BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475455
Length=1829
Score E
Sequences producing significant alignments: (Bits) Value
AT1G57870.3 | Symbols: SK42 | shaggy-like kinase 42 | chr1:2143... 2316 0.0
AT1G09840.1 | Symbols: ATSK41, SK41 | shaggy-like protein kinas... 1572 0.0
AT5G14640.1 | Symbols: ATSK13, SK13 | shaggy-like kinase 13 | c... 422 7e-117
> AT1G57870.3 | Symbols: SK42 | shaggy-like kinase 42 | chr1:21431051-21436103
REVERSE LENGTH=1867
Length=1867
Score = 2316 bits (1254), Expect = 0.0
Identities = 1439/1525 (94%), Gaps = 26/1525 (2%)
Strand=Plus/Plus
Query 99 GAAAAAGAAGTTGAGATCATCGAATGTGTGATGTTTAATTTACCGTTCAAGTGATTGATC 158
|||||||||| |||||||| |||| ||||| |||| ||| |||||||||||||||||
Sbjct 192 GAAAAAGAAG--AAGATCATCAAATGCGTGATTTTTACTTTTCCGTTCAAGTGATTGAT- 248
Query 159 CAA-GGAACATAAGCAACAAGAGATCAGAGCACTCACTTATTGCTA--TC-T--T-C--- 208
||| |||||||||||| | ||||| || | |||||| ||||| ||| || | | |
Sbjct 249 CAAGGGAACATAAGCAGCTAGAGACCACACCACTCAGTTATTTCTATCTCATAGTGCTTG 308
Query 209 T--A----CAAGATATAAGAATGTGCTCGGTGGTTCTATGAATATATAGGAAGACTGGTG 262
| | |||| |||||||||||||||||||||||||||||||||| ||| |||||
Sbjct 309 TGGATGTTCAAGCTATAAGAATGTGCTCGGTGGTTCTATGAATATAT----AGATTGGTG 364
Query 263 GTTTGATGGGATGGGACACCTAATTGCTAAGGATTGTGGTGTTATCAATTACTAGTACGT 322
||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||
Sbjct 365 TTTTGATGGGATGGGACACCAAATTGCTAAGGTTTATGGTGTTATCAATTACTAGTACGT 424
Query 323 GTTATCTTCAGAAC-A--ACCACGATGGAATCTCATCTGGGAAATGGAGTGGGCAGTTCG 379
||||||||| |||| | ||||| |||||||||||||||||||||||||| |||||||||
Sbjct 425 GTTATCTTCCGAACAACCACCACCATGGAATCTCATCTGGGAAATGGAGTAGGCAGTTCG 484
Query 380 AGATCTGCCAAAAATATAAAGAACACTTCTAGTTCAGTTGATTGGTTGAGCAGAGATATG 439
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 485 AGATCTGCCAAAAATACAAAGAACACTTCTAGTTCAGTTGATTGGTTGAGCAGAGATATG 544
Query 440 CTTGAGATGAAGATAAGGGACAAGACAGAGGCTGATGAGGACAGAGACAGTGAACCAGAT 499
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 545 CTTGAGATGAAGATAAGGGACAAGACAGAGGCTGATGAGGAGAGAGACAGTGAACCAGAT 604
Query 500 TTCATTGATGGGGTTGGTGCAGAACCTGGTCATGTGATCAGAACTACACTCCGTGGACGA 559
|||||||||| ||||||||||||||||| |||||||||| ||||||||||| |||||||
Sbjct 605 ATCATTGATGGAGTTGGTGCAGAACCTGGCCATGTGATCACAACTACACTCCCTGGACGA 664
Query 560 AATGGTCAATCAAGACAGACAGTCAGTTACATAGCAGAACACGTAGTTGGAACTGGTTCC 619
||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 665 AATGGTCAATCAAGACAGACAGTCAGTTACATAGCAGAACACGTAGTCGGGACTGGTTCA 724
Query 620 TTTGGAATGGTTTTCCAAGCTAAATGCAGAGAAACTGGGGAGGTTGTTGCCATCAAAAAG 679
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 725 TTCGGAATGGTTTTCCAAGCTAAATGCAGAGAAACTGGGGAGGTTGTTGCCATCAAAAAA 784
Query 680 GTTCTACAAGACAAGCGCTACAAGAACAGGGAATTACAAATTATGCAGATGCTAGACCAT 739
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 785 GTTCTACAAGACAAGCGTTACAAGAACAGAGAATTACAAATTATGCAGATGCTAGACCAT 844
Query 740 CCGAATGTTGTTTGTTTAAAGCATAGCTTCTATTCAAGAACAGAAAATGAAGAGGTTTAT 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 845 CCGAATGTTGTTTGTTTAAAGCATAGCTTCTATTCAAGAACAGAAAATGAAGAGGTTTAT 904
Query 800 CTAAATCTTGTCCTTGAATTTGTTCCCGAGACTGTCAATCGTACTGCCAGAAGCTACAGT 859
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 905 CTAAATCTTGTCCTTGAGTTTGTTCCCGAGACTGTCAATCGTACTGCCAGAAGCTACAGT 964
Query 860 AGAATGAACCAGCTGATGCCATTGATATATGTCAAACTCTACGCTTATCAGATTTGCAGG 919
|||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct 965 AGAATGAACCAGCTGATGCCATTGATATATGTCAAACTCTACACTTACCAGATTTGCAGG 1024
Query 920 GGGCTTGCTTACCTTCATAATTGCTGTGGTCTTTGTCACCGGGATATTAAGCCCCAAAAC 979
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 1025 GGGCTTGCTTACCTTCATAATTGCTGTGGTCTTTGTCACCGTGATATAAAGCCCCAAAAC 1084
Query 980 CTGCTAGTGAATCCACACACACATCAGCTAAAAATTTGTGATTTTGGGAGTGCAAAAGTG 1039
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1085 CTGCTAGTGAATCCACACACACATCAGCTGAAAATTTGTGATTTTGGGAGTGCAAAAGTG 1144
Query 1040 TTGGTGAAAGGAGAACCCAATATTTCTTACATTTGTTCAAGATACTATCGTGCCCCAGAG 1099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1145 TTGGTGAAAGGAGAACCCAATATTTCTTACATTTGTTCAAGATACTATCGTGCCCCAGAG 1204
Query 1100 CTCATTTTTGGAGCCACTGAGTACACAACTGCAATAGACATATGGTCCACAGGTTGTGTG 1159
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1205 CTCATTTTTGGAGCCACCGAGTACACAACTGCAATAGACATATGGTCCACAGGTTGTGTG 1264
Query 1160 ATGGCTGAACTGCTGCTTGGACAGCCTCTGTTTCCTGGCGAAAGTGGAGTCGACCAACTT 1219
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1265 ATGGCTGAACTGCTGCTTGGACAGCCTCTGTTTCCTGGCGAAAGTGGAGTCGATCAACTT 1324
Query 1220 GTTGAAATCATTAAGGTTTTGGGTACACCAACAAGGGAGGAGATCAAATGCATGAATCCA 1279
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1325 GTTGAAATCATAAAGGTTTTGGGTACACCAACAAGGGAGGAGATCAAATGCATGAATCCA 1384
Query 1280 AACTACACAGAATTTAAATTTCCCCAGATAAAACCTCATCCTTGGCACAAGGTTTTCCAA 1339
||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 1385 AACTACACAGAATTTAAATTTCCTCAGATAAAACCTCATCCTTGGCACAAGGTATTCCAG 1444
Query 1340 AAACGTTTGCCACCTGAAGCAGTAGATCTTCTTTGTAGGTTCTTCCAGTATTCTCCTAAT 1399
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1445 AAACGTCTGCCACCTGAAGCAGTAGATCTTCTTTGTAGGTTCTTCCAGTATTCTCCTAAT 1504
Query 1400 TTGAGATGCACAGCGGTGGAAGCTTGTATCCATCCGTTCTTTGATGAGCTAAGAGACCCA 1459
|||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 1505 TTGAGATGTACAGCGGTGGAAGCTTGTATCCACCCTTTCTTTGATGAGCTAAGAGACCCA 1564
Query 1460 AACGCTCGTCTTCCAAACGGCCGGCCACTTCCTCCACTTTTCAATTTTAAACCGCAAGAG 1519
|| |||||||| ||||||||||||||||||||||| || |||||||||||||| |||||
Sbjct 1565 AATGCTCGTCTGCCAAACGGCCGGCCACTTCCTCCGCTATTCAATTTTAAACCACAAGAA 1624
Query 1520 CTCTCTGGTATCCCTCCTGAAACCGTGGACCGGCTTGTCCCAGAACATGCCCGTAAGCAG 1579
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 1625 CTCTCTGGTATCCCTCCTGAAACTGTGGACCGACTTGTCCCAGAACATGCCCGTAAGCAG 1684
Query 1580 AACCACTTCATGGCATTACACTCGT 1604
|||||||||||||||||||||||||
Sbjct 1685 AACCACTTCATGGCATTACACTCGT 1709
Score = 113 bits (61), Expect = 5e-24
Identities = 86/97 (89%), Gaps = 6/97 (6%)
Strand=Plus/Plus
Query 1735 GTGCTTGCGCATCCTTTGTTGTGTCGAAGTG-GGAATGCGTACAATACAACACTACTTTG 1793
|||||||||||||| ||| | || |||||| || ||||||| |||||||||||||||||
Sbjct 1708 GTGCTTGCGCATCCCTTG-T-CGT-GAAGTGAGG-ATGCGTAAAATACAACACTACTTTG 1763
Query 1794 CTACATA-ATGATATAGAGGAACATACTTACATTTGC 1829
|| ||| |||||||||||||||||||||||||||||
Sbjct 1764 TTAGATATATGATATAGAGGAACATACTTACATTTGC 1800
> AT1G09840.1 | Symbols: ATSK41, SK41 | shaggy-like protein kinase
41 | chr1:3195824-3200279 REVERSE LENGTH=1899
Length=1899
Score = 1572 bits (851), Expect = 0.0
Identities = 1196/1362 (88%), Gaps = 26/1362 (2%)
Strand=Plus/Plus
Query 264 TTTGATGGGATGGGACACC---TAATTGCTA-AGGATTGTGGTGTTATCAATTAC---TA 316
||||||||||||||||||| ||| | | || || || || |||||||||| ||
Sbjct 257 TTTGATGGGATGGGACACCAAGAAATCACCATGGGTTTATGATGCTATCAATTACTAGTA 316
Query 317 GTACGTGTTATCTTCAGAACA-ACCA-CGATGGAAT-CTCAT---CTGGGAAATGGAGTG 370
||||||||||||||| ||| | | | | |||| || ||| | ||||||||||||||
Sbjct 317 GTACGTGTTATCTTCTGAATATA-TATC-ATGGCATCCTC-TGGACTGGGAAATGGAGTA 373
Query 371 GGCAGTTCGAGATCTGCCAAAAATATAAAGAACACTTCTAGTTCAGTTGATTGGTTGAGC 430
|||| |||||||||||||||| | |||||| | |||||||||| || |||||||||| |
Sbjct 374 GGCACTTCGAGATCTGCCAAAGGTTTAAAGAGCTCTTCTAGTTCTGTCGATTGGTTGACC 433
Query 431 AGAGATAT-GCTTGAGATGAAGATAAGGGAC-AAGACAGAGGCTGATGAGGACAGAGACA 488
|||||| | || ||||| || |||||||||| ||| |||| | ||||| || ||||| |
Sbjct 434 AGAGATTTGGC-TGAGACGAGGATAAGGGACAAAG-TAGAGACCGATGATGAGAGAGATA 491
Query 489 GTGAACCAGAT-TTCATTGATGGGGTTGGTGCAGAACCTGGTCATGTGATCAGAACTACA 547
||||||||||| || |||||||||| |||||| || |||||||||||||| ||||| |||
Sbjct 492 GTGAACCAGATATT-ATTGATGGGGCTGGTGCTGAGCCTGGTCATGTGATTAGAACCACA 550
Query 548 CTCCGTGGACGAAATGGTCAATCAAGACAGACAGTCAGTTACATAGCAGAACACGTAGTT 607
|||||||| |||||||||||||||||||||||||||||||||||| ||||||| || |||
Sbjct 551 CTCCGTGGTCGAAATGGTCAATCAAGACAGACAGTCAGTTACATATCAGAACATGTTGTT 610
Query 608 GGAACTGGTTCCTTTGGAATGGTTTTCCAAGCTAAATGCAGAGAAACTGGGGAGGTTGTT 667
|| |||||||||||||| |||||||||||||||||||| || ||||||||||||||||||
Sbjct 611 GGTACTGGTTCCTTTGGCATGGTTTTCCAAGCTAAATGTAGGGAAACTGGGGAGGTTGTT 670
Query 668 GCCATCAAAAAGGTTCTACAAGACAAGCGCTACAAGAACAGGGAATTACAAATTATGCAG 727
|||||||| ||||||||||||||||| ||||||||||||||||| ||||||| ||||||
Sbjct 671 GCCATCAAGAAGGTTCTACAAGACAAACGCTACAAGAACAGGGAGCTACAAATAATGCAG 730
Query 728 ATGCTAGACCATCCGAATGTTGTTTG-TTTAAAGCATAGCTTCTAT-TCAAGAACAGAAA 785
|||||||||||||| |||| ||| | ||||||||||||||| | | ||||||||||| |
Sbjct 731 ATGCTAGACCATCCCAATGCCGTT-GCTTTAAAGCATAGCTTTT-TCTCAAGAACAGACA 788
Query 786 ATGAAGAGGTTTATCTAAATCTTGTCCTTGAATTTGTTCCCGAGACTGTCAATCGTACTG 845
| |||||||||||| | |||||||||||||||||||| || ||||| ||||||||| ||
Sbjct 789 ACGAAGAGGTTTATTTGAATCTTGTCCTTGAATTTGTGCCTGAGACCGTCAATCGTGTTG 848
Query 846 CCAGAAGCTACAGTAGAATGAACCAGCTGATGCCATTGATATATGTCAAACTCTACGCTT 905
| ||||| || ||||| | |||||||||||||||||||||||||| ||||||||| | |
Sbjct 849 CAAGAAGTTATAGTAGGACAAACCAGCTGATGCCATTGATATATGTTAAACTCTACACCT 908
Query 906 ATCAGATTTGCAGGGGGCTTGCTTACCTTCATAATTGCTGTGGTCTTTGTCACCGGGATA 965
||||||||||||||| |||||||||| | ||||||| || ||||||||||||||| ||||
Sbjct 909 ATCAGATTTGCAGGGCGCTTGCTTACATCCATAATTCCTTTGGTCTTTGTCACCGTGATA 968
Query 966 TTAAGCCCCAAAACCTGCTAGTGAATCCACACACACATCAGCTAAAAATTTGTGATTTTG 1025
| ||||| ||||||||||| ||||| |||||||| |||||||||||||| |||||||| |
Sbjct 969 TCAAGCCTCAAAACCTGCTGGTGAACCCACACACGCATCAGCTAAAAATATGTGATTTCG 1028
Query 1026 GGAGTGCAAAAGTGTTGGTGAAAGGAGAACCCAATATTTCTTACATTTGTTCAAGATACT 1085
||||||||||||||||||| ||||||||||||||| |||||||||| ||||| |||||||
Sbjct 1029 GGAGTGCAAAAGTGTTGGTAAAAGGAGAACCCAATGTTTCTTACATCTGTTCTAGATACT 1088
Query 1086 ATCGTGCCCCAGAGCTCATTTTTGGAGCCACTGAGTACACAACTGCAATAGACATATGGT 1145
||||||| ||||| ||||||||||| |||| ||| |||||||||||||| || |||||||
Sbjct 1089 ATCGTGCTCCAGAACTCATTTTTGGTGCCAGTGAATACACAACTGCAATTGATATATGGT 1148
Query 1146 CCACAGGTTGTGTGATGGCTGAACTGCTGCTTGGACAGCCTCTGTTTCCTGGCGAAAGTG 1205
|||| |||||||||||||| |||||||| ||||||||||||||||||||||| || || |
Sbjct 1149 CCACTGGTTGTGTGATGGCCGAACTGCTTCTTGGACAGCCTCTGTTTCCTGGTGAGAGCG 1208
Query 1206 GAGTCGACCAACTTGTTGAAATCATTAAGGTTTTGGGTACACCAACAAGGGAGGAGATCA 1265
|||| || || ||||||||||||||||||||||| ||||||||||||||||| || ||||
Sbjct 1209 GAGTTGATCAGCTTGTTGAAATCATTAAGGTTTTAGGTACACCAACAAGGGAAGAAATCA 1268
Query 1266 AATGCATGAATCCAAACTACACAGAATTTAAATTTCCCCAGATAAAACCTCATCCTTGGC 1325
| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| ||||
Sbjct 1269 AGTGCATGAATCCAAACTATACAGAATTTAAGTTTCCGCAGATAAAACCTCATCCATGGC 1328
Query 1326 ACAAGGTTTTCCAAAAACGTTTGCCACCTGAAGCAGTAGATCTTCTTTGTAGGTTCTTCC 1385
||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 1329 ACAAGGTGTTCCAAAAACGTTTGCCACCAGAAGCAGTTGATCTTCTTTGTAGGTTCTTCC 1388
Query 1386 AGTATTCTCCTAATTTGAGATGCACAGCGGTGGAAGCTTGTATCCATCCGTTCTTTGATG 1445
| ||||| || ||||||||||| ||||| |||||||||||||||||||||| |||||||
Sbjct 1389 AATATTCCCCCAATTTGAGATGTACAGCTTTGGAAGCTTGTATCCATCCGTTATTTGATG 1448
Query 1446 AGCTAAGAGACCCAAACGCTCGTCTTCCAAACGGCCGGCCACTTCCTCCACTTTTCAATT 1505
||||||| ||||||||| |||||||||| || ||||| |||||||||||||||||||| |
Sbjct 1449 AGCTAAGGGACCCAAACACTCGTCTTCCCAATGGCCGACCACTTCCTCCACTTTTCAACT 1508
Query 1506 TTAAACCGCAAGAGCTCTCTGGTATCCCTCCTGAAACCGTGGACCGGCTTGTCCCAGAAC 1565
|||||||||||||||| ||||| || |||||||||| |||| || ||||||||||||| |
Sbjct 1509 TTAAACCGCAAGAGCTATCTGGCATACCTCCTGAAATCGTGAACAGGCTTGTCCCAGAGC 1568
Query 1566 ATGCCCGTAAGCAGAACCACTTCATGGCATTACACTCGTAAG 1607
|||||||||||||||||| ||||||||| || || |||||||
Sbjct 1569 ATGCCCGTAAGCAGAACCTCTTCATGGCTTTGCATTCGTAAG 1610
> AT5G14640.1 | Symbols: ATSK13, SK13 | shaggy-like kinase 13 |
chr5:4719077-4722279 REVERSE LENGTH=1719
Length=1719
Score = 422 bits (228), Expect = 7e-117
Identities = 745/990 (75%), Gaps = 54/990 (5%)
Strand=Plus/Plus
Query 559 AAATGGTCAATC-AAGACAGA-CAGTCAGTTACATAGCAGAACACGTAGTTGGAAC-TGG 615
||||||||| | || ||||| || | ||||| || ||||| | | | ||||| || ||
Sbjct 405 AAATGGTCAGCCTAA-ACAGACCA-TAAGTTATATGGCAGAGCGCATCGTTGG-ACAAGG 461
Query 616 TTCCTTTGGAATGGTTTTCCAAGCTAAATGCAGAGAAACTGGGGAGGTTGTTGCCATCAA 675
||| |||||||| ||||| || || || || |||||| ||||| |||||| |||||
Sbjct 462 TTCTTTTGGAATCGTTTTTCAGGCCAAGTGTTTAGAAACGGGGGAAACTGTTGCAATCAA 521
Query 676 -AAAGGTTCTACAAGACAAGCGCTACAAGAA-CAGGGAATTACAAATTATGCAG-ATGCT 732
||| ||| | ||||||||| | |||||||| | |||| | || | |||| | | ||
Sbjct 522 GAAA-GTTTTGCAAGACAAGAGATACAAGAATC-GGGAGCTGCAGACAATGC-GTCTTCT 578
Query 733 AGACCATCCGAATGTTGTTTGTTTAAAGCATAGCTTCTAT-TCAA-GAACAGAAAATGAA 790
|| || || |||||||| | | |||||| | || | | |||| | || ||||| ||
Sbjct 579 TGATCACCCTAATGTTGTATCCCTCAAGCATTG-TTTTTTCTCAACG-ACTGAAAAAGAT 636
Query 791 GAGGTTTATCTAAATCTTGTCCTTGAATTTGTTCCCGAGACTGTCAAT--CGTACTGCCA 848
||| | ||||| ||||| |||||||||| ||||| ||||||||| || ||| || ||
Sbjct 637 GAGCTCTATCTCAATCTGGTCCTTGAATACGTTCCTGAGACTGTCTATCGCGT-CT--CA 693
Query 849 GAAG--CTACAGTAGAATGAACCAGCTGATG-CCATTGATATATGTCAAACTCTACGCTT 905
||| ||| ||| | |||||| |||| ||||| |||||||| |||||||| |||
Sbjct 694 -AAGCACTATAGTCGGGCAAACCAGAGGATGCCCATT-ATATATGTTAAACTCTATACTT 751
Query 906 ATCAGATTTGCAGGGGGC-TT-GCTTACCTTCATAATTGCTGT-GGTCTTTGTCACCGGG 962
|||||||||||| | || || ||||| ||||| || || || | || ||| | |
Sbjct 752 ATCAGATTTGCA--GAGCTTTGGCTTATATTCAT-GGTGGAGTAGGAGTCTGCCACAGAG 808
Query 963 ATATTAAGCCCCAAAACCTGCTAGTGAATCCACACACACATCAGCTAAAAATTTGTGATT 1022
| || || || || || || || || ||||| || || |||||| | ||| | || ||||
Sbjct 809 ACATAAAACCACAGAATCTTCTGGTTAATCCTCATACGCATCAGGTCAAACTATGCGATT 868
Query 1023 TTGGGAGTGCAAAAGTGT-TGGTGAAAGGAGAACCCAATATTTCTTACATTTGTTCAAGA 1081
|||| || |||||||| | |||| ||||| || || || || || ||||| || || |
Sbjct 869 TTGGTAGCGCAAAAGT-TCTGGTTAAAGGCGAGCCAAACATCTCATACATCTGCTCCCGT 927
Query 1082 TACTATCGTGCCCCAGAGCTCATTTTTGGAGCCACTGAGTACACAACTGCAATAGACATA 1141
|||||||| || || || || || |||||||| || || || ||||| |||| ||||||
Sbjct 928 TACTATCGAGCACCTGAACTTATATTTGGAGCTACAGAATATACAACAACAATTGACATA 987
Query 1142 TGGTCCACAGGTTGTGTGATGGCTGAACTGCTGCTTGGACAGCCTCTGTTTCCTGGCGAA 1201
||||| |||| ||||| | |||||| |||| || ||||||||||| ||||| || ||
Sbjct 988 TGGTCTGCAGGCTGTGTTCTTGCTGAATTGCTTCTGGGACAGCCTCTATTTCCAGGTGAG 1047
Query 1202 AGTGGAGTCGACCAACTTGTTGAAATCATTAAGGTT-TTGGGTACACCAACAAGGGAGGA 1260
|||||||| ||||| || ||||| || || |||||| || || ||||||||| |||||||
Sbjct 1048 AGTGGAGTTGACCAGCTAGTTGAGATAATAAAGGTTCTT-GGAACACCAACACGGGAGGA 1106
Query 1261 GATCAAATGCATGAATCCAAACTACACAGAATTTAAATTTCCC-CAGATAAAACCTCATC 1319
|||||||||||||||||||||||||||||||| ||||| ||| || ||||| ||||||
Sbjct 1107 AATCAAATGCATGAATCCAAACTACACAGAATTCAAATT-CCCGCAAATAAAGGCTCATC 1165
Query 1320 CTTGGCACAAGGTTTTCCAAAAACGTTTGCCACCTGAAGCAGTAGATCTTCTTTGTAGG- 1378
|||||||||| | ||||| || ||| || || ||||| ||||| ||| | | ||
Sbjct 1166 CTTGGCACAAAATATTCCATAAGCGTACACCTCCAGAAGCTGTAGACCTTGTCTCAAGAC 1225
Query 1379 TTCTTCCAGTATTCTCCTAATTTGAGATGCA-CAGCGGTGGAAGCT-T-GTATCCATCCG 1435
|||| |||||||||||| || | |||| || | || |||| || | || || | |||
Sbjct 1226 TTCT-CCAGTATTCTCCAAACCTCAGAT-CAACCGCTATGGAGGCGATAGT-TC-ACCCG 1281
Query 1436 TTCTTTGATGAGCTAAGAGA-CCCAA-ACGCTCGTCTTCCAAACGGCCG-GCCACTT-CC 1491
||||| ||||||||| | || ||||| || | ||||||| || || || ||| || ||
Sbjct 1282 TTCTTCGATGAGCTACGTGATCCCAATACAC--GTCTTCCTAATGGTCGTGCC--TTGCC 1337
Query 1492 TCCACTTTTCAATTTTAAACCGCAAGAGCT 1521
||| || ||||| |||||||| ||||||||
Sbjct 1338 TCCTCTCTTCAACTTTAAACCTCAAGAGCT 1367
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 90511582635
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5