BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg475391 Length=671 Score E Sequences producing significant alignments: (Bits) Value AT1G58420.1 | Symbols: | Uncharacterised conserved protein UCP... 961 0.0 > AT1G58420.1 | Symbols: | Uncharacterised conserved protein UCP031279 | chr1:21707379-21708118 FORWARD LENGTH=740 Length=740 Score = 961 bits (520), Expect = 0.0 Identities = 632/682 (93%), Gaps = 24/682 (4%) Strand=Plus/Plus Query 1 CaaaaaaaaaaaTGGGAAAGAGAGGACAAAAACAGAACAAGTTCTTGAGAATCGTCACCA 60 ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 18 CAAAACAAAAAATGGGAAAGAGAGGACAAAAACAGAACAGGTTCTTGAGAATCGTCACCA 77 Query 61 TGCCTCTAAAAGTTCTATGCAAGGCTCGTGATCTCTACATGAGAAGCATCACAGGTTGCG 120 ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct 78 TGCCTCTTAAAGTTCTATGCAAAGCTCGTGATCTCTACATGAGAAGCATCACAGGTTGTG 137 Query 121 CAGCTCGAACTCACTACTCTTCAGCCGTGGACGCCGCCTCCGTTCCCTTTCCGAGAAGCC 180 |||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||| Sbjct 138 CAGCTCGAACTCACTACTCTTCAGCCGTCGACGCCGCATCCGTTCCATTTCCGAGAAGCC 197 Query 181 GGAGTACTTCCTCCGCCTTCTCCTCCTCTGCCTCTTCTCGGAGAAGATCTTCCGATTTCA 240 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 198 GGAGTACTTCCTCCGCCTTCTCTTCCTCTGCCTCTTCTCGGAGAAGATCTTCGGATTTCA 257 Query 241 CTTTCGATGATGATTATAGCGAGCTGCTTAGAGCTGCTTCCGCTAGAAGTTTGGGTCATA 300 ||||||| |||||||||||||||||||||||||||||||||| ||| ||||| ||||||| Sbjct 258 CTTTCGACGATGATTATAGCGAGCTGCTTAGAGCTGCTTCCGTTAGGAGTTTAGGTCATA 317 Query 301 AGAATGAGATTGACATGATCATACACCAACAGCTACAGCTTCAGCAGCAGCAGCAGCGGC 360 ||||||||||||||||||||||||| ||||||| | | |||||||||||||| |||| Sbjct 318 AGAATGAGATTGACATGATCATACAACAACAGC-A-A----CAGCAGCAGCAGCAACGGC 371 Query 361 AGGAGAATCGCGTTGCGATGGGAGCGGTTGCGGTAGCGGTTAAAGGCGGTTTGCCTAAGA 420 ||||||||||||||||||||||||||| | || |||||||||||||||||||||||| Sbjct 372 AGGAGAATCGCGTTGCGATGGGAGCGG-T----TA-CGGTTAAAGGCGGTTTGCCTAAGA 425 Query 421 GCTCGAGTGTTGGGATGACAATGGCGAGGATTGATGAAGAAGATGAAGAAGAAGGATCTT 480 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 426 GCTCGAGTGTTGGGATGACAATGGCTAGGATTGATGAAGAAGATGAAGAAGAAGGATCTG 485 Query 481 TAAAGAATCAAAAGAAGGGATCTGATTTCTTATATCCTCGTAGCAGATCACATGCTGTTA 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 486 TAAAGAATCAAAAGAAGGGATCTGATTTCTTATATCCTCGTAGCAGATCACATGCTGTTA 545 Query 541 CTATAAGAGGATCTAAGTTTTAATATA--CTA--ACT-AATTGTCAATTT-ATTTTTCTT 594 |||| |||||||| ||||||||||||| ||| | | |||||||| ||| ||||||||| Sbjct 546 CTATTAGAGGATCCAAGTTTTAATATATACTACTAATTAATTGTCAGTTTTATTTTTCTT 605 Query 595 TTGATTT--T--AAAAGAATGTTCTTA-TAAGAACATGGTTATGGAATTATTTTGATGTA 649 ||||||| | |||||||||||| || | | | |||| ||||||||||||||||||||| Sbjct 606 TTGATTTAATTTAAAAGAATGTTCCTAATTATA-CATGTTTATGGAATTATTTTGATGTA 664 Query 650 AAGTTACTGTCATGGATTTATA 671 |||||||||||||||||||||| Sbjct 665 AAGTTACTGTCATGGATTTATA 686 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 32451258962 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5