BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475399
Length=2968
Score E
Sequences producing significant alignments: (Bits) Value
AT1G58350.1 | Symbols: ZW18 | Putative serine esterase family ... 3938 0.0
AT1G09980.1 | Symbols: | Putative serine esterase family prot... 2080 0.0
> AT1G58350.1 | Symbols: ZW18 | Putative serine esterase family
protein | chr1:21662916-21667445 REVERSE LENGTH=3046
Length=3046
Score = 3938 bits (2132), Expect = 0.0
Identities = 2476/2637 (94%), Gaps = 43/2637 (2%)
Strand=Plus/Plus
Query 364 TGAAAAGAACAGAGTCAAAGATTTAGAAAGTGATGTGATTTTTTGGGTTCACATATGTTA 423
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 393 TGAGAAGAACACAGTCAAAGATTTAGAAAGTGATGTGATTTTTTGGGTTCACATATGTTA 452
Query 424 CACCGTCTTAGATGGTTAATTGGATTGAGTAAAAGAAGTAGACAAGCAAAGACGCTTGAT 483
||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||
Sbjct 453 CACCGTCTTAGATGGTTTATTGGATTGAGTAAAAGAAGTAGAGAAGCCAAGACGCTTGAT 512
Query 484 GCTAAACCTTACATAGCCAAGGTTAAGCCAGTACTGATGGTTGACACGGTTCAAGAGATT 543
|| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 513 GCGAAACCTTACATATCCAAGGTTAAGCCAGTACTGATGGTTGACACGGTTCAAGAGATT 572
Query 544 GCGATTTATATCCACCGGTTTCATAACCTTGATCTTTTCCAACAAGGATGGTATCAAATC 603
||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 573 GCGATTTATATTCATAGGTTTCATAACCTTGATCTTTTCCAGCAAGGATGGTATCAAATC 632
Query 604 AAAATCACCATGAGATGGGAGGATGGAGATAACGTAACTCGGGGTATTCCTTCACGAGTC 663
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 633 AAAATCACCATGAGATGGGAGGATGGTGATAACGTAACTCGTGGTATTCCTTCACGAGTC 692
Query 664 GTTCAGTATGAAGCTACTGAATCCGGTTCTAATGACTCGTACGGAGTGTGGAGGATAGTT 723
|| || ||||||||| |||| |||||| |||||||||| || |||||||||| |||||||
Sbjct 693 GTGCAATATGAAGCTCCTGATTCCGGTGCTAATGACTCATATGGAGTGTGGAAGATAGTT 752
Query 724 GATAAAGATAATAGTTTCTTAACACAGCCCTTCCGTATCAAATATGCACGGCAGGATATT 783
||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct 753 GATAAAGATAATAGTTTCTTAACACAGCCTTTCCGTATCAAATATGCAAGGCAGGATATT 812
Query 784 CGTTTGTGTATGATGATCTCATTTACTCTGCCACTGGAACGATATGAGGGATCAGCTACA 843
||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 813 CGTCTGTGTATGATGATCTCATTTACTCTGCCACTGGAACGATATGAGGGGTCAGCTACA 872
Query 844 TCTGCTGCTATATTAAAGTTTGAGCTCATGTATGCTCCTTCTGTAGATAATGCATCAGCG 903
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 873 TCTGCTGCTATATTAAAGTTTGAGCTCATGTATGCTCCCTCTGTAGATAATGCATCAGCG 932
Query 904 AAGCATTTAGATGCTTCTTCTGTTGCAGTTCATGAGTTCCGTATTCCTCCTAAAGCTCTT 963
||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 933 AAGCAATTAGATACTTCTCCTGTTGCAGTTCATGAGTTCCGTATTCCTCCTAAAGCTCTT 992
Query 964 ACAGGCTTGCATTCTTACTGTCCAGTGCATTTTGATACACTTCATGCGGTTCTTGTCGAT 1023
|||||||||||||| ||||||||||||||||||||||||||||| || |||||| | |||
Sbjct 993 ACAGGCTTGCATTCATACTGTCCAGTGCATTTTGATACACTTCACGCAGTTCTTATTGAT 1052
Query 1024 GTGAGTGTCCACATCAGTGTATTGAAATCGGCTGCGTATAAACGACCTGCACGTCTATCA 1083
||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||
Sbjct 1053 GTGAGTGTCCACATCAGTGTATTGAAATCGGCTGCTTACAAACGACCTGCAAGTCTATCA 1112
Query 1084 AGTGGCGTAAGTAACAGTAAAAATGTCAGTGGCAGCAGCGCTCAATCTTTTAAGAAAGCA 1143
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 1113 AGTGGCGTAAGTAACAGTAAAAATGTCAGTGGCAGCAGTGCTCAGTCTTTTAAGAAAGCA 1172
Query 1144 CTTGGTTTGCTTGCTTCTGCTGATAAGAAACTGGTGTCATTTGTCAAAGCATTACTTGGA 1203
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 1173 CTTGGTTTGCTTGCTTCTGCTGACAAGAAACTGGTGTCATTTGTTAAAGCATTACTTGGA 1232
Query 1204 GCTCGTGGTATTTTACTCGAGGAAATGCAAAGACTTAGCAAGGCAGTTGGTCAAACGATA 1263
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 1233 GCTCGTGGTATTTTACTCGAGGAAATGCAAAGACTTAGCAAGGCAGTTGGTCAGACAATA 1292
Query 1264 GACTTGTCTGACTTTGTATCAAACATGAACAATATTCCCTTATCAAACTCAACAATTAAC 1323
||||||||||||||||||||||| ||||||||| ||| ||||| |||||||||| || |
Sbjct 1293 GACTTGTCTGACTTTGTATCAAATATGAACAATGTTCAGTTATCTAACTCAACAAGTACC 1352
Query 1324 GGTTCAGGACAAGGCAAGGAACAAAACAGTCTTGAGAAGTTGAATATCACATTTGATTTA 1383
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 1353 GGTTCAGGACAAGGCAAGGAACAAAACAGTCTTGAGAATTTGAATATTACATTTGATTTA 1412
Query 1384 GCAAGTGATGATTGGCTTCATGAACTCTCGAAGGATCATCTATCCCGTATATTCCACTTA 1443
|||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1413 ACAAGTGATGACTGGCTTCATGAACTCTCGAAAGATCATCTATCCCGTATATTCCACTTA 1472
Query 1444 CTGGGCACCCAGCTGCATCATCTTTGGAACACATTTCTGGGATTTCACCGGGATAATCAC 1503
||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 1473 CTGGGCACCCAACTGCATTATCTTTGGAACACACTTCTGGGATTTCACCGGGATAATCAC 1532
Query 1504 ACAAAAATACTGGAATATCTTTGTGATATCTGGACTAAAGATCGAAGAGCTGAATGGTCA 1563
||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct 1533 ACAAAAATACTTGAATATCTTCGTGATATCTGGACTAAAGATCGGAGAGCTGAATGGTCA 1592
Query 1564 ATATGGATGGTGTACTCTAAGGTTGAAATGCCCCATCATTTTATAAATAGTGGAATGACA 1623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1593 ATATGGATGGTGTACTCTAAGGTTGAAATGCCCCATCATTTTATAAATAGTGGAATGACA 1652
Query 1624 GATATCTTAAACCAGAGTGCACACAAAAGGGCCTCAGGCGTATTGAATGAACCGGCCCAA 1683
||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||
Sbjct 1653 GATATCTTAAACCAGAGCGCGCACAAAAGGGCCTCAGGCGTGTTGAATGAACCGGCCCAA 1712
Query 1684 ATTGCAGCTACCCGTGCTGAACTTCACCGTCGAAGTATTGCACAGATGCGGATTAACAAC 1743
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1713 ATTGCAGCTACACGTGCTGAACTTCACCGTCGGAGTATTGCACAGATGCGGATTAACAAC 1772
Query 1744 CGTTCAATACAAGACATGCATATACTTGGAGATCCTATGCGGGTTCCTATTGTTATAATT 1803
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1773 CGTTCAATACAAGACATGCATATACTTGGAGATCCTATGCGGGTTCCTATTGTTATCATT 1832
Query 1804 GAACGTGTCTTGAATGCACCAAGACGCACTTTAAGTGATAATTCGTATCTGAGACATATG 1863
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1833 GAACGTGTCTTGAATGCACCAAGACGCACTTTAAGTGATAATTCGTATTTGAGACATATG 1892
Query 1864 GATCTGCTTGATTCTAGCTTACTTAATGGGCACAAGGATGAAGCAGAAAAAACAAAAG-C 1922
|||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |
Sbjct 1893 GATCTGCTTGATTCTAGCTTGCTAAATGGGCACAAGGATGAAGCAGAAAAAACAAAAGTC 1952
Query 1923 TACTAACTCCCACCAAAGTGCCCGTGAACTAAAAATCGT--T----G-----GG----CA 1967
||||||||||| |||||||||||||||||||||||||| | | || ||
Sbjct 1953 -ACTAACTCCCAGCAAAGTGCCCGTGAACTAAAAATCGTCGTATTTGTTCATGGTTTTCA 2011
Query 1968 ------TCACTTGGACTTACGGCTTTTCCGGAATCAGTGGCTTTTGATAGATCCAAAGAT 2021
||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||
Sbjct 2012 GGGGCATCACTTGGACTTAAGGCTTGTCCGGAATCAGTGGCTTCTGATAGATCCAAAGAT 2071
Query 2022 AGAGTTTCTCATGTCAGAGGCAAATGAGGAGAAAACACATGGCGATTTCAGGGAAATGGG 2081
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2072 AGAGTTTCTCATGTCTGAGGCAAATGAGGAGAAAACACATGGTGATTTCAGGGAAATGGG 2131
Query 2082 ACAAAGGCTCGCGCAGGAAGTTGTTTCTTTCCTTAAGAGGAAAAAGGATAGATATGCGAG 2141
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2132 ACAAAGGCTCGCTCAAGAAGTTGTTTCTTTCCTTAAGAGGAAAAAGGATAGATATGCAAG 2191
Query 2142 ACA-GGGACAATTGAAAAGCATCAAATTGAGTTTTGTCGGGCATTCCATCGGCAATGTCA 2200
||| ||| || |||||||||||||||||||||||||| || ||||| || ||||||||||
Sbjct 2192 ACAAGGG-CATTTGAAAAGCATCAAATTGAGTTTTGTTGGTCATTCTATTGGCAATGTCA 2250
Query 2201 TTATCAGAACAGCAATTGCCGATAGTTTAATGGAACCATACAGGAAGTTTCTACACACAT 2260
| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2251 TCATCAGAACAGCAATTGCCGATAGTTTAATGGAACCATACAGGAAGTATCTACACACAT 2310
Query 2261 ATCTATCGCTTTCAGGTCCGCACTTGGGGTATCTATACAGTACAAACTCCTTATTTAATT 2320
||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 2311 ATCTATCGCTTTCGGGTCCGCACTTGGGGTATCTGTACAGTACAAACTCCTTGTTTAATT 2370
Query 2321 CCGGGCTTTGGCTCCTGAAGAAGTTAAAGAGTACACAAGTTATCCATCAGCTTACACTCA 2380
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2371 CCGGGCTTTGGCTACTGAAGAAGTTAAAGAGTACACAAGTTATCCATCAGCTTACACTCA 2430
Query 2381 CAGATGATCCTGATCTCCGGCATACTTTCTTTTACAAACTCTGCAAGCAAAAGACATTGG 2440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2431 CAGATGATCCTGATCTCCGGCATACTTTCTTTTACAAACTCTGCAAGCAAAAGACATTGG 2490
Query 2441 AAAACTTCAAAAATATAATTCTCCTCTCATCGCCTCAGGACGGTTATGTTCCATATCACT 2500
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2491 AGAATTTCAAAAATATAATTCTCCTCTCATCGCCTCAGGACGGTTATGTTCCATATCACT 2550
Query 2501 CAGCAAGAATTGAATCATGCCAACCAGCTTCTTTCGACAGCTCGAAAAAGGGAGTAGCCT 2560
|||||||||| || ||||||||||| |||||||||||||||||||||| |||||| ||||
Sbjct 2551 CAGCAAGAATCGAGTCATGCCAACCTGCTTCTTTCGACAGCTCGAAAAGGGGAGTTGCCT 2610
Query 2561 TCTTGGAAATGCTGAATAATTGTTTGGACCAAATACGTGGACCGGTACCCGAAGCACCAC 2620
||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |
Sbjct 2611 TCTTGGAAATGCTGAATAATTGTCTGGACCAAATACGTGGACCGGTCCCCGAAGCACCTC 2670
Query 2621 ATCAGCAACGGGTGTTCATGCGCTGCGACGTCAACTTCGACATGACCGTGTATGGCCGTA 2680
|||||||| |||||||||||||||||||||||||||| ||||||||||| ||||| ||||
Sbjct 2671 ATCAGCAAAGGGTGTTCATGCGCTGCGACGTCAACTTTGACATGACCGTTTATGGTCGTA 2730
Query 2681 ACCTGAACTCATTCATCGGACGTGCTGCTCACATCGAGTTTTTAGAGTCGGATATCTTTG 2740
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||
Sbjct 2731 ACCTGAACTCATTCATCGGACGTGCTGCTCACATCGAGTTTTTGGAGTCCGATATATTTG 2790
Query 2741 CTAGATTCATAATGTGGTCATTCCAAGATCTTTTCCGCTGAATTTTGGTACCAAGTTGGA 2800
||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 2791 CTAGATTTATAATGTGGTCATTCCAAGATCTTTTCCGCTGAATTTTG-TACCAAGTTGAA 2849
Query 2801 GAAATTTTGGGATTCACAGTGAGATATAAACTGTTGTATATTAGCTATATAGATAGACAG 2860
|||||||||||||| |||| ||||||||||||||||||||||| || | | | |||| ||
Sbjct 2850 GAAATTTTGGGATTTACAGAGAGATATAAACTGTTGTATATTAACT-T-T-G-TAGATAG 2905
Query 2861 ATTGTTTTGTCTACAATTGCTTT-G-GAGA--GAAAAAT-AGATAGTTGGCCT-ACAAGC 2914
|| || ||||||||||||| | | |||| |||||| ||||||||||| | ||||||
Sbjct 2906 -TT-TT--GTCTACAATTGCTGTCGCGAGAAAGAAAAAACAGATAGTTGGCTTTACAAGC 2961
Query 2915 AATGT---ACGTTCTTGTAGATATAGATAGAtttttttttttttttttttttttttG 2968
||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 2962 AATGTTGTACGTTCTTGTAGATATAGATAGATTTTTTTTTTTTTTCTTTATTTTTTG 3018
Score = 307 bits (166), Expect = 4e-82
Identities = 238/272 (88%), Gaps = 7/272 (3%)
Strand=Plus/Plus
Query 1 TTACCCGACAAATTTACTC--AATTCCGACCTAAAGTTTTGATTTTTATAATCAATTTTT 58
||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||
Sbjct 1 TTACCCGACAAATTTACTCAAAAATCCGACCTAAAGTTTTGATTTTTATAATCAAATTTC 60
Query 59 CTCGAATTACTCGACAAAATTTTATTCCTTCACCATCACAATTTGTATTTTTCCCAGATC 118
|||||||| |||||||||| |||||||||| |||||||||||||||| ||| ||||||||
Sbjct 61 CTCGAATTGCTCGACAAAAGTTTATTCCTTTACCATCACAATTTGTAGTTTACCCAGATC 120
Query 119 CTTTTTTCCTCTGTTCT--CTTTCACATTGTTATCTTCAGTGTCTGTCACATTGTTCTCT 176
||||| ||||||||| | ||||| ||||||||||||||||||||||| |||||||| ||
Sbjct 121 CTTTTCTCCTCTGTTTTTTCTTTCGCATTGTTATCTTCAGTGTCTGTCTCATTGTTCCCT 180
Query 177 TTCCCCAGAAGCTGAAACCaaaaaaaaGCTATAttttttt-tttCGTTTCTGTGAATCGT 235
|| ||||||||||||||| ||| | | ||||||| ||| ||||||||||||| |
Sbjct 181 TTTCCCAGAAGCTGAAAC-AAATCTGTTTTTTTTTTTTTTGTTTTGTTTCTGTGAATCTT 239
Query 236 CAGATCTTGATCTGAGAGACC-TAAAGGTTCT 266
||||||||||||||||||||| || || ||||
Sbjct 240 CAGATCTTGATCTGAGAGACCCTACAGATTCT 271
> AT1G09980.1 | Symbols: | Putative serine esterase family protein
| chr1:3256245-3261614 REVERSE LENGTH=3159
Length=3159
Score = 2080 bits (1126), Expect = 0.0
Identities = 2027/2448 (83%), Gaps = 117/2448 (5%)
Strand=Plus/Plus
Query 415 CATATGTTACACCGTCTTAGATGGTTAATTGGATTGAGTAAAAGAAGTAGACAAGCAAAG 474
|||||||||| ||||||| |||||||||||||| |||| |||||||||| ||| |||||
Sbjct 452 CATATGTTACGCCGTCTTGGATGGTTAATTGGACTGAGCCAAAGAAGTAGGCAAACAAAG 511
Query 475 ACGCTTGATGCTAAACCTTACATAGCCAAGGTTAAGCCAGTACTGATGGTTGACACGGTT 534
|| |||||||| | |||||| |||||| |||||||||||| || ||| | ||||| |||
Sbjct 512 TCGATTGATGCTGAGCCTTACGTAGCCAGGGTTAAGCCAGTGCTAATGATCGACACTGTT 571
Query 535 CAAGAGATTGCGATTTATATCCACCGGTTTCATAACCTTGATCTTTTCCAACAAGGATGG 594
|| |||||||| || |||||||| ||||||||||||||||||||||||| |||||||||
Sbjct 572 CAGGAGATTGCTATCTATATCCATAGGTTTCATAACCTTGATCTTTTCCAGCAAGGATGG 631
Query 595 TATCAAATCAAAATCACCATGAGATGGGAGGATGGAGATAACGTAACT-C-GGGGTATTC 652
|||||||| ||||||| |||||||||||||||||| || ||| |||| | | || ||||
Sbjct 632 TATCAAATAAAAATCAGCATGAGATGGGAGGATGGTGACAAC--AACTCCTGTGGAATTC 689
Query 653 CTTCACGAGTCGTTCAGTATGAAGCTAC-TGAATCCGGTTCTAATGACTCGTACGGAGTG 711
|||||||||| |||||||||||||| | ||| || || || ||||| || ||||||
Sbjct 690 CTTCACGAGTTGTTCAGTATGAAGC-GCTTGATTCAACCTCAAACGACTCATATGGAGTG 748
Query 712 TGGAGGATAGTTGATAAAGATAATAGTTTCTTAACACAGCCCTTCCGTATCAAATATGCA 771
|||| ||||| |||||| |||| |||||||||||||||||||||||| || |||||||||
Sbjct 749 TGGAAGATAGATGATAAGGATAGTAGTTTCTTAACACAGCCCTTCCGCATTAAATATGCA 808
Query 772 CGGCAGGATATTCGTTTGTGTATGATGATCTCATTTACTCTGCCACTGGAACGATATGAG 831
|||||||| ||||| | || |||||| ||||||||||| |||| |||||| ||||||||
Sbjct 809 AGGCAGGATGTTCGTCTCTGCATGATGGTCTCATTTACTATGCCTCTGGAAAGATATGAG 868
Query 832 GGATCAGCTACATCTGCTGCTATATTAAAGTTTGAGCTCATGTATGCTCC-TTC-TGTA- 888
|| ||||||||||| |||| |||||| ||||||||||| ||||| |||| || || |
Sbjct 869 GGGTCAGCTACATCGGCTGTTATATTGAAGTTTGAGCTTTTGTATTCTCCAATCATGGAG 928
Query 889 GATAATGCATCAGCGA-AGCATTTAGATGCTTCTTCTGTTGCAGTTCATGAGTTCCGTAT 947
||| || | | | || | |||| |||||||| | ||| ||||| ||||| || |||||
Sbjct 929 GAT-AT--ACCTGTGACA-CATTCAGATGCTTGTGCTGCGGCAGTGCATGAATTTCGTAT 984
Query 948 TCCTCCTAAAGCTCTTACAGGCTTGCATTCTTACTGTCCAGTGCATTTTGATACAC-TTC 1006
|||||||||||||||| ||||| |||||||||||||||||||||| |||||||| | |||
Sbjct 985 TCCTCCTAAAGCTCTTTCAGGCGTGCATTCTTACTGTCCAGTGCACTTTGATAC-CTTTC 1043
Query 1007 ATGCGGTTCTTGTCGATGTGAGTGTCCACATCAGTGT-ATTGAAATCGGCTGCGTATAAA 1065
| ||||||||| ||||||| ||||||||| |||| || | ||||||| ||||| || |||
Sbjct 1044 ACGCGGTTCTTATCGATGTAAGTGTCCACGTCAGCGTCA-TGAAATCCGCTGCTTACAAA 1102
Query 1066 CGACCTGCACGTCTATCAAGTG--GCGTAAGTAACAGTAAAAA--TG-TCAGTGGCAGCA 1120
|| |||||| | ||||||||| ||| ||||| ||||||| || |||||||| |
Sbjct 1103 CGGCCTGCAATTTTATCAAGTGATGCG--AGTAATGGTAAAAATTTGACCAGTGGCA--A 1158
Query 1121 GCGCTCAATCTTTTAAGAAAGCAC-TTGGTTTGCTTGCTTCTGCTGATAAGAAACTGGTG 1179
||| |||| || ||||| | || | | ||||||||||| ||||| ||||||
Sbjct 1159 -TATTCAGTCTTCCAAAAAAGC-CTTTACTCAAATCGCTTCTGCTGACAAGAAGCTGGTG 1216
Query 1180 TCATTTGTCAAAGCATTACTTGGAGCTCGTGGTATTTTACTCGAGGAAATGCAAAGACTT 1239
|||||||| ||||| ||||| |||||||||| | ||| || || ||||||||||| |||
Sbjct 1217 TCATTTGTAAAAGCCTTACTCGGAGCTCGTGACACTTTGCTTGAAGAAATGCAAAGGCTT 1276
Query 1240 AGCAAGGCAGTTGGTCAAACGA-TAGACTTGTCTGACTTTGTATCAAACATGAACAATAT 1298
||||| |||||||||||||| | | ||||||||||| |||||||| | ||| |||||
Sbjct 1277 AGCAAAGCAGTTGGTCAAAC-AGTTGACTTGTCTGAGTTTGTATCCAGTATGGACAATGC 1335
Query 1299 TCCCTTATC--A---A-ACTCAAC-----AA----TT--A----ACGGTTCAGGACAAGG 1337
|| ||||| | | ||||| || || | | ||||||||||||||
Sbjct 1336 TCTTTTATCTGACTCAGGTTCAACGGGAAAATCTGTTGAAGTTGAAGGTTCAGGACAAGG 1395
Query 1338 CAAGGAACAAAACAGTCTTGAGAAGTTGAATATCACATTTGATTTAGCAAGTGATGATTG 1397
|||| |||||||| |||||||||||||||| | |||||||||||||||||||||| ||
Sbjct 1396 CAAGCTACAAAACAATCTTGAGAAGTTGAATGGCCCATTTGATTTAGCAAGTGATGACTG 1455
Query 1398 GCTTCATGAAC-TCTCGAAGGATCATCTATCCCGTATATTCCACTTACTGGGCACCCAGC 1456
|||||| ||| |||| ||||| |||||||| || | |||||||||||||||||||||||
Sbjct 1456 GCTTCA-CAACTTCTCAAAGGAGCATCTATCTCGCACATTCCACTTACTGGGCACCCAGC 1514
Query 1457 TGCATCATCTTTGGAACACATTTCTGGGATTTCACCGGGATAATCACACAAAAATAC-TG 1515
| ||| |||| ||||| || |||||| ||| |||||||||||| |||||||||| | ||
Sbjct 1515 TCCATTATCTATGGAATACCTTTCTGACATTGCACCGGGATAATTACACAAAAAT-CTTG 1573
Query 1516 GAATATCTTTGTGATATCTGGACTAAAGATCGAAGAGCTGAATGGTCAATATGGATGGTG 1575
||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1574 GAATATCTTCGCGATATCTGGACTAAAGATCGAAGAGCGGAATGGTCAATATGGATGGTG 1633
Query 1576 TACTCTAAGGTTGAAATGCCCCATCATTTTATAAATAGTGGAAT-GACAGATATCTT-AA 1633
||||| |||||||||||||| ||||||||||| | |||||||| || || || || ||
Sbjct 1634 TACTCCAAGGTTGAAATGCCACATCATTTTAT--A-AGTGGAATGGA-GGACAT-TTCAA 1688
Query 1634 ACCAGAGTGCACACAAAAGGGCCTC-A---GG-CGTA-TTGAATGAACCGGCCCAAATTG 1687
|||| ||| |||||||||| | ||| | || | | ||||||| || || ||| |||
Sbjct 1689 ACCATAGTTCACACAAAAGAGTCTCGACTGGGTTGAAGCTGAATGATCCTGCACAAGTTG 1748
Query 1688 CAGCTACCCGTGCTGAACTTCACCGTCGAAGTATTGCACAGATGCGGATTAACAACCGTT 1747
|| | ||||| ||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 1749 CATCCACCCGCGCTGAACTTCACCGTCGAAGTATTGCACAAATGCGGATAAACAACCGGG 1808
Query 1748 CAATACAAGACATGCATATACTTGGAGATCCTATGCGGGTTCCTATTGTTATAATTGAAC 1807
|||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||
Sbjct 1809 CAATACAAGACATGCATATATTTGGTGATCCTATGCGGGTTCCTATAGTTATAATTGAAC 1868
Query 1808 GTGTCTTG-AATGCACCAAGACGCACTTTAAGTGATAATTCGTATC-TGAGACATATGGA 1865
|||| ||| ||||||||||| || || || |||||||||||||| | |||||||| | ||
Sbjct 1869 GTGT-TTGGAATGCACCAAGGCGTACGTTCAGTGATAATTCGTA-CATGAGACATGTTGA 1926
Query 1866 TCTGCTT-GATTCTAGCTTACTTAATGGGCACAAGGATGA-AGCAGAAAAAACAAAAGC- 1922
| | | ||||||||||||||||||||||| | ||||| || | | || |||| |
Sbjct 1927 TA-GAATCGATTCTAGCTTACTTAATGGGCATGATGATGAGAGTGGGACGAA-AAAA-CA 1983
Query 1923 TACTAACTCC-CACCAAAGTGCCCGTGAACTAAAAAT-------------C--G-TT--- 1962
|| |||| || || || | || ||||| || || || | | ||
Sbjct 1984 TATTAAC-CCACAGCATACTGGGCGTGAGCTGAAGATTGTTGTTTTTGTTCATGGTTTCC 2042
Query 1963 -GGG-CATCACTTGGACTTACGGCTTTTCCGGAATCAGTGGCTTTTGATAGATCCAAAGA 2020
||| |||||||| ||| || ||||| |||||||||||||||| | || ||||||||||
Sbjct 2043 AGGGGCATCACTTAGACCTAAGGCTTATCCGGAATCAGTGGCTCCTAATTGATCCAAAGA 2102
Query 2021 TAGAGTTTCTCATGTCAGAGGCAAATGAGGAGAAAACACATGGCGATTTCAGGGAAATGG 2080
|||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 2103 TAGAGTTTCTCATGTCTGAGGCAAATGAGGAGAGAACACATGGCGATTTTAGGGAAATGG 2162
Query 2081 GACAAAGGCTCGCGCAGGAAGTTGTTTCTTTCCTT-AAGAGGAAAAAGGATAGATATGCG 2139
| || ||||| |||||||||||||||||||| || |||||||||||||||| | |||||
Sbjct 2163 GTCAGAGGCTTGCGCAGGAAGTTGTTTCTTTT-TTCAAGAGGAAAAAGGATAAACATGCG 2221
Query 2140 AGACA-GGGACAATTGAAAAGCATCAAATTGAGTTTTGTCGGGCATTCCATCGGCAATGT 2198
||| | ||| | ||||||| |||||| |||||||||| || ||||| || || || ||
Sbjct 2222 AGATACGGG-CGCTTGAAAAACATCAAGCTGAGTTTTGTTGGACATTCAATTGGTAACGT 2280
Query 2199 CATTATCAGAACAGCAATTGCCGATAGTTTAATGGAACCATACAGGAAGT-TTCTACACA 2257
||| |||||| | ||||| || |||||||| ||||| ||||||||||||| || | || |
Sbjct 2281 CATCATCAGAGCTGCAATAGCTGATAGTTTGATGGATCCATACAGGAAGTATTTT-CATA 2339
Query 2258 CATATCTATCGCTTTCAGGTCCGCACTTGGGGTATCTATACAGTACAAACTCCTTATTTA 2317
||||| |||||||||| ||||| |||||||| |||||||||||| |||| ||||| ||||
Sbjct 2340 CATATATATCGCTTTCGGGTCCACACTTGGGTTATCTATACAGTTCAAATTCCTTGTTTA 2399
Query 2318 ATTCCGGGCTTTGGCTCCTGAAGAAGTTAAAGAGTACACAAGTTATCCATCAGCTTACAC 2377
|||| || ||||||||||||||||||||||||||||| || ||||| |||||||||||||
Sbjct 2400 ATTCTGGACTTTGGCTCCTGAAGAAGTTAAAGAGTACTCAGGTTATTCATCAGCTTACAC 2459
Query 2378 TCACAGATGATCCTGATCTCCGGCATACTTTCTTTTACAAACTCTGCAAGCAAAAGACAT 2437
||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||| |
Sbjct 2460 TCACAGATGATCCTGATCTCCAGAATACTTTCTTTTACAAGCTCTGCAAGCAAAAGACGT 2519
Query 2438 TG-GAAAACTTCAAAAATATAATTCTCCTCTCATCGCCTCAGGACGGTTATGTTCCATAT 2496
|| | | ||||| |||||||||||||| || ||||||||||| || ||||||||||||
Sbjct 2520 TGTGCAGT-TTCAAGAATATAATTCTCCTGTCTTCGCCTCAGGATGGGTATGTTCCATAT 2578
Query 2497 CACTCAGCAAGAATTGAATCATGCCAACCAGCTTCTTTCGACAGCTCGAAAAAG-GGAGT 2555
|||||||| || ||||| ||||||||||||||||||||||||| ||| |||||| || ||
Sbjct 2579 CACTCAGCTAGGATTGAGTCATGCCAACCAGCTTCTTTCGACAACTC-AAAAAGAGGTGT 2637
Query 2556 AGCCTTCTTGGAAATGCTGAATAATTGTTTGGACCAAATACGTGGACCGGTACCC-GAAG 2614
|| |||||||| ||||| ||||| ||| |||||||||||||||| || | ||| |||
Sbjct 2638 TGCTTTCTTGGAGATGCTTAATAACTGTATGGACCAAATACGTGGGCCA-TCCCCTGAAA 2696
Query 2615 CACCACATCAGCA-ACGGGTGTTCATGCGCTGCGACGTCAACTTCGACATGACCGTGTAT 2673
| || || || || | | |||||||||||||| || ||||||||||||| ||| |||||
Sbjct 2697 CTCCGCACCACCAGA-GAGTGTTCATGCGCTGTGATGTCAACTTCGACACAACCTTGTAT 2755
Query 2674 GGCCGTAACCTGAACTCATTCATCGGACGTGCTGCTCACATCGAGTTTTTAGAGTCGGAT 2733
|| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||
Sbjct 2756 GGTCGTAACCTGAACTCATTCATCGGCCGTGCTGCTCACATCGAGTTTTTGGAGTCTGAT 2815
Query 2734 ATCTTTGCTAGATTCATAATGTGGTCATTCCAAGATCTTTTCCGCTGA 2781
||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 2816 GTCTTTGCAAGATTCATAATGTGGTCATTCCAAGATCTATTCCGCTGA 2863
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 147540979363
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5