BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475365
Length=5217
Score E
Sequences producing significant alignments: (Bits) Value
AT1G59453.1 | Symbols: | B-block binding subunit of TFIIIC | c... 6850 0.0
AT1G59077.1 | Symbols: | BEST Arabidopsis thaliana protein mat... 2691 0.0
AT1G58766.1 | Symbols: | BEST Arabidopsis thaliana protein mat... 2691 0.0
AT1G17450.2 | Symbols: | B-block binding subunit of TFIIIC | c... 2248 0.0
> AT1G59453.1 | Symbols: | B-block binding subunit of TFIIIC |
chr1:21846902-21853384 REVERSE LENGTH=5190
Length=5190
Score = 6850 bits (3709), Expect = 0.0
Identities = 4776/5274 (91%), Gaps = 141/5274 (3%)
Strand=Plus/Plus
Query 1 ATGGATTCGATTATATGCACGGCACTGGATGAAATCTGTTCTCAGGGAAACACAGGGATC 60
|||||||||||||||| ||| ||||| ||||||||||||||||| ||||||||||| |||
Sbjct 1 ATGGATTCGATTATATCCACAGCACTTGATGAAATCTGTTCTCAAGGAAACACAGGAATC 60
Query 61 GCTCTCGTTTCTTTATGGTCACGTCTCTCTACTCTTTCTTCTTCCGTCAAGGTTCATGTC 120
|||||||| |||||||||||||||||||| |||| ||||||||| ||||| ||||||
Sbjct 61 CCTCTCGTTACTTTATGGTCACGTCTCTCTCCTCTCTCTTCTTCCATCAAGACACATGTC 120
Query 121 TGGAGAAATCTTCTCACGATCCCTCAGCTCCAATTCAAGAC---TAAGAACACTGTCTAC 177
||||||||||||||||||||||||||||||||||||||||| |||||||| || |||
Sbjct 121 TGGAGAAATCTTCTCACGATCCCTCAGCTCCAATTCAAGACGAAGAAGAACACAGTGTAC 180
Query 178 GGATCATCAGATACTTCGATTCAACAGCTTGACGATGCAC-TAAGACTCGATTTAAGGAT 236
|||||||||||||||||||||||| | ||||| ||||| | ||||||||||||| || ||
Sbjct 181 GGATCATCAGATACTTCGATTCAAAACCTTGATGATGC-CTTAAGACTCGATTTGAGAAT 239
Query 237 CGTCGCTAATGAGAACTTACGAGCTAACTTCGTTGGCTTGTACGATACTCAGTCGAATAA 296
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 240 CGTCGCGAATGAGAACTTACGAGCTAACTTCGTTGGCTTGTACGATACTCAATCGAATAA 299
Query 297 CACTACTATTCCCGCGATTCAGCGACGTGTTCTTGAACGTTTGGCTATTGCTAGAGACAA 356
||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 300 CACGACTATTCCCGCGATTCAACGTCGTGTTCTTGAACGTTTGGCTATTGCTAGAGACAA 359
Query 357 TGGAGATGCACAAAATCTGCTTGCTAAAGAGTTTGGTATCGATGGAAGGAACTTCTTCTA 416
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 360 TGGTGATGCACAAAATCTGCTTGCGAAAGAGTTTGGTATCGATGGAAGGAACTTCTTCTA 419
Query 417 TAGTGTGAAGCAGCTTGAATCTCGAGGTTTGATTGTTAGGCAACCAGCAATTGTGAGAAC 476
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 420 TAGTGTAAAGCAGCTTGAATCTCGAGGTTTGATTGTTAGGCAACCAGCAATAGTGAGAAC 479
Query 477 TAAAGAAGTTGATTCCAAAACGACTTCATGTATTACCACCAACATGATATACTTAACTCG 536
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 480 TAAAGAAGTTGATTCCAAGACAACTTCATGTATTACCACCAACATGATATACTTAACTCG 539
Query 537 TTACGCCAAGCCTATGGGTTCGCAGCAGAGGTTTGAGATTTGTAAAGAGGACTCTATGTC 596
||||||||||||||||||||| || ||||||||||||||||| |||||||||||| ||||
Sbjct 540 TTACGCCAAGCCTATGGGTTCACAACAGAGGTTTGAGATTTGCAAAGAGGACTCTGTGTC 599
Query 597 TGAGCATGAGGCTACTGCCGCCGGAGATAGTTTGAAAGATGATACGCTTATTAACGATTT 656
||||||||| ||||||| ||| | | | | || || ||||| |||||||||||
Sbjct 600 AGAGCATGAGACTACTGCGGCC-G-G--A----G--AG--GACACGCTCATTAACGATTT 647
Query 657 TTTACCAGCAATGCAGGCAGTTTGTGATAAGCTCGAAGAAGCTAACGAGAAAGTTTTAGT 716
| ||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||
Sbjct 648 TCTACCAGCAATGCAGGAAGTTTGTGATAAGCTCGAAAAAGCTAACGACAAAGTTTTAGT 707
Query 717 TGTCTCGGATATTAAGCAAGACCTTGGTTATATGGGATCACATATAAGGCATAGAGCTTG 776
| ||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct 708 TATCTCGGACATTAAGCAAGACCTTGGTTATACGGGATCAGATATAAGGCATAGAGCTTG 767
Query 777 GAGAAGTGTTTTTCGCCGGTTGATAGACTCTCATGTAGTAGAGGAGTTTGATGCTATGGT 836
||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 768 GAGAAGTGTTTGTCGCCGGTTGATAGATTCTCATGTAGTAGAGGAGTTTGATGCCATGGT 827
Query 837 GAATAATAAGGTTGAAAGATGTCTCCGTTTGTTAAAAAGATTTTCAGCAGAAGATTTTAA 896
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 828 GAACAATAAGGTTGAAAGATGTCTCCGTTTGTTAAAAAGATTTTCAGCAGAAGATTTTAA 887
Query 897 CTATTCTAGGAAAAAGCAACTCCTAAAATTCGGAAGGAGTATTCAAAAAACAGAACAGAC 956
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 888 CTATTCTAGGAAAAAGCAACTCATAAAATTCGGAAGGAGTGTTCAAAAAACAGAACAGAC 947
Query 957 TTTGGAGCTTCCAATAGATAATCAAATTTATGATATGGTTGATGCTGAAGGTTCTAAAGG 1016
|||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct 948 TTTGGAGCTTTCAATAGATAATCAAATTTATGATATGGTTGATGCTCAAGGATCTAAAGG 1007
Query 1017 CTTGGCTGTTATGGAGGTATGCGAAAGACTTGGGATTGATAAGAAGAAGATCTATCCTCG 1076
||| |||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||
Sbjct 1008 CTTAGCTGTTATGGAGTTATGTGAAAGACTTGGGATTGATAAGAAGAAGATCTATGCTCG 1067
Query 1077 GCTTTGTAGTATTTGTTCAAGAGTCGGGATGCATTTACAGGCAGAAAGCCACAAGAAGAC 1136
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1068 GCTTTGTAGTATATGTTCAAGAGTTGGGATGCATTTACAGGCAGAAAGCCACAAGAAGAC 1127
Query 1137 TCGAGTATTTCGAGTTTGGACTTCTCGTCATACTC-G-----G---TCTG---AGTCTT- 1183
||||||||||||| ||||||||||||||||| ||| | | |||| ||| ||
Sbjct 1128 TCGAGTATTTCGACTTTGGACTTCTCGTCATGCTCGGTCCAAGTCTTCTGATAAGT-TTC 1186
Query 1184 CTGATAAAGCTGAAAATATTAGAGGGGAAAATAATGATTTTAGTACACCTCATGGTACCG 1243
||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |
Sbjct 1187 CTGATAAAGCTGAAAATATTAGAGGGGAAGATAATGATTCTAGTACACCTCATGGTACTG 1246
Query 1244 GTGGATTGG------CTAAGACCTCTACCGAACACAGT-TTTAAAGTTTCAGATGCTGAC 1296
|||||||| |||| ||| | | ||||||||| | || ||||||||||||||
Sbjct 1247 ATGGATTGGCTAAAACTAAAACCACAATGGAACACAGTACTGCAA-TTTCAGATGCTGAC 1305
Query 1297 --ATCTA-TACACCTACAACGT-TAACTGATTCTGAAAGGAATTCAGGAGCCAAAAGAAG 1352
|||| ||||||| ||| || |||||||||||||||||||||||||||||||||||||
Sbjct 1306 TTTTCTACTACACCTGCAA-GTGTAACTGATTCTGAAAGGAATTCAGGAGCCAAAAGAAG 1364
Query 1353 AAAGGTGGTTACACGTCGTAACTTACAAGAACCATTCAATGAGATCGGTGATAAGGTTGT 1412
|||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct 1365 AAAGGTACCTACACGTCGTAACTTACAAGAGTCATTCAATGAGATCGGTGAGAAGGTTGT 1424
Query 1413 TGAGGCTGCAATGGGGTCCCCTGATTTACCGAACTCGGCTAAATCAAAAGTGCAGCAACC 1472
| | ||||||| ||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 1425 TAATGCTGCAAAAGGGTCCCCTGATTTACCCAAGTCGGCTAAATCAAAAGTGCAGCAACC 1484
Query 1473 TCATGCTACTATCGAAAACTCTCGGAGAGAGCAGAGAATACTTGAGCGCTTAAATGAGGA 1532
|||||||||||| ||||||||| |||||||||| |||||||||||||| ||||| |||||
Sbjct 1485 TCATGCTACTATTGAAAACTCTAGGAGAGAGCACAGAATACTTGAGCGTTTAAAAGAGGA 1544
Query 1533 GAAGTTTGTTTTGAGAGCGGAGTTCCATAAATGGCTTCTAAGTTTTGAGAAA-GACAGGA 1591
||||||||||||||||| ||||||||||||||||||||| | |||||| ||| |||||||
Sbjct 1545 GAAGTTTGTTTTGAGAGTGGAGTTCCATAAATGGCTTCTTACTTTTGA-AAAGGACAGGA 1603
Query 1592 GCCCTAAGGTTGATAGGAAAACCATTTACAGAATTCTAAACAAGCTTCAAGA-AGAAGGG 1650
|||| ||||| ||||||||||||||||||||||||||| ||| || ||| || | |||||
Sbjct 1604 GCCCCAAGGTGGATAGGAAAACCATTTACAGAATTCTAGACAGGCGTCAGGACA-AAGGG 1662
Query 1651 CTCTGCAAATGCGTTGGTATTCGTGTTCCAAATGTAAATGATTGTGGTCGTAGTCGTTGC 1710
||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1663 CTCTGCAAATGTGTTGGTATTCGTGTTCCAAATGTAAATGATTGTGACCGTAGTCGTTGC 1722
Query 1711 TTTGTGATAGTTTTGCATCCATCTGTTCAAGGATTGAGTCGAGACGTAGGAAATGAAATT 1770
| |||||||||| ||||||||||||||||| |||||| ||||||| ||||||||||||||
Sbjct 1723 TCTGTGATAGTTCTGCATCCATCTGTTCAAAGATTGACTCGAGACATAGGAAATGAAATT 1782
Query 1771 CATGAAAGGATTAGGTCTTTTGAATTAGAATTCCGTGGCCAGAGATTATCGAAGAGGAAA 1830
||||| |||||||||||||||||||||| ||||||| ||||||||| |||||||||| ||
Sbjct 1783 CATGATAGGATTAGGTCTTTTGAATTAGGATTCCGTAGCCAGAGATCATCGAAGAGGGAA 1842
Query 1831 AGCAACGAGACAATTCCAGTATTGAATGTCGTTCAGAGAGGTAGAACTAATGCGGATTTA 1890
||| || ||||| | ||||||||||||| ||||| ||| | || | | | |
Sbjct 1843 AGCGACAAGACAGTCCCAGTATTGAATGACGTTC--AGA-G-AG--C---T----A--T- 1886
Query 1891 GATGCGCAAGCTAGCAAATCAGGAGTTATGCGAGTGAAAGGGAG-TGTTTTTGCAAAGAT 1949
| || ||||||||||||||||| |||||||| |||||| | |||| ||||||||||
Sbjct 1887 -A--CG--AGCTAGCAAATCAGGAGCTATGCGAGCCAAAGGG-GTTGTTCTTGCAAAGAT 1940
Query 1950 GGTTCGTGTGAAGCTTCTACACTGTTTCCTTTGGGACTATTATAGTAGTTCTTTGCCTGG 2009
| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct 1941 GTTTCGTGTGAAGCTTCTACACTGTTTCCTTTGGGACTATT-T--TAGTTCTTTGCCTGG 1997
Query 2010 CTGGGACAATGCCTTTTCTTCTATACATGATCATAAATCTGAGAACTTGTTTTCACTTAA 2069
|||||||| ||||| |||||||||||| |||| | |||| |||| ||||||||||||||
Sbjct 1998 CTGGGACAGTGCCTCTTCTTCTATACACCATCACATATCTAAGAATTTGTTTTCACTTAA 2057
Query 2070 AGATGCTTTTAGAGCCATGCCACTCCAACTATTTGTACAAGTTGTTGGATCTACTCAGAA 2129
||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2058 AGACGCTTTTAGAGCCATGCCACTCCAACTATTTTTACAAGTTGTTGGATCTACTCAGAA 2117
Query 2130 AGCTGATGATATAATGAAGAAATGCAAACAGGTTATGCGTCTTTCTGAGATTTCTAGCGA 2189
|||||||||||| |||||||||| ||||||||||||||||||||||||| || |||||||
Sbjct 2118 AGCTGATGATATCATGAAGAAATACAAACAGGTTATGCGTCTTTCTGAGCTTCCTAGCGA 2177
Query 2190 CA-AGTATAAGCTTCTAATGGATACTCGTGCCATTGGGGTATTATCGATGCTTATTGATA 2248
| ||||||| ||||||||||||||||||| |||||| |||||||||||||||| |||
Sbjct 2178 -AGAGTATAAACTTCTAATGGATACTCGTGTGATTGGGATATTATCGATGCTTATCAATA 2236
Query 2249 TTTTACGCCGGTTAAAGTTGATTCAGATGGTAAGTGATAGACTCAGACGTGACGAGATTG 2308
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2237 TTTTACGCCGGTTAAAGTTGATTCAGATGGTAAGTGATAGACTCAGACGTGATAAGATT- 2295
Query 2309 AGGAGAAGTATGCTAATTTAACACATGCAGTGGAGCTTAAACCTTATATAGAGGAACCTT 2368
|||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||
Sbjct 2296 --GAGAAGTATGCTAACTTAACACATGCAATGGAGCTTAAGCCTTATATAGAGGAACCTG 2353
Query 2369 TGTTTGTTGCTGCTAAATCCGATGTCACGTCTCTTGATTTTTGTCCGCGTATTCGGCATG 2428
|||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||
Sbjct 2354 TGTTTGTTGCTGCTAAATTCGATGTCACGTCTCTTGATTTTCGTCCACGTATTCGGCATG 2413
Query 2429 ACTTTATTCTATCAAATAGAGATGCTGTTGATGAATATTGGCTTACTCTAGAATATTGCT 2488
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2414 ACTTTATTCTATCGAATAGAGATGCTGTTGATGAATATTGGCTAACTCTAGAATATTGCT 2473
Query 2489 ATGCTGCTGCTGATCACAG-AGCTGCTAAGCAAGCATTTCCGGGATCTGTTTCTCAAGAG 2547
|||||||| |||||||| | ||||||||||||||||||||| ||||||||||||||||||
Sbjct 2474 ATGCTGCTTCTGATCAC-GAAGCTGCTAAGCAAGCATTTCCAGGATCTGTTTCTCAAGAG 2532
Query 2548 GTTTTTGGTGTCCGCTCTTGGGCCTCAGATAATGTCATGACAGCGGAACAGCGTGCGAAG 2607
|||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 2533 GTTTTTGGTGTCCGCTCTTGGGCCTCAGATCATGTCATGACAGCAGAACAGCGTGCGAAG 2592
Query 2608 CTCTTACAGTGTATTGCAATCGATGAAAAGGAAAAAATCTCATTCAAAGAGTGTGAGAAG 2667
||||||||||| | |||||||| |||| |||| |||||||||||||||||||||||
Sbjct 2593 CTCTTACAGTG---T---ATCGATGAGAAGGCAAAACTCTCATTCAAAGAGTGTGAGAAG 2646
Query 2668 ATTT-CTAAGGATCTGAACCTGACCATAGAGCAGGTTATGCATGCT-TATTACGCGAAGC 2725
||| | |||||||| |||||||||||||||||||||||||||| | ||| | |||||||
Sbjct 2647 -TTTGCCAAGGATCTAAACCTGACCATAGAGCAGGTTATGCATG-TCTATCATGCGAAGC 2704
Query 2726 ATGGAAGACGCGTG--G---AA-TC-AAA-AT-----CAAA-----AGATAATAGTCCTT 2767
|||||||||| ||| | || || ||| || ||| ||| ||||||||||
Sbjct 2705 ATGGAAGACGTGTGAAGTCAAATTCAAAAGATAAAAATAAAGCTGTAGAAAATAGTCCTT 2764
Query 2768 CATCTTCCAGGAAAAGAAAAAGAGCATCTCTTGTAAAGACTAGAGGAGAAGGTGTCAGAT 2827
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 2765 CATCTTCCAAGAAAAGAAAAAGAGCATCTCTTGTAAAGACTAAAGGAGAAGGTGTCAAAT 2824
Query 2828 CCATAACAGTAGATGGACAGAAGGTTCTAAATTCTGAAGCCATTGATGCCTCAACTAGTG 2887
|||||| ||||||||||||||| |||||||||||||| |||||||||||||||| |||||
Sbjct 2825 CCATAATAGTAGATGGACAGAAAGTTCTAAATTCTGATGCCATTGATGCCTCAAATAGTG 2884
Query 2888 AGAATTTTCAAGATTCATTACAAGATGACCAAACCCCCATTCCAATGCATCGACAAGAAA 2947
||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2885 AGAGTTTTCAAGATTCATTACAAGATGACCAAACCCCCATTCAAATGCATCGACAAGAAC 2944
Query 2948 ATGCAGAGATAAGCGATTTTACTGAAGATGAAGGTCAGTGTTGTTCCATCATCAACCGGC 3007
|||||||||||||| || |||||||||||||| |||||||| | |||||||| |||
Sbjct 2945 ATGCAGAGATAAGCAATCTTACTGAAGATGAACCTCAGTGTTCTAATATCATCAATAGGC 3004
Query 3008 ATGCAAGTTCAAAGACTAGATCAAC-TCCTTTACAAAGATTTTCGTGGACAGATGAGGCA 3066
|||||||||||||||| ||||| || ||||| |||||||||| |||||||||||||||||
Sbjct 3005 ATGCAAGTTCAAAGACCAGATC-ACTTCCTTCACAAAGATTTACGTGGACAGATGAGGCA 3063
Query 3067 GACAGGAAATTGTTGTCTAAATATGTTAGACACCGTGCAGCTCTTGGGGCAAAATTTCAT 3126
||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 3064 GACAGGAAATTGTTGAGTAAATATGCTAGACACCGTGCAGCTCTTGGGGCAAAATTTCAT 3123
Query 3127 GGAGTAAATTGGGCTTCAGTTCCAGAACTACCTGCACCTCCTTTACCTTGCAAGCGACGG 3186
|||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct 3124 GGAGTAAATTGGGCTTCAGTTCAAGAACTACCTGCACCTCCTTTACCTTGCAAGAGACGG 3183
Query 3187 ATTCAAACATTGATGAAGAATGATAAAGTTCGGAAGGCGGTCATGAGGCTTTGCAATCTG 3246
||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct 3184 ATTCAAACAATGATGAGGAATGATAAAGTTCGTAAGGCGGTCATGAGGCTTTGCAATCTA 3243
Query 3247 CTCAGTGAGCGTTATGCAAGACATCTAAAGACGGAATCCGGTTGTGTTGAGCATCGTAAA 3306
||||||||||||||||||| |||||||||||||||||| | || ||||||||||||||||
Sbjct 3244 CTCAGTGAGCGTTATGCAAAACATCTAAAGACGGAATCAGATTCTGTTGAGCATCGTAAA 3303
Query 3307 GATGAAGGAAAATGGGATGACTTCAATGAAAAGAGTATAAGTCAAGCCTTTAATAATGTT 3366
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 3304 GATGAAGGAAAATGGGATGACTTCAATGAAAAGAGTATAAGCCAAGCCTTTAATAATGTT 3363
Query 3367 CTTGAGCTCAAGAAGATGGCTAAACTGCTGCCCTCTAAACGGAGGAGACCTGCAATTCAC 3426
||||||||||||||||||| ||||||| |||||||| |||||| |||||||| |||||||
Sbjct 3364 CTTGAGCTCAAGAAGATGGGTAAACTGATGCCCTCTCAACGGACGAGACCTGAAATTCAC 3423
Query 3427 TCAGAGGACATTCAAACTTTTTCTATGGATCAAGTTAAAGATACATCTCGACGAGCTGGA 3486
||||||||||||||||| ||||||| |||||||||||||||||| | | |
Sbjct 3424 ACAGAGGACATTCAAACTGTTTCTATTGATCAAGTTAAAGATACA--T-------C--G- 3471
Query 3487 CATTATCGTCTTCATCAAATTTTTAAGCATGTAGATGAAAAGGACACTGGTAGTGTACAA 3546
||||||||||| |||||||||||||||||||||||||||| |||| || |||||
Sbjct 3472 ------CGTCTTCATCAGATTTTTAAGCATGTAGATGAAAAGGACAATGGTTGTATACAA 3525
Query 3547 GTGCAGAAATCTCTGGTAGTATCTACTGCTGTAGAACTGTTGAAGCTTGTCTTTCTAAGC 3606
|||||| ||||||||||||| ||||| ||||| |||||||| |||||||| |||||||||
Sbjct 3526 GTGCAGGAATCTCTGGTAGTGTCTACCGCTGTTGAACTGTTAAAGCTTGTGTTTCTAAGC 3585
Query 3607 ATGCCTACTGCACCTGGTATGCCAAATTTGTTGGAAGATACCTTACGACGATATTCCGAG 3666
||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct 3586 ATGCCTACTGCACCTAGTATGCCAAATTTACTGGAAGATACCTTACGACGATATTCCGAG 3645
Query 3667 GGTGACCTCTTCACCGCCTATAGCTACCTCCGAGACAGAAAGTTCCTGGTTGGTGGAAGT 3726
||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct 3646 GGTGACCTCTTCACCGCCTATAGCTACCTCCGAGACAAAAAGTTCTTGGTTGGTGGAAGT 3705
Query 3727 GGTGGACAACCATTTGTGCTT-TCTCAAAACTTT-TTGCATAGTATTTCAAAGTCACCAT 3784
| |||||||||||||||| || ||||| || ||| |||||||||||||||||||||||||
Sbjct 3706 GATGGACAACCATTTGTG-TTATCTCAGAA-TTTCTTGCATAGTATTTCAAAGTCACCAT 3763
Query 3785 TCCCGGTTAATACTGGGAAAAGAGCTGCCAAGTTCTCAAGTTGGCTTCTCGAACACGAAA 3844
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 3764 TCCCGGTTAATACTGGGAAAAGAGCTGCCAAGTTCTCAAGTTGGCTTGTCGAACACGAAA 3823
Query 3845 GAGACCTTATGGCTGGGGGAGTCACTCTTACTTCAGATTTACAATGTGGTGATGTTTTAA 3904
|||| ||||||| || |||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 3824 GAGAACTTATGGATGAGGGAGTCACTCTTACTTCAGATTTGCAATGTGGTGATGTTTTGA 3883
Query 3905 ATTTCTTTTCATTGGTTGCTTCTGGTGAACTCTCTATATCTGTATCCTTACCTGAAGAAG 3964
||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||
Sbjct 3884 ATTTCTTTTCATTGGTTGCTTCTGGTGAACTCTCTTTATCTGTATCTTTGCCTGAAGAAG 3943
Query 3965 GTGTTGGAGAGCCTGAACATCGAAGAGGTTTAAAACGTAAAGCTGATGACGTAGAAGAAT 4024
||||||| ||||||||||||||||||||||||||||||| |||||| || ||||||||||
Sbjct 3944 GTGTTGGGGAGCCTGAACATCGAAGAGGTTTAAAACGTAGAGCTGAGGATGTAGAAGAAT 4003
Query 4025 CTGAAACT-GATAGTGCTAAGAAATTTAAGCTATTAGGCGAAGGTGAAAGCAACGTCCGA 4083
||||| || ||||||||||||||||||||| || |||| |||||||||| ||||||||||
Sbjct 4004 CTGAA-CTTGATAGTGCTAAGAAATTTAAGTTACTAGGTGAAGGTGAAATCAACGTCCGA 4062
Query 4084 AAGGAAAAAGGTTTCCCTGGTATAGCAGTATCTGTTCGTCGTGTAAATCTACCAATAGCG 4143
|||||||| |||||||||||| ||||||||||||||| |||||||| | ||||||||||
Sbjct 4063 AAGGAAAAGGGTTTCCCTGGTTTAGCAGTATCTGTTCATCGTGTAACTATACCAATAGCT 4122
Query 4144 AACGCAGTAGAGTTGTTTAAGGATGATGACTCTTGTTCTGGTGAACTTCATTTCAAGTCG 4203
|||||| |||||||||||||||||||||||||||| || |||||||||||||||| ||||
Sbjct 4123 AACGCAATAGAGTTGTTTAAGGATGATGACTCTTGGTCCGGTGAACTTCATTTCATGTCG 4182
Query 4204 GGAGAAACAAATAATCGCTGTGGTTCTGATAATATGAAAGAACTATTCAACTCTACTGAT 4263
||||||||||||||| |||||||||||||| ||||||||||||| || |||||| |||
Sbjct 4183 GGAGAAACAAATAATGGCTGTGGTTCTGATGATATGAAAGAACTTTTGGACTCTAAGGAT 4242
Query 4264 GCTACTGTGATACCAGGTAGTTTAGGTGATTCTCCTTGGCAAGCAATGGCCAGTGTTGCT 4323
||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct 4243 GCTACTGTGATACCAGGTAGTTTAGTTGATTCTCCTTGGCAAGCAATGGCTAGTGTTGCT 4302
Query 4324 AGTTGTATTATGTCCGGATCTGCAGATGAGCAACTTAGTTTATTCAGTCCCGGGGTTTTT 4383
||||||||||||||||| |||||||| ||||||| |||||| ||||||||| ||||||
Sbjct 4303 AGTTGTATTATGTCCGGTTCTGCAGAGGAGCAACAGAGTTTAATCAGTCCCGAGGTTTTC 4362
Query 4384 GAAACGGTTTCCAATGCCCTTCACAAGGCTGGTGACCAAGGTCTAAGTACTGAAGAAGTC 4443
||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 4363 GAAGCGGTTTCCAATGCCCTTCACAAGGCTGGTGACCAAGGTCTAAGCATTGAAGAAGTC 4422
Query 4444 CACTGTCTTATTAATATTCCAAGCCAAGAAACTTGTGACTGCATTGTAGAGGTACTTCAA 4503
|||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 4423 CACTTTCTTATTAATATTCCAAGCCAAGAAACTTGTGACTGCATTGTAGAAGTACTTCAA 4482
Query 4504 ACATTTGGAGTAGCTTTAAAGGTAAATGGCTATGATAATTTCCGTCTTGTCCAATCGCTC 4563
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 4483 ACATTTGGAGTAGCTTTGAAGGTAAATGGCTATGATAATTTCCGTCTTGTCCATTCGCTC 4542
Query 4564 TACCGATCAAAGTACTTCTTGACATTGGAGGATGGAGGAACTACCAAAAATGGTCAACAG 4623
|||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||
Sbjct 4543 TACCGATCAAAGTACTTCTTGACATTGGCGGATGGTGGAACTACCCAAAATGGTCAACAG 4602
Query 4624 TCTCTACCAGTAAACTACCTAGAGAGGGCTTTGGAGGAACATACGTCAAAAGATGCTGTC 4683
|||| ||||| |||||| |||| | |||||||||||||||| |||||| |||| ||||
Sbjct 4603 TCTCAACCAGCGAACTACGTAGAAAAAGCTTTGGAGGAACATAGGTCAAACGATGTTGTC 4662
Query 4684 GCCAGCGGGTACAGTACTTCACAAGAAAAGCGTGAGCGTGTCGCTGTGAACAACGTTCAC 4743
|||||| |||||||||||| |||| |||| | | ||| ||| ||||| |||||||
Sbjct 4663 ACCAGCGACTACAGTACTTCAAAAGACAAGCAAGTTCATGTTTCTGAGAACAGCGTTCAC 4722
Query 4744 AAGGTTACAATTCTTAACATTCCCGAAACGGCACAAACAAGCGATTTGCACGAAGCATCT 4803
||||| || |||||||||||||| |||| ||| ||||||||| |||||| || | ||||
Sbjct 4723 AAGGTCACGATTCTTAACATTCCTGAAATGGCTGAAACAAGCGGTTTGCAAGAGGAATCT 4782
Query 4804 ATCAAATCTCCATCTGTAACTTTTGGACCGGGTATCGAAAGTGAAACAAAGGAATCAACT 4863
| |||| |||||||||| ||||||||| || | |||||| | ||||| ||||||||||||
Sbjct 4783 ACCAAAGCTCCATCTGTTACTTTTGGAACGAGCATCGAAGGCGAAACGAAGGAATCAACT 4842
Query 4864 TCTGAGAATTCGCTACCTATGGCTATATTTCCATGGATAAACGCAGATGGATCAGTAAAT 4923
|||| ||| || | |||||| || || ||||||||||||||||||||||||||||||
Sbjct 4843 TCTGTGAAGTCACAACCTAT----AT-TT-CCATGGATAAACGCAGATGGATCAGTAAAT 4896
Query 4924 AAAGTTGTCTTCGATGGACTAATTCGCCGCTTTCTTGGTACCGTGATGCAAAATCCCGGT 4983
|||||||| |||||||||||| |||| ||| |||||||||||||||||||||||||||||
Sbjct 4897 AAAGTTGTATTCGATGGACTAGTTCGTCGCGTTCTTGGTACCGTGATGCAAAATCCCGGT 4956
Query 4984 ATACCAGAGGACGAAATCATAAACCAAATGGACGTACTAAATCCTCAGAGCTGTAGAAAG 5043
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4957 ATACCAGAGGAGGAAATCATAAACCAAATGGACGTACTAAATCCTCAGAGCTGTAGAAAG 5016
Query 5044 CTTATCGAGTTGATGACACTAGACGGGTATGTGAAAGTGAGGGAAATGGTGCAAACCAAA 5103
||| | ||||||||||||||||| ||||| ||||||| |||||||||||||||||||||
Sbjct 5017 CTTCTGGAGTTGATGACACTAGATGGGTACATGAAAGTAAGGGAAATGGTGCAAACCAAA 5076
Query 5104 TTCACCGGTCCTCCGTCTCTGTTAGCCGGTCTTCTATTTACCGGTCACAGAAAACCGGAG 5163
|| | ||||||||||||| ||||| |||||||||| ||||||||||| |||||| ||||
Sbjct 5077 TTTAGCGGTCCTCCGTCTTTGTTAACCGGTCTTCTCTTTACCGGTCATAGAAAAACGGAA 5136
Query 5164 CTTATCAGCCGCAAACACTTCTTTGCCAACTCCAAGGGACTCTTTGCCTTGTAA 5217
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 5137 CTTATCAGCCGGAAACACTTCTTTGCCAACTCCAAGGGACTCTTTGCATTGTAA 5190
> AT1G59077.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: B-block binding subunit of TFIIIC (TAIR:AT1G59453.1);
Has 63 Blast hits to 58 proteins in 18 species: Archae -
0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 55; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:21810644-21813023
REVERSE LENGTH=1998
Length=1998
Score = 2691 bits (1457), Expect = 0.0
Identities = 1840/2024 (91%), Gaps = 30/2024 (1%)
Strand=Plus/Plus
Query 3197 TGATGAAGAATGATAAAGTTCGGAAGGCGGTCATGAGGCTTTGCAATCTGCTCAGTGAGC 3256
|||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 2 TGATGAGGAATGATAAAGTTCGTAAGGCGGTCATGAGGCTTTGCAATCTACTCAGTGAGC 61
Query 3257 GTTATGCAAGACATCTAAAGACGGAATCCGGTTGTGTTGAGCATCGTAAAGATGAAGGAA 3316
||||||||| |||||||||||||||||| | || ||||||||||||||||||||||||||
Sbjct 62 GTTATGCAAAACATCTAAAGACGGAATCAGATTCTGTTGAGCATCGTAAAGATGAAGGAA 121
Query 3317 AATGGGATGACTTCAATGAAAAGAGTATAAGTCAAGCCTTTAATAATGTTCTTGAGCTCA 3376
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 122 AATGGGATGACTTCAATGAAAAGAGTATAAGCCAAGCCTTTAATAATGTTCTTGAGCTCA 181
Query 3377 AGAAGATGGCTAAACTGCTGCCCTCTAAACGGAGGAGACCTGCAATTCACTCAGAGGACA 3436
||||||||| ||||||| |||||||| |||||| |||||||| ||||||| |||||||||
Sbjct 182 AGAAGATGGGTAAACTGATGCCCTCTCAACGGACGAGACCTGAAATTCACACAGAGGACA 241
Query 3437 TTCAAACTTTTTCTATGGATCAAGTTAAAGATACATCTCGACGAGCTGGACATTATCGTC 3496
|||||||| ||||||| |||||||||||||||||| | | | ||||
Sbjct 242 TTCAAACTGTTTCTATTGATCAAGTTAAAGATACA--T-------C--G-------CGTC 283
Query 3497 TTCATCAAATTTTTAAGCATGTAGATGAAAAGGACACTGGTAGTGTACAAGTGCAGAAAT 3556
||||||| |||||||||||||||||||||||||||| |||| || ||||||||||| |||
Sbjct 284 TTCATCAGATTTTTAAGCATGTAGATGAAAAGGACAATGGTTGTATACAAGTGCAGGAAT 343
Query 3557 CTCTGGTAGTATCTACTGCTGTAGAACTGTTGAAGCTTGTCTTTCTAAGCATGCCTACTG 3616
|||||||||| ||||| ||||| |||||||| |||||||| |||||||||||||||||||
Sbjct 344 CTCTGGTAGTGTCTACCGCTGTTGAACTGTTAAAGCTTGTGTTTCTAAGCATGCCTACTG 403
Query 3617 CACCTGGTATGCCAAATTTGTTGGAAGATACCTTACGACGATATTCCGAGGGTGACCTCT 3676
||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 404 CACCTAGTATGCCAAATTTACTGGAAGATACCTTACGACGATATTCCGAGGGTGACCTCT 463
Query 3677 TCACCGCCTATAGCTACCTCCGAGACAGAAAGTTCCTGGTTGGTGGAAGTGGTGGACAAC 3736
||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||
Sbjct 464 TCACCGCCTATAGCTACCTCCGAGACAAAAAGTTCTTGGTTGGTGGAAGTGATGGACAAC 523
Query 3737 CATTTGTGCTT-TCTCAAAACTTT-TTGCATAGTATTTCAAAGTCACCATTCCCGGTTAA 3794
|||||||| || ||||| || ||| |||||||||||||||||||||||||||||||||||
Sbjct 524 CATTTGTG-TTATCTCAGAA-TTTCTTGCATAGTATTTCAAAGTCACCATTCCCGGTTAA 581
Query 3795 TACTGGGAAAAGAGCTGCCAAGTTCTCAAGTTGGCTTCTCGAACACGAAAGAGACCTTAT 3854
||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct 582 TACTGGGAAAAGAGCTGCCAAGTTCTCAAGTTGGCTTGTCGAACACGAAAGAGAACTTAT 641
Query 3855 GGCTGGGGGAGTCACTCTTACTTCAGATTTACAATGTGGTGATGTTTTAAATTTCTTTTC 3914
|| || |||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 642 GGATGAGGGAGTCACTCTTACTTCAGATTTGCAATGTGGTGATGTTTTGAATTTCTTTTC 701
Query 3915 ATTGGTTGCTTCTGGTGAACTCTCTATATCTGTATCCTTACCTGAAGAAGGTGTTGGAGA 3974
||||||||||||||||||||||||| |||||||||| || ||||||||||||||||| ||
Sbjct 702 ATTGGTTGCTTCTGGTGAACTCTCTTTATCTGTATCTTTGCCTGAAGAAGGTGTTGGGGA 761
Query 3975 GCCTGAACATCGAAGAGGTTTAAAACGTAAAGCTGATGACGTAGAAGAATCTGAAACT-G 4033
||||||||||||||||||||||||||||| |||||| || ||||||||||||||| || |
Sbjct 762 GCCTGAACATCGAAGAGGTTTAAAACGTAGAGCTGAGGATGTAGAAGAATCTGAA-CTTG 820
Query 4034 ATAGTGCTAAGAAATTTAAGCTATTAGGCGAAGGTGAAAGCAACGTCCGAAAGGAAAAAG 4093
|||||||||||||||||||| || |||| |||||||||| |||||||||||||||||| |
Sbjct 821 ATAGTGCTAAGAAATTTAAGTTACTAGGTGAAGGTGAAATCAACGTCCGAAAGGAAAAGG 880
Query 4094 GTTTCCCTGGTATAGCAGTATCTGTTCGTCGTGTAAATCTACCAATAGCGAACGCAGTAG 4153
||||||||||| ||||||||||||||| |||||||| | |||||||||| |||||| |||
Sbjct 881 GTTTCCCTGGTTTAGCAGTATCTGTTCATCGTGTAACTATACCAATAGCTAACGCAATAG 940
Query 4154 AGTTGTTTAAGGATGATGACTCTTGTTCTGGTGAACTTCATTTCAAGTCGGGAGAAACAA 4213
||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||
Sbjct 941 AGTTGTTTAAGGATGATGACTCTTGGTCCGGTGAACTTCATTTCATGTCGGGAGAAACAA 1000
Query 4214 ATAATCGCTGTGGTTCTGATAATATGAAAGAACTATTCAACTCTACTGATGCTACTGTGA 4273
||||| |||||||||||||| ||||||||||||| || |||||| |||||||||||||
Sbjct 1001 ATAATGGCTGTGGTTCTGATGATATGAAAGAACTTTTGGACTCTAAGGATGCTACTGTGA 1060
Query 4274 TACCAGGTAGTTTAGGTGATTCTCCTTGGCAAGCAATGGCCAGTGTTGCTAGTTGTATTA 4333
||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1061 TACCAGGTAGTTTAGTTGATTCTCCTTGGCAAGCAATGGCTAGTGTTGCTAGTTGTATTA 1120
Query 4334 TGTCCGGATCTGCAGATGAGCAACTTAGTTTATTCAGTCCCGGGGTTTTTGAAACGGTTT 4393
||||||| |||||||| ||||||| |||||| ||||||||| |||||| ||| ||||||
Sbjct 1121 TGTCCGGTTCTGCAGAGGAGCAACAGAGTTTAATCAGTCCCGAGGTTTTCGAAGCGGTTT 1180
Query 4394 CCAATGCCCTTCACAAGGCTGGTGACCAAGGTCTAAGTACTGAAGAAGTCCACTGTCTTA 4453
||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||
Sbjct 1181 CCAATGCCCTTCACAAGGCTGGTGACCAAGGTCTAAGCATTGAAGAAGTCCACTTTCTTA 1240
Query 4454 TTAATATTCCAAGCCAAGAAACTTGTGACTGCATTGTAGAGGTACTTCAAACATTTGGAG 4513
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1241 TTAATATTCCAAGCCAAGAAACTTGTGACTGCATTGTAGAAGTACTTCAAACATTTGGAG 1300
Query 4514 TAGCTTTAAAGGTAAATGGCTATGATAATTTCCGTCTTGTCCAATCGCTCTACCGATCAA 4573
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1301 TAGCTTTGAAGGTAAATGGCTATGATAATTTCCGTCTTGTCCATTCGCTCTACCGATCAA 1360
Query 4574 AGTACTTCTTGACATTGGAGGATGGAGGAACTACCAAAAATGGTCAACAGTCTCTACCAG 4633
|||||||||||||||||| |||||| ||||||||| |||||||||||||||||| |||||
Sbjct 1361 AGTACTTCTTGACATTGGCGGATGGTGGAACTACCCAAAATGGTCAACAGTCTCAACCAG 1420
Query 4634 TAAACTACCTAGAGAGGGCTTTGGAGGAACATACGTCAAAAGATGCTGTCGCCAGCGGGT 4693
|||||| |||| | |||||||||||||||| |||||| |||| |||| |||||| |
Sbjct 1421 CGAACTACGTAGAAAAAGCTTTGGAGGAACATAGGTCAAACGATGTTGTCACCAGCGACT 1480
Query 4694 ACAGTACTTCACAAGAAAAGCGTGAGCGTGTCGCTGTGAACAACGTTCACAAGGTTACAA 4753
||||||||||| |||| |||| | | ||| ||| ||||| |||||||||||| || |
Sbjct 1481 ACAGTACTTCAAAAGACAAGCAAGTTCATGTTTCTGAGAACAGCGTTCACAAGGTCACGA 1540
Query 4754 TTCTTAACATTCCCGAAACGGCACAAACAAGCGATTTGCACGAAGCATCTATCAAATCTC 4813
||||||||||||| |||| ||| ||||||||| |||||| || | ||||| |||| |||
Sbjct 1541 TTCTTAACATTCCTGAAATGGCTGAAACAAGCGGTTTGCAAGAGGAATCTACCAAAGCTC 1600
Query 4814 CATCTGTAACTTTTGGACCGGGTATCGAAAGTGAAACAAAGGAATCAACTTCTGAGAATT 4873
||||||| ||||||||| || | |||||| | ||||| |||||||||||||||| ||| |
Sbjct 1601 CATCTGTTACTTTTGGAACGAGCATCGAAGGCGAAACGAAGGAATCAACTTCTGTGAAGT 1660
Query 4874 CGCTACCTATGGCTATATTTCCATGGATAAACGCAGATGGATCAGTAAATAAAGTTGTCT 4933
| | |||||| || || |||||||||||||||||||||||||||||||||||||| |
Sbjct 1661 CACAACCTAT----AT-TT-CCATGGATAAACGCAGATGGATCAGTAAATAAAGTTGTAT 1714
Query 4934 TCGATGGACTAATTCGCCGCTTTCTTGGTACCGTGATGCAAAATCCCGGTATACCAGAGG 4993
||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1715 TCGATGGACTAGTTCGTCGCGTTCTTGGTACCGTGATGCAAAATCCCGGTATACCAGAGG 1774
Query 4994 ACGAAATCATAAACCAAATGGACGTACTAAATCCTCAGAGCTGTAGAAAGCTTATCGAGT 5053
| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 1775 AGGAAATCATAAACCAAATGGACGTACTAAATCCTCAGAGCTGTAGAAAGCTTCTGGAGT 1834
Query 5054 TGATGACACTAGACGGGTATGTGAAAGTGAGGGAAATGGTGCAAACCAAATTCACCGGTC 5113
||||||||||||| ||||| ||||||| ||||||||||||||||||||||| | |||||
Sbjct 1835 TGATGACACTAGATGGGTACATGAAAGTAAGGGAAATGGTGCAAACCAAATTTAGCGGTC 1894
Query 5114 CTCCGTCTCTGTTAGCCGGTCTTCTATTTACCGGTCACAGAAAACCGGAGCTTATCAGCC 5173
|||||||| ||||| |||||||||| ||||||||||| |||||| |||| ||||||||||
Sbjct 1895 CTCCGTCTTTGTTAACCGGTCTTCTCTTTACCGGTCATAGAAAAACGGAACTTATCAGCC 1954
Query 5174 GCAAACACTTCTTTGCCAACTCCAAGGGACTCTTTGCCTTGTAA 5217
| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1955 GGAAACACTTCTTTGCCAACTCCAAGGGACTCTTTGCATTGTAA 1998
> AT1G58766.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: B-block binding subunit of TFIIIC (TAIR:AT1G59453.1);
Has 63 Blast hits to 58 proteins in 18 species: Archae -
0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 55; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:21774381-21776765
REVERSE LENGTH=2003
Length=2003
Score = 2691 bits (1457), Expect = 0.0
Identities = 1840/2024 (91%), Gaps = 30/2024 (1%)
Strand=Plus/Plus
Query 3197 TGATGAAGAATGATAAAGTTCGGAAGGCGGTCATGAGGCTTTGCAATCTGCTCAGTGAGC 3256
|||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 2 TGATGAGGAATGATAAAGTTCGTAAGGCGGTCATGAGGCTTTGCAATCTACTCAGTGAGC 61
Query 3257 GTTATGCAAGACATCTAAAGACGGAATCCGGTTGTGTTGAGCATCGTAAAGATGAAGGAA 3316
||||||||| |||||||||||||||||| | || ||||||||||||||||||||||||||
Sbjct 62 GTTATGCAAAACATCTAAAGACGGAATCAGATTCTGTTGAGCATCGTAAAGATGAAGGAA 121
Query 3317 AATGGGATGACTTCAATGAAAAGAGTATAAGTCAAGCCTTTAATAATGTTCTTGAGCTCA 3376
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 122 AATGGGATGACTTCAATGAAAAGAGTATAAGCCAAGCCTTTAATAATGTTCTTGAGCTCA 181
Query 3377 AGAAGATGGCTAAACTGCTGCCCTCTAAACGGAGGAGACCTGCAATTCACTCAGAGGACA 3436
||||||||| ||||||| |||||||| |||||| |||||||| ||||||| |||||||||
Sbjct 182 AGAAGATGGGTAAACTGATGCCCTCTCAACGGACGAGACCTGAAATTCACACAGAGGACA 241
Query 3437 TTCAAACTTTTTCTATGGATCAAGTTAAAGATACATCTCGACGAGCTGGACATTATCGTC 3496
|||||||| ||||||| |||||||||||||||||| | | | ||||
Sbjct 242 TTCAAACTGTTTCTATTGATCAAGTTAAAGATACA--T-------C--G-------CGTC 283
Query 3497 TTCATCAAATTTTTAAGCATGTAGATGAAAAGGACACTGGTAGTGTACAAGTGCAGAAAT 3556
||||||| |||||||||||||||||||||||||||| |||| || ||||||||||| |||
Sbjct 284 TTCATCAGATTTTTAAGCATGTAGATGAAAAGGACAATGGTTGTATACAAGTGCAGGAAT 343
Query 3557 CTCTGGTAGTATCTACTGCTGTAGAACTGTTGAAGCTTGTCTTTCTAAGCATGCCTACTG 3616
|||||||||| ||||| ||||| |||||||| |||||||| |||||||||||||||||||
Sbjct 344 CTCTGGTAGTGTCTACCGCTGTTGAACTGTTAAAGCTTGTGTTTCTAAGCATGCCTACTG 403
Query 3617 CACCTGGTATGCCAAATTTGTTGGAAGATACCTTACGACGATATTCCGAGGGTGACCTCT 3676
||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 404 CACCTAGTATGCCAAATTTACTGGAAGATACCTTACGACGATATTCCGAGGGTGACCTCT 463
Query 3677 TCACCGCCTATAGCTACCTCCGAGACAGAAAGTTCCTGGTTGGTGGAAGTGGTGGACAAC 3736
||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||
Sbjct 464 TCACCGCCTATAGCTACCTCCGAGACAAAAAGTTCTTGGTTGGTGGAAGTGATGGACAAC 523
Query 3737 CATTTGTGCTT-TCTCAAAACTTT-TTGCATAGTATTTCAAAGTCACCATTCCCGGTTAA 3794
|||||||| || ||||| || ||| |||||||||||||||||||||||||||||||||||
Sbjct 524 CATTTGTG-TTATCTCAGAA-TTTCTTGCATAGTATTTCAAAGTCACCATTCCCGGTTAA 581
Query 3795 TACTGGGAAAAGAGCTGCCAAGTTCTCAAGTTGGCTTCTCGAACACGAAAGAGACCTTAT 3854
||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct 582 TACTGGGAAAAGAGCTGCCAAGTTCTCAAGTTGGCTTGTCGAACACGAAAGAGAACTTAT 641
Query 3855 GGCTGGGGGAGTCACTCTTACTTCAGATTTACAATGTGGTGATGTTTTAAATTTCTTTTC 3914
|| || |||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 642 GGATGAGGGAGTCACTCTTACTTCAGATTTGCAATGTGGTGATGTTTTGAATTTCTTTTC 701
Query 3915 ATTGGTTGCTTCTGGTGAACTCTCTATATCTGTATCCTTACCTGAAGAAGGTGTTGGAGA 3974
||||||||||||||||||||||||| |||||||||| || ||||||||||||||||| ||
Sbjct 702 ATTGGTTGCTTCTGGTGAACTCTCTTTATCTGTATCTTTGCCTGAAGAAGGTGTTGGGGA 761
Query 3975 GCCTGAACATCGAAGAGGTTTAAAACGTAAAGCTGATGACGTAGAAGAATCTGAAACT-G 4033
||||||||||||||||||||||||||||| |||||| || ||||||||||||||| || |
Sbjct 762 GCCTGAACATCGAAGAGGTTTAAAACGTAGAGCTGAGGATGTAGAAGAATCTGAA-CTTG 820
Query 4034 ATAGTGCTAAGAAATTTAAGCTATTAGGCGAAGGTGAAAGCAACGTCCGAAAGGAAAAAG 4093
|||||||||||||||||||| || |||| |||||||||| |||||||||||||||||| |
Sbjct 821 ATAGTGCTAAGAAATTTAAGTTACTAGGTGAAGGTGAAATCAACGTCCGAAAGGAAAAGG 880
Query 4094 GTTTCCCTGGTATAGCAGTATCTGTTCGTCGTGTAAATCTACCAATAGCGAACGCAGTAG 4153
||||||||||| ||||||||||||||| |||||||| | |||||||||| |||||| |||
Sbjct 881 GTTTCCCTGGTTTAGCAGTATCTGTTCATCGTGTAACTATACCAATAGCTAACGCAATAG 940
Query 4154 AGTTGTTTAAGGATGATGACTCTTGTTCTGGTGAACTTCATTTCAAGTCGGGAGAAACAA 4213
||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||
Sbjct 941 AGTTGTTTAAGGATGATGACTCTTGGTCCGGTGAACTTCATTTCATGTCGGGAGAAACAA 1000
Query 4214 ATAATCGCTGTGGTTCTGATAATATGAAAGAACTATTCAACTCTACTGATGCTACTGTGA 4273
||||| |||||||||||||| ||||||||||||| || |||||| |||||||||||||
Sbjct 1001 ATAATGGCTGTGGTTCTGATGATATGAAAGAACTTTTGGACTCTAAGGATGCTACTGTGA 1060
Query 4274 TACCAGGTAGTTTAGGTGATTCTCCTTGGCAAGCAATGGCCAGTGTTGCTAGTTGTATTA 4333
||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1061 TACCAGGTAGTTTAGTTGATTCTCCTTGGCAAGCAATGGCTAGTGTTGCTAGTTGTATTA 1120
Query 4334 TGTCCGGATCTGCAGATGAGCAACTTAGTTTATTCAGTCCCGGGGTTTTTGAAACGGTTT 4393
||||||| |||||||| ||||||| |||||| ||||||||| |||||| ||| ||||||
Sbjct 1121 TGTCCGGTTCTGCAGAGGAGCAACAGAGTTTAATCAGTCCCGAGGTTTTCGAAGCGGTTT 1180
Query 4394 CCAATGCCCTTCACAAGGCTGGTGACCAAGGTCTAAGTACTGAAGAAGTCCACTGTCTTA 4453
||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||
Sbjct 1181 CCAATGCCCTTCACAAGGCTGGTGACCAAGGTCTAAGCATTGAAGAAGTCCACTTTCTTA 1240
Query 4454 TTAATATTCCAAGCCAAGAAACTTGTGACTGCATTGTAGAGGTACTTCAAACATTTGGAG 4513
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1241 TTAATATTCCAAGCCAAGAAACTTGTGACTGCATTGTAGAAGTACTTCAAACATTTGGAG 1300
Query 4514 TAGCTTTAAAGGTAAATGGCTATGATAATTTCCGTCTTGTCCAATCGCTCTACCGATCAA 4573
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1301 TAGCTTTGAAGGTAAATGGCTATGATAATTTCCGTCTTGTCCATTCGCTCTACCGATCAA 1360
Query 4574 AGTACTTCTTGACATTGGAGGATGGAGGAACTACCAAAAATGGTCAACAGTCTCTACCAG 4633
|||||||||||||||||| |||||| ||||||||| |||||||||||||||||| |||||
Sbjct 1361 AGTACTTCTTGACATTGGCGGATGGTGGAACTACCCAAAATGGTCAACAGTCTCAACCAG 1420
Query 4634 TAAACTACCTAGAGAGGGCTTTGGAGGAACATACGTCAAAAGATGCTGTCGCCAGCGGGT 4693
|||||| |||| | |||||||||||||||| |||||| |||| |||| |||||| |
Sbjct 1421 CGAACTACGTAGAAAAAGCTTTGGAGGAACATAGGTCAAACGATGTTGTCACCAGCGACT 1480
Query 4694 ACAGTACTTCACAAGAAAAGCGTGAGCGTGTCGCTGTGAACAACGTTCACAAGGTTACAA 4753
||||||||||| |||| |||| | | ||| ||| ||||| |||||||||||| || |
Sbjct 1481 ACAGTACTTCAAAAGACAAGCAAGTTCATGTTTCTGAGAACAGCGTTCACAAGGTCACGA 1540
Query 4754 TTCTTAACATTCCCGAAACGGCACAAACAAGCGATTTGCACGAAGCATCTATCAAATCTC 4813
||||||||||||| |||| ||| ||||||||| |||||| || | ||||| |||| |||
Sbjct 1541 TTCTTAACATTCCTGAAATGGCTGAAACAAGCGGTTTGCAAGAGGAATCTACCAAAGCTC 1600
Query 4814 CATCTGTAACTTTTGGACCGGGTATCGAAAGTGAAACAAAGGAATCAACTTCTGAGAATT 4873
||||||| ||||||||| || | |||||| | ||||| |||||||||||||||| ||| |
Sbjct 1601 CATCTGTTACTTTTGGAACGAGCATCGAAGGCGAAACGAAGGAATCAACTTCTGTGAAGT 1660
Query 4874 CGCTACCTATGGCTATATTTCCATGGATAAACGCAGATGGATCAGTAAATAAAGTTGTCT 4933
| | |||||| || || |||||||||||||||||||||||||||||||||||||| |
Sbjct 1661 CACAACCTAT----AT-TT-CCATGGATAAACGCAGATGGATCAGTAAATAAAGTTGTAT 1714
Query 4934 TCGATGGACTAATTCGCCGCTTTCTTGGTACCGTGATGCAAAATCCCGGTATACCAGAGG 4993
||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1715 TCGATGGACTAGTTCGTCGCGTTCTTGGTACCGTGATGCAAAATCCCGGTATACCAGAGG 1774
Query 4994 ACGAAATCATAAACCAAATGGACGTACTAAATCCTCAGAGCTGTAGAAAGCTTATCGAGT 5053
| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 1775 AGGAAATCATAAACCAAATGGACGTACTAAATCCTCAGAGCTGTAGAAAGCTTCTGGAGT 1834
Query 5054 TGATGACACTAGACGGGTATGTGAAAGTGAGGGAAATGGTGCAAACCAAATTCACCGGTC 5113
||||||||||||| ||||| ||||||| ||||||||||||||||||||||| | |||||
Sbjct 1835 TGATGACACTAGATGGGTACATGAAAGTAAGGGAAATGGTGCAAACCAAATTTAGCGGTC 1894
Query 5114 CTCCGTCTCTGTTAGCCGGTCTTCTATTTACCGGTCACAGAAAACCGGAGCTTATCAGCC 5173
|||||||| ||||| |||||||||| ||||||||||| |||||| |||| ||||||||||
Sbjct 1895 CTCCGTCTTTGTTAACCGGTCTTCTCTTTACCGGTCATAGAAAAACGGAACTTATCAGCC 1954
Query 5174 GCAAACACTTCTTTGCCAACTCCAAGGGACTCTTTGCCTTGTAA 5217
| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1955 GGAAACACTTCTTTGCCAACTCCAAGGGACTCTTTGCATTGTAA 1998
> AT1G17450.2 | Symbols: | B-block binding subunit of TFIIIC |
chr1:5988280-5996785 REVERSE LENGTH=5926
Length=5926
Score = 2248 bits (1217), Expect = 0.0
Identities = 1619/1814 (89%), Gaps = 23/1814 (1%)
Strand=Plus/Plus
Query 3414 ACCTGCAATTCACTCAGAGGACATTCAAACTTTTTCTATGGATCAAGTTAAAGATACATC 3473
|||||| || ||||||||||||||||||| | | ||| ||||||||||||||||||||||
Sbjct 3827 ACCTGCGATCCACTCAGAGGACATTCAAAATGTGTCTGTGGATCAAGTTAAAGATACATC 3886
Query 3474 TCGACGAGCTGGACATTATCGTCTTCATCAAATTTTTAAGCATGTAGATGAAAAGGAC-A 3532
||||||| |||| ||||||||||||||||||| | | | || | |||||||||||||| |
Sbjct 3887 TCGACGATCTGGTCATTATCGTCTTCATCAAACTGTCAGGCCTTTAGATGAAAAGGACAA 3946
Query 3533 CTGGTAGTGTACAAGTGCAGAAATCTCTGGTAGTATCTACTGCTGTAGAACTGTTGAAGC 3592
| | |||| ||||||| | ||||||||||| ||| |||||||||| ||||||||| ||||
Sbjct 3947 C-GATAGTATACAAGTACGGAAATCTCTGGCAGTTTCTACTGCTGCAGAACTGTTAAAGC 4005
Query 3593 TTGTCTTTCTAAGCATGCCTACTGCACCTGGTATGCCAAATTTGTTGGAAGATACCTTAC 3652
|||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 4006 TTGTCTTTCTGAGCATGCCTACTGCACCTGGTATGCCAAATTTGCTGGAAGATACCTTAC 4065
Query 3653 GACGATATTCCGAGGGTGACCTCTTCACCGCCTATAGCTACCTCCGAGACAGAAAGTTCC 3712
|||| ||||| ||| | ||||||||||| |||||||||||||||||||||| ||| ||||
Sbjct 4066 GACGTTATTCAGAGCGAGACCTCTTCACAGCCTATAGCTACCTCCGAGACAAAAAATTCC 4125
Query 3713 TGGTTGGTGGAAGTGGTGGACAACCATTTGTGCTTTCTCAAAACTTTTTGCATAGTATTT 3772
|||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||
Sbjct 4126 TGGTTGGTGGAAGTGGTGGACAGCCATTTGTGCTTTCTCAAAACTTCTTGCACAGTATTT 4185
Query 3773 CAAAGTCACCATTCCCGGTTAATACTGGGAAAAGAGCTGCCAAGTTCTCAAGTTGGCTTC 3832
||||||| |||||||| ||||||||||||| |||||| ||||||||||| |||||||||
Sbjct 4186 CAAAGTCTCCATTCCCAGTTAATACTGGGACAAGAGCAGCCAAGTTCTCCAGTTGGCTTT 4245
Query 3833 TCGAACACGAAAGAGACCTTATGGCTGGGGGAGTCACTCTTACTTCAGATTTACAATGTG 3892
||||||| ||||||||||||||||||||||| |||||||||||||| ||||| |||||||
Sbjct 4246 TCGAACATGAAAGAGACCTTATGGCTGGGGGTGTCACTCTTACTTCGGATTTGCAATGTG 4305
Query 3893 GTGATGTTTTAAATTTCTTTTCATTGGTTGCTTCTGGTGAACTCTCTATATCTGTATCCT 3952
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 4306 GTGATATTTTAAATTTCTTTTCATTGGTTTCTTCTGGTGAACTCTCTATATCTGTATCCT 4365
Query 3953 TACCTGAAGAAGGTGTTGGAGAGCCTGAACATCGAAGAGGTTTAAAACGTAAAGCTGATG 4012
| ||||||||||||||||||||||||| | ||||||||||||| ||||||| ||||||||
Sbjct 4366 TGCCTGAAGAAGGTGTTGGAGAGCCTGGAGATCGAAGAGGTTTGAAACGTAGAGCTGATG 4425
Query 4013 ACGTAGAAGAATCTGAAACTGATAGTGCTAAGAAATTTAAGCTATTAGGCGAAGGTGAAA 4072
|| |||||||||||||| |||| ||| |||||||||| |||||| |||||||||||||||
Sbjct 4426 ACATAGAAGAATCTGAAGCTGAGAGTTCTAAGAAATTGAAGCTACTAGGCGAAGGTGAAA 4485
Query 4073 GCAACGTCCGAAAGGAAAAAGGTTTCCCTGGTATAGCAGTATCTGTTCGTCGTGTAAATC 4132
|||| ||||||||||||| |||||||||||||||||||||||||||||||||| || |
Sbjct 4486 TCAACTTCCGAAAGGAAAAGGGTTTCCCTGGTATAGCAGTATCTGTTCGTCGTGCAACTA 4545
Query 4133 TACCAATAGCGAACGCAGTAGAGTTGTTTAAGGATGATGACTCTTGTTCTGGTGAACTTC 4192
|||||| ||| || ||| |||||||||||||||||||||||||| | |||||||| |||
Sbjct 4546 TACCAACAGCTAATGCAATAGAGTTGTTTAAGGATGATGACTCTCGCACTGGTGAATTTC 4605
Query 4193 ATTTCAAGTCGGGAGAAACAAATAATCGCTGTGGTTCTGATAATATGAAAGAACTATTCA 4252
|||| |||| ||||||| | |||| | |||||| ||||||| | ||||||||||| ||||
Sbjct 4606 ATTTGAAGTGGGGAGAAGCGAATAGTGGCTGTGATTCTGATGACATGAAAGAACTTTTCA 4665
Query 4253 ACTCTACTGATGCTACTGTGATACCAGGTAGTTTAGGTGATTCTCCTTGGCAAGCAATGG 4312
||||||| ||| ||||||| |||||| | ||| ||||||||||||| |||||||| ||||
Sbjct 4666 ACTCTACAGATTCTACTGTCATACCAAGCAGTCTAGGTGATTCTCCCTGGCAAGCGATGG 4725
Query 4313 CCAGTGTTGCTAGTTGTATTATGTCCGGATCTGCAGATGAGCAACTTAGTTTATTCAGTC 4372
||||| || ||||| | |||||||||| ||| |||||||| || |||||||||||||||
Sbjct 4726 CCAGTTTTACTAGTAGCATTATGTCCGAATCAACAGATGAGGAAGTTAGTTTATTCAGTC 4785
Query 4373 CCGGGGTTTTTGAAACGGTTTCCAATGCCCTTCACAAGGCTGGTGACCAAGGTCTAAGTA 4432
|| ||||||||||||| ||||||||||||||||| |||||||||||||||||||| || |
Sbjct 4786 CCAGGGTTTTTGAAACCGTTTCCAATGCCCTTCAGAAGGCTGGTGACCAAGGTCTGAGCA 4845
Query 4433 CTGAAGAAGTCCACTGTCTTATTAATATTCCAAGCCAAGAAACTTGTGACTGCATTGTAG 4492
||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||
Sbjct 4846 TTGAAGAAGTCCACAGTCTTATTGATATCCCAAGCCAAGAAACTTGTGACTGCATTGTAG 4905
Query 4493 AGGTACTTCAAACATTTGGAGTAGCTTTAAAGGTAAATGGCTATGATAATTTCCGTCTTG 4552
| ||||||||||||||||| |||||||| ||||||||||||||| ||||||||||| |||
Sbjct 4906 ATGTACTTCAAACATTTGGGGTAGCTTTGAAGGTAAATGGCTATAATAATTTCCGTGTTG 4965
Query 4553 TCCAATCGC-TCTACCGATCAAAGTACTTCTTGACATTGGAGGATGGA-GGAAC-TACCA 4609
|||| || | |||||||||||||||||||||||||||||||||| || ||||| | |||
Sbjct 4966 TCCATTC-CTTCTACCGATCAAAGTACTTCTTGACATTGGAGGA-AGATGGAACTTCCCA 5023
Query 4610 AAAATGGTCAACAGTCTCTACCAGTAAACTACCTAGAGAGGGCT-TTGGAGGAACATACG 4668
|||| ||||||||||||||||||| |||||||||||||| ||| |||| |||||||| |
Sbjct 5024 AAAA-AGTCAACAGTCTCTACCAGTGAACTACCTAGAGAGAGCTGTTGG-GGAACATAGG 5081
Query 4669 TCAAAAGATGCT-GTCGCCAGCGGGTACAGTACTTCACAAGAAAAGCGTGAGCGTGTCGC 4727
|| |||||| | | || ||| | |||||||||||||| || | ||| |||| ||||||
Sbjct 5082 TCCAAAGAT-ATCATTGCTAGCAGCTACAGTACTTCACAGGACATGCGAGAGCATGTCGC 5140
Query 4728 TGTGAACAACGTTCACAAGGTTACAATTCTTAACATTCCCGAAACGGCACAAACAAGCGA 4787
|| ||| | ||||||||||||||||||||||||| |||| |||||||| ||||| ||||
Sbjct 5141 TGGGAATAGCGTTCACAAGGTTACAATTCTTAACCTTCCTGAAACGGCTCAAACGAGCGG 5200
Query 4788 TTTGCACGAAGCATCTATCAAATCTCCATCTGTAACTTTTGGACCGGGTATCGAAAGTGA 4847
|||||| ||||||||||||||| |||||||||| ||||||||| ||||||| ||| ||||
Sbjct 5201 TTTGCATGAAGCATCTATCAAAGCTCCATCTGTTACTTTTGGAACGGGTATTGAAGGTGA 5260
Query 4848 AACAAAGGAATCAACTTCTGAGAATTCGCTACCTATGGCTATATTTCCATGGATAAACGC 4907
||||||||||||||||||||| || | | |||| || |||||| ||||||| |||||||
Sbjct 5261 AACAAAGGAATCAACTTCTGAAAAGT--C-ACCTGTGCCTATATATCCATGGGTAAACGC 5317
Query 4908 AGATGGATCAGTAAATAAAGTTGTCTTCGATGGACTAATTCGCCGCT-TTCTTGGTACCG 4966
|||||| ||| |||||||| ||||||| ||||||||| ||||||| | ||||||||||||
Sbjct 5318 AGATGGGTCAATAAATAAAATTGTCTTTGATGGACTAGTTCGCCG-TGTTCTTGGTACCG 5376
Query 4967 TGATGCAAAATCCCGGTATACCAGAGGACGAAATCATAAACCAAATGGACGTACTAAATC 5026
||||||||||||||||||||||||||||||| || ||||||| ||||||| |||||||||
Sbjct 5377 TGATGCAAAATCCCGGTATACCAGAGGACGAGATAATAAACCTAATGGACATACTAAATC 5436
Query 5027 CTCAGAGCTGTAGAAAGCTTATCGAGTTGATGACACTAGACGGGTATGTGAAAGTGAGGG 5086
|||||||||||||||||||| | |||||||||||||| ||||| ||| ||||||||||||
Sbjct 5437 CTCAGAGCTGTAGAAAGCTTCTGGAGTTGATGACACTCGACGGCTATATGAAAGTGAGGG 5496
Query 5087 AAATGGTGCAAACCAAATTCACCGGTCCTCCGTCTCTGTTAGCCGGTCTTC-TATTTACC 5145
||||||||||||||||||||||||||||||||||||||||||||||||| | | | ||
Sbjct 5497 AAATGGTGCAAACCAAATTCACCGGTCCTCCGTCTCTGTTAGCCGGTCT-CGTCTCAACA 5555
Query 5146 GGTCAC-AGAAAACCGGAGCTTAT-CAGCCGCAAACACTTCTTTGCCAACTCCAAGGGAC 5203
|||| | ||||||||||| ||||| | ||||||||||||| ||||| |||||||||||||
Sbjct 5556 GGTC-CTAGAAAACCGGAACTTATTC-GCCGCAAACACTTGTTTGCAAACTCCAAGGGAC 5613
Query 5204 TCTTTGCCTTGTAA 5217
||||||||||||||
Sbjct 5614 TCTTTGCCTTGTAA 5627
Score = 2025 bits (1096), Expect = 0.0
Identities = 1631/1881 (87%), Gaps = 70/1881 (4%)
Strand=Plus/Plus
Query 1440 ACCGAA-CTCGGCTAAATCAAAAGTGCAGCAACCTCATG-C---TACTATCGAAAACTCT 1494
|||||| | | |||||| |||| ||||| |||||||| | | |||| | |||||||||
Sbjct 1697 ACCGAAGC-CAGCTAAACCAAAGGTGCACCAACCTCA-GCCGATTACTGTTGAAAACTCT 1754
Query 1495 CGGAGAGAGCAGAGAATACTTGAGCGCTTAAATGAGGAGAAGTTTGTTTTGAGAGCGGAG 1554
|| ||||||| ||||||||||||||||||||||||||||||||||||| | ||||| |||
Sbjct 1755 CGAAGAGAGCGGAGAATACTTGAGCGCTTAAATGAGGAGAAGTTTGTTGTAAGAGCCGAG 1814
Query 1555 TTCCATAAATGGCTTCTAAGTTTTGAGAAAGACAGGAGC-CCTAAGGTTGATAGGAAAAC 1613
| |||||||||||||| ||| ||||||| ||||||||| || || || |||||||||||
Sbjct 1815 CTACATAAATGGCTTCTCAGTCTTGAGAAGGACAGGAGCTCC-AAAGTGGATAGGAAAAC 1873
Query 1614 CATTTACAGAATTCTAAACAAGCTTCAAGAAGAAGGGCTCTGCAAATGCGTTG-GTATTC 1672
|||| ||||||||||||| | ||||||||||||||| |||||||| ||| || |||
Sbjct 1874 CATTGACAGAATTCTAAATAGGCTTCAAGAAGAAGGACTCTGCAATTGC-ATGAACATTA 1932
Query 1673 GTGTTCCAAATGTAAATGATTGTGGTCGTAGTCGTTGCTTTGTGATAGTTTTGCATCCAT 1732
|||| |||||||| | | |||||||||| | |||| ||| |||| ||||||| |||||||
Sbjct 1933 GTGTCCCAAATGTTACTAATTGTGGTCGCAATCGTAGCTCTGTGGTAGTTTTTCATCCAT 1992
Query 1733 CTGTTCAAGGATTGAGTCGAGACGTAGGAAATGAAATTCATGAAAGGATTAGGTCTTTTG 1792
|||||||| | |||| ||||||| ||| |||||||||||| ||||||||||||||||
Sbjct 1993 CTGTTCAAAGTTTGACTCGAGACATAGTTGGTGAAATTCATGATAGGATTAGGTCTTTTG 2052
Query 1793 AATTAGAATTCCGTGGCCAGAGA-TTATCGAAGAGGAAAAGCAACGAGAC-AATTCCAGT 1850
|| | | | |||||||||||| | ||||| |||||||||||||||||| | ||||||| |
Sbjct 2053 AACTGGGACTCCGTGGCCAGA-ACTTATCAAAGAGGAAAAGCAACGAG-CTAATTCCAAT 2110
Query 1851 ATTGAATGTCGTTCAGAGAGGT-AGAACTAATGCGGATTTAGATGCGCAAGCTAGCAAAT 1909
|||||||| | ||||||||||| | ||| |||| |||||| ||||||| ||||||||||
Sbjct 2111 ATTGAATGACATTCAGAGAGGTCA-AACGAATGTGGATTTGGATGCGCGTGCTAGCAAAT 2169
Query 1910 CAGGAGTTATGCGAGTGAAAGGGAGTGTTTTTGCAAAGATGGTTCGTGTGAAGCTTC-TA 1968
|||||| ||||||| || ||| ||| |||||||||||||||||||||||| || ||
Sbjct 2170 CAGGAGCCATGCGAGCCAATGGGTTTGTGCTTGCAAAGATGGTTCGTGTGAAGC-TCTTA 2228
Query 1969 CACTGTTTCCTTTGGGACTATTATAGTAGTTCTTTGCCTGGCTGGGACAATGCCTTTTCT 2028
|| ||||||||||||||||||| | |||||||||| || |||||||||||||||||||
Sbjct 2229 CATTGTTTCCTTTGGGACTATT-T--TAGTTCTTTGTCTAGCTGGGACAATGCCTTTTCG 2285
Query 2029 TCTATACATGATCATAAATCTGAGAACTTGTTTTCACTTAAAGATGCTTTTAGAGCCATG 2088
|||||||||||||| |||||||| || |||||| ||||| |||||||||||| |||||||
Sbjct 2286 TCTATACATGATCAGAAATCTGACAATTTGTTTGCACTTGAAGATGCTTTTAAAGCCATG 2345
Query 2089 CCACTCCAACTATTTGTACAAGTTGTTGGATCTACTCAGAAAGCTGATGATATAATGAAG 2148
|||||| |||| ||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2346 CCACTCGAACTGTTTTTACAAGTTGTTGGATCTACTCAGAAAGCTGATGATATGATGAAG 2405
Query 2149 AAATGCAAACAGGTTATGCGTCTTTCTGAGATTTCTAGCGACA-AGTATAAGCTTCTAAT 2207
||||| |||||||||||||||||||||||| || || | || | ||||||||||||||||
Sbjct 2406 AAATGTAAACAGGTTATGCGTCTTTCTGAGCTTCCTGGTGA-AGAGTATAAGCTTCTAAT 2464
Query 2208 GGATACTCGTGCCATTGGG-GTATTATCGATGCTTATTGATATTTTACGCCGGTTAAAGT 2266
||| |||| ||| | |||| | ||||||||||||||||||||||||||| || || ||||
Sbjct 2465 GGACACTCTTGCAACTGGGAG-ATTATCGATGCTTATTGATATTTTACGTCGCTTGAAGT 2523
Query 2267 TGATTCAGATGGTAAGTGA-TAGACTCAGACGTGACGAGATTGAGGAGAAGTATGCTAAT 2325
| ||||||||||||||| | |||||||||||| || || |||||||||||||||||||||
Sbjct 2524 TAATTCAGATGGTAAGT-AGTAGACTCAGACGCGATGAAATTGAGGAGAAGTATGCTAAT 2582
Query 2326 TTAACACATGCAGTGGAGCTTAAACCTTATATAGAGGAACCTTTGTTTGTTGCTGCTAAA 2385
||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||| |
Sbjct 2583 CTAACACATGCAATGGAGCTTAAGCCTTATATAGAGGAACCTGTGTTTGTTGCTGCTACA 2642
Query 2386 TCCGATGTCACGTCTCTTGATTTTTGTCCGCGTATTCGGCATGACTTTATTCTATCAAAT 2445
||| |||| | ||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct 2643 TCCAATGTTATGTCTCTTGATTTTCGTCCACGTATTCGGCATGACTTTATTCTATCAAAT 2702
Query 2446 AGAGATGCTGTTGATGAATATTGGCTTACTCTAGAATATTGCTATGCTGCTGCTGATCAC 2505
|||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||
Sbjct 2703 AGAGATGCTGTTGATGAATATTGGCTAACTTTAGAATATTGCTATGCTGCTGCCGATCAC 2762
Query 2506 AGAGCTGCTAAGCAAGCATTTCCGGGATCTGTT-TCTCAAGAGGTTTTTGGTGTCCGCTC 2564
||||||||||||| ||||||||||||||||||| | ||||||||||||| || |||||||
Sbjct 2763 AGAGCTGCTAAGCTAGCATTTCCGGGATCTGTTGT-TCAAGAGGTTTTTCGTTTCCGCTC 2821
Query 2565 TTGGGCCTCAGATAATGTCATGACAGCGGAACAGCGTGCGAAGCTCTTACAGTGTATTGC 2624
||||||||||||| |||||||||| ||||||||||||| ||||||||| || | |||||
Sbjct 2822 TTGGGCCTCAGATCGTGTCATGACAACGGAACAGCGTGCTAAGCTCTTAAAGCGCATTGC 2881
Query 2625 AATCGATGAAAAGGAAAAAATCTCATTCAAAGAGTGTGAGAAGATTTCTAAGGATCTGAA 2684
||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 2882 AATCGATGAGAAGGAAAAGCTCTCATTCAAAGAGTGTGAGAAGATTGCTAAGGATCTGAA 2941
Query 2685 CCTGACCATAGAGCAGGTTATGCATG-CTTATTACGCGAAGCATGGAAGACGCGTGGAAT 2743
||||||| |||||||||||||||||| || || | ||||||||||||||||||||| |||
Sbjct 2942 CCTGACCTTAGAGCAGGTTATGCATGTCT-ATCATGCGAAGCATGGAAGACGCGTGAAAT 3000
Query 2744 C-AAA--A-----T---CA---A---A-AGATAATAG-TC--CTTCATCTTCCAGGAAAA 2782
| ||| | | || | | ||||||||| || |||||||||| ||||||
Sbjct 3001 CCAAATCAAAAGATAAACATTTAGCTATAGATAATAGCTCTTCTTCATCTTCTGGGAAAA 3060
Query 2783 GAAAAAGAGCATCTCTTGTAAAGACTAGAGGAGAAGGTGTCAGATCCATAACAGTAGATG 2842
||||||||| | |||| |||||||||| ||||||||||||||||||||||| |||||| |
Sbjct 3061 GAAAAAGAGGAACTCTCGTAAAGACTACAGGAGAAGGTGTCAGATCCATAATAGTAGACG 3120
Query 2843 GACAGAAGGTTCTAAATTCTGAAGCCATTGATGCCTCAACTAGTGAGAATTTTC-AAGAT 2901
|| | |||||||| ||||| || |||||||||||||||| ||||||||| |||| || ||
Sbjct 3121 GAGAAAAGGTTCTGAATTCCGATGCCATTGATGCCTCAAATAGTGAGAAGTTTCTAA-AT 3179
Query 2902 TCATTACAAGATG-ACCAA-ACCCCCATTCCAATGCATCGACAAGAAAATGCAGAGATAA 2959
|||||| |||| | | || | | || ||| | | |||||||||| |||||||||
Sbjct 3180 TCATTAGAAGA-GCATCAGGAGC---AT---AAT-C-T--ACAAGAAAATTCAGAGATAA 3228
Query 2960 GCGATTTTACTGAAGATGAAGGTCAGTGTTGTTCCATCATCAACCGGCATGCAAGTTCAA 3019
| ||| |||||||||||||||| ||||| | ||| || ||||||| | | ||||||||||
Sbjct 3229 GGGATCTTACTGAAGATGAAGGCCAGTGCTCTTCTATTATCAACCAGTACGCAAGTTCAA 3288
Query 3020 AGACTAGATCAACTCCTTTACAAAGATTTTCGTGGACAGATGAGGCAGACAGGAAATTGT 3079
|||| | ||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct 3289 AGACCACATCAACTCCTTCACAAAGATTTTCGTGGACAGATGAGGCAGACAGGAAACTGT 3348
Query 3080 TGTCTAAATATGTTAGACACCGTGCAGCTCTTGGGGCAAAATTTCATGGAGTAAAT-TGG 3138
|| | ||||||||||||| ||||||||||||||||| |||||||||||||| | | |||
Sbjct 3349 TGAGTCAATATGTTAGACATCGTGCAGCTCTTGGGGCGAAATTTCATGGAGTGA-TGTGG 3407
Query 3139 GCTTCAGTTCCAGAACTACCTGCACCTCCTTTACCTTGCAAGCGACGGATTCAAACATTG 3198
||||||||||||||||| ||||| |||||||| |||||||||||||| |||||| ||||
Sbjct 3408 GCTTCAGTTCCAGAACTGCCTGCCCCTCCTTTGGCTTGCAAGCGACGGGTTCAAATATTG 3467
Query 3199 ATGAAGAATGATAAAGTTCGGAAGGCGGTCATGAGGCTTTGCAATCTGCTCAGTGAGCGT 3258
||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct 3468 ATGAAGAATGATAAATTTCGGAAGGCGATCATGAGTCTTTGCAATCTGCTCAGTGAGCGT 3527
Query 3259 TATGCAAGACATCTAAAGACG 3279
|||||||||||||| |||||
Sbjct 3528 TATGCAAGACATCTGGAGACG 3548
Score = 1362 bits (737), Expect = 0.0
Identities = 1198/1409 (85%), Gaps = 77/1409 (5%)
Strand=Plus/Plus
Query 1 ATGGATTCGATTATATGCACGGCACTGGATGAAATCTGTTCTCAGGGAAACACAGGGATC 60
|||||||||||| ||||||| |||||||| |||||||||| ||| ||||| |||||||||
Sbjct 93 ATGGATTCGATTGTATGCACAGCACTGGAGGAAATCTGTTGTCAAGGAAATACAGGGATC 152
Query 61 GCTCTCGTTTCTTTATGGTC-A--C-GTCT-CT-CTACTCTTTCTTCTTCCGTCAAGGTT 114
| ||||||||| | ||||| | | ||| || || |||||||| |||||||||||| |
Sbjct 153 CCACTCGTTTCTCTCTGGTCAAGGCTCTCTCCTCCTCCTCTTTCTCCTTCCGTCAAGGCT 212
Query 115 CATGTCTGGAGAAATCTTCTC-ACGATCCCTCAGCTCCAATTCAAGACTAAGAACACTGT 173
||||||||||||||||||||| || ||||||||||||| |||||| | || ||||||||
Sbjct 213 CATGTCTGGAGAAATCTTCTCGCCG-TCCCTCAGCTCCAGTTCAAGGCGAAAAACACTGT 271
Query 174 CTACGGATCATCAGATACTTCGATTCAACAGCTTGACGATGCACTAAGACTCGATTTAAG 233
|||| | |||| ||| |||||||||||||||| || || ||||||||||||||||| ||
Sbjct 272 GTACGAACCATCTGATGCTTCGATTCAACAGCTGGAAGAGGCACTAAGACTCGATTTGAG 331
Query 234 GATCGTCGCTAATGAGAA-CTTACGAGCTAACTTCGTTGGCTTGTACGATACTCAGTCGA 292
|||| |||| |||||||| | | |||| |||||||||||||||||||||| ||||||| |
Sbjct 332 GATCTTCGCGAATGAGAAGC-TCCGAGGTAACTTCGTTGGCTTGTACGATGCTCAGTCCA 390
Query 293 ATAACACTACTATTCCCGCGATTCAGCGACGTGTTCTTGAAC-GTTTGGCTATTGCTAGA 351
||||||| |||||| |||| |||||||| || ||||| || | | || ||| ||||| ||
Sbjct 391 ATAACACGACTATTTCCGCTATTCAGCGTCGCGTTCTCGAGCGGCTT-GCTGTTGCTCGA 449
Query 352 GACAATGGAGATGCACAAAATCTGCTTGCTAAAGAGTTTGGTATCGATGGAAGGAACTTC 411
| |||||||| |||||||||||||||||||||||||||||||||||| || || ||||||
Sbjct 450 GCCAATGGAGTTGCACAAAATCTGCTTGCTAAAGAGTTTGGTATCGAAGGTAGAAACTTC 509
Query 412 TTCTATAGTGTGAAGCAGCTTGAATCTCGAGGTTTGA-TTGTTAGGCAACCAGCAATTGT 470
||||||| ||||||||| ||||| ||||||||||| | |||||| |||||||| || ||
Sbjct 510 TTCTATATTGTGAAGCACCTTGAGTCTCGAGGTTT-AGTTGTTAAACAACCAGCGATAGT 568
Query 471 GAGAACTAAA-GAA---G-T--T------GATTCCAAAACGACTTCATGTATTACCACCA 517
|||||| ||| ||| | | | ||||||||||| || ||||| |||| |||||
Sbjct 569 GAGAAC-AAAGGAAGTTGATGGTGAAGGGGATTCCAAAACCACCTCATGCATTAGCACCA 627
Query 518 ACATGATATACTTAACTCGTTACGCCAAGCCTATGGGTTCGCAGCAGAGGTTTGAGATTT 577
| |||||||| |||| |||||||||||||||| ||||||| |||||||| ||||||||||
Sbjct 628 ATATGATATATTTAAGTCGTTACGCCAAGCCTTTGGGTTCCCAGCAGAGATTTGAGATTT 687
Query 578 GTAAAGAGGACTCTATGTCT-GAGCATGAGGCTACTGCCGCCGGAGATAG-TT----T-- 629
| |||||||||||| | | | ||||| ||||||||| ||||||||||||| || |
Sbjct 688 GCAAAGAGGACTCTTTAT-TGGAGCAAGAGGCTACTCCCGCCGGAGATAGTTTACAATCA 746
Query 630 ----G----AAAGATGATACGCTTATTAACGATTTTTTACCAGCAATGCAGGCAGTTTGT 681
| ||||| |||||||| ||||| |||||| ||||||||||||||||| |||||
Sbjct 747 GAAAGTACAAAAGAGGATACGCTCATTAAAGATTTTCTACCAGCAATGCAGGCAATTTGT 806
Query 682 GATAAGCTCGAAGAAGCTAACGAGAAAGTTTTAGTTGTCTCGGATATTAAGCAAGACCTT 741
|||||||| |||||| |||| ||||| ||| |||| |||||||| ||||||||||||||
Sbjct 807 GATAAGCTTGAAGAAACTAATGAGAAGGTTCTAGTCGTCTCGGACATTAAGCAAGACCTC 866
Query 742 GGTTATATGGGATCACATAT-AAGGCATAGAGCTTGGAGAAGTGTTTTTCGCCGGTTGAT 800
|||||| ||||||||||| | |||||||||||||||||||||||||| |||||||||||
Sbjct 867 GGTTATCTGGGATCACAT-TCAAGGCATAGAGCTTGGAGAAGTGTTTGTCGCCGGTTGAC 925
Query 801 AGACTCTCATGTAGTAGAGGAGTTTGATGCTATGGTGAATAATAAGGTTGAAAGATGTCT 860
||| ||||||||||||||||||||||||||| ||||||| |||||||||||| |||| ||
Sbjct 926 AGATTCTCATGTAGTAGAGGAGTTTGATGCTGTGGTGAACAATAAGGTTGAACGATGCCT 985
Query 861 CCGTTTGTTAAAAAGATTTTCAGCAGAAGATTTTAACTATTCTAGGAAAAAGCAACTCCT 920
||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||
Sbjct 986 CCGTTTGTTAAAAAGATTTTCAGCAAAAGATTTTAACTACTCTGGGAAAAAGCAACTCCT 1045
Query 921 AAAATTCGGAAGGAGTATTCAAAAAACAGAACAGACTTTGGAGCTTCCAATAGATAATCA 980
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1046 AAAATTCGGAAGGAGTATTCAAAAAACAGAACAAACTTTGGAGCTTCCAATAGATAATCA 1105
Query 981 AATTTATGATATGGTTGATGCTGAAGGTTCTAAAGGCTTGGCTGTTATGGAGGTATGCGA 1040
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||
Sbjct 1106 AATTTATGATATGGTTGATGCTGAAGGATCTAAAGGCTTGGCTGTGATGGAGGTATGTGA 1165
Query 1041 AAGACTTGGGATTGATAAGAAGAAGATCTA-TCCTCGGCTTTGTAGTATTTGTTCAAGAG 1099
||||||||| ||||| |||||||||| ||| || |||||||| ||||||||||| || ||
Sbjct 1166 AAGACTTGGAATTGACAAGAAGAAGAGCTACTC-TCGGCTTTATAGTATTTGTTTAAAAG 1224
Query 1100 TCGGGATGCATTTACAGGCAGAAAGCCACAAGAAGACTCGAGTATTTCGAGTTTGGACTT 1159
||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct 1225 TCGGGATGCATTTACAGGCAGAAAGTCACAAGAAGACTAGAGTATTTCGAGTTTGGACTT 1284
Query 1160 CTCGTCATACTCGGTCTGA--GT-CT--TC--T-----GATAAAGCTGAAAATATTAGAG 1207
|| || || || |||| || || || || | || |||||||||||| |||
Sbjct 1285 CTGGTAATGCTGGGTCCGAATGTTCTGATCGGTTTCCTGAGAAAGCTGAAAATCGTAGCT 1344
Query 1208 GGGAAAA---T--A---AT----GATTTTAGTACACCTCATGGTACCGGTGGATTGGCTA 1255
||||||| | | || |||||| | |||||||||| ||| ||||||||| ||
Sbjct 1345 GGGAAAACAATGTACCGATTAATGATTTTGGCACACCTCATGATACTGGTGGATTGACTC 1404
Query 1256 AGACCTCTACCGAACACAGTTTTA-AAGTTTCAGATGCTGACATCTA-TACACCTACAAC 1313
||||||| | |||||||||| || || |||| ||||||||| | | ||||||| |||
Sbjct 1405 AGACCTCCATCGAACACAGTATTGCAA-TTTCTGATGCTGACTT-TGCTACACCTGCAAG 1462
Query 1314 GTTAACTGATTCTGAAAGGAATTCAGGAG 1342
||||||||||||||||| ||||||||||
Sbjct 1463 GTTAACTGATTCTGAAAACAATTCAGGAG 1491
Score = 163 bits (88), Expect = 1e-38
Identities = 99/104 (95%), Gaps = 2/104 (2%)
Strand=Plus/Plus
Query 3307 GATGAAGGAAAATGGGATGACTTCAATGAAAAGAGTATAAGTCAAGCCTTTAATAATGTT 3366
||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 3663 GATGAAGAAAAATGGGATGACTTCAATGAAAAGAGTATAAGTCAAGCCTTTAATGATGTT 3722
Query 3367 CTTGAGCTCAAGAAGATGGCTAAACTGCTG-CCCTCTAAACGGA 3409
||||||||||||||||||||||||||| || ||| |||||||||
Sbjct 3723 CTTGAGCTCAAGAAGATGGCTAAACTGGTGGCCC-CTAAACGGA 3765
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 260366434170
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5