BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475432
Length=3864
Score E
Sequences producing significant alignments: (Bits) Value
AT1G58210.1 | Symbols: EMB1674 | kinase interacting family prot... 4259 0.0
AT1G09720.1 | Symbols: | Kinase interacting (KIP1-like) family... 538 2e-151
> AT1G58210.1 | Symbols: EMB1674 | kinase interacting family protein
| chr1:21553621-21558056 FORWARD LENGTH=3741
Length=3741
Score = 4259 bits (2306), Expect = 0.0
Identities = 2717/2910 (93%), Gaps = 50/2910 (2%)
Strand=Plus/Plus
Query 962 cttcttcttcttcttcttcCTTAGTAC-AGCAAAAAAGATGTTGCAGAGAGCAGCGAGCA 1020
|||| ||| ||||||||||||| |||| || |||||||||||||||||||||||||||||
Sbjct 875 CTTCCTCTGCTTCTTCTTCCTTGGTACAAG-AAAAAAGATGTTGCAGAGAGCAGCGAGCA 933
Query 1021 ATGCGTATTCATGGTGGTGGGCAAGTCATATCCGTACAAAGCAATCCAAATGGCTCGAAC 1080
|||| |||||||||||||||||||| || || |||||||| |||||||||||||||||||
Sbjct 934 ATGCTTATTCATGGTGGTGGGCAAGCCACATACGTACAAAACAATCCAAATGGCTCGAAC 993
Query 1081 ACAATCTTCAGGGTAGAATATACACTTAAGATCATAGATGAAGATGGAGACACTTTTGCT 1140
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 994 ACAATCTTCAGGGTAGAATATACTCTTAAGATTATAGATGAAGATGGAGACACTTTTGCT 1053
Query 1141 AAAAGAGCTGAGATGTATTACCGTAAAAGGCCGGAGATTGTTAATTTCGTGGAGGAAGCT 1200
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 1054 AAAAGAGCTGAGATGTATTACCGTAAAAGACCAGAGATTGTTAATTTCGTGGAGGAAGCT 1113
Query 1201 TTTCGGTCATACCGTGCCTTAGCTGAACGTTATGATCATTTATCTAGAGAGCTTCAAAGC 1260
||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1114 TTTCGTTCATACCGCGCTTTAGCTGAACGTTATGATCATTTATCTAGAGAGCTTCAAAGC 1173
Query 1261 GCAAACCGCACAATCGCCACAGCTTTCCCTGAACATGTTCAGTTTCCTTTGGAGGATGAT 1320
|||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1174 GCAAACCGTACAATAGCCACAGCTTTCCCTGAACATGTTCAGTTTCCTTTAGAGGATGAT 1233
Query 1321 AGTGATGAAAATGAAGATTATGAAGGGAA-TCCGCGTAAACCGCCTAAGCATCTTCATCT 1379
|||||||||||||||||||| | | |||| || || |||||||||||||||||||||||
Sbjct 1234 AGTGATGAAAATGAAGATTACG-ACGGAAGGCCACGAAAACCGCCTAAGCATCTTCATCT 1292
Query 1380 TATTCCCAAGGGAATCAACATACCTGAAGTTCCGGATATTCCAAAGAAGAAAGATTTCAG 1439
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1293 TATTCCCAAGGGGATCAACATACCTGAAGTTCCGGATATTCCTAAGAAGAAAGATTTCAG 1352
Query 1440 GAGTCAGTCTATGATGTTGTCTAGAAAAGGACCAGCTGGTCTGAAAAGGACA-GTATCTT 1498
|||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||
Sbjct 1353 GAGTCAGTCTATGATGTTGTCTAGAAAAGGACCAGCTGATCTGAAAAGGA-ATGTATCTT 1411
Query 1499 CTGCACAAGC-AAAGAGGGAAGCGGCGATTGTGCGTTCGGGATTGAGTAAAGAAGAGGGT 1557
|||||||||| ||| |||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 1412 CTGCACAAGCGAAA-AGGGAAGCGGCGATTGTGCGTTCGGGTTTGAGTAAAGAAGAAGGT 1470
Query 1558 TTGGAAGAGATTGATAAGCTTCAGAAGGGGATCTTGGCGTTGCAGACCGAGAAAGAGTTT 1617
||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 1471 TTGGAAGAGATTGATAAACTTCAGAAGGGGATCTTGGCGTTGCAGACTGAGAAGGAGTTT 1530
Query 1618 GTGAGGAGCTCATATGAACAGTCTTATGAGAGGTATTGGGATTTGGAGAATGAAGTGACT 1677
|||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct 1531 GTGAGGAGCTCATATGAAGAGTCTTATGAGAGATATTGGGATTTGGAGAATGAAGTGACT 1590
Query 1678 GAGATGCAGAAGAGCGTTTGTAACTTACAAGATGAGTTTGGTCTTGGTGCTTCGATTGAT 1737
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1591 GAGATGCAGAAGAGTGTTTGTAACTTACAAGATGAGTTTGGTCTTGGTGCTTCTATTGAT 1650
Query 1738 GATAGCGATGCTAGGACCTTGATGGCGAGCACTGCGTTGAGTTCTTGTAAGGACACACTT 1797
||||||||||||||||| ||||||||||| || || ||||||||||||| ||||||||||
Sbjct 1651 GATAGCGATGCTAGGACGTTGATGGCGAGTACCGCTTTGAGTTCTTGTAGGGACACACTT 1710
Query 1798 GCTAAGCTTGAGGAGAAACAGAGGAAATCGGTTGAAGAAGCGGAAATTGAGAAAGGAAGG 1857
|||||||||||||||||||||| || ||| |||||||||| || |||||||||||||||
Sbjct 1711 GCTAAGCTTGAGGAGAAACAGAAGATATCTATTGAAGAAGCCGAGATTGAGAAAGGAAGG 1770
Query 1858 ATTACTACTGCGAAAGAACGGTTTTATGCATTGAGGAACAAGTTTGAGAAACCGGAAAGT 1917
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct 1771 ATTACTACTGCGAAAGAAAGGTTTTATGCATTGAGGAACAAGTTTGAGAAACCGGAGAGT 1830
Query 1918 GATGTTCTTGATGAGGTTGTTAGGACAGACGAAGAAGAAGAGAAAGAGGCTGATGATGTG 1977
|||||||||||||||||| | ||||||||| |||| | || |||| | ||||||
Sbjct 1831 GATGTTCTTGATGAGGTTATCAGGACAGAC---GAAG-A-AG-AAGA-----A-GATGTG 1878
Query 1978 GTTCAAGAATCGATCTATGAATCCGAGAGGGAAGATTCAAGTGAGAATCTTACTGTTGTG 2037
||||||||||||| ||||||||| ||||| ||||| |||| |||||||||||||||||||
Sbjct 1879 GTTCAAGAATCGAGCTATGAATCTGAGAGAGAAGACTCAAATGAGAATCTTACTGTTGTG 1938
Query 2038 AAACTTGCAGAGAAGATTGATGATCTTGTGCATAGGGTGGTTTCATTGGAGACCAATGCT 2097
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1939 AAGCTTGCAGAGAAGATTGATGATCTTGTGCATAGGGTGGTTTCATTGGAGACCAATGCT 1998
Query 2098 TCCTCTCATACTGCATTGGTGAAGACATTAAGATCAGAGACAGATGAGTTACATGAACAT 2157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 TCCTCTCATACTGCATTGGTGAAGACATTAAGATCAGAGACAGATGAGTTACATGAACAT 2058
Query 2158 ATTCGTGGTCTAGAGGAGGACAAAGCGGCTCTTGTTTCGGATTCCACGGTTATGAAACAG 2217
|| ||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||
Sbjct 2059 ATCCGTGGTCTAGAGGAGGACAAAGCAGCTCTTGTTTCGGATGCCACAGTTATGAAACAG 2118
Query 2218 AGGATCACGGTGCTTGAAGACGAGCTGAGAAATGTTAGAAAACTATTCCAGAAAGTGGAA 2277
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2119 AGGATAACGGTGCTTGAAGACGAGCTGAGAAATGTTAGAAAACTATTCCAGAAAGTAGAA 2178
Query 2278 GATCAAAACAAGAATCTACAGAGCCAATTCAAGGTAGCTAATAGGACTGTTGATGATTTA 2337
|||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct 2179 GATCAAAACAAGAATCTACAGAACCAATTCAAGGTAGCTAACAGGACTGTTGATGATTTA 2238
Query 2338 TCTGGTAAGATACAAGATGTGAAGATGGATGAAGATGTTGAAGGAGCTGGAATTTTCCAG 2397
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2239 TCTGGCAAGATACAAGATGTGAAGATGGATGAAGATGTTGAAGGAGCTGGAATTTTCCAG 2298
Query 2398 GAATTGGCAGTTGTTTCAGGATCAGAAGATTCACGCGATGATTTGAAGTCAATCTCAACG 2457
|||||| | ||||||||||||||||||||||| || ||||||||||||||| ||||||||
Sbjct 2299 GAATTGCCTGTTGTTTCAGGATCAGAAGATTCTCGAGATGATTTGAAGTCAGTCTCAACG 2358
Query 2458 GAGACGGAAATGAGGAGTAGCGTGGAGAAAACGAAGAAAGATGTGATTGTAGTTAAAGAG 2517
|||| ||| || | | ||| | ||||| |||| |||||| |||
Sbjct 2359 GAGA---AAA----------CG---A-A----GAA-A--GATGTTATTGCAGTTAAGGAG 2394
Query 2518 AGTGAAGACAGTGAAAGAGCTCAAGAAGAGAAATCAGAGATGAAAGATTCGTTTGCGTTA 2577
|||||||| ||||||||||||||||||||||| ||||||| |||||||| |||||||||
Sbjct 2395 AGTGAAGATGGTGAAAGAGCTCAAGAAGAGAAACCAGAGATAAAAGATTCTTTTGCGTTA 2454
Query 2578 TCAGAAACTGCTAGCACTTGTTTCGGAACAGAAGCAGAAGATCTGGTGACGGAAGACGAG 2637
|||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2455 TCAGAAACCGCAAGCACTTGTTTCGGAACAGAAGCTGAAGATCTGGTGACGGAAGACGAG 2514
Query 2638 GATGAAGAGACACCAAACTGGAGGCAGTTGTTACCTGATGGCATGGAGGATAGAGAGAAG 2697
||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||
Sbjct 2515 GATGAAGAGACACCAAACTGGAGACATTTGTTACCAGATGGCATGGAGGATAGAGAGAAA 2574
Query 2698 GTTCTGTTAGATGAATACACATCAGTGTTAAGGGATTATAGAGAAGTAAAGAGAAAGTTA 2757
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2575 GTTCTGTTAGATGAATACACATCAGTACTAAGGGATTATAGAGAAGTAAAGAGAAAGTTA 2634
Query 2758 GGTGACGTTGAGAAAAAGAACCGGGAAGGATTCTTCGAGTTAGCATTACAGTTGAGAGAA 2817
||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct 2635 GGTGATGTTGAGAAAAAGAACCGGGAAGGATTTTTCGAGCTAGCATTACAGTTGAGAGAA 2694
Query 2818 CTCAAGAATGCTGTTGCTTACAAAGACGCAGAGATTCAGTCGTTACGCCAAAAACTCAGC 2877
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 2695 CTCAAGAATGCTGTTGCTTACAAAGACGTGGAGATTCAGTCGTTACGCCAAAAACTT-GA 2753
Query 2878 TCGCC-C-GGGAAAGATTCGCCACACCAAGTAGAACGAAATAATCAGTTGGAACATGAAC 2935
| || | ||||||||||| |||||||||| |||| ||||||| ||||||||||||||||
Sbjct 2754 -CACCACTGGGAAAGATTCACCACACCAAGGAGAAGGAAATAACCAGTTGGAACATGAAC 2812
Query 2936 AAGTACATCATGAAAGTGTGAGCATTTCACCAACTTCCAACTTTTCGGTTTCCACTACGC 2995
||| ||||||||||| |||||||||||| |||||||| |||||||||||| |||| ||||
Sbjct 2813 AAGGACATCATGAAACTGTGAGCATTTCGCCAACTTCTAACTTTTCGGTTGCCACCACGC 2872
Query 2996 CGCATCATCAATTGGGAGACATGAAGAGAACACCTGGAAGAACAAAGTCAACTGAGGTTA 3055
||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2873 CGCATCATCAAGTAGGAGATGTGAAGAGAACACCTGGAAGAACAAAGTCAACTGAGGTTA 2932
Query 3056 GGGTGAAATTTGCAGACGTTGATGACAGCCCAAGAACAAAGATTCCAACTGTGGAAGACA 3115
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2933 GGGTGAAATTTGCAGACGTTGATGACAGCCCGAGAACAAAGATTCCAACTGTGGAAGACA 2992
Query 3116 AAGTGCGTGCAGACATTGACGCGGTGTTGGAAGAGAATCTCGAGTTTTGGTTAAGATTTA 3175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2993 AAGTGCGTGCAGACATTGACGCGGTGTTGGAAGAGAATCTCGAGTTTTGGTTAAGATTTA 3052
Query 3176 GCACATCAGTACATCAGATACAGAAGTACCAAACAACGGTTCAGGATCTCAAATCAGAGC 3235
| ||||| ||||||||||||||||||||||| ||||| ||||| ||||| ||||||||||
Sbjct 3053 GTACATCGGTACATCAGATACAGAAGTACCAGACAACAGTTCAAGATCTGAAATCAGAGC 3112
Query 3236 TATCGAAACTGAGAATCGAAAGCAAGCAACAACATGAATCTCCAAGAAGTAGTAGTAATA 3295
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 3113 TATCGAAACTGAGAATTGAAAGCAAGCAACAACAGGAATCTCCAAGAAGTAGTAGTAATA 3172
Query 3296 CTGCAGTTGCATCAGAGGCCAAGCCTATCTATAGACACCTTAGAGAGATCCGAACAGAAC 3355
||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||
Sbjct 3173 CTGCAGTTGCATCAGAGGCAAAGCCTATCTATAGACACCTCAGAGAGATTCGAACAGAAC 3232
Query 3356 TACAGCTATGGCTAGAGAACAGCGCGGTTCTTAAAGACGAACTCCAGGGAAGGTATGCAT 3415
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 3233 TACAGCTATGGCTAGAGAACAGTGCGGTTCTTAAAGACGAACTCCAGGGAAGGTATGCGT 3292
Query 3416 CACTAGCTAATATCCAAGAAGAAATCGCAAGAGTCACGGCTCAATCAGGTGGCAATAAAG 3475
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3293 CATTAGCTAATATCCAAGAAGAAATCGCAAGAGTCACGGCTCAATCAGGTGGCAATAAAG 3352
Query 3476 TAAGTGATTCAGAGATTAGTGGTTACCAAGCTGCAAAGTTCCATGGAGAGATACTTAACA 3535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3353 TAAGTGATTCAGAGATTAGTGGTTACCAAGCTGCAAAGTTCCATGGAGAGATACTTAACA 3412
Query 3536 TGAAACAGGAAAACAAAAGGGTCTCAACCGAACTTCAATCAGGTCTTGATCGTGTAAGAG 3595
|||||||||| |||||||||||||| ||||||||||| || |||||||| ||||||||||
Sbjct 3413 TGAAACAGGAGAACAAAAGGGTCTCGACCGAACTTCACTCGGGTCTTGACCGTGTAAGAG 3472
Query 3596 CATTAAAAACTGAAGTGGAGAAGATTCTGAGTAAACTAGAAGAGGATCTTGGGATCTCAA 3655
|||| ||||| |||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct 3473 CATTGAAAACCGAAGTGGAGAGGATTCTAAGTAAACTAGAAGAGGATCTTGGGATCTCAA 3532
Query 3656 GTGCAACAGAAGCAAGAACAACTC-AGAGCAAGAGCTCATCGAGTGGAAGACCGAGGATT 3714
|||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||
Sbjct 3533 GTGCAACAGAAGCAAGAACAACTCCA-AGCAAGAGCTCATCAAGTGGAAGACCGAGGATT 3591
Query 3715 CCATTACGGTCATTCTTGTTCGGTGTCAAGTTAAAGAAGAATAGACAACAGAAGCAATCT 3774
||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 3592 CCATTACGGTCATTCTTGTTCGGTGTCAAGTTAAAGAAGAATAGACAGCAAAAGCAATCA 3651
Query 3775 TCATCATCTCTCTTCTCTTGTGTCAGTCCATCTCCAGGTCTGCAAAAACAGTCTAGTTAC 3834
||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 3652 GCATCATCCCTCTTCTCTTGTGTCAGTCCATCTCCAGGTCTGCATAAACAGTCTAGTTAC 3711
Query 3835 AATAGACCACCTGGAAAGCTCCCTGAATAA 3864
| ||| |||||||| |||||||||||||||
Sbjct 3712 AGTAGGCCACCTGGGAAGCTCCCTGAATAA 3741
Score = 963 bits (521), Expect = 0.0
Identities = 711/799 (89%), Gaps = 27/799 (3%)
Strand=Plus/Plus
Query 3 GACGACGACGAGGTCAAAATTTCAGTCTCTCTCAGCACGTCGCCTCACACC-TCTGCCGG 61
||||| | ||| ||| ||||| ||||||||||||||| ||||| |||| || | | ||||
Sbjct 9 GACGAGGGCGAAGTCCAAATTCCAGTCTCTCTCAGCATGTCGCTTCACGCCGT-TACCGG 67
Query 62 AACCCAATCCCTCGCCGCGTACTTTCTCCAAAACTTTACCAGAACCCAATTCCTCTCCAG 121
|||||||| |||| ||| | |||| |||||| ||||||||| ||||||||||||| || |
Sbjct 68 AACCCAATACCTCACCGAGCACTTACTCCAAGACTTTACCAAAACCCAATTCCTCGCCGG 127
Query 122 GAACCAACGGAACTTTCCGAACACCATTTCCCTTATCACTCATCACTCCAATCAAAACCC 181
||||| |||||||||||| |||||| ||||||||| | |||||||||||||||||||||
Sbjct 128 GAACCGACGGAACTTTCCCAACACCGTTTCCCTTAGCTGTCATCACTCCAATCAAAACCC 187
Query 182 TAAAATCCATCACATTATCCGATTGGTGGCTAAAAAAGAAAAGCAAAGGTCTAAGTATCA 241
|||||||| |||||||||||||||||||||||| ||||||| |||||| | | |||| |
Sbjct 188 TAAAATCCGTCACATTATCCGATTGGTGGCTAACAAAGAAAGGCAAAGATTTGTGTATTA 247
Query 242 CAGGATTCGAATCAAACGGTGGATCTGGAGTCAGACTATTTTCTTCAGGAACAATCTCAA 301
||||||||||||||| |||| ||||||||| ||||| ||||| ||||||||||||||||
Sbjct 248 AAGGATTCGAATCAAATGGTGCATCTGGAGTAAGACTGTTTTCATCAGGAACAATCTCAA 307
Query 302 AACGACATGAAAGTACCACTCTTGAAGCAATTGATGGGATTACAATTTCTATCAATGGAT 361
| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 308 AGCGACATGAAAGTACAACTCTTGAAGCAATTGATGGGATTACAATTTCTATCAATGGTT 367
Query 362 TCATCAATCGATCTCGTAGTCTAGAGAACGGTGTTTCGAATGAGGTTTGTAATCGTTTTC 421
||||||||||||||||| |||||||||| ||| |||||| ||||||||||||||||||||
Sbjct 368 TCATCAATCGATCTCGTTGTCTAGAGAATGGTATTTCGATTGAGGTTTGTAATCGTTTTC 427
Query 422 GTTTAGGGTTTCCTTATGATTGGGAAGATTACAATGTagaagaagaagaaga-gaagaag 480
|||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||
Sbjct 428 GTTTAGGGTTTCCTTATGATTGGGAAGATTACAATGAAGAAGAAGAAGA-GAAGAAGAAG 486
Query 481 aaTGT-TGTTGATATTTCGTTTGATGATATTCCAGTGAATAGGTATCAGGATCTTTATTG 539
|| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 487 AA-GAATGTTGATATTTCGTTTGATGATATTCCTGTGAATAGGTATCAGGATCTTTATTC 545
Query 540 TCTTGAGGGTTGTTTGAAAGATAAGATTTTGGATGATGTTGTTAGTAGTTTAAGAGATTT 599
||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct 546 TCTTGAGGGTTGTTTGAAAGATAAGATTTTGGACGATGTTGTTGGTAGTTTAAGAGATTT 605
Query 600 GGTTTGTCAGATATTTGATAAGGAATGTGAGAAATCAAGA-------AT-T-G--G-TG- 646
||||||||||| || |||||||| |||||||||||||||| || | | | ||
Sbjct 606 GGTTTGTCAGAAATCTGATAAGGCATGTGAGAAATCAAGAGTTGGTGATGTTGATGATGA 665
Query 647 -G-TGATGATG--G-TGA---GAGTTTGGTTTCGAGGGTTGTGGGAGTGAAGACTAGAGG 698
| |||||||| | ||| |||||||||||||||||||||||||||||||||||||||
Sbjct 666 TGATGATGATGATGATGATAAGAGTTTGGTTTCGAGGGTTGTGGGAGTGAAGACTAGAGG 725
Query 699 TATGCTTAGACGGAGAGAAGAGTATGAAGCTTCTATCGGGAAAAGAGATGCGACGATCTC 758
|||||||||| ||||||||||||||||||||||||| |||||||||| |||||| || ||
Sbjct 726 TATGCTTAGAAGGAGAGAAGAGTATGAAGCTTCTATTGGGAAAAGAGTTGCGACCATGTC 785
Query 759 TGGGGAAAGAGCTGTGACA 777
|||| |||||| |||||||
Sbjct 786 TGGGAAAAGAGTTGTGACA 804
> AT1G09720.1 | Symbols: | Kinase interacting (KIP1-like) family
protein | chr1:3144438-3147303 REVERSE LENGTH=2787
Length=2787
Score = 538 bits (291), Expect = 2e-151
Identities = 737/941 (78%), Gaps = 76/941 (8%)
Strand=Plus/Plus
Query 999 ATGTTGCAGAGAGCAGCGAGCAATGCGTATTCATGGTGGTGGGCAAGTCATATCCGTACA 1058
|||||||||||||||||||||||||||||||||||||||||||| || || || || |||
Sbjct 1 ATGTTGCAGAGAGCAGCGAGCAATGCGTATTCATGGTGGTGGGCCAGCCACATACGCACA 60
Query 1059 AAGCAATCCAAATGGCTCGAACACAATCTTCA-G----GGT--AGAA--TA---TACAC- 1105
|| |||||||||||||||||||||||||| || | || |||| || |||||
Sbjct 61 AAACAATCCAAATGGCTCGAACACAATCTCCAAGATATGGAGGAGAAGGTAAAGTACACA 120
Query 1106 -TTAAGATCATAGATGAAGATGGAGACACTTTTGCTAAAAGAGCTGAGATGTATTACCGT 1164
|||||||||| |||| ||||||||||| ||||||||||||||| |||||||||||||||
Sbjct 121 CTTAAGATCATTGATGGAGATGGAGACAGTTTTGCTAAAAGAGCGGAGATGTATTACCGT 180
Query 1165 AAAAGGCCGGAGATTGTTAATTTCGTGGAGGAAGCTTTTCGGTCATACCGTGCCTTAGCT 1224
|||||||| |||||||| ||||||||||| ||||| ||||| ||||||||||| |||||
Sbjct 181 AAAAGGCCAGAGATTGTCAATTTCGTGGAAGAAGCATTTCGTTCATACCGTGCTTTAGCA 240
Query 1225 GAACGTTATGATCATTTATCTAGAGAGCTTCAAAGCGCAAACCGCACAATCGCCACAGCT 1284
||||| ||||||||||| || | ||| |||||||| || || | | ||||| || |||
Sbjct 241 GAACGCTATGATCATTTGTCCACAGAACTTCAAAGTGCCAATCATATGATCGCTACCGCT 300
Query 1285 TTCCCTGAACATGTTC-AGTTTCCT-TTGGAGGATGATAGTGATGAAAATGAAGATTATG 1342
|||||||||||||||| | |||||| ||| | ||||| | |||| |||| ||| |||
Sbjct 301 TTCCCTGAACATGTTCCA-TTTCCTCTTGTTG-ATGAT-G--ATGACGATGATGATGATG 355
Query 1343 AAGGGAATCCGC--GTAAACCGCCTAAGCATCTTCATCTTATTCCCAAG-GGAA-TCAAC 1398
| ||||| | | ||||| ||||||||||||||||| ||||||| | |||| | |||
Sbjct 356 AT---AATCC-CAAG-AAACCACCTAAGCATCTTCATCTCATTCCCA-GTGGAACT-AAC 408
Query 1399 ATACCTGAAGTTCCGGATATTCCAAAGAAGAAAGATTTCAGGAGTCAGTCTATGATG-T- 1456
||||| |||| || || |||| ||||| | || || || ||| || ||| ||||| |
Sbjct 409 ATACCACAAGTCCCTGAGGTTCCCAAGAA-AGAG-TT-CAAGAGCCAATCTCTGATGGTG 465
Query 1457 T-GTCTAGAAAAGGA-CCAGCTGGTCTGAAAAGGACAGTATCTTCTGCACAAGCAAAGAG 1514
| ||| ||||| ||| || | || | || |||| | || | | || ||
Sbjct 466 TTGTCGAGAAA-GGAACCTGGTGTTTTGCAAAG-----T-TCG---G-A-AA-CATCTT- 511
Query 1515 GGAAGCGGCGATTG-TGCGTTCGGGATTGAGTAAAGAAGAGGGTTTGGAAGAGATTGATA 1573
| || |||| || |||| |||||||||| |||||||| ||||| ||||| ||||
Sbjct 512 -----CTGC-ATTGGTGAGTTCCGGATTGAGTAGAGAAGAGGCATTGGAGGAGATCGATA 565
Query 1574 AGCTTCAGAAGGGGATCTTGGCGTTGCAGACCGAGAAAGAGTTTGTGAGGAGCTCATATG 1633
|| | || ||||||||||||| | ||||||| ||||| ||||||||||| || || ||||
Sbjct 566 AGATCCATAAGGGGATCTTGGTGCTGCAGACTGAGAAGGAGTTTGTGAGAAGTTCTTATG 625
Query 1634 AACAGTCTTATGAGAGGTATTGGGATTTGGAGAATGAAGT-GACTGAGATGCAGAAGAGC 1692
| ||||| ||||| ||||||||| |||||||||||||||| || || |||||||||||
Sbjct 626 AGCAGTCCTATGATAGGTATTGGAATTTGGAGAATGAAGTTGAA-GAAATGCAGAAGAGA 684
Query 1693 GTTTGTAACTTACAAGATGAGTTTGGTCTTGGTGCTTCGATTGATGATAGCGATGCTAGG 1752
||||| | ||||||||||||||||| |||||| ||| || ||| | || ||||||
Sbjct 685 GTTTGCAGTTTACAAGATGAGTTTGGGGTTGGTGGAGAGATCGAAGATGGTGAAGCTAGG 744
Query 1753 AC-CTTGATGGCGAGCACTGCGT-TGAGTTCTTGTAAGGACACACTTGCTAAGCTTGAGG 1810
|| || | |||| | | |||| | | || |||||||| || ||| |||||||||||||||
Sbjct 745 ACGCTGG-TGGCAACCGCTGC-TCTAAGCTCTTGTAAAGAGACAATTGCTAAGCTTGAGG 802
Query 1811 AGAAACAGAGGAAATCGGT-TGAAGAAGC-GGAAATTGAGAAAGGAA-GGATT-ACTACT 1866
||| |||| | || | |||||| || |||| ||||||| |||| ||||| | ||||
Sbjct 803 AGACGCAGAAGCGATTT-TCTGAAGACGCCGGAA-TTGAGAA-GGAAAGGATTGA-TACT 858
Query 1867 GCGAA-AGAACGGTTTTATGCATTGAGGAACAAGTTTGAGA 1906
|| || |||| ||| | | ||| ||| ||| ||||||||||
Sbjct 859 GC-AACAGAAAGGTGTGAAGCACTGAAGAAAAAGTTTGAGA 898
Score = 207 bits (112), Expect = 5e-52
Identities = 199/240 (83%), Gaps = 9/240 (4%)
Strand=Plus/Plus
Query 2652 AAACTGGAGGCAGTTGTTA--C-CTGATGGCATGGAGGATAGAGAGAAGGTTCTGTTAGA 2708
||||||||||||||||||| | | ||||||||||||||||||||||||||||| || ||
Sbjct 1587 AAACTGGAGGCAGTTGTTACCCGCAGATGGCATGGAGGATAGAGAGAAGGTTCTATTGGA 1646
Query 2709 TGAATACACATCAGTGTTAAGGGATTATAGAGAAGTAAAGAGAAAGTT-AGGTGACGTTG 2767
||||||| ||||||| |||| || ||||||||||| ||||||||||| || ||| ||||
Sbjct 1647 TGAATACTCATCAGTACTAAGAGACTATAGAGAAGTGAAGAGAAAGTTGAG-TGAAGTTG 1705
Query 2768 AGAAAAAGAACCGGGAAGGATTCTTCGAGTTAGCATTACAGTTGAGAGAACTCAAGAATG 2827
|||| |||||||| || || ||||| ||| | ||||| |||||| |||| ||||||||||
Sbjct 1706 AGAAGAAGAACCGTGATGGCTTCTTTGAGCTGGCATTGCAGTTGCGAGAGCTCAAGAATG 1765
Query 2828 CTGTTGCTTACAAAGACGCAGAGATTCAGT-CGTTACGCCAAAAACTCAGC-TCGCCCGG 2885
||||| ||| | |||||| || |||| | | |||| ||| |||| ||| | ||||||
Sbjct 1766 CTGTTTCTTGCGAAGACGTGGATTTTCATTTC-TTACACCAGAAAC-CAGAATTGCCCGG 1823
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 192490560291
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5