BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475499
Length=3747
Score E
Sequences producing significant alignments: (Bits) Value
AT1G64960.1 | Symbols: | ARM repeat superfamily protein | chr1... 5446 0.0
AT1G64970.1 | Symbols: G-TMT, TMT1, VTE4 | gamma-tocopherol met... 139 2e-31
> AT1G64960.1 | Symbols: | ARM repeat superfamily protein | chr1:24129918-24134204
FORWARD LENGTH=3767
Length=3767
Score = 5446 bits (2949), Expect = 0.0
Identities = 3514/3783 (93%), Gaps = 53/3783 (1%)
Strand=Plus/Plus
Query 1 ATGGAGAAAAGGCTCCGGTCATCTCTCAAGACATCCGCCGAAGAATTCCTCTCCTCCGCC 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct 1 ATGGAGAAAAGGCTCCGGTCATCTCTCAAGACATCCTCCGAAGAATTCCTCTCATCCGCC 60
Query 61 GTCAAATTAACCCTAAAATCCTCTAAACCCTCACTAAAAACCATCATCTACGCCGTCAAA 120
|||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||
Sbjct 61 GTCAAATTAACCCTTAAATCCTCAAAACCCTCACTAAAAACCATCATCAACGCCGTCAAA 120
Query 121 CCCTCGTCGGACCTCTCATCTTCTCTCCCACTCGCTCTTCTCAACTCCATCATCCAAAAC 180
|| || || ||||||||||||||||||||||||||||||| |||||||||| |||| ||
Sbjct 121 CCTTCCTCTGACCTCTCATCTTCTCTCCCACTCGCTCTTCACAACTCCATCCTCCACCAC 180
Query 181 ACAGAGTCCTTCCAAAAACTCGC-CGGCGAAG---ATGATAACAATCCCTATGTCCCTTC 236
||||| ||||||||||||||| | || ||||| || | |||||| ||||| |||||||
Sbjct 181 ACAGAATCCTTCCAAAAACTC-CTCGACGAAGTTAATAACAACAATACCTATATCCCTTC 239
Query 237 TCCTTCCAATTCGCCTCCAACGAAACGCCACCGCGGT---ACCGGAACTTTACCCGATTC 293
||||||||||||||||||||||||||| ||||| ||| |||||||| | ||| |||||
Sbjct 240 TCCTTCCAATTCGCCTCCAACGAAACGACACCGTGGTACCACCGGAACCTCACCAGATTC 299
Query 294 GGATTTGGATCAGCGTAAGCTTCAGATCCTTGCTTCTCTTCAGATTCTCTCTCATGTTGT 353
|||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||| |
Sbjct 300 GGATTTGGATCAACGTAAGCATCAGATCCTTGCTTCTCTTCAGATTCTCTCTTATGTTCT 359
Query 354 TCATTTATGTCTTTTAAGTCCGAAGAAAGCGTTTTCTACTTCCGATTTACTTCCCGCTGC 413
||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||
Sbjct 360 TCATTTATGTCTTTTAAATCCGAAGAATGCGTTTCCTACTTCCGATTTACTTCCCGCTGC 419
Query 414 TCAAGTTTTGCATAATCATCTTAGACTT-TTCGAGTCGGATTCGGTTTTGTGTCTTGAGA 472
||||| |||||||||| |||||||| || ||||| |||||||||||||||||||||||||
Sbjct 420 TCAAGCTTTGCATAATAATCTTAGA-TTGTTCGAATCGGATTCGGTTTTGTGTCTTGAGA 478
Query 473 TCGCTGGGA-TTTGTGAGTGTTGGTGGAAGGAAGGTTTAGTGGAAAGAGAATCTTTGATT 531
| ||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 479 TTGCT-GGAGTTTGTGAGTGTTGGTGGAAGGAAGGTTTAGTGGGAAGAGAATCTTTGATT 537
Query 532 TCTCAGTCGTTACCGTTTTTGCTTTCGAGGTCATTGACATTGAAGAAGAAAGTAGATGTT 591
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 538 TCTCAGTCGTTACCGTTTTTGCTATCGAGGTCATTGACATTGAAGAAGAAAGTTGATGTT 597
Query 592 CATAGAGTTTATATG-TTGAGAGAAGCTTTTACATTGTTTGATTTTGAGGATGAGAGTAT 650
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 598 CATAGAGTTTATATGCTT-AGAGAAGCTTTTACATTGTTTGATTTTGAGGATGAGAGTAT 656
Query 651 TGAAGATCTGAGGATGTTG-TTGATGCGATGTGTGGTTTCGCCGTTGTATGTGAAGACCG 709
|||||||| ||||||||| || ||||| ||||| ||||||||||||||||||||||| |
Sbjct 657 AGAAGATCTTAGGATGTTGCTT-ATGCGGTGTGTTGTTTCGCCGTTGTATGTGAAGACTG 715
Query 710 AAGATGGTCAGAGATTTGTTTCTTTTGCTTTCGGGCTTAGTCGACAGTTGATGAAAGCTG 769
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 716 AAGATGGTCAGAGATTTGTTTCTTTTGCTTTCGGGCTTAGTCGACAGTTGATGAAATCTG 775
Query 770 GCCTTGCTGTTGTTAAGGCTCAGATTCCTTTGGGGAGGAAATCTGTGCTTGAAGGCTTTG 829
| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 776 GTCTTGCTGTTGTTAAGGCTCAGATTCCTTTGGGGAGCAAATCTGTGCTTGAAGGTTTTG 835
Query 830 GTGGGATTTTGTTTAGAGCTTGGAAAGAAGTGGAGCTAGATTTGAAAGGTGAGATTGAAG 889
||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct 836 GTGGGATTTTGTTTAGAGCTTGGAAAGAAGTGGAGTTAGATTTAAAAGGTGAGATTGAAG 895
Query 890 ATGGGTTTTTGCAGGGGATTATCGATAGTGCTATTCACGCCAGTTCGTGCGCCTTTGCTG 949
|||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||
Sbjct 896 ATGGGTTTTTGCAGGGGATTATTGATAGTGCTATTCACGCTAGTTCGTCCGCCTTTGCTG 955
Query 950 CCTCGTTAAGGAGGGTTTT-GG-GAGGTTTCATCAGTCAGCGGACAACTCAAGGAGTTGA 1007
||||||||||||||||||| || | ||||| || ||||||||||| ||||||| |||||
Sbjct 956 CCTCGTTAAGGAGGGTTTTAGGCG-GGTTT-ATTAGTCAGCGGACCTCTCAAGGTGTTGA 1013
Query 1008 GAAGCTTCTCTTTAGC-CTTGCTGAGCCTATGATATTTCGATCATTGCAGGTTGCAAATT 1066
|||||||||||||| | ||||||||||||||||||||||| || || |||||||||||||
Sbjct 1014 GAAGCTTCTCTTTA-CTCTTGCTGAGCCTATGATATTTCGCTCGTTACAGGTTGCAAATT 1072
Query 1067 CAAATGTTCGTTTAAATGCTTTACATTTGCTTCTGGATCTTTTCCCCATGGAGGATCCCG 1126
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1073 CAAATGTTCGTTTAAATGCTTTACATTTGCTTCTGGATCTTTTCCCCATGGAGGATCCAG 1132
Query 1127 ATGCAACAAAAGAAGCAAAAGATACCCTGCTTGACAAACAGTTCTACTTGTTGGAAAAAT 1186
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1133 ATGCAACAAAAGAAGCAAAAGATACTCTGCTTGACAAACAGTTCTACTTGTTGGAAAAAT 1192
Query 1187 TGA-TGAGTGATGAATACCCAGATGTGAGGTCTGTTGCTGTGGAAGGTCTCTGTCGAGTT 1245
| | |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1193 T-ATTGAGTGATGAATGCCCAGATGTGAGGTCTGTTGCTGTGGAAGGTCTCTCTCGAGTT 1251
Query 1246 TTCTATCTTTTCTGGGAAGTGATCCCATCAACAACAATTACCAAGGTCCTCACAAAAATT 1305
|||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct 1252 TTCTATCTTTTCTGGGAAGTGATCCCATCAGCAACAATTACCAAGGTCCTCACGAAAATT 1311
Query 1306 TTCGATGATATGTCACATGAATCGTGCAGTGAGGTTAGACTTTCAACCGTTAATGGTATA 1365
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1312 TTCGATGATATGTCACATGAATCGTGCAGTGAGGTTAGACTTTCAACGGTTAATGGTATA 1371
Query 1366 ACTTATCTCCTCGCGAACCCACAATCCCATGGAATTCTTAAAGTGGTTCTGCCAAGACTG 1425
|||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct 1372 ACTTATCTCCTCGCGAACCCACAATCCCATGGCATTCTTAAAGTGATTCTGCCAAGACTG 1431
Query 1426 GGGCATTTGATGCTAGATAGTGTTACTTCAATACGTGTTGCGATGGTAGATCTACTGCTT 1485
|||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||
Sbjct 1432 GGGCATTTGATGCTAGATAGTGTTACTTCAGTACGCGTTGCAATGGTAGATCTACTGCTT 1491
Query 1486 CTTTTACGAGATGTTCGCGCTTTCCAGTTCAACACGGTAGTGAGCTTGGATGTGTTATTA 1545
||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1492 CTTATACGAGATGTTCGCGCTTTCCAGTTTAACACGGTAGTGAGCTTGGATGTGTTATTA 1551
Query 1546 TCTGTGCTTGCCTCTGATCAGACTCATGTTGCTAAGGGAATCGCTCGACTGCTAATACCA 1605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1552 TCTGTGCTTGCCTCTGATCAGACTCATGTTGCTAAGGGAATCGCTCGACTGCTAATACCA 1611
Query 1606 TCATACTTTCCATCAAGAAAGAGAGCTGAGGAGGCATGCCAGCGATGTAGGACACTCATA 1665
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1612 TCATACTTTCCATCACGAAAGAGAGCTGAGGAGGCATGCCAGCGATGTAGGACACTCATA 1671
Query 1666 AACAGAAACCCAATGGCTGGTGCAAGGTTTTCCGAATTTTTGGTATCTTTAGGAGCAACC 1725
||||||||||||| |||||||||||| |||| ||||||||| |||||| |||||||||||
Sbjct 1672 AACAGAAACCCAAAGGCTGGTGCAAGATTTTGCGAATTTTTAGTATCTCTAGGAGCAACC 1731
Query 1726 GTTCAATCTGTACTGCACCTCGTTGGGTTCTTCTTGAATTCAGTCTTGTCAGGTGATAAG 1785
||| |||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||
Sbjct 1732 GTTAAATCTGTACTGCACCTTGTTGGATTCTTCTTGAATTCAGTTTTGTCAGGTGATAAG 1791
Query 1786 CTAGACGAGAATCAGACTGAAGGCTTGCTTCGTGCTGCGTACCATCTCTGTAAAGATTTG 1845
||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1792 CTATTGGAGAATCAGACTGAAGGCTTGCTTCGTGCTGCGTACTATCTCTGTAAAGATTTG 1851
Query 1846 GTTGCTGATTCTGGGTGTATGGCCTCCCTGAAAGAGTTGTTACCTGGAGAAAAAATGAAA 1905
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1852 GTTGCTGATTCTGGGTGTATGGCCTCCCTGAAAGAGTTGTTACCTGGAGAAAAATTGAAA 1911
Query 1906 AGCTTGCTTGCTTTTGCACCCACTGCACAGGCTGTGTCAGCTGTCTTTGATATAATTGCT 1965
|||||||| ||||| |||||||||||||||||| |||| ||||| |||||||||| ||
Sbjct 1912 AGCTTGCTAGCTTTCGCACCCACTGCACAGGCTCAGTCATCTGTCATTGATATAATCACT 1971
Query 1966 ATGGTCTCCCCTGATATCGTCTCTGAAGTCCTAGAAGATTGCATGAATTTAGCTGTAAAT 2025
||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||| |||
Sbjct 1972 ATGGTCTCCCCTGATATTGTCTCTGAAGTCCTTGAAGATTGCATGAATTTAGTTGTTAAT 2031
Query 2026 TGTGGTGGTTTACCTGGGGATGCAGGACGACAGACCGAGTTGAGATCTGTACACAAGTTA 2085
||||||||||| ||| | ||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2032 TGTGGTGGTTTGCCTAGTGATGCAGGACGACAGACGGAGTTGAGATCTGTACACAAGTTA 2091
Query 2086 CTCCTGTCTTCTAATGCCTTTCGTGACCTCATTGGAACTTTTACCAGTATCGTGCAGAAG 2145
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 2092 CTCCTGTCTTCTAATGCCTTTTGTGACCTCATTGGAACTTTTACCAGTATCATGCAGAAG 2151
Query 2146 ACTGCGTACCGTTGTCAAATCAATTTTGGCTACGAAGTAGAAAGAAAGAATGTGCATTCC 2205
|||||||||||||||||||||||||||||||| |||||||||||||||||| | || |||
Sbjct 2152 ACTGCGTACCGTTGTCAAATCAATTTTGGCTATGAAGTAGAAAGAAAGAATTTACAGTCC 2211
Query 2206 ATGAAGAGGAAAAAATCAAAGTCCTCTGGAAAATCTTCGGCAAGGTGGAAACATGTTAGC 2265
||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct 2212 ATGAAGAGGAAGAAATCAAAATCCTCTGGAAAATCTTCGGTAAGGTGGAAACATGTTAGC 2271
Query 2266 GGAAAAAATGCAATCCGTTTCGAGGAAGATTATTCGGTTTCTGTAGGAATAGCATGGCAG 2325
||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||
Sbjct 2272 GGAAAAAATGCAATCAGTTTCGAGGAAGATTATTTGGTTGCTGTAGGAATAGCATGGCAA 2331
Query 2326 ATAAAGGATTTACTCACTATCGAAGCTGCACGTAAAGCTATACTGGAGTCTGACATTGAA 2385
||||||||||||||||||| ||||| |||||||||| |||||||||||||||| |||||
Sbjct 2332 ATAAAGGATTTACTCACTACCGAAGATGCACGTAAATCTATACTGGAGTCTGATATTGAG 2391
Query 2386 GAGCTACTCCTTGCCTTGAAAGTCGTCTCCCAGACTAGCATTCTGCAAGCCACTTGTTGC 2445
||||| |||||| |||| ||||||||||| || ||||||||| ||||||||||||||||
Sbjct 2392 GAGCTGCTCCTTTCCTTAAAAGTCGTCTCACACACTAGCATTTTGCAAGCCACTTGTTGT 2451
Query 2446 GAATACATGGACGTGTACCCAGATATCATGGACCGAACAATGGATCACATCCTAGGCTGT 2505
||||||||||||||| | |||||||| ||||||| |||||||||||||||||||| ||||
Sbjct 2452 GAATACATGGACGTGAATCCAGATATTATGGACCAAACAATGGATCACATCCTAGTCTGT 2511
Query 2506 ACAGATGAACTATTTCAGACAGGGGACAGTGGAACGCCAGGCATCACATCTCCAGAGGCT 2565
|||||||||||||||||| |||| |||| |||||||||||||| ||||||||||||||||
Sbjct 2512 ACAGATGAACTATTTCAGGCAGGTGACATTGGAACGCCAGGCACCACATCTCCAGAGGCT 2571
Query 2566 AACCTTAGCAAAAAACCCACTACAAGTAACGGCAGCCAACCAAAAAGAAGACATTCCATT 2625
||||||||||| ||||| |||||||||||||||| |||||||||| ||||| || | |
Sbjct 2572 AACCTTAGCAAGAAACCGACTACAAGTAACGGCAACCAACCAAAACGAAGAAATAGAAAT 2631
Query 2626 GCTGGTGATGATGCTTCTGAGGGATCAAAGGAAGGAGGTGTGCTTAACAATGTCAAAATG 2685
||| |||||||||||||||| |||||||||||||||||||| || ||||| |||||||||
Sbjct 2632 GCTCGTGATGATGCTTCTGAAGGATCAAAGGAAGGAGGTGTACTGAACAAGGTCAAAATG 2691
Query 2686 CTAACTGTGATTCTCAAGTTTTTTGTTGAGTCTACAGATATGGGTCTAGCTTCCCACTTC 2745
||||||| |||| ||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct 2692 CTAACTGCGATTTTCAAGTTTTTTGTTGAGTCTACAGAGATGGGTCTAGCTTCCAACTTT 2751
Query 2746 CAAGCAAGGATGTTGAAGTTCACATCTGCATATCTAAAGTATGCCATCTTGATTTTCAAT 2805
|||||||| ||||| ||||| ||||||| ||||||||||||| ||||| ||||||||
Sbjct 2752 CAAGCAAGTATGTTTAAGTTTTCATCTGCGTATCTAAAGTATGTCATCTCCATTTTCAAC 2811
Query 2806 GACCATTCAACCGGTAAGTTACAATTTGAGGATGCAGATATGAAGGACATGATTCTGTGT 2865
||||||||||||||||||||| |||||||||| || ||||||||||| ||||||||||||
Sbjct 2812 GACCATTCAACCGGTAAGTTAGAATTTGAGGACGCTGATATGAAGGAAATGATTCTGTGT 2871
Query 2866 ACAAAAAGCTCCACCAGTTATGCTGGAAAATTCATAAACCTAGTGCTGAGACATGCAACC 2925
||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||
Sbjct 2872 ACAAAAAGCTCCACCAGTTATGCCGGAAAGTTCATAAACCTAGTGATGAGACATGCAACC 2931
Query 2926 GAAGCTTCTCATCCTTTGTTTGAAGCTTTTGACCTTGCAAATGACCTGCTTGATCTCTTC 2985
|||||||| | |||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct 2932 GAAGCTTCACGCCCTTTGTTTGAATCATTTGACCTTGCAAATGACCTGCTTGATCTCTTC 2991
Query 2986 ACCATGGTTGAGATATC-TCTAGGCTCAGCTTATGCATCAAGACTTGTGACCGCTTTAAA 3044
||||||||||||| ||| | ||||||| ||||||||||||||| ||||| | ||||||||
Sbjct 2992 ACCATGGTTGAGAAATCGT-TAGGCTCGGCTTATGCATCAAGAATTGTGTCAGCTTTAAA 3050
Query 3045 CCCCTGGATACCAGATTTGGTTCTTGCACTAGGACCCTGTTTCATCAACAACGACAACTT 3104
||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 3051 CCCTTGGATTCCAGATTTGGTTCTTGCACTAGGACCTTGTTTCATCAACAACGACA---- 3106
Query 3105 CGACGAAGAAAGTTCATACACCAGCTCATTCAACCACATCAAACTCTGCGTTCCATCATG 3164
| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct 3107 -G-CGAAGAAAGTTCATACACCAGCTCATTCAACCACATCAAACTCTGCTTTCCTTCATG 3164
Query 3165 GCTTCTTACATGTGCGAAGATCGAACTACATGAAATTAACAAAGAAGATGAGACTGAGAC 3224
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 3165 GCTTCTTACATGTGCGAAGATCGAACTACATGAAATTAACAAAGAAGATGTGACTGAGAC 3224
Query 3225 CCCGGATTTCCCGGCATTAAAAAGACTGAGAAACACCATATTTACATTGGTGAAAGGTAA 3284
| ||| ||||| ||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct 3225 CTCGGGTTTCCTGGCATTAAAAAAACTGAGAAACACTATATTTACATTGGTGAAAGGTAA 3284
Query 3285 CACCAAGGTGATAGATGGAATTGGTTATGTTCTTTTGATGTGTTTGGCAGTGTGTATAGA 3344
|||||||||| |||||| ||||||||||||||||||| | ||||||||||| ||||||||
Sbjct 3285 CACCAAGGTGTTAGATGCAATTGGTTATGTTCTTTTGTTATGTTTGGCAGTCTGTATAGA 3344
Query 3345 GAAGAGGGATTACAGTACGGCTCTCGGGTTGCTACACTTTGTATGTGTGAAGTTGGTAGG 3404
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 3345 GAAGAGGGATTACAGTACGGCTCTCGGGTTGCTACACTTGGTATGTGTGAAGTTGGTAGG 3404
Query 3405 TAGTGAAGATAGAGAATGGAAAGAGCTGGACACAATGTTGGTCTCACTTCCAAGAATATA 3464
||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| ||
Sbjct 3405 TAGTGAAGATAGAGAGTGGAAAGAGCTGGACACAATGTTGGTCTTACTTCCGAGAATTTA 3464
Query 3465 CCCGATAATAGAGCAAGAGATTGGTGAAGAAAGAGATGAAGATGAAGTGAAGAAGCTGGA 3524
|||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 3465 CCCGATAATAGAGCGAGAGATTGGTGAAGGAAGAGATGAAGATGAAGTGAAGACGCTGGA 3524
Query 3525 GGCTGCAAGAGAATTGCTTCAACCTGTGTGGATGTACCATGTCTACGAAACCGGAAGGTT 3584
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3525 GGCTGCAAGAGAACTGCTTCAACCTGTGTGGATGTACCATGTCTACGAAACCGGAAGGTT 3584
Query 3585 CCACATGATGGATGAAGAAGAAGAATAGATAAGAAAGTAACATTATTCGAGAGCAGTACC 3644
||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct 3585 CCACATGATGGATGAGGAAGAAGAATAGATAAGAATGTAACATTATTCGAGAGCAGTACT 3644
Query 3645 GTAT-ATG--T-A------AA---T--A--T--GAGCTAATCCGTGACAATCACTTTTGA 3685
|||| ||| | | || | | | ||| |||||| |||||||||||| ||
Sbjct 3645 GTATTATGAGTTACTGCTGAAGCATGTAAATATGAGTTAATCCATGACAATCACTTCCGA 3704
Query 3686 GAATTTACCAGATAATATGAGCTAATTCATGGTATTTATTGTTT-TAAGAAACTACCTTA 3744
|| |||||||||||| |||||||||||||||||||||||||||| || ||||||||||||
Sbjct 3705 GAGTTTACCAGATAACATGAGCTAATTCATGGTATTTATTGTTTATA-GAAACTACCTTA 3763
Query 3745 GAC 3747
|||
Sbjct 3764 GAC 3766
> AT1G64970.1 | Symbols: G-TMT, TMT1, VTE4 | gamma-tocopherol methyltransferase
| chr1:24134085-24136109 REVERSE LENGTH=1415
Length=1415
Score = 139 bits (75), Expect = 2e-31
Identities = 92/100 (92%), Gaps = 2/100 (2%)
Strand=Plus/Minus
Query 3649 ATGTAAATATGAGCTAATCCGTGACAATCACTTTTGAGAATTTACCAGATAATATGAGCT 3708
||||||||||||| |||||| |||||||||||| |||| |||||||||||| |||||||
Sbjct 1395 ATGTAAATATGAGTTAATCCATGACAATCACTTCCGAGAGTTTACCAGATAACATGAGCT 1336
Query 3709 AATTCATGGTATTTATTGTTT-TAAGAAACTACCTTAGAC 3747
||||||||||||||||||||| || |||||||||||||||
Sbjct 1335 AATTCATGGTATTTATTGTTTATA-GAAACTACCTTAGAC 1297
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 186621027960
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5