BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg475586 Length=993 Score E Sequences producing significant alignments: (Bits) Value AT1G65310.1 | Symbols: ATXTH17, XTH17 | xyloglucan endotransglu... 911 0.0 AT4G30280.1 | Symbols: ATXTH18, XTH18 | xyloglucan endotransglu... 811 0.0 AT4G30290.1 | Symbols: ATXTH19, XTH19 | xyloglucan endotransglu... 612 2e-174 AT5G48070.1 | Symbols: ATXTH20, XTH20 | xyloglucan endotransglu... 597 6e-170 > AT1G65310.1 | Symbols: ATXTH17, XTH17 | xyloglucan endotransglucosylase/hydrolase 17 | chr1:24257216-24258473 FORWARD LENGTH=1049 Length=1049 Score = 911 bits (493), Expect = 0.0 Identities = 521/535 (97%), Gaps = 0/535 (0%) Strand=Plus/Plus Query 27 AAAATGAAGCTTTCTTGTGGTACAAGTTTTTCGTTCTTAATTCTGTTTCTTCTTGCGGGA 86 |||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||| | Sbjct 44 AAAATGAAGCTTTCTTGTGGTACAAGCTTTGCGTTCTTACTTCTGTTTCTTCTTGCGGCA 103 Query 87 CAATATGTGCATGTCTATGCGGGTAGCTTCCACAAAGACGTTCAGATACATTGGGGTGAT 146 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 104 CAATCTGTGCATGTCTATGCGGGTAGCTTCCACAAAGACGTTCAGATACATTGGGGTGAT 163 Query 147 GGCCGCGGAAAGATTCACGACAAAGATGGAAAACTTCTTTCTCTCTCGCTCGACAAATCC 206 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 164 GGCCGCGGAAAGATTCACGACAGAGATGGAAAACTTCTTTCTCTCTCGCTCGACAAATCC 223 Query 207 TCTGGATCCGGTTTTCAGTCTAACCAGGAGTTTCTCTATGGCAAAGCCGAGGTTCAAATG 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 224 TCTGGATCCGGTTTTCAGTCTAACCAGGAGTTTCTCTATGGCAAAGCCGAGGTTCAAATG 283 Query 267 AAACTTGTTCCTGGTAATTCAGCTGGAACAGTAACAACATTCTATCTAAAATCGCCGGGA 326 |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct 284 AAACTTGTTCCTGGTAATTCAGCTGGAACAGTGACAACATTCTATCTAAAATCTCCGGGA 343 Query 327 ACTACGTGGGATGAGATCGATTTCGAGTTCTTGGGAAACATAAGTGGTCATCCGTATACT 386 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 344 ACTACGTGGGATGAGATCGATTTCGAGTTCTTGGGAAACATAAGTGGTCATCCATATACT 403 Query 387 CTCCATACTAATGTTTACACAAAAGGCACAGGAGACAAAGAACAACAATTTCATCTATGG 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 404 CTCCATACTAATGTTTACACAAAAGGCACAGGAGACAAAGAACAACAATTTCATCTATGG 463 Query 447 TTCGACCCAACCGTTAACTTTCACACTTATTGCATCACATGGAATCCCCAAAGGATTATT 506 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 464 TTCGACCCAACCGTTAACTTTCACACTTATTGCATCACATGGAATCCTCAAAGGATTATT 523 Query 507 TTTACGGTTGATGGAATTCCTATTAGAGAGTTCAAAAACTCTGAGGCAATTGGAG 561 ||||||||||||||||||||||||||||||||||| ||| | ||||| ||||||| Sbjct 524 TTTACGGTTGATGGAATTCCTATTAGAGAGTTCAAGAACCCCGAGGCGATTGGAG 578 Score = 606 bits (328), Expect = 1e-172 Identities = 411/448 (92%), Gaps = 17/448 (4%) Strand=Plus/Plus Query 559 GAG-CTCTACGCGAGTCTCTGGGAAGCCGAGCATTGGGCAACAAGAGGAGGATTAGAGAA 617 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 604 GAGACTCTACGCGAGTCTTTGGGAAGCCGAGCATTGGGCAACAAGAGGAGGATTAGAGAA 663 Query 618 AACAGATTGGTCAAAAGCTCCTTTTACTGCTTTCTACAGAAACTACAATGTCGATGGATG 677 ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct 664 AACAGATTGGTCAAAAGCTCCTTTTACTGCTTTTTATAGAAACTACAATGTCGATGGATG 723 Query 678 -GTATGGGCTAACGGAAAATCATCATGTTCCGCGAATTCCCCATGGTTCACTCAAAAACT 736 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 724 TGTATGGGCTAATGGAAAATCATCTTGTTCCGCGAATTCCCCATGGTTCACTCAAAAACT 783 Query 737 CGATTCAAATGGCCAGACAAGAATGAAAGGTGTACAAAGTAAATACATGATCTACAACTA 796 |||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 784 CGATTCGAACGGCCAGACAAGAATGAAAGGTGTGCAAAGTAAATACATGATCTACAACTA 843 Query 797 TTGCACCGATAAAAGAAGGTTTCCTCGCG-ATGTTCCTGCAGTGTGCACTTAAATTGTTG 855 ||||||||||||||||||||||||||| | | |||||||| | ||||||||||||| ||| Sbjct 844 TTGCACCGATAAAAGAAGGTTTCCTCGAGGA-GTTCCTGCCGAGTGCACTTAAATTCTTG 902 Query 856 ATTCTTTGAT----GAATAAGTTACTTGGTATTGCCTTTGTAACTCAATTAAGTTTTTAT 911 |||||||||| ||||| ||||||||| ||||||||||||||||||| |||||||||| Sbjct 903 ATTCTTTGATACATGAATATGTTACTTGGCATTGCCTTTGTAACTCAATCAAGTTTTTAT 962 Query 912 CTATTTTTATCATTTATTTGTTGCTCATATATA---T--GTGGTGTTTATGTAAAGATGT 966 |||||||||||||||||||||||||||||||| | ||||||||| ||||| ||||| Sbjct 963 TTATTTTTATCATTTATTTGTTGCTCATATATACAGTATGTGGTGTTTGTGTAA-GATGT 1021 Query 967 TTGCA-A--GAAGTAATAAATATAAATT 991 || | | ||||||||||| ||||||| Sbjct 1022 TTTAAGATTGAAGTAATAAAAATAAATT 1049 > AT4G30280.1 | Symbols: ATXTH18, XTH18 | xyloglucan endotransglucosylase/hydrolase 18 | chr4:14825808-14827047 REVERSE LENGTH=1048 Length=1048 Score = 811 bits (439), Expect = 0.0 Identities = 504/536 (94%), Gaps = 2/536 (0%) Strand=Plus/Plus Query 27 AAAATGAAGCTTTCTTGTGGTACAAGTTTTTCGTTCTTAATTCTGTTTCTTC-TTGCGGG 85 |||||||||||||||||||||||||||||| ||||||| ||| |||||| || |||||| Sbjct 47 AAAATGAAGCTTTCTTGTGGTACAAGTTTTGCGTTCTTGATTATGTTTC-TCTTTGCGGC 105 Query 86 ACAATATGTGCATGTCTATGCGGGTAGCTTCCACAAAGACGTTCAGATACATTGGGGTGA 145 ||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 106 ACAATCTATGCATGTCTATGCGGGTAGCTTCCACAAAGATGTTCAGATACATTGGGGTGA 165 Query 146 TGGCCGCGGAAAGATTCACGACAAAGATGGAAAACTTCTTTCTCTCTCGCTCGACAAATC 205 ||||| |||||| | | ||||| ||||||||| ||||| |||||||||||||||||||| Sbjct 166 CGGCCGTGGAAAGGTGCGCGACAGAGATGGAAAGCTTCTATCTCTCTCGCTCGACAAATC 225 Query 206 CTCTGGATCCGGTTTTCAGTCTAACCAGGAGTTTCTCTATGGCAAAGCCGAGGTTCAAAT 265 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 226 CTCTGGATCCGGTTTTCAGTCCAACCAGGAGTTTCTCTATGGCAAAGCCGAGGTTCAAAT 285 Query 266 GAAACTTGTTCCTGGTAATTCAGCTGGAACAGTAACAACATTCTATCTAAAATCGCCGGG 325 ||||||||| |||||||| ||||||||||||||||||||||||||||| || || ||||| Sbjct 286 GAAACTTGTCCCTGGTAACTCAGCTGGAACAGTAACAACATTCTATCTTAAGTCTCCGGG 345 Query 326 AACTACGTGGGATGAGATCGATTTCGAGTTCTTGGGAAACATAAGTGGTCATCCGTATAC 385 |||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||| Sbjct 346 AACTACGTGGGATGAGATTGATTTCGAGTTCTTAGGAAACCTAAGTGGTCATCCGTATAC 405 Query 386 TCTCCATACTAATGTTTACACAAAAGGCACAGGAGACAAAGAACAACAATTTCATCTATG 445 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 406 TCTCCATACTAATGTTTACACAAAAGGCTCAGGAGACAAAGAACAACAATTTCATCTATG 465 Query 446 GTTCGACCCAACCGTTAACTTTCACACTTATTGCATCACATGGAATCCCCAAAGGATTAT 505 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 466 GTTCGACCCAACTGTTAACTTTCACACTTATTGCATCACATGGAATCCCCAAAGGATTAT 525 Query 506 TTTTACGGTTGATGGAATTCCTATTAGAGAGTTCAAAAACTCTGAGGCAATTGGAG 561 |||||| ||||||||||||||||||||||||||||| ||||| ||| ||||||||| Sbjct 526 TTTTACAGTTGATGGAATTCCTATTAGAGAGTTCAAGAACTCCGAGTCAATTGGAG 581 Score = 538 bits (291), Expect = 4e-152 Identities = 392/440 (89%), Gaps = 10/440 (2%) Strand=Plus/Plus Query 561 GCTCTACGCGAGTCTCTGGGAAGCCGAGCATTGGGCAACAAGAGGAGGATTAGAGAAAAC 620 ||| |||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| Sbjct 610 GCTTTACGCGAGTCTCTGGGAAGCCGAGCATTGGGCTACAAGGGGAGGGTTAGAGAAAAC 669 Query 621 AGATTGGTCAAAAGCTCCTTTTACTGCTTTCTACAGAAACTACAATGTCGATGGATG-GT 679 |||||||||||| |||||||| || ||||||||||||||||||||||| || ||||| || Sbjct 670 AGATTGGTCAAAGGCTCCTTTCACCGCTTTCTACAGAAACTACAATGTTGAAGGATGTGT 729 Query 680 ATGGGCTAACGGAAAATCATCATGTTCCGCGAATTCCCCATGGTTCACTCAAAAACTCGA 739 ||||||||| ||||||||||| ||| |||| |||||| |||||||||||||| ||||||| Sbjct 730 ATGGGCTAATGGAAAATCATCTTGTCCCGCAAATTCCTCATGGTTCACTCAACAACTCGA 789 Query 740 TTCAAATGGCCAGACAAGAATGAAAGGTGTACAAAGTAAATACATGATCTACAACTATTG 799 |||||| |||||||||||||||||||| ||||| ||||| |||||| ||||||||||||| Sbjct 790 TTCAAACGGCCAGACAAGAATGAAAGGGGTACAGAGTAAGTACATGGTCTACAACTATTG 849 Query 800 CACCGATAAAAGAAGGTTTCCTCGCGATGTTCCTGCAGTGTGCACTTAAATTGTTGATTC 859 | ||| ||||||||||||||||| | |||||||| || ||||| ||||||||||||||| Sbjct 850 TAACGACAAAAGAAGGTTTCCTCGAGGTGTTCCTGTAGAGTGCAGTTAAATTGTTGATTC 909 Query 860 TTTGAT----GAATAAGTTACTTGGTATTGCCTTTGTAACTCAATTAAGTTTTTATC-TA 914 |||||| ||||||||||||||| |||||||| ||||||||||| |||| ||| | || Sbjct 910 TTTGATACATGAATAAGTTACTTGGCATTGCCTTAGTAACTCAATTGAGTTCTTA-CATA 968 Query 915 TTTTTATCATTTATTTGTTGCTCATATATATGTGGTGTTTATGTAAAGATG-TTTGCAAG 973 ||||||||||| ||||||||||||||| |||| ||||||| ||||| |||| ||| ||| Sbjct 969 TTTTTATCATTCATTTGTTGCTCATATGTATGCGGTGTTTGTGTAA-GATGATTTT-AAG 1026 Query 974 AAGTAATAAATATAAATTAT 993 |||||||||| ||||||||| Sbjct 1027 AAGTAATAAAAATAAATTAT 1046 > AT4G30290.1 | Symbols: ATXTH19, XTH19 | xyloglucan endotransglucosylase/hydrolase 19 | chr4:14828712-14830016 REVERSE LENGTH=1127 Length=1127 Score = 612 bits (331), Expect = 2e-174 Identities = 440/493 (89%), Gaps = 6/493 (1%) Strand=Plus/Plus Query 50 AAGT-TTTT-CGTTCTTAATTCTGTTTCTTC-TTGCGGGACAATATGTGCA-TGTCTATG 105 |||| |||| ||||||| ||||| |||| || |||| | ||||| | | || ||||||| Sbjct 55 AAGTCTTTTACGTTCTTGATTCTCTTTC-TCTTTGCAGCACAATCTAT-CAGCGTCTATG 112 Query 106 CGGGTAGCTTCCACAAAGACGTTCAGATACATTGGGGTGATGGCCGCGGAAAGATTCACG 165 | || |||||||||||||||||| ||||||||||||||||||| || ||||||||||||| Sbjct 113 CAGGCAGCTTCCACAAAGACGTTAAGATACATTGGGGTGATGGTCGTGGAAAGATTCACG 172 Query 166 ACAAAGATGGAAAACTTCTTTCTCTCTCGCTCGACAAATCCTCTGGATCCGGTTTTCAGT 225 | || | || |||||||| ||||||||||| |||||||||||||| || ||||| || | Sbjct 173 ATAATCAAGGGAAACTTCTATCTCTCTCGCTTGACAAATCCTCTGGTTCAGGTTTCCAAT 232 Query 226 CTAACCAGGAGTTTCTCTATGGCAAAGCCGAGGTTCAAATGAAACTTGTTCCTGGTAATT 285 |||| || |||||||||||||| |||||||| ||||||||||||||||| |||||||| | Sbjct 233 CTAATCAAGAGTTTCTCTATGGTAAAGCCGAAGTTCAAATGAAACTTGTCCCTGGTAACT 292 Query 286 CAGCTGGAACAGTAACAACATTCTATCTAAAATCGCCGGGAACTACGTGGGATGAGATCG 345 | |||||||| || |||||||||||||| ||||| ||||||||||| ||||||||||| | Sbjct 293 CTGCTGGAACCGTCACAACATTCTATCTTAAATCTCCGGGAACTACATGGGATGAGATTG 352 Query 346 ATTTCGAGTTCTTGGGAAACATAAGTGGTCATCCGTATACTCTCCATACTAATGTTTACA 405 |||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct 353 ATTTCGAGTTTTTGGGGAACATAAGTGGTCATCCATATACTCTCCATACTAATGTTTACA 412 Query 406 CAAAAGGCACAGGAGACAAAGAACAACAATTTCATCTATGGTTCGACCCAACCGTTAACT 465 |||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 413 CAAAAGGCTCAGGAGACAAAGAACAACAATTTCATCTATGGTTTGACCCAACCGCTAACT 472 Query 466 TTCACACTTATTGCATCACATGGAATCCCCAAAGGATTATTTTTACGGTTGATGGAATTC 525 |||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| |||| Sbjct 473 TTCACACTTATTGCATCACATGGAATCCACAAAGAATTATTTTTACCGTTGATGGGATTC 532 Query 526 CTATTAGAGAGTT 538 | ||||||||||| Sbjct 533 CAATTAGAGAGTT 545 Score = 403 bits (218), Expect = 1e-111 Identities = 359/423 (85%), Gaps = 25/423 (6%) Strand=Plus/Plus Query 561 GCTCTACGCGAGTCTCTGGGAAGCCGAGCATTGGGCAACAAGAGGAGGATTAGAGAAAAC 620 ||| || |||||||| |||||||| ||||||||||| ||||| ||||||||||||||||| Sbjct 597 GCTATATGCGAGTCTATGGGAAGCAGAGCATTGGGCTACAAGGGGAGGATTAGAGAAAAC 656 Query 621 AGATTGGTCAAAAGCTCCTTTTACTGCTT-TCTACAGAAACTACAATGTCGATGGATG-G 678 ||||||||||||||||||||| || |||| | |||||||||||||||||||| ||||| | Sbjct 657 AGATTGGTCAAAAGCTCCTTTCACCGCTTAT-TACAGAAACTACAATGTCGAGGGATGTG 715 Query 679 TATGGGCTAACGGAAAATCA-TCATGTTCCGCGAATTCCCCATGGTTCACTCAAAAACTC 737 |||||| ||| ||||| ||| | ||| |||| ||||||| ||||||||||||||||||| Sbjct 716 TATGGGTTAATGGAAAGTCAGT-TTGTCCCGCAAATTCCCAATGGTTCACTCAAAAACTC 774 Query 738 GATTCAAATGGCCAGACAAGAATGAAAGGTGTACAAAGTAAATACATGATCTACAACTAT 797 ||||| ||||||||||||||||||||||| ||||| |||||||||||| | ||||||||| Sbjct 775 GATTCGAATGGCCAGACAAGAATGAAAGGGGTACAGAGTAAATACATGGTTTACAACTAT 834 Query 798 TGCACCGATAAAAGAAGGTTTCCTCGCGATGTTCCTGCAGTGTGCA-CTTAAATTG-TTG 855 ||| ||||||||| |||||||||||| | ||||||| ||| ||||| || |||| | ||| Sbjct 835 TGCTCCGATAAAAAAAGGTTTCCTCGAGGTGTTCCTCCAGAGTGCAGCT-AAAT-GATTG 892 Query 856 ATTCTTTGATG-A-A--TAAGTTACTTGGTATTGCCTTTGTAACTCAATTAAGTT-TT-T 909 |||||||||| | | ||||||||||| ||| |||||||||||||| ||| || | Sbjct 893 ATTCTTTGATTCATAAATAAGTTACTTGACGTTGTCTTTGTAACTCAATG--GTTCTTCT 950 Query 910 -ATCTAT--TTTTATCATTT-ATTTGTTGCTCATATATATGTGGTGTTTATGTAAAGATG 965 |||||| |||| ||| || ||||||| | || ||||||| | ||||| ||||| ||| Sbjct 951 TATCTATAATTTT-TCAATTCATTTGTTAC-CAAATATATGCG-TGTTTGTGTAA-GATC 1006 Query 966 TTT 968 ||| Sbjct 1007 TTT 1009 > AT5G48070.1 | Symbols: ATXTH20, XTH20 | xyloglucan endotransglucosylase/hydrolase 20 | chr5:19482106-19483452 FORWARD LENGTH=1122 Length=1122 Score = 597 bits (323), Expect = 6e-170 Identities = 457/523 (87%), Gaps = 4/523 (1%) Strand=Plus/Plus Query 41 TTGTGGTACAAGTTTTTCGTTCTTAATTCTGTTTCTTC-TTGCGGGACAATATGTGCATG 99 ||| |||| ||| || | ||||| ||| | |||| || |||| | |||||||| || || Sbjct 64 TTGCGGTAGAAGGTTCGCCTTCTTGATTATCTTTC-TCTTTGCAGCACAATATGAGCGTG 122 Query 100 TCTATGCGGGTAGCTTCCACAAAGACGTTCAGATACATTGGGGTGATGGCCGCGGAAAGA 159 |||| || |||||||| ||||| ||||||||||||||||||||||||||||| ||||| | Sbjct 123 TCTACGCTGGTAGCTTTCACAAGGACGTTCAGATACATTGGGGTGATGGCCGTGGAAAAA 182 Query 160 TTCACGACAAAGAT-GGAAAACTTCTTTCTCTCTCGCTCGACAAATCCTCTGGATCCGGT 218 ||| |||||| | | ||||| ||||||||||||||||||||||||| |||||| |||||| Sbjct 183 TTCTCGACAATG-TCGGAAATCTTCTTTCTCTCTCGCTCGACAAATTCTCTGGTTCCGGT 241 Query 219 TTTCAGTCTAACCAGGAGTTTCTCTATGGCAAAGCCGAGGTTCAAATGAAACTTGTTCCT 278 |||||||| | || |||||||| |||||||||| |||||||||||||||||||| ||| Sbjct 242 TTTCAGTCCCATCAAGAGTTTCTTTATGGCAAAGTAGAGGTTCAAATGAAACTTGTACCT 301 Query 279 GGTAATTCAGCTGGAACAGTAACAACATTCTATCTAAAATCGCCGGGAACTACGTGGGAT 338 ||||| || ||||||||||| |||||||||||||||||||| || |||||||| |||||| Sbjct 302 GGTAACTCTGCTGGAACAGTGACAACATTCTATCTAAAATCTCCTGGAACTACATGGGAT 361 Query 339 GAGATCGATTTCGAGTTCTTGGGAAACATAAGTGGTCATCCGTATACTCTCCATACTAAT 398 || || ||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct 362 GAAATAGATTTTGAGTTCTTGGGAAACATAAGTGGTCATCCATATACTCTTCATACTAAT 421 Query 399 GTTTACACAAAAGGCACAGGAGACAAAGAACAACAATTTCATCTATGGTTCGACCCAACC 458 ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct 422 GTTTACACAAAAGGCACAGGAGACAAAGAACAACAGTTTCATCTATGGTTTGACCCAACT 481 Query 459 GTTAACTTTCACACTTATTGCATCACATGGAATCCCCAAAGGATTATTTTTACGGTTGAT 518 ||| |||||||||||||||| |||| |||||||||||||||| | |||||||| | ||| Sbjct 482 GTTGACTTTCACACTTATTGTATCATATGGAATCCCCAAAGGGTCATTTTTACAATAGAT 541 Query 519 GGAATTCCTATTAGAGAGTTCAAAAACTCTGAGGCAATTGGAG 561 |||||||| || ||||| ||||| ||||| || || |||||| Sbjct 542 GGAATTCCGATAAGAGAATTCAAGAACTCCGAAGCCCTTGGAG 584 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 48626654296 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5