BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475454
Length=1180
Score E
Sequences producing significant alignments: (Bits) Value
AT1G57943.1 | Symbols: ATPUP17, PUP17 | purine permease 17 | ch... 1664 0.0
AT1G57990.1 | Symbols: ATPUP18, PUP18 | purine permease 18 | ch... 1208 0.0
AT1G57980.1 | Symbols: | Nucleotide-sugar transporter family p... 1181 0.0
> AT1G57943.1 | Symbols: ATPUP17, PUP17 | purine permease 17 |
chr1:21437602-21438889 REVERSE LENGTH=1197
Length=1197
Score = 1664 bits (901), Expect = 0.0
Identities = 1069/1149 (93%), Gaps = 16/1149 (1%)
Strand=Plus/Plus
Query 41 TTCAGAATCCAGAACC-GTACCAAAGCTTGAGTCCAAGAAGATCATTGAAGCTAAAACAA 99
|||||||||||||||| | |||||| |||||||||||||||||| ||| |||||||||||
Sbjct 56 TTCAGAATCCAGAACCAG-ACCAAATCTTGAGTCCAAGAAGATCGTTGGAGCTAAAACAA 114
Query 100 AGAAAATGGTGGATCTCTGTTTCTTTATGTATTTTCTTAGTCTTGCTCGGTGATTCTCTC 159
|||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||
Sbjct 115 AGAAAATGGTGGATCTCTGTTTCTTTATGTCTTTTCTTAGTCTTACTCGGAGATTCTCTC 174
Query 160 GTCATGCTTCTCTTGAACTTCTTCTACGTTCAAATGGAGCAAGACTTTC-ATGAA-ATTT 217
|||||||||||||||||||||||||| || |||||| |||||||| || | ||| | |
Sbjct 175 GTCATGCTTCTCTTGAACTTCTTCTATGTCCAAATGAAGCAAGACCGTCGA-GAAGA-GT 232
Query 218 ATGACCAAGATCTGCAATACAAAGGAACATGGACGCAAGCTCTGATCCAAAACGCTGCGT 277
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 233 ATGACCAAGATCTACAATATAAAGGAACATGGACGCAAGCTCTGATCCAAAACGCTGCGT 292
Query 278 TTCCTATCCTCATTCCTCTCTTCTTCATTTTCCCTAAACCAAAACAAAACCTTGAAACCA 337
||||||| ||||| |||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct 293 TTCCTATTCTCATCCCTCTCTTTTTCATTTTCCCTAAACCAAAACAACACCTTGAAACCA 352
Query 338 ACAATACTAGATTCCTCTCCTTGCGTCTCTTCTTCCTTTACTTATCTCTTGGTGTTCTTG 397
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 353 ACAATACTAGTTTCCTCTCCTTGCGTCTCTTCTTCCTTTACTTATCTCTTGGTGTTCTTG 412
Query 398 TTGCTGCTCACAGCAAATTGTTTGCACTCGGCAAATTAGTCTCAAACTATGGCATCTTCA 457
|||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 413 TTGCTGCTCACAGCAAATTGTTCGCACTCGGGAAATTAGTCTCAAACTATGGCATCTTC- 471
Query 458 TG-TTGATTTCCGCAACCCAATTGATATTTACCGCTATTTTAACAGCTATCATTAACCGC 516
| ||||||||| |||| || ||||||||||||||| |||||||||| |||||||||||
Sbjct 472 TCATTGATTTCCACAACACAGTTGATATTTACCGCTGTTTTAACAGCCATCATTAACCGT 531
Query 517 TTCAAGTTTACTAGATGGATCATCATATCGATATTACTCACTATTGTGATTTACGTTCTC 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 532 TTCAAGTTTACTAGATGGATCATCATATCGATATTACTCACTATTGTGATTTACGTTCTC 591
Query 577 AGTA-TACCTGACTTTGGAGGACAGCCTCATGAGGGAGAAGAATAT-GGATACAACATCC 634
||| | |||||||||||||||||||||||||| || ||||||| | |||||||||||||
Sbjct 592 GGTACT-CCTGACTTTGGAGGACAGCCTCATGACGGCGAAGAAT-TCGGATACAACATCC 649
Query 635 AAGCTTGGTTAGCTTTCTCTGCTACGATTGCTTTCTCATTATCTCTCTGCTTAATCCAAC 694
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct 650 AAGCTTGGTTAGCTTTCTCTGCTACAATTGCTTTCTCATTATCTCTTTGCTTAATCCAAC 709
Query 695 TCGGGTTCGAGAAACTCCTGGTGAAGACAAAGAGATATGGTAACAAGAAAGTGTTTAGAA 754
|||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||
Sbjct 710 TCGGGTTCGAGAAACTCCAAGTGAAGACCAAGAGATATGGTAACGAGAAAGTGTTTAGAA 769
Query 755 TGGTCTTAGAGATGCAAATATGTGTCTCTTTTGTCGCCTCGATTATTTGTCTTGTGGGTT 814
|||||||||||||||||||||||||| |||||||||||||| || ||||||| ||||| |
Sbjct 770 TGGTCTTAGAGATGCAAATATGTGTCGCTTTTGTCGCCTCGGTTGTTTGTCTCGTGGGCT 829
Query 815 TGTTTGCAAGTGGTGAGTATAAGGAACTGAAAGGTGATAGCAAGAGGTTTAAGAAAGGAG 874
||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct 830 TGTTTGCGAGTGACGAGTATAAGGAACTGAAAGGCGATAGCAAGAGGTTTAAGAAAGGGG 889
Query 875 AAGCGTATTACGTTCTGAGTTTGGTCGGGTTGGCTTTGTCGTGGCAGGTTTGGGCGGTCG 934
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 890 AAACGTATTACGTTCTGAGTTTGGTCGGGTTGGCTTTGTCGTGGCAGGTTTGGGCGGTCG 949
Query 935 GGCTTATAGGTTTGGTGCTTTATGTTTCGGGTCTTTTTGGTGATATTGTTCATATGTGCG 994
|| | ||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |
Sbjct 950 GGATGATAGGTTTGGTGCATTATGTTTCGGGTCTTTTTGGTGATGTTGTTCATATGTGTG 1009
Query 995 CTTCACCACTTGTGGCTTTGTTTGTTGTCTTGGCATTTGATTTTATGGATGATGTGTTTA 1054
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1010 CTTCACCATTTGTGGCTTTGTTTGTTGTCTTGGCATTTGATTTTATGGATGATGTGTTTA 1069
Query 1055 GTTGGACTAGAATTGGTGCTTT-ATTAGGAACAACTTTGGCTTTGGGATCTTACTTCTAC 1113
||||| |||||||||||||||| || ||||||| |||||| || |||||||||||||||
Sbjct 1070 GTTGGCCTAGAATTGGTGCTTTGAT-AGGAACAGTTTTGGCGTTAGGATCTTACTTCTAC 1128
Query 1114 ACTCTACACAAGAGAAACAAGAAGAAGATGTCCGAACTTAATTAAAGTGA-A-CAATGTT 1171
||||| |||||||||||||||||||||||| | |||||||| ||||||| | |||||||
Sbjct 1129 ACTCTGCACAAGAGAAACAAGAAGAAGATGGCGGAACTTAACCAAAGTGAGAACAATGTT 1188
Query 1172 GAAGTTTAG 1180
|||||||||
Sbjct 1189 GAAGTTTAG 1197
Score = 67.6 bits (36), Expect = 3e-10
Identities = 38/39 (97%), Gaps = 0/39 (0%)
Strand=Plus/Plus
Query 1 ATGGAGATGTCCAAAGCTTCCAAACAGACAGCAAGACAT 39
|||||||||||||||||||||||||||||| ||||||||
Sbjct 1 ATGGAGATGTCCAAAGCTTCCAAACAGACAACAAGACAT 39
> AT1G57990.1 | Symbols: ATPUP18, PUP18 | purine permease 18 |
chr1:21441505-21442920 REVERSE LENGTH=1416
Length=1416
Score = 1208 bits (654), Expect = 0.0
Identities = 1027/1201 (86%), Gaps = 49/1201 (4%)
Strand=Plus/Plus
Query 1 ATGGAGATGTCCAAAGCTTCCAAACAGACAGCA--AGACA-TATTCAG--AATCCAGAAC 55
||||||||| || ||||||||||||||||| || ||| | | |||| ||||||||||
Sbjct 49 ATGGAGATGACCGAAGCTTCCAAACAGACAACAGCAGA-AGGA-TCAGCAAATCCAGAAC 106
Query 56 C-GTACCAAAGCTTGAGTCCAAGAAGATCATTGAAGCTAAAAC-AAAGAAAATGGTGGAT 113
| | |||||| ||||||||| |||||||| ||| ||||||||| |||| |||||||||||
Sbjct 107 CAG-ACCAAATCTTGAGTCCGAGAAGATCGTTGGAGCTAAAACAAAAG-AAATGGTGGAT 164
Query 114 CTCTGTTTCTTTATGTATTTTCTTAGTCTTGCTCGGTGATTCTCTCGTCATGCTTCTCTT 173
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 165 CTCTGTTTCTTTATGTATTTTCTTAGTCTTGCTCGGAGATTCTCTAGTCATGCTTCTCTT 224
Query 174 GAACTTCTTCTACGTTCAAATGGAGCAAGACTTTCATGA-AATTTA-TGACCAAGATCTG 231
|||||||||||| |||| || || | | | || || || || ||||||||||||
Sbjct 225 GAACTTCTTCTATGTTC-AA--GA-C-A-A---TC--GAGAAGATAGTGACCAAGATCTA 273
Query 232 CAATACAAAGGAACATGGACGCAAGCTCTGATCCAAAACGCTGCGTTTCCTA-TCCTCAT 290
|||||| |||||||||| |||||||||| ||||||||||||||||||| | | |||||
Sbjct 274 CAATACCGAGGAACATGGTTGCAAGCTCTGGTCCAAAACGCTGCGTTTCC-ACTACTCAT 332
Query 291 TCCTCTCTTCTTCATTTTCCCTAAACCAAAACAAAACCTTGAAACCAACAATACTAGATT 350
|||||| || |||||||||||| |||||||||||||| ||||||| ||||||| | ||
Sbjct 333 TCCTCTGTTTTTCATTTTCCCTTCACCAAAACAAAACCAAGAAACCACCAATACTCGTTT 392
Query 351 CCTCTCCTTGCGTCTCTTCTTCCTTTACTTATCTCTTGGTGTTCTTGTTGCTGCTCACAG 410
|||||| || |||||| |||| |||||| | |||||||||||||||||||||||||||||
Sbjct 393 CCTCTCTTTTCGTCTCATCTTACTTTACATCTCTCTTGGTGTTCTTGTTGCTGCTCACAG 452
Query 411 CAAATTGTTTGCACTCGGCAAATTAGT-CTCAAACTATGGCATCTTCATGTTGATTTCCG 469
||||||||||||||| || |||||| | | |||||| |||| |||||| | |||||||||
Sbjct 453 CAAATTGTTTGCACTTGGGAAATTA-TACGCAAACTTTGGCGTCTTCACGCTGATTTCCG 511
Query 470 CAACCCAATTGATATTTACCGCTATTTTAACAGCTATCATTAACCGCTTCAAGTTTACTA 529
| || || |||||||||||||||||||| |||| || |||||||| || ||||| || |
Sbjct 512 CGACTCAGTTGATATTTACCGCTATTTTCGCAGCCATTATTAACCGTTTTAAGTTCACCA 571
Query 530 GATGGATCATCATATCGATATTACT-CA-CTATTGTGATTTACGTTCTCAGTA-TACCTG 586
||||||| ||| |||||||| | | || | ||| ||||||| ||| || ||| | ||||
Sbjct 572 GATGGATTATCTTATCGATAAT-CGGCAGC-ATTTTGATTTATGTTTTCGGTAGT-CCTG 628
Query 587 ACTTTGGAGGACAGCCTCATGAGGGA-GAAGAATATGGATACAACATCCAAGCTTGGTTA 645
| ||||||||| ||||| |||| | ||||||| | |||| ||||||||||||||||
Sbjct 629 AATTTGGAGGAGAGCCTGATGAAA-ACGAAGAAT-TC--TACAGCATCCAAGCTTGGTTA 684
Query 646 GCTTTCTCTGCTAC-GATTGCTTTCTCATTATCTCTCTGCTTAATCCAACTCGGGTTCGA 704
||||| ||||| | | |||||||| ||||||||||||| ||| ||||||| | |||||
Sbjct 685 ACTTTCGCTGCTTCAG-TTGCTTTCGCATTATCTCTCTGTTTATTCCAACTTTGTTTCGA 743
Query 705 GAAACTCCTGGTGAAGACAAAGAGATATGGTAACAAGAAAGTGTTTAGAATGGTCTTAGA 764
|||| | |||| |||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 744 GAAAGTGTTGGTAAAGACAAAGAGATATGGTAACAAGAAAGTGTTTAGAATGGTCATAGA 803
Query 765 GATGCAAATATGTGTCTCTTTTGTCGCCTCGATTATTTGTCTTGTGGGTTTGTTTGCAAG 824
||||||||| ||||||||||||||||| || || ||||||| |||||||||||||| ||
Sbjct 804 GATGCAAATTTGTGTCTCTTTTGTCGCAACGGTTGTTTGTCTCGTGGGTTTGTTTGCGAG 863
Query 825 TGGTGAGTATAAGGAACTGAAAGGTGATAGCAAGAGGTTTAAGAAAGGAGAAGCGTATTA 884
||| ||| ||||||||||| |||| |||||| | |||||||||||||||||| |||||||
Sbjct 864 TGGCGAGAATAAGGAACTGCAAGGCGATAGCCACAGGTTTAAGAAAGGAGAAACGTATTA 923
Query 885 CGTTCTGAGTTTGGTCGGGTTGGCTTTGTCGTGGCAGGTTTGGGCGGTCGGGCTTATAGG 944
|||| |||||||| |||||||||| ||||||||||||||||||||||||||||| || ||
Sbjct 924 CGTTTTGAGTTTGATCGGGTTGGCATTGTCGTGGCAGGTTTGGGCGGTCGGGCTGATGGG 983
Query 945 TTTGGTGCTTTATGTTTCGGGTCTTTTTGGTGATATTGTTCATATGTGCGCTTCACCACT 1004
|||||||||||||||||||||| | ||||| ||| ||||||||||||| ||||||||||
Sbjct 984 TTTGGTGCTTTATGTTTCGGGTGTGTTTGGCGATGTTGTTCATATGTGTACTTCACCACT 1043
Query 1005 TGTGGCTTTGTTTGTTGTCTTGGCATTTGATTTTATGGATGATGTGTTTAGTTGGACTAG 1064
|||||||||||||||||| |||||||||||||| |||||||||| |||||||||| ||||
Sbjct 1044 TGTGGCTTTGTTTGTTGTGTTGGCATTTGATTTCATGGATGATGAGTTTAGTTGGCCTAG 1103
Query 1065 AATTGGTGCTTT-ATTAGGAACAACTT-TGGCTTTGGGATCTTACTTCTACACTCTACAC 1122
||||||| |||| || || |||| || ||||||| |||||||||||||||||||| ||
Sbjct 1104 AATTGGTACTTTGAT-AGCAACAG-TTGTGGCTTTAGGATCTTACTTCTACACTCTGCAT 1161
Query 1123 AAGAGAAACAAGAAGAAGATG-TCCGAACTTAATTAAA--GTGAACAATGTTGAAGTTTA 1179
||||||||||||||||||||| | || ||| | ||| | ||||||| |||| |||||
Sbjct 1162 AAGAGAAACAAGAAGAAGATGGTG-GAGCTTTACCAAACAGAGAACAATATTGACGTTTA 1220
Query 1180 G 1180
|
Sbjct 1221 G 1221
> AT1G57980.1 | Symbols: | Nucleotide-sugar transporter family
protein | chr1:21439232-21440805 REVERSE LENGTH=1470
Length=1470
Score = 1181 bits (639), Expect = 0.0
Identities = 1002/1169 (86%), Gaps = 58/1169 (5%)
Strand=Plus/Plus
Query 36 ACATATTCAGAATCCAGAACC-GTACCAAAG-CTTGAGTCC-AAGAAGATC-ATTGAAGC 91
|||| |||||||||| ||||| | ||| ||| |||||| || ||| | | | ||| |||
Sbjct 124 ACATGTTCAGAATCCTGAACCAG-ACC-AAGTCTTGAG-CCAAAG-ACAACTGTTGCAGC 179
Query 92 TAAAAC-AAAGAAAATGGTGGATCTCTGTTTCT-TTATGTATTTTCTTAGTCTTGCTCGG 149
|||| | |||| |||||||||||||||| |||| ||||| ||||||||||| |||| ||
Sbjct 180 TAAATCAAAAG-AAATGGTGGATCTCTG-TTCTAATATGTCTTTTCTTAGTCCTGCTTGG 237
Query 150 TGATTCTCTCGTCATGCTTCTCTTGAACTTCTTCTACGTTCAAATGGAGCAAGACTTTC- 208
|||||||| ||||| |||||||||||||||||||| |||| || || | | ||
Sbjct 238 AGATTCTCTTGTCATACTTCTCTTGAACTTCTTCTATGTTC-AA--GA-C----C-GTCG 288
Query 209 ATGAA-ATTTATGACCAAGATCTGCAATACAAAGGAACATGGACGCAAGCTCTGATCCAA 267
| ||| | | || |||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct 289 A-GAAGA-TAATAACCAAGATCTACAATACAAAGGAACATGGATGCAAGCTCTGATCCAA 346
Query 268 AACGCTGCGTTTCCTATCCTCATTCCTCTCTTCTTCATTTTCCCTAAACCAAAACAAAAC 327
|||||||| ||||| |||||||| ||||||||||||||||||||| |||||||| ||||
Sbjct 347 AACGCTGCTTTTCCAATCCTCATCCCTCTCTTCTTCATTTTCCCTTCACCAAAACCAAAC 406
Query 328 CTTGAAACCAACAATACTAGATTCCTCTCC-TTGCGTCTCTTCTTCCTTTACTTATCTCT 386
| |||||||| ||||||| | ||||||||| || |||||| |||| |||||||| || ||
Sbjct 407 CCTGAAACCATCAATACTCGCTTCCTCTCCATT-CGTCTCATCTTGCTTTACTTCTCCCT 465
Query 387 TGGTGTTCTTGTTGCTGCTCACAGCAAATTGTTTGCACTCGGCAAATTAGT-CTCAAACT 445
|||||||||||||||||||||||||||||||| |||||| || || ||| | ||||| ||
Sbjct 466 TGGTGTTCTTGTTGCTGCTCACAGCAAATTGTATGCACTTGGGAAGTTA-TACTCAAGCT 524
Query 446 ATGGCATCTTCATGTTGATTTCCGCAACCCAATTGATATTTACCGCT-ATTTTAACAGCT 504
||||| |||||||| ||||||| | |||| ||||| |||||| | ||||| ||||||
Sbjct 525 ATGGCTTCTTCATGCTGATTTCAGGGTCCCAGTTGATCTTTACC-TTGATTTTCACAGCT 583
Query 505 ATCATTAACCGCTTCAAGTTTACTAGATGGATCATCATATCGATA-TTACTCACTATTGT 563
||||||||||| ||||||||||||||||||||||||||||||||| || |||| | ||||
Sbjct 584 ATCATTAACCGTTTCAAGTTTACTAGATGGATCATCATATCGATAGTT-CTCATTCTTGT 642
Query 564 GATTTACG-TTCTCAGT-ATACCTG-ACTTTGGAGGACAGCCTCATGAGGGAGAA-GAAT 619
|| || | || | || | |||| | ||| |||| ||||| |||| | || |||
Sbjct 643 GAGCTATGCTT-TTGGTGGT-CCTGTA-TTTTCAGGAGAGCCTGATGA---A-AATGAAC 695
Query 620 ATGGATACAACATCCAAGCTTGGTTAGCTTTCTCTGCTACGA-TTGCTTTCTCATTATCT 678
|| ||| |||||||||||||||| ||||| ||||| | | |||||||| ||||||||
Sbjct 696 ATTTCTACGGCATCCAAGCTTGGTTAACTTTCGCTGCTTC-AGTTGCTTTCGCATTATCT 754
Query 679 CTCTGCTTAATCCAACTCGGGTTCGAGAAACTCCTGGTGAAGACAAAGAGATATGGTAAC 738
||||| ||| ||||||| | ||||||||||| ||||||||||||||||||||||||||
Sbjct 755 CTCTGTTTAGTCCAACTTAGTTTCGAGAAACTGTTGGTGAAGACAAAGAGATATGGTAAC 814
Query 739 AAGAAAGTGTTTAGAATGGTCTTAGAGATGCAAATATGTGTCTCTTTTGTCGCCTCGATT 798
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct 815 AAGAAAGTGTTTAGAATGGTCTTAGAGATGCAAATATGTGTCTCTTCTGTCGCCTCGGTT 874
Query 799 ATTTGTCTTGTGGGTTTGTTTGCAAGTGGTGAGTATAAGGAACTGAAAGGTGATAGCAAG 858
||||||| || ||||||||||| ||||||||||||||||| |||||||| |||||| ||
Sbjct 875 GTTTGTCTAGTTGGTTTGTTTGCGAGTGGTGAGTATAAGGAGCTGAAAGGCGATAGCGAG 934
Query 859 AGGTTTAAGAAAGGAGAAGCGTATTACGTTCTGAGTTTGGTCGGGTTGGCTTTGTCGTGG 918
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 935 AGGTTTAAGAAAGGAGAAACGTATTACGTTCTGAGTTTGGTCGGGTTGGCTTTGTCGTGG 994
Query 919 CAGGTTTGGGCGGTCGGGCTTATAGGTTTGGTGCTTTATGTTTCGGGTCTTTTTGGTGAT 978
|||||||||||||||||||| |||||||||||||||||||||||| || ||||| || ||
Sbjct 995 CAGGTTTGGGCGGTCGGGCTGATAGGTTTGGTGCTTTATGTTTCGAGTGTTTTTAGTAAT 1054
Query 979 ATTGTTCATATGTGCGCTTCACCACTTGTGGCTTTGT-TTGTTGTCTTGGCATTTGATTT 1037
|||||||||||||| |||||||||||| ||||||| | ||||||| ||||||||||||||
Sbjct 1055 ATTGTTCATATGTGTGCTTCACCACTTATGGCTTT-TATTGTTGTGTTGGCATTTGATTT 1113
Query 1038 TATGGATGATG-TGTTTAGTTGGACTAGAATTGGTGCTTT-ATTAGGAACAACT-TTGGC 1094
||| ||||||| | ||||||||| |||||||||||||||| || |||| || | |||||
Sbjct 1114 TATCGATGATGAT-TTTAGTTGGCCTAGAATTGGTGCTTTGAT-AGGATCAG-TATTGGC 1170
Query 1095 TTTGGGATCTTACTTCTACACTCTACACAAGAGAAACAAGAAGAAGATG-TCCGAACTTA 1153
||| |||||||||||||||||||| ||||| |||||||||||||||||| | ||| |||
Sbjct 1171 TTTAGGATCTTACTTCTACACTCTGCACAAAAGAAACAAGAAGAAGATGGTG-GAATTTA 1229
Query 1154 ATTAAAGTGA-A-CAATGTTGAAGTTTAG 1180
| ||||||| | |||||| |||||||||
Sbjct 1230 ACCAAAGTGAGAACAATGTAGAAGTTTAG 1258
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 57931428930
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5