BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg475358 Length=429 Score E Sequences producing significant alignments: (Bits) Value AT1G59530.1 | Symbols: ATBZIP4, bZIP4 | basic leucine-zipper 4 ... 538 2e-152 > AT1G59530.1 | Symbols: ATBZIP4, bZIP4 | basic leucine-zipper 4 | chr1:21868262-21868708 FORWARD LENGTH=447 Length=447 Score = 538 bits (291), Expect = 2e-152 Identities = 385/430 (90%), Gaps = 7/430 (2%) Strand=Plus/Plus Query 2 CGGTTCATATCTGCTTTGATGATCATGATACGATAACCGGTGATGAAATCACTGAAATAT 61 ||||||||| |||| || | || ||| ||||||||||||||||||||||| ||| |||| Sbjct 23 CGGTTCATAACTGC-TTCA--ATGATGCTACGATAACCGGTGATGAAATCATTGATATAT 79 Query 62 TGGCGTTTCTTCAATCAGACGAGTCGGGTATTCCAAGTGGTACAAACGAATTAGTACCGG 121 ||||||||||||||||||||||||||| | |||||| |||| |||||| ||||||||| Sbjct 80 TGGCGTTTCTTCAATCAGACGAGTCGGACAATCCAAGCGGTATAAACGAGGTAGTACCGG 139 Query 122 TTGATGAGAAGAAGAGAAGACGGACGATATCAAACCGGGAATCGGCAAAGAGATCGAGGT 181 | ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 140 TGGATGATAAGAAGAGAAGACGGACGATATCAAACCGGGAATCGGCCAAGAGATCGAGGA 199 Query 182 TGAAGAAGAAGAAACGTTTTGAAGAGTTAACCGAAGAAGTGAACCGGCTGAACCA-AAGG 240 |||| |||||||||||||||||||||||||| ||||| ||||||||| | ||| | ||| Sbjct 200 TGAAAAAGAAGAAACGTTTTGAAGAGTTAACTGAAGAGGTGAACCGGTTAAAC-ATAAGA 258 Query 241 AATGAGGAGTTGAAAAACCGGTTAGCTAATGTGGTTAGTTGTGGTAATTTCATATCTAGT 300 ||| ||||| |||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 259 AATCAGGAGCTGAAAAACCGGTTAGCTAATGTTGTTAGTTGTGGTAATTTTATATCTAGG 318 Query 301 GAGAATAACCGCTTAAAAACCGAATCGGTCTGCCTTGAAATTAGGCTTCTAGAGTTGTAC 360 ||||||||||| || |||||||||||||| |||||||| || |||||| ||||||||||| Sbjct 319 GAGAATAACCGGTTGAAAACCGAATCGGTTTGCCTTGAGATAAGGCTTTTAGAGTTGTAC 378 Query 361 CGGTTTTTAGTGGCCATTCAATCGCCAATCTCAACTAGAGTAAATTACATCACAGA-GCT 419 || |||||||||||||| ||||||||||||||||| || ||||||||||||||| | ||| Sbjct 379 CGTTTTTTAGTGGCCATGCAATCGCCAATCTCAACGAGTGTAAATTACATCACA-ACGCT 437 Query 420 CGAGATTTAA 429 |||||||||| Sbjct 438 CGAGATTTAA 447 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 20358438345 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5