAAAAACTCTTTCGCCTATTGGGTACACGAAAGGCTTTGATTGTCCTTGATGATATATG 840
Query 717 GAGAGAAGAAGATTGGGACATGATAGAACCAATCTTTCCACTGGGAAAAGGCTGGAAAGT 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 841 GAGAGAAGAAGATTGGGACATGATAGAACCAATCTTTCCACTGGGAAAAGGCTGGAAAGT 900
Query 777 ATTGCTTACTTCTCGCAATGAGGGTGTCGCATTACGAGCAAATCCAAATGGTTTCACCTT 836
||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||
Sbjct 901 ATTACTTACTTCTCGTAATGAAGGTGTCGCATTACGAGCAAATCCAAATGGTTTCATCTT 960
Query 837 TAAACCAGATTGCCTAACTCTTGAAGAGAGTTGGACAATTTTTCAAAGGATAGTTTTTCC 896
|||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||
Sbjct 961 TAAACCAGATTGCCTAACTCCTGAAGAGAGTTGGACAATTTTCCGAAGGATAGTTTTTCC 1020
Query 897 GGGAGAAAACACTACCGAATATAAGGTTGATGAAAAAATGGAAGAGCTGGGTAAGCAGAT 956
||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||
Sbjct 1021 GGGAGAAAACACTACAGAATATAAAGTTGATGAAAAAATGGAAGAGCTTGGTAAGCAAAT 1080
Query 957 GATCAAACATTGTGGAGGGTTACCATTGGCTCTTAAGGTGTTAGGCGGGTTGTTAGCTGC 1016
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct 1081 GATCAAACATTGTGGAGGGTTACCGTTGGCTCTTAAGGTGTTAGGCGGGTTGTTAGTTGT 1140
Query 1017 GCAATACACATTGCATGAGTGGAAAAGGATATATGAGAATATCAAGTCTCACATCGTTGG 1076
||| | ||||||| |||||||||||||||| |||| |||||| || ||||||||||||||
Sbjct 1141 GCACTTCACATTGGATGAGTGGAAAAGGATCTATGGGAATATTAAATCTCACATCGTTGG 1200
Query 1077 GGGGACTAGCTTCAATGACAGAAATTTGAGTTCGGTTTATCATATATTGTC-TCTGAGCT 1135
|| |||||||||||||||| |||| ||||||| ||||||||||| ||| | ||||||||
Sbjct 1201 AGGAACTAGCTTCAATGACAAAAATATGAGTTCAGTTTATCATATTTTG-CATCTGAGCT 1259
Query 1136 TTGAAGAGCTGCCTATATATTTGAAGCACTGCTTCCTCTACCTTGCCCAATTTCCAGAAG 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1260 TTGAAGAGCTGCCTATATATTTGAAGCACTGCTTCCTCTACCTTGCCCAATTTCCTGAAG 1319
Query 1196 ATTTTACAATAGATGTGGAAAAATTATCTTATTACTGGGCAGCAGAAGGAATACCAAGGC 1255
|||||||||||||| ||||||| |||||||| |||||||| ||||||||||| ||||| |
Sbjct 1320 ATTTTACAATAGATCTGGAAAAGTTATCTTACTACTGGGCCGCAGAAGGAATGCCAAGAC 1379
Query 1256 CAAGGTATTACGATGGAGCGACCATTCGAGAGATCGCAGATGGATACATAGAAGAATTGG 1315
| |||||||||||||||||||| |||||| || ||| |||||||||||||||||| ||||
Sbjct 1380 CTAGGTATTACGATGGAGCGACTATTCGAAAGGTCGGAGATGGATACATAGAAGAGTTGG 1439
Query 1316 TAAAGAGAAACATGGTTATTTATGAAAGAGACGCGAGAACTAGGAGATTTGAAACATGTC 1375
||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||
Sbjct 1440 TAAAGAGAAACATGGTTATTTCTGAGAGAGACGCTAGAACTAGGAGATTTGAAACATGTC 1499
Query 1376 ACTTGCATGATATTGTGAGAAAAGTTTGTCTACTTAAAGCTGAAGAAGAGAACTTCCTAA 1435
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||
Sbjct 1500 ACTTGCATGATATTGTGAGAGAAGTTTGTCTTCTTAAAGCTGAAGAAGAGAACTTGATA- 1558
Query 1436 AAATTGTTCACAGCACATCAAGTGAAAACTCGAAATCTCTTTGTAAATCTCGCAGACTTG 1495
| | | || | | ||||||| ||||||| | ||||| ||||||||||||
Sbjct 1559 -----G---A-A--AC-T---G--AAAACTCTAAATCTCCTAGTAAACCTCGCAGACTTG 1601
Query 1496 TAGTACAACAGTGTGATGAACCATATATGGAGGAGAAGCTGAAGAATCCAAAAATTAGAT 1555
| ||| || | ||||| || || ||||||||| ||||||||||||||||||| ||||||
Sbjct 1602 TCGTAAAAGGGGGTGATAAAACAGATATGGAGGGGAAGCTGAAGAATCCAAAACTTAGAT 1661
Query 1556 CTCTCTTGTTTATCGAGCAGCTTAG-----AT-GGGCAGTAAAAGGAAGCTTTACGAGGC 1609
||||||||||||||||| ||||| | || ||| | | ||| | | ||||||||||
Sbjct 1662 CTCTCTTGTTTATCGAGGAGCTTGGTGGTTATAGGGGATTCGAAGTATGGTTTACGAGGC 1721
Query 1610 TACAGTTGATGAGGGTGTTAGATCTTTC-TG-ATGTTCATTTTGGAGGGGAGTTACCCTC 1667
|||||||||||||||| |||||||| | || | ||| | ||||||||||||||||||||
Sbjct 1722 TACAGTTGATGAGGGTTTTAGATCTC-CATGGA-GTTGAGTTTGGAGGGGAGTTACCCTC 1779
Query 1668 TAGCATCGGACTGCTAATCCACTTGAGATATTTGAGTTTATATCGGGCACTCGTATCTCA 1727
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 1780 TAGCATCGGACTGCTAATCCACTTGAGATATTTGAGTTTATATCGGGCAAAAGCATCTCA 1839
Query 1728 TCTACCTTCTTCCATGCGGAATTTGAAGATGCTGCTGTATTTAAACCTATGTGTAGATCC 1787
||||||||| || |||| |||||||||||||||||| |||||||||||||||||| |
Sbjct 1840 TCTACCTTCGTCTATGCAGAATTTGAAGATGCTGCTCTATTTAAACCTATGTGTACAA-- 1897
Query 1788 TGATGAGGTATGTT-CAATTTCCATTCCCAATTTATTGAAAGAGATGC-AGGAATTGAAA 1845
|| ||| | |||| || ||| |||||||||||| ||||||||||||| || | |||||
Sbjct 1898 -GA-GAG-T-TGTTACA-TTTACATTCCCAATTTCTTGAAAGAGATGCTAG-AGCTGAAA 1951
Query 1846 TACCTCTCTCTCCCGTTAAGAATGCATGATACG--CATGGGAGAGTGGGGG-ATCTCCAG 1902
|||||||||||||| |||||||| |||||| | |||||| ||||||||| |||| |||
Sbjct 1952 TACCTCTCTCTCCCACTAAGAATGGATGATAAGAGCATGGGGGAGTGGGGGGATCTTCAG 2011
Query 1903 TTTATGACCCGGCTCAGAACCCTCTCTATCTATATCAGAGGCAGGTTGACTATGAAAACT 1962
|||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct 2012 TTTATGACCCGGCTTAGAGCCCTCTCTATCTATATCAGAGGCAGGTTGAATATGAAAACT 2071
Query 1963 CTATCTTCATCTCTAAGTGAATTGAGACACTTGGAAAATCTTACTATCTGTTATTACCCG 2022
|||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||
Sbjct 2072 CTATCTTCATCTCTAAGTAAACTGAGAGACTTGGAAAATCTTACTATCTGTTATTACCCG 2131
Query 2023 ATGTATGCTCCCATGAGTGCTAAAGAAGGATTAGTTTTGGATTGCGCTAATCTCAAACAT 2082
||||||||||||||||||| || |||||||||||||||||| |||| | | ||||| |||
Sbjct 2132 ATGTATGCTCCCATGAGTGGTATAGAAGGATTAGTTTTGGACTGCGATCAGCTCAAGCAT 2191
Query 2083 CTGAAGTTGAGAATATATATGCCAAGGTTACCTGATGAACAACAATTTCCTTCTTACCTT 2142
||||| |||||||||||||||||||||||||||||||||||||| ||||||| | |||
Sbjct 2192 CTGAATTTGAGAATATATATGCCAAGGTTACCTGATGAACAACATTTTCCTTGGCATCTT 2251
Query 2143 AGAAACATATCTCTAGCTGAGTGTTGTTTGAAGGAAGATCCAATGCCGATTCTAGAGAAG 2202
|||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct 2252 CGAAACATATCTCTAGCTGAGTGTTGTTTGAAGGAGGATCCAATGCCGATTTTAGAGAAG 2311
Query 2203 CTGATTCACTTAAATGAGGTCAGTTTATCGCATCAATCTTTTTGCGGGAAGAGAATGGTT 2262
||| |||| ||||| |||||||||||||| ||||||||||| || |||||||||||||||
Sbjct 2312 CTGCTTCAATTAAACGAGGTCAGTTTATCTCATCAATCTTTCTGTGGGAAGAGAATGGTT 2371
Query 2263 TGCTCGGGTGGTGGGTTTCCTCAATTGCTGAAGCTCGATTTGTGTGGACTAGATGAATGG 2322
||||||| |||||||||||||||||||| ||||||||||||||||||||||| || |||
Sbjct 2372 TGCTCGGATGGTGGGTTTCCTCAATTGCAAAAGCTCGATTTGTGTGGACTAGAGGAGTGG 2431
Query 2323 GAAGAGTGGATAGTAGAAGAAGGCTCCATGCCCCTTCTTCATAAGCTGACTCTCCGCAAC 2382
|||||||||||||| ||||||||||||||||| | ||||||||||||||| ||||||||
Sbjct 2432 GAAGAGTGGATAGTCGAAGAAGGCTCCATGCCACGGCTTCATAAGCTGACTATCCGCAAC 2491
Query 2383 GATCCTAAATTAAAGGAGTTTCCTGATGGGCTGAAATTTATCACATCTTTGGAAGAACTG 2442
|||||||||||||||||| ||||||||||| ||||||||||||| || ||| ||||| ||
Sbjct 2492 GATCCTAAATTAAAGGAGCTTCCTGATGGGTTGAAATTTATCACTTCCTTGAAAGAAGTG 2551
Query 2443 CATGTCATCTTAAATAATTGGGACTTTAAGAAGAAACTGTCCAGGGGAGGAGCAGATTAT 2502
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2552 CATGTCATCTTAAATAATTGGGACTTTAAGAAGAAACTGTCCAGGGGAGGAGAAGATTAC 2611
Query 2503 TACAAAGTCCAACACATTCCTCTCGTTCGATTTCTCTAAGCCTATCAAATTATAGTCACT 2562
||||||||||||||||||||||| ||||||||||| |||||||||| |||| ||||||||
Sbjct 2612 TACAAAGTCCAACACATTCCTCTTGTTCGATTTCTTTAAGCCTATCCAATTGTAGTCACT 2671
Query 2563 CAGGTAATATATTCTTTCCGCATGTCATTCT-GCAATTAGTATAATTCTCTTT-T----- 2615
||||||||||||||||||| ||||||||||| | | |||||||||||||||| |
Sbjct 2672 CAGGTAATATATTCTTTCCTCATGTCATTCTAG-AGCTAGTATAATTCTCTTTGTGTTGT 2730
Query 2616 -A-TT-T----GCGTTACCAAGCGACTCGGCTTGACTGCTACAATC 2654
| || | | |||||||||||||||||||||||||||||||||
Sbjct 2731 CAGTTATTTATGTGTTACCAAGCGACTCGGCTTGACTGCTACAATC 2776
> AT1G58400.1 | Symbols: | Disease resistance protein (CC-NBS-LRR
class) family | chr1:21696165-21699118 REVERSE LENGTH=2703
Length=2703
Score = 246 bits (133), Expect = 7e-64
Identities = 279/348 (80%), Gaps = 16/348 (5%)
Strand=Plus/Plus
Query 2072 ATCTCAAAC-ATCTGAAGTTGAGAATATATATGCCAAGGTTACCTGATGAACAACAATTT 2130
|||| |||| || |||| ||||| |||||||||||| |||||||||||||||||| ||
Sbjct 2231 ATCTAAAACAAT-TGAATTTGAGGTTATATATGCCAAAGTTACCTGATGAACAACACTTC 2289
Query 2131 CCTTCTTACCTTAGAAACATATCTCTAGCTGAG-TGTTGTTTGAAGGAAGATCCAATGCC 2189
|||||| |||||| || ||||||||||| || | ||||||||| ||| ||||| | ||
Sbjct 2290 CCTTCTCACCTTACAAGCATATCTCTAGATG-GTTGTTGTTTGGTGGAGGATCCGTTACC 2348
Query 2190 GATTCTAGAGAAGCTGA-TTCACTT-AAATGAGG-TCAGTTTATCG-C-ATCAATCTTTT 2244
|||||||||||| | | || | || ||| |||| || ||||| | | || | ||||
Sbjct 2349 GATTCTAGAGAA-ATTACTTGAGTTGAAA-GAGGTTC-GTTTA--GACTTTCGAGCTTTC 2403
Query 2245 TGCGGGAAGAGAATGGTTTGCTCGGGTGGTGGGTTTCCTCAATTGCTGAAGCTCGATTTG 2304
|| ||||||||||||||| |||||| ||||||||||||||||||| | ||| || |
Sbjct 2404 TGTGGGAAGAGAATGGTTAGCTCGGACGGTGGGTTTCCTCAATTGCACAGGCTATATATA 2463
Query 2305 TGTGGACTAGATGAATGGGAAGAGTGGATAGTAGAAGAAGGCTCCATGCCCCTTCTTCAT 2364
|| ||| ||| ||| ||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 2464 TGGGGATTAGCTGAGTGGGAAGAGTGGATAGTAGAAGAAGGCTCCATGCCACGTCTTCAT 2523
Query 2365 AAGCTGACTCTCCGCAAC-GATCCTAAATTAAAGGAGTTTCCTGATGG 2411
| |||||| | | || | || ||||||||| || ||||||||||
Sbjct 2524 ACTCTGACTATATGGAATTG-TCAAAAATTAAAGCAGCTTCCTGATGG 2570
> AT1G58602.1 | Symbols: | LRR and NB-ARC domains-containing disease
resistance protein | chr1:21746373-21764969 FORWARD LENGTH=4299
Length=4299
Score = 215 bits (116), Expect = 2e-54
Identities = 345/447 (77%), Gaps = 49/447 (11%)
Strand=Plus/Plus
Query 2106 AAGGTTACCTGATGAACAACAATTTCCTTCTTACCTTAGAAACATATCTCTAGCTGAGTG 2165
||| || |||| ||||||||| || |||||| |||||| || | ||| |||| || | |
Sbjct 3485 AAGCTT-CCTGGTGAACAACACTTCCCTTCTCACCTTACAACCGTATTTCTA-CT-CG-G 3540
Query 2166 T-TGT-T-TGAAGGAAGATCCAATGCCGATTCTAGAGAAGCTGATTCACTT-AAATGAGG 2221
| ||| | || |||| |||||||||| |||||||||||||||| ||||||| ||| |
Sbjct 3541 TATGTATGTGGAGGAGGATCCAATGCGGATTCTAGAGAAGCTGCTTCACTTGAAA--A-A 3597
Query 2222 TCAGTTT-ATCGCATCAATCTTTTTGCGGGAAGAGAATGGTTTGCTCGGGTGGTGGGTTT 2280
| |||| | | ||||||||| | ||||||||||||||||||||||| |||||||||
Sbjct 3598 T--GTTTCTTTGTTTCAATCTTTCAGTGGGAAGAGAATGGTTTGCTCGGGCGGTGGGTTT 3655
Query 2281 CCTCAATTGCTGAAGC--TCGATTTGTGTGGACTAGATGAATGGGAAGAGTGGATAGTAG 2338
|||||||||| ||||| || || | | | | |||| | |||||||||||||||||||
Sbjct 3656 CCTCAATTGCAGAAGCTTTCAATACG-G-GAAATAGA-G--TGGGAAGAGTGGATAGTAG 3710
Query 2339 AAGAAGGCTCCATGCCCCTTCTTCATAAGCT-GACTCTC-CGCAACGATCCTAAA-TTAA 2395
|| |||||||||||||||||||||||| || | | || | | ||| ||| ||||
Sbjct 3711 AACAAGGCTCCATGCCCCTTCTTCATACTCTCTA-TATCGGGGTTTG-TCC-AAACTTAA 3767
Query 2396 AGGAGTTTCCTGATGGGCTGAAATTTATCACA-TCTTTGGAAGAA-CTGCAT-GTCATCT 2452
||||| |||||||||||||| ||||||| | || || || || || || || |||
Sbjct 3768 AGGAGCTTCCTGATGGGCTGCGATTTATC-TATTCATT-AAAAAATTTG-ATAGT-ATC- 3822
Query 2453 TAAATAATTGGGACTTTAAGAAGAAACTGTCCAGG--GGAGGAGCAGATTATTACAAAGT 2510
||| || || | ||||||| | ||| | || ||||||| |||||||||||||||
Sbjct 3823 -AAA-AA----GA-TGGAAGAAGAGATTGT-C-GGAAGGAGGAGAAGATTATTACAAAGT 3873
Query 2511 CCAACACATTCCT-CTCGTTCGATTTC 2536
||||||||||||| || ||| || |||
Sbjct 3874 CCAACACATTCCTTCT-GTT-GAATTC 3898
> AT1G58410.1 | Symbols: | Disease resistance protein (CC-NBS-LRR
class) family | chr1:21701185-21704255 REVERSE LENGTH=2801
Length=2801
Score = 213 bits (115), Expect = 7e-54
Identities = 284/364 (78%), Gaps = 17/364 (5%)
Strand=Plus/Plus
Query 2059 TTGGATTGCGCTAATCTCAAACATCTGAAGTTGAGAATATATATGCCAAGG-TTACCTGA 2117
||||||| | || |||||||| | || | ||||| ||| | ||||||||| || ||| |
Sbjct 2227 TTGGATTTCACTTATCTCAAAAAGCTCACCTTGAGTATAGAGATGCCAAGGCTT-CCT-A 2284
Query 2118 TGA-ACAACAATTTCCTTCTTACCTTA-GAAACATATCTCTAGCTGAGTGTTGTTTGAAG 2175
| |||||| |||||||| |||||| | | || |||| || | ||||||||| ||
Sbjct 2285 AAATACAACACCTTCCTTCTCACCTTACG-GTCTTAGATCTATCTTACTGTTGTTTGGAG 2343
Query 2176 GAAGATCCAATGCCGATTCTAGAGAAGCTGATTC-ACTTAAATGAGGTCAGTTTATCGCA 2234
|||||||||||||||||||||||||| | | || | ||||| || | |||||| |
Sbjct 2344 GAAGATCCAATGCCGATTCTAGAGAA-ATTACTCGAGTTAAAAGATTTAAGTTTAGATTA 2402
Query 2235 TCAATCTTTTTGCGGGAAGAGAATGGTTTGCTCGGGTGGTGGGTTTCCTCAATTGCTG-A 2293
|| |||||| | ||||| || |||||||||||||| |||||||||||||||||||| | |
Sbjct 2403 TCTATCTTTCTCCGGGAGGAAAATGGTTTGCTCGGCTGGTGGGTTTCCTCAATTGC-GTA 2461
Query 2294 AGCTCGATTTGTG-TGGACTAGATGAATGGGAAGAGTGGATAGTAGAAGAAGGCTCCATG 2352
|||| | |||| | || || ||| || |||||||||||||||||||||||||||||||||
Sbjct 2462 AGCTAGCTTTG-GATGAACAAGAGGAGTGGGAAGAGTGGATAGTAGAAGAAGGCTCCATG 2520
Query 2353 CCCCTTCTTCATAAGCTGACTCTCCGCAACGATCCTAA-ATTAAAGGAGTTTCCTGATGG 2411
| | ||||||| || | | | | | | || || |||||||||| ||||||||||
Sbjct 2521 TCACGGCTTCATACTCTAAGTATTTGGA--GTTC--AACATTAAAGGAGCTTCCTGATGG 2576
Query 2412 GCTG 2415
||||
Sbjct 2577 GCTG 2580
> AT1G59780.1 | Symbols: | NB-ARC domain-containing disease resistance
protein | chr1:21993581-21997691 REVERSE LENGTH=2721
Length=2721
Score = 207 bits (112), Expect = 3e-52
Identities = 354/469 (75%), Gaps = 23/469 (5%)
Strand=Plus/Plus
Query 2075 TCAAACATCTGAAGTTGAGAATATATATGCCAAGGTTACCTGATGAACAACAATTTCCTT 2134
|||| || | |||||| | ||||||| ||| | ||||||||||| ||||| |||||||
Sbjct 2201 TCAAGCACCCGAAGTT--G-ATATATAGGCCGATGTTACCTGATGTGCAACATTTTCCTT 2257
Query 2135 CTTACCTTAGAAACATATCTCTAGCT-GAGTGTTGTTTGAAGGAAGATCCAATGCCGATT 2193
|| | |||| || ||||||||||| | | |||| |||| |||| ||||| ||||| | |
Sbjct 2258 CTCATCTTACAACCATATCTCTAG-TATATTGTTTTTTGGAGGAGGATCCGATGCCAACT 2316
Query 2194 CTAGAGAAGCTGATTC-ACTTAAATGAGGTCAGTTTATCGCATCAATC-TTTTTG-CGGG 2250
|||||||| ||| | | ||| ||| | ||| ||||| | | ||| | | || |||
Sbjct 2317 CTAGAGAAACTGCTACAACTGAAA-GTGGTTTCTTTATGGTA-CAA-CGCCTATGTTGGG 2373
Query 2251 AAGAGAATGGTTTGCTCGGGTGGTGGGTTTCCTCAATTGCTGAAGCTCGATTTGTGTGGA 2310
| ||||||||||||| | || ||||||||||||| ||||| | ||| || | || |||
Sbjct 2374 AGGAGAATGGTTTGCACCGGCGGTGGGTTTCCTCCATTGCACAGGCTTGAAATATGGGGA 2433
Query 2311 CTAGATGAATGGGAAGAGTGGATAGTAGAAGAAGGCTCCATGCCCCTTCTTCATAAGCTG 2370
||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2434 CTAGATGCCTTGGAAGAGTGGATAGTAGAAGAAGGCTCCATGCCCCTTCTTCATACTCTG 2493
Query 2371 -ACTCTCCGCA-AC-GATCCTAAATTAAAGGAGTTTCCTGATGGGCTGAAATTTATCACA 2427
| | | | | || | | |||||||||||| |||| ||||||||| ||||||||
Sbjct 2494 CA-TATT-GTAGACTG-TAAGAAATTAAAGGAGATTCCAGATGGGCTGCGATTTATCAGT 2550
Query 2428 TCTTTGGAAG-AACTG-CATGTCATCTTAAAT-AATTGGGACTTTAAGAAGAAACTGTCC 2484
|| || ||| || || | | || | |||| || | | ||| ||||||| | |||
Sbjct 2551 TCATTA-AAGGAATTGGC-TATCCGCACAAATGAAAAAGTA-TTTCAGAAGAAGGTATCC 2607
Query 2485 AGGGGAGGAGCAGATTATTACAAAGTCCAACACATTCCTCTCGTTCGAT 2533
| ||||||| |||||| || ||| | |||||| | ||||| ||||||
Sbjct 2608 AAAGGAGGAGAAGATTACTATAAAATGCAACACGTCCCTCTTATTCGAT 2656
> AT1G59218.1 | Symbols: | Disease resistance protein (CC-NBS-LRR
class) family | chr1:21828033-21832708 FORWARD LENGTH=3765
Length=3765
Score = 108 bits (58), Expect = 3e-22
Identities = 208/276 (75%), Gaps = 27/276 (10%)
Strand=Plus/Plus
Query 2274 TGGGTTTCCTCAATTGCTGAAGCTCGATTTGTGTGGA-CTAGATGAATGGGAAGAGTGGA 2332
||||||||| ||||||| ||| || || || | || ||||| ||||||||||||||||
Sbjct 3007 TGGGTTTCCACAATTGCAGAATCTTGAGTTAAAT-GAGCTAGAGGAATGGGAAGAGTGGA 3065
Query 2333 TAGTAGAAGAAGGCTCCATGCCCCTTCTTCATAAGCT--GACTCTCCGCAA-CGATCCTA 2389
||||||| || ||||||||||| |||||||||| || || | | | || | ||| |
Sbjct 3066 TAGTAGAGGATGGCTCCATGCCACTTCTTCATACTCTAAGAAT-T-TGGAATTG-TCC-A 3121
Query 2390 AA-TTAAAGGAGTTTCCTGATGGGCTGAAATTTATCACA-TCTTTGGAAGAACTGCATGT 2447
|| |||||| || | ||||||||| || ||||||| | || || ||||| | | |
Sbjct 3122 AAGTTAAAGCAGCTGCCTGATGGGTTGCGATTTATC-TATTCATT-AAAGAA-T---T-T 3174
Query 2448 CATCT-TAAATAATTGGGACTTTAAGAAGAAACTGTCCAGGGGAGGAGCAGATTATTACA 2506
| || | | || | || | ||||||| | |||| | ||||||| |||||||||||
Sbjct 3175 GA-CTGT-ACCAA-AGAGA-TGGAAGAAGAGATTGTCGAAAGGAGGAGAAGATTATTACA 3230
Query 2507 AAGTCCAACACATTCCT-CTCGTTCGATTTCT-CTA 2540
||||||||||||||||| || ||| || |||| |||
Sbjct 3231 AAGTCCAACACATTCCTTCT-GTT-GAATTCTACTA 3264
> AT1G58848.1 | Symbols: | Disease resistance protein (CC-NBS-LRR
class) family | chr1:21791783-21797050 FORWARD LENGTH=3967
Length=3967
Score = 108 bits (58), Expect = 3e-22
Identities = 208/276 (75%), Gaps = 27/276 (10%)
Strand=Plus/Plus
Query 2274 TGGGTTTCCTCAATTGCTGAAGCTCGATTTGTGTGGA-CTAGATGAATGGGAAGAGTGGA 2332
||||||||| ||||||| ||| || || || | || ||||| ||||||||||||||||
Sbjct 2999 TGGGTTTCCACAATTGCAGAATCTTGAGTTAAAT-GAGCTAGAGGAATGGGAAGAGTGGA 3057
Query 2333 TAGTAGAAGAAGGCTCCATGCCCCTTCTTCATAAGCT--GACTCTCCGCAA-CGATCCTA 2389
||||||| || ||||||||||| |||||||||| || || | | | || | ||| |
Sbjct 3058 TAGTAGAGGATGGCTCCATGCCACTTCTTCATACTCTAAGAAT-T-TGGAATTG-TCC-A 3113
Query 2390 AA-TTAAAGGAGTTTCCTGATGGGCTGAAATTTATCACA-TCTTTGGAAGAACTGCATGT 2447
|| |||||| || | ||||||||| || ||||||| | || || ||||| | | |
Sbjct 3114 AAGTTAAAGCAGCTGCCTGATGGGTTGCGATTTATC-TATTCATT-AAAGAA-T---T-T 3166
Query 2448 CATCT-TAAATAATTGGGACTTTAAGAAGAAACTGTCCAGGGGAGGAGCAGATTATTACA 2506
| || | | || | || | ||||||| | |||| | ||||||| |||||||||||
Sbjct 3167 GA-CTGT-ACCAA-AGAGA-TGGAAGAAGAGATTGTCGAAAGGAGGAGAAGATTATTACA 3222
Query 2507 AAGTCCAACACATTCCT-CTCGTTCGATTTCT-CTA 2540
||||||||||||||||| || ||| || |||| |||
Sbjct 3223 AAGTCCAACACATTCCTTCT-GTT-GAATTCTACTA 3256
> AT1G53350.1 | Symbols: | Disease resistance protein (CC-NBS-LRR
class) family | chr1:19903899-19907515 FORWARD LENGTH=2784
Length=2784
Score = 60.2 bits (32), Expect = 1e-07
Identities = 41/45 (91%), Gaps = 1/45 (2%)
Strand=Plus/Plus
Query 2174 AGGAAGATCCAATGCCGATTCTAGAGAAGCTGATTCACTT-AAAT 2217
||||||||||||||||||||||||||||| || |||| || ||||
Sbjct 2342 AGGAAGATCCAATGCCGATTCTAGAGAAGTTGCTTCATTTGAAAT 2386
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 131838726204
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5