BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475423
Length=2044
Score E
Sequences producing significant alignments: (Bits) Value
AT1G58122.1 | Symbols: CPuORF45 | conserved peptide upstream op... 3210 0.0
AT1G58120.1 | Symbols: | BEST Arabidopsis thaliana protein mat... 3210 0.0
> AT1G58122.1 | Symbols: CPuORF45 | conserved peptide upstream
open reading frame 45 | chr1:21520401-21522457 FORWARD LENGTH=2057
Length=2057
Score = 3210 bits (1738), Expect = 0.0
Identities = 1969/2073 (95%), Gaps = 45/2073 (2%)
Strand=Plus/Plus
Query 1 ATTGCGAGAAACAAAGAAAGCTTAACCCTCAAGAAATCAAACCCACaaaaaaaTCAAATT 60
||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||
Sbjct 1 ATTGCGAGAAACAAAGAAAACTTAAGCCTCAAGAAATCAAACCCAC-AAAAAATC-AATT 58
Query 61 CAATAAAACCTCTTTCTGCTCTTC-CTCTCTTTTTCATTCCCATATGTTGCTTCCTTGAA 119
||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 59 CAACAAAACCTCTTTCTGCTC-TCTCTCTCTTTTTCATTCCCATATGTTGCTTCCTTGAG 117
Query 120 TTCATCTCTTCTCTTCCGAAAGAATGGGGAGCAACATCTGAGGATCCATTTGATTACCAT 179
|| ||||| | || || |||||||||| |||||||||||||||||||||||||||||||
Sbjct 118 TTTATCTC-T-TC--CC-AAAGAATGGGAAGCAACATCTGAGGATCCATTTGATTACCAT 172
Query 180 ACATAACTTATATTCAAAACAAAAAC--ATATCTTTGTGTGTGCGCGTTAATGATGAAAT 237
|| | |||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 173 AC---A--TATATTAAAAACAAAAACATATATCTTTGTGTGTGCGCGTTAATGATGAAAT 227
Query 238 AGCAGATTGAGAGCAAGAAAGAGGTAATAGCTGATAACCGCAATGGAGATTCAGAGGATG 297
||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct 228 AGCAGATTGAGAGCAAGAAAGAGGTCATAGCTGATAACCACAATGGAGATTCAGAGGATG 287
Query 298 AGGCAGTTGATGTCTCTTTGGTCTAATTTGAAGAGTAGCCGCGTTTCTCTCACCGGTGGG 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 288 AGGCAGTTGATGTCTCTTTGGTCTAATTTGAAGAGTAGCCGCGTTTCTCTCACCGGTGGG 347
Query 358 AATCATACAGCCGCAAGGTTCTGCACTCGCTAGGCTCGCctcttctctcgctcgcttttt 417
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 348 AATCATACAGCCGCAAGGTTCTGCACTCGCTAGGCTCGCCTCTTCTCTCGCTAGC-TTTT 406
Query 418 tctttcttctttctcttcttcttacttccttttgattctcttttagctctctattctatt 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 407 TCTTTCTTCTTTCTCTTCTTCTTACTTCCTTTTGATTCTCTTTTAGCTCTCTATTCTCTT 466
Query 478 ctcttctcttctctctttcct-tttctttaactttcaactgtacattttcgcgcgctctc 536
|||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||
Sbjct 467 CTCTTCTCTTCTCTTTTTCCTATTTCTTTAACTTTCAACTGTACATTTTCGCGCGCGCTC 526
Query 537 tttGTCTCAGCTTTTAAGACATAAC-AAA-AAGATATGGTGTTTGTTACTGTCCAAGACT 594
||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct 527 TTTGTCTCAGCTTTTAAGACATAACAAAACAAGATATGGTGTTTGTTACTGTCCAAGACT 586
Query 595 TTCACTCCATGTGCCAAAAGCATTTTCACTACCTCTTGAAAAAGAGAGACTGCCCGAGCT 654
|||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||
Sbjct 587 TTCACTCCATGTGCCAAAAGCATTGTCACTACCTCTTGAAAAAGAGAGACCGCTCGAGCT 646
Query 655 CCTCTATAAGCTCTGCGGATACTTTCCTCAAGGCTTCTCGCTCTGAAGTCTTGAGTCTCT 714
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 647 CCTCTACAAGCTCTGCGGATACTTTCCTCAAGGCTTCTCGCTCTGAAGTCTTGAGTCTCT 706
Query 715 TTATGAGATCAACGCTTTTGGCTTTGTTGTTTCTGTCATTTACTTGGTTAAGTCTCCTCA 774
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 707 TTATGAGATCAACGCTTTTGGCTTTGTTGTTTCTGTCATTTACTTGGTTAAGTCTCCTGA 766
Query 775 AATATGGAACTTCTGCAACCGCTCCATCTAAGTCGGTTGAATCTGACCTTCCTGAATTAC 834
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 767 AATATGGAACTACTGCAACCGCTCCATCTAAGTCGGTTGAATCTGACCTTCCTGAATTAC 826
Query 835 TGCCTTTGCTTCTCAACGATTTGGAGAAGGAAGGTCTCTTTAAGATGGGAGATAAAGCAC 894
| |||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct 827 TACCTTTGCTCCTCAACGATTTGGAGAAGCAAGGTCTCTTTAAGATGGGTGATAAAGCAC 886
Query 895 TCTTCCTAAGTGGAGGAGATGATGAGGTCACTGTTTCTTCATACTCTCAAACAGTGATCG 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 887 TCTTCCTAAGTGGAGGAGATGATGAGGTCACTGTTTCTTCATACTCTCAAACAGTGATCG 946
Query 955 AAACTGATATGGTTCTTGTATCTGCAAGCAATCAGGAGATGCAGAGCATGGTCCCAGATG 1014
||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct 947 AAACTGATATGCTTCTTGTATCTGCAAGCGATCAGGAGATGCAGAGCATGGTACCAGATG 1006
Query 1015 AGACCTTTGATTTCGCCTTTGCGCATTCTCGTCACATTGACTCTGCTGAATTTATAGACA 1074
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1007 AGACCTTTGATTTCGCCTTTGCGCATTCTCGCCACATTGACTCTGCTGAATTTATAGACA 1066
Query 1075 GGACTCTTAAAGTTGGCGGCATCTTTACCGTCCAACTCAACCTTCAAGATCTTCCTCCAA 1134
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct 1067 GGACTCTTAAAGTTGGCGGCATCTTCACCGTCCAGCTCAACCTTCAAGATCTTCCTCCAA 1126
Query 1135 ATTTCTTGAAACATCCAAACTACGAAATAGTCTACGTAAAGAGCTCTGAGTACACGGTAA 1194
||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||
Sbjct 1127 ATTTCTTGAAACATCCAAACTACGAGATAGTTTACGTAAAGAGCTCTGAGTATACGGTAA 1186
Query 1195 TGACGATGAGGAAAACAGGGGAAACAGAGCATAAACAGAGCTTAGTCGCCCCCGGGAGAA 1254
||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct 1187 TGACGATGAGGAAAACAGGGGAAACAGAGCAAAAACAGAGCTTAGTCGCCACCGGGAGAA 1246
Query 1255 AGCTTCTCGGTATCACAGAAGAAGAGGCCAGGGAAAAAGCTTTGAGAAAGCTAGAGGATG 1314
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1247 AGCTTCTCGGTATCACAGAAGAAGATGCCAGGGAAAAAGCTTTGAGAAAGCTAGAGGATG 1306
Query 1315 TTCTCCTTGAACCACCAAGAGCAGCTTCAAGGAAATCAAGAACTTACTTCAAACGGACAC 1374
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 1307 TTCTCCTTGAACCACCAAGAGCAGCTTCAAGGAAATCAAGAACATACTTCAAACGGACTC 1366
Query 1375 GGTACCTCCCGGACCTTATGGGAGACAATTTGGACCTCGAGAGCTACTCAAGGCGGGTAT 1434
|||||||||| ||||||||||||||||| |||||||| ||||||||||| ||||||||||
Sbjct 1367 GGTACCTCCCAGACCTTATGGGAGACAACTTGGACCTGGAGAGCTACTCGAGGCGGGTAT 1426
Query 1435 TTATCGATGTGGGAAACGGAAAAGGAAGCAGCGGAATGGAATGGTTTGTTGAAAATTACC 1494
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1427 TCATCGATGTGGGAAACGGAAAAGGAAGCAGCGGAATGGAATGGTTTGTTGAAAATTACC 1486
Query 1495 CAACAAGGAATCAGAAGTTTGAGATGTACAAGATTGAGACGGTGAACGATGAGATGAGCC 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1487 CAACAAGGAATCAGAAGTTTGAGATGTACAAGATTGAGACGGTGAACGATGAGATGAGCC 1546
Query 1555 TAGAATCTGAGAAAATGGGCATGACGGAGTGGCTGAAAGAGAATGTCAAGGAGGAGGAAT 1614
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct 1547 TAGAATCTGAGAAAATGGGAATGACGGAGTGGCTGAAAGAGAATGTCAAGGAAGAGGAAT 1606
Query 1615 ACGTGGTGATGAAGGCGGAGGCGGAAGTGGTGGAGGAGATGATGAGGAGCAAGTCGATAA 1674
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1607 ACGTGGTGATGAAGGCCGAGGCGGAAATGGTGGAGGAGATGATGAGGAGCAAGTCGATAA 1666
Query 1675 AAATGGTGGATGAGCTTTTCTTGGAGTGCAAGCCAAAGGGTTTAGGGCTAAGAGGAAGGA 1734
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 1667 AAATGGTGGATGAGCTTTTCTTGGAGTGCAAGCCAAAGGGTTTAGGGCTAAGGGGAAGAA 1726
Query 1735 AGATGCAGAGTAAGAGTGGTAGGGCTTATTGGGAGTGTTTGGCTCTTTATGGCAAACTAA 1794
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1727 AGATGCAGAGTAAAAGTGGTAGGGCTTATTGGGAGTGTTTGGCTCTTTATGGCAAACTAA 1786
Query 1795 GAGATGAAGGTGTTGCTGTGCATCAATGGTGGGGTTGAAGTTAAAGAACATGGAGACAGA 1854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1787 GAGATGAAGGTGTTGCTGTGCATCAATGGTGGGGTTGAAGTTAAAGAACATGGAGACAGA 1846
Query 1855 ACTGAGA-AGAATATTCATCAAATCAGtctctttttattctattttatgatt-ttttt-- 1910
||||||| ||||||| ||||||| ||||||||||||||| |||||| || || |||||
Sbjct 1847 ACTGAGAGAGAATATCCATCAAACCAGTCTCTTTTTATTATATTTTCTGTTTGTTTTTTT 1906
Query 1911 -ccctctgttgt--ct------------c-t-tttttgtttttgtgtgttaatttgtaat 1953
||||||||||| || | | ||||||||||||||||||||||||||||
Sbjct 1907 TCCCTCTGTTGTTTCTTTTTGTGAAAGGCCTCTTTTTGTTTTTGTGTGTTAATTTGTAAT 1966
Query 1954 catcaa-tatgttgttgtgttttatgtattttgtggtgtttaagtttGGGATCTGATGAG 2012
||| || | ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1967 CAT-AAGTTTGTTGTTGTGTTTTAAGTATTTTGTGGTGTTTAAGTTTGGGATCTGATGAG 2025
Query 2013 CTTAATTACATA-TCTTTCGTGTTTTCTTGTTG 2044
|||||||| | | | |||||||||| |||||||
Sbjct 2026 CTTAATTAAA-AGTGTTTCGTGTTTCCTTGTTG 2057
> AT1G58120.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: methyltransferases (TAIR:AT5G01710.1); Has 93 Blast
hits to 93 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes
- 0 (source: NCBI BLink). | chr1:21520401-21522457
FORWARD LENGTH=2057
Length=2057
Score = 3210 bits (1738), Expect = 0.0
Identities = 1969/2073 (95%), Gaps = 45/2073 (2%)
Strand=Plus/Plus
Query 1 ATTGCGAGAAACAAAGAAAGCTTAACCCTCAAGAAATCAAACCCACaaaaaaaTCAAATT 60
||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||
Sbjct 1 ATTGCGAGAAACAAAGAAAACTTAAGCCTCAAGAAATCAAACCCAC-AAAAAATC-AATT 58
Query 61 CAATAAAACCTCTTTCTGCTCTTC-CTCTCTTTTTCATTCCCATATGTTGCTTCCTTGAA 119
||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 59 CAACAAAACCTCTTTCTGCTC-TCTCTCTCTTTTTCATTCCCATATGTTGCTTCCTTGAG 117
Query 120 TTCATCTCTTCTCTTCCGAAAGAATGGGGAGCAACATCTGAGGATCCATTTGATTACCAT 179
|| ||||| | || || |||||||||| |||||||||||||||||||||||||||||||
Sbjct 118 TTTATCTC-T-TC--CC-AAAGAATGGGAAGCAACATCTGAGGATCCATTTGATTACCAT 172
Query 180 ACATAACTTATATTCAAAACAAAAAC--ATATCTTTGTGTGTGCGCGTTAATGATGAAAT 237
|| | |||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 173 AC---A--TATATTAAAAACAAAAACATATATCTTTGTGTGTGCGCGTTAATGATGAAAT 227
Query 238 AGCAGATTGAGAGCAAGAAAGAGGTAATAGCTGATAACCGCAATGGAGATTCAGAGGATG 297
||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct 228 AGCAGATTGAGAGCAAGAAAGAGGTCATAGCTGATAACCACAATGGAGATTCAGAGGATG 287
Query 298 AGGCAGTTGATGTCTCTTTGGTCTAATTTGAAGAGTAGCCGCGTTTCTCTCACCGGTGGG 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 288 AGGCAGTTGATGTCTCTTTGGTCTAATTTGAAGAGTAGCCGCGTTTCTCTCACCGGTGGG 347
Query 358 AATCATACAGCCGCAAGGTTCTGCACTCGCTAGGCTCGCctcttctctcgctcgcttttt 417
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 348 AATCATACAGCCGCAAGGTTCTGCACTCGCTAGGCTCGCCTCTTCTCTCGCTAGC-TTTT 406
Query 418 tctttcttctttctcttcttcttacttccttttgattctcttttagctctctattctatt 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 407 TCTTTCTTCTTTCTCTTCTTCTTACTTCCTTTTGATTCTCTTTTAGCTCTCTATTCTCTT 466
Query 478 ctcttctcttctctctttcct-tttctttaactttcaactgtacattttcgcgcgctctc 536
|||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||
Sbjct 467 CTCTTCTCTTCTCTTTTTCCTATTTCTTTAACTTTCAACTGTACATTTTCGCGCGCGCTC 526
Query 537 tttGTCTCAGCTTTTAAGACATAAC-AAA-AAGATATGGTGTTTGTTACTGTCCAAGACT 594
||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct 527 TTTGTCTCAGCTTTTAAGACATAACAAAACAAGATATGGTGTTTGTTACTGTCCAAGACT 586
Query 595 TTCACTCCATGTGCCAAAAGCATTTTCACTACCTCTTGAAAAAGAGAGACTGCCCGAGCT 654
|||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||
Sbjct 587 TTCACTCCATGTGCCAAAAGCATTGTCACTACCTCTTGAAAAAGAGAGACCGCTCGAGCT 646
Query 655 CCTCTATAAGCTCTGCGGATACTTTCCTCAAGGCTTCTCGCTCTGAAGTCTTGAGTCTCT 714
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 647 CCTCTACAAGCTCTGCGGATACTTTCCTCAAGGCTTCTCGCTCTGAAGTCTTGAGTCTCT 706
Query 715 TTATGAGATCAACGCTTTTGGCTTTGTTGTTTCTGTCATTTACTTGGTTAAGTCTCCTCA 774
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 707 TTATGAGATCAACGCTTTTGGCTTTGTTGTTTCTGTCATTTACTTGGTTAAGTCTCCTGA 766
Query 775 AATATGGAACTTCTGCAACCGCTCCATCTAAGTCGGTTGAATCTGACCTTCCTGAATTAC 834
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 767 AATATGGAACTACTGCAACCGCTCCATCTAAGTCGGTTGAATCTGACCTTCCTGAATTAC 826
Query 835 TGCCTTTGCTTCTCAACGATTTGGAGAAGGAAGGTCTCTTTAAGATGGGAGATAAAGCAC 894
| |||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct 827 TACCTTTGCTCCTCAACGATTTGGAGAAGCAAGGTCTCTTTAAGATGGGTGATAAAGCAC 886
Query 895 TCTTCCTAAGTGGAGGAGATGATGAGGTCACTGTTTCTTCATACTCTCAAACAGTGATCG 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 887 TCTTCCTAAGTGGAGGAGATGATGAGGTCACTGTTTCTTCATACTCTCAAACAGTGATCG 946
Query 955 AAACTGATATGGTTCTTGTATCTGCAAGCAATCAGGAGATGCAGAGCATGGTCCCAGATG 1014
||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct 947 AAACTGATATGCTTCTTGTATCTGCAAGCGATCAGGAGATGCAGAGCATGGTACCAGATG 1006
Query 1015 AGACCTTTGATTTCGCCTTTGCGCATTCTCGTCACATTGACTCTGCTGAATTTATAGACA 1074
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1007 AGACCTTTGATTTCGCCTTTGCGCATTCTCGCCACATTGACTCTGCTGAATTTATAGACA 1066
Query 1075 GGACTCTTAAAGTTGGCGGCATCTTTACCGTCCAACTCAACCTTCAAGATCTTCCTCCAA 1134
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct 1067 GGACTCTTAAAGTTGGCGGCATCTTCACCGTCCAGCTCAACCTTCAAGATCTTCCTCCAA 1126
Query 1135 ATTTCTTGAAACATCCAAACTACGAAATAGTCTACGTAAAGAGCTCTGAGTACACGGTAA 1194
||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||
Sbjct 1127 ATTTCTTGAAACATCCAAACTACGAGATAGTTTACGTAAAGAGCTCTGAGTATACGGTAA 1186
Query 1195 TGACGATGAGGAAAACAGGGGAAACAGAGCATAAACAGAGCTTAGTCGCCCCCGGGAGAA 1254
||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct 1187 TGACGATGAGGAAAACAGGGGAAACAGAGCAAAAACAGAGCTTAGTCGCCACCGGGAGAA 1246
Query 1255 AGCTTCTCGGTATCACAGAAGAAGAGGCCAGGGAAAAAGCTTTGAGAAAGCTAGAGGATG 1314
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1247 AGCTTCTCGGTATCACAGAAGAAGATGCCAGGGAAAAAGCTTTGAGAAAGCTAGAGGATG 1306
Query 1315 TTCTCCTTGAACCACCAAGAGCAGCTTCAAGGAAATCAAGAACTTACTTCAAACGGACAC 1374
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 1307 TTCTCCTTGAACCACCAAGAGCAGCTTCAAGGAAATCAAGAACATACTTCAAACGGACTC 1366
Query 1375 GGTACCTCCCGGACCTTATGGGAGACAATTTGGACCTCGAGAGCTACTCAAGGCGGGTAT 1434
|||||||||| ||||||||||||||||| |||||||| ||||||||||| ||||||||||
Sbjct 1367 GGTACCTCCCAGACCTTATGGGAGACAACTTGGACCTGGAGAGCTACTCGAGGCGGGTAT 1426
Query 1435 TTATCGATGTGGGAAACGGAAAAGGAAGCAGCGGAATGGAATGGTTTGTTGAAAATTACC 1494
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1427 TCATCGATGTGGGAAACGGAAAAGGAAGCAGCGGAATGGAATGGTTTGTTGAAAATTACC 1486
Query 1495 CAACAAGGAATCAGAAGTTTGAGATGTACAAGATTGAGACGGTGAACGATGAGATGAGCC 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1487 CAACAAGGAATCAGAAGTTTGAGATGTACAAGATTGAGACGGTGAACGATGAGATGAGCC 1546
Query 1555 TAGAATCTGAGAAAATGGGCATGACGGAGTGGCTGAAAGAGAATGTCAAGGAGGAGGAAT 1614
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct 1547 TAGAATCTGAGAAAATGGGAATGACGGAGTGGCTGAAAGAGAATGTCAAGGAAGAGGAAT 1606
Query 1615 ACGTGGTGATGAAGGCGGAGGCGGAAGTGGTGGAGGAGATGATGAGGAGCAAGTCGATAA 1674
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1607 ACGTGGTGATGAAGGCCGAGGCGGAAATGGTGGAGGAGATGATGAGGAGCAAGTCGATAA 1666
Query 1675 AAATGGTGGATGAGCTTTTCTTGGAGTGCAAGCCAAAGGGTTTAGGGCTAAGAGGAAGGA 1734
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 1667 AAATGGTGGATGAGCTTTTCTTGGAGTGCAAGCCAAAGGGTTTAGGGCTAAGGGGAAGAA 1726
Query 1735 AGATGCAGAGTAAGAGTGGTAGGGCTTATTGGGAGTGTTTGGCTCTTTATGGCAAACTAA 1794
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1727 AGATGCAGAGTAAAAGTGGTAGGGCTTATTGGGAGTGTTTGGCTCTTTATGGCAAACTAA 1786
Query 1795 GAGATGAAGGTGTTGCTGTGCATCAATGGTGGGGTTGAAGTTAAAGAACATGGAGACAGA 1854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1787 GAGATGAAGGTGTTGCTGTGCATCAATGGTGGGGTTGAAGTTAAAGAACATGGAGACAGA 1846
Query 1855 ACTGAGA-AGAATATTCATCAAATCAGtctctttttattctattttatgatt-ttttt-- 1910
||||||| ||||||| ||||||| ||||||||||||||| |||||| || || |||||
Sbjct 1847 ACTGAGAGAGAATATCCATCAAACCAGTCTCTTTTTATTATATTTTCTGTTTGTTTTTTT 1906
Query 1911 -ccctctgttgt--ct------------c-t-tttttgtttttgtgtgttaatttgtaat 1953
||||||||||| || | | ||||||||||||||||||||||||||||
Sbjct 1907 TCCCTCTGTTGTTTCTTTTTGTGAAAGGCCTCTTTTTGTTTTTGTGTGTTAATTTGTAAT 1966
Query 1954 catcaa-tatgttgttgtgttttatgtattttgtggtgtttaagtttGGGATCTGATGAG 2012
||| || | ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1967 CAT-AAGTTTGTTGTTGTGTTTTAAGTATTTTGTGGTGTTTAAGTTTGGGATCTGATGAG 2025
Query 2013 CTTAATTACATA-TCTTTCGTGTTTTCTTGTTG 2044
|||||||| | | | |||||||||| |||||||
Sbjct 2026 CTTAATTAAA-AGTGTTTCGTGTTTCCTTGTTG 2057
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 101304699810
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5