BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475591
Length=1380
Score E
Sequences producing significant alignments: (Bits) Value
AT1G65340.1 | Symbols: CYP96A3 | cytochrome P450, family 96, su... 1424 0.0
AT5G52320.1 | Symbols: CYP96A4 | cytochrome P450, family 96, su... 1038 0.0
AT2G21910.1 | Symbols: CYP96A5 | cytochrome P450, family 96, su... 121 2e-26
> AT1G65340.1 | Symbols: CYP96A3 | cytochrome P450, family 96,
subfamily A, polypeptide 3 | chr1:24268135-24269646 REVERSE
LENGTH=1512
Length=1512
Score = 1424 bits (771), Expect = 0.0
Identities = 897/959 (94%), Gaps = 4/959 (0%)
Strand=Plus/Plus
Query 258 GTTTAAGAAGATCTTTGAAGTCGTGGGTGATTCCATTTTCAACGTTGACTCGGGTTTGTG 317
||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 315 GTTCAAGAAGATCTTCGAAGTCGTGGGTGATTCAATTTTCAACGTTGACTCGGGTTTGTG 374
Query 318 GGAGGATATGAGGAACTCGTCTCATGCCATTTTTAGCCATCAAGATTTCCAAAGGTTCTG 377
|||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct 375 GGAGGATATGAGGAACTCGTCTCATGCCATTTTTAGTAATCAAGATTTCCAAATGTTCTG 434
Query 378 GGTGAG-AGCAAGTGTAA-ACAAATTAAGGCAAGGGCTTGTTCCTATTCTTGAGAACACT 435
|||||| | ||||||||| | |||||||||||||||||||||||||||||||| ||| |
Sbjct 435 GGTGAGTA-CAAGTGTAAGA-AAATTAAGGCAAGGGCTTGTTCCTATTCTTGAAAACGCA 492
Query 436 GCTGATAAAAATATTCTTGTAGACTTCCAAGATTTGTTCCAGAGATTCTTGTTTGATACA 495
|||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 493 GCTGATAAAAATATCCTTGTCGACTTGCAAGATTTGTTCCAGAGATTCTTGTTTGATACA 552
Query 496 TCTTTGATTTTGATGACCGGGTATGATCCAAAATGTTTATCCATTGAAATGCCTAAAGTC 555
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct 553 TCTTTGATTTTGATGACCGGGTATGATCCAAAATGTTTATCCGTTGAAATGCCTAAGGTT 612
Query 556 GAGTTTGGTGACGCGGTTGATGGTGTTTCAGACGGGGTTTTCTATAGGCATGTTAAGCCG 615
||||| ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 613 GAGTTCGGTGACGCGGTCGATGGTGTTTCTGACGGGGTTTTCTATAGACATGTTAAGCCG 672
Query 616 GTTTTCCTGTGGAGGTTCCAATATTGGATTGGTGTAGGAGTCGAGAAGCGATTGAAAAGA 675
|||||| |||||||| ||||||||| ||||||||||||||| ||||| |||||||||||
Sbjct 673 GTTTTCTTGTGGAGGCTCCAATATTTGATTGGTGTAGGAGTAGAGAAAAGATTGAAAAGA 732
Query 676 GGTCTTGCGGTTTTCGATCAACTTCTTGAGAAGATCATAACGACCAAAAGAGAGGAGATC 735
||||| ||||| ||||||||||| || ||||||||||||||| | ||| |||||||||||
Sbjct 733 GGTCTAGCGGTATTCGATCAACTACTCGAGAAGATCATAACGGCTAAACGAGAGGAGATC 792
Query 736 AAAAGTCATGGGACTGATCATCACTCAAGAGGAGAGGCCATAGACGTTTTGACATACTAC 795
|| |||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||
Sbjct 793 AATAGTCATGGGACTCATCATCCCTCAAGAGGAGAGGCCATAGACGTGTTGACATACTAC 852
Query 796 ATGACTGTGGACACGACCAAGTATAAGAACTTGAAACCGAGTGATGATAAATTCATCAAA 855
|||||| ||||||||||||| |||||| ||||| |||| |||||||||| ||||||||||
Sbjct 853 ATGACTATGGACACGACCAAATATAAGTACTTGGAACCAAGTGATGATAGATTCATCAAA 912
Query 856 GACACTATTTTGGGTTTCTTGATAGCGGCAAGAGACACAACAAGTTCAGCTCTCACTTGG 915
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 913 GACACTATTTTGGGTTTCTTGATAGCGGCAAGAGATACAACAAGTTCAGCACTCACTTGG 972
Query 916 TTCTTCTGGCTTCTGTCCAAGAACCCTGAAGCAATGAACAAGATTCGACAAGAGGTTAAC 975
|||||||||||| |||||||||||||||| ||||| |||||||| |||||||||||||||
Sbjct 973 TTCTTCTGGCTTATGTCCAAGAACCCTGAGGCAATAAACAAGATCCGACAAGAGGTTAAC 1032
Query 976 AAGAAGATGCCGAGGTTTAATCCCGCAGATTTAGACAAGCTCGTGTATCTACACGGTGCC 1035
|||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct 1033 AAGAAGATGCCGAGGTTTGATCCCGCAGATTTAGAAAAGCTCGTGTATCTACACGGTGCC 1092
Query 1036 GTGTGTGAGACGCTAAGGTTATATCCACCAGTCCCATTTAACCACAAGTCACCGGCAATG 1095
||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |
Sbjct 1093 GTGTGTGAGACGCTAAGGTTATACCCACCAGTTCCATTTAACCACAAGTCACCGGCAAAG 1152
Query 1096 CCAGACGTGCTTCCAAGTGGGCATAAAGTCGATGAGAATTGGAAGATTGTCATATCTATG 1155
|||||||| |||||||||||||||| ||| |||||||| |||||||||||||||||||||
Sbjct 1153 CCAGACGTACTTCCAAGTGGGCATAGAGTAGATGAGAAATGGAAGATTGTCATATCTATG 1212
Query 1156 TATGCATTAGGGAGGATGAAATCTGTTTGGGGAGATGACGCGGAAGATTTCAGACCAGA 1214
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1213 TATGCATTAGGGAGGATGAAATCTGTTTGGGGAGATGACGCAGAAGATTTCAGACCAGA 1271
Score = 405 bits (219), Expect = 6e-112
Identities = 245/258 (95%), Gaps = 0/258 (0%)
Strand=Plus/Plus
Query 1 ATGGCGATAGTCATAGGCTTACTTGAAATCTTCATAGCATTTGTTTTCTTCATTTTCTTC 60
||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct 1 ATGGCGATAGTCATAGGTTTACTTGAAATCTTCACAGCATTTGTTTTCTTCATTTTCTTC 60
Query 61 CAATATTTATTGCTCCACAAGAAATCTCCCAAGCCTTTGCTCACGAACTGGCCGGTCCTA 120
|||| |||||| |||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct 61 CAATGTTTATTACTCCACAAGAAAACTCCCAAGCCTTTGCTCACGAACTGGCCGGCCCTT 120
Query 121 GGGATGCTTCCGGGTCTGCTCCTCCAAGTGCCTCGTATCTACGACTGGATCACCGAGGTT 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 GGGATGCTTCCGGGTCTACTCCTCCAAGTGCCTCGTATCTACGACTGGATCACCGAGGTT 180
Query 181 CTTGAGGCCACCGATATGACGTTTTGTTTCAAAGGTCCATATCTTAGTGGAATGGACATC 240
|||||||| || |||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct 181 CTTGAGGCGACAGATATGACGTTTTGTTTCAAAGGTCCATGTCTTAGCGGAATGGACATC 240
Query 241 TTGCTCACTGTTGATCCG 258
||||| ||||||||||||
Sbjct 241 TTGCTTACTGTTGATCCG 258
Score = 274 bits (148), Expect = 2e-72
Identities = 160/166 (96%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 1215 AGCTTGCTTGGGAAAAAAGTTAACGTTCTTGCAGATGAAGACCGTGGCTGCGGAAATCAT 1274
|||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 1347 AGCTTGCTTGGGGAAAAAGTTAACGTTCTTACAGATGAAGACAGTGGCTGCGGAAATCAT 1406
Query 1275 ACGAAACTATGACATCAAGGTCGTTGAAGGGCACAAAACCGAACCTGTTCCTTCTGTTCT 1334
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1407 ACGAAACTATGACATCAAGGTCGTTGAAGGGCACAAAACCGAACCAGTTCCTTCTGTTCT 1466
Query 1335 TTTTCGCATGCAACATGGTCTCAAAGTTAATATCACTAAGATCTAG 1380
|||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct 1467 TTTTCGTATGCAACATGGTCTCAAAGTTAATATCACTAGGATCTAG 1512
> AT5G52320.1 | Symbols: CYP96A4 | cytochrome P450, family 96,
subfamily A, polypeptide 4 | chr5:21244978-21246682 REVERSE
LENGTH=1705
Length=1705
Score = 1038 bits (562), Expect = 0.0
Identities = 835/966 (86%), Gaps = 21/966 (2%)
Strand=Plus/Plus
Query 258 GTTTAAGAAGATCTTTGAAGTCGTGGGTGATTCCATTTTCAACGTTGACTCGGGTTTGTG 317
|||||| |||||||||||| || |||| ||| |||||||||||||||||||| |||||
Sbjct 378 GTTTAACAAGATCTTTGAATTCTTGGGAGATGGGATTTTCAACGTTGACTCGGGCTTGTG 437
Query 318 GGAGGATATGAGGAACTCGTCTCATGCCATTTTTAGCCATCAAGATTTCCAAAGGTTCTG 377
|||||||||||| |||||||||||||| ||||| |||||||||||||||||||| || |
Sbjct 438 GGAGGATATGAGAAACTCGTCTCATGCGATTTTCAGCCATCAAGATTTCCAAAGTTTTTC 497
Query 378 GGTGAG-AGCAAGTGTAAACAAATTAAGGCAAGGGCTTGTTCCTATTCTTGAGAACACTG 436
|||||| | |||| |||| ||||||||| ||||||||||||||||||||||| ||| |||
Sbjct 498 GGTGAGTA-CAAGCGTAAGCAAATTAAGTCAAGGGCTTGTTCCTATTCTTGATAACGCTG 556
Query 437 CTGATAAAAATATTCTTGTAGACTTCCAAGATTTGTTCCAGAGATTCTTGTTTGATACAT 496
||| ||| | |||||||| ||||| ||||||||||||||||||||||||||||| ||||
Sbjct 557 TTGAGAAACACATTCTTGTCGACTTGCAAGATTTGTTCCAGAGATTCTTGTTTGACACAT 616
Query 497 CTT-TGATTTTGATGACCGGGTATGATCCAAAATGTTTATCCATTGAAATGCCTAAAGTC 555
||| | | ||||||| | |||||||||||||||| | | ||| ||||||||||||| ||
Sbjct 617 CTTCT-ACTTTGATGGCTGGGTATGATCCAAAATCTCTCTCCGTTGAAATGCCTAAGGTT 675
Query 556 GAGTTTGGTGACGCGGTTGATGGTGTTTCAGACGGGGTTTTCTATAGGCATGTTAAGCCG 615
||||| | ||| ||| | ||||| ||| |||| | | |||||||| ||| | ||||||
Sbjct 676 GAGTTCGCTGATGCGATGGATGGAGTTGCAGATGCCATGTTCTATAGACATCTCAAGCCG 735
Query 616 GTTTTCCTGTGGAGGT-TCCAATATTGGATTGGTGTAGGAGTCGAGAAGC-GATTGAAAA 673
| |||||||||||| | |||||| |||||| ||||||||| | |||||| ||| || ||
Sbjct 736 GCTTTCCTGTGGAG-TATCCAATCTTGGATCGGTGTAGGAATAGAGAAGAAGAT-GAGAA 793
Query 674 GAGGTCTTG-CGGTTTTCGATCAACTTCTTGAGAAGATCATAACGACCAAAA-GAGAGGA 731
||||||| | || ||||||||||| | || | |||||||||| | | | ||| |||||||
Sbjct 794 GAGGTCTCGACG-TTTTCGATCAAATGCTAGGGAAGATCATATC-AGCTAAACGAGAGGA 851
Query 732 GATCAAAAGTCATGGGACTGATCATCACTCAAGAGGAGAGGCCATAGACGTTTTGACATA 791
|||||||| |||||||| | |||| |||||| |||||||||||| |||||||| |||||
Sbjct 852 GATCAAAAATCATGGGA-T--TCATGACTCAAAAGGAGAGGCCATGGACGTTTTAACATA 908
Query 792 CTACATGACTGTGGACACGACCAAGTATAAGA-ACTTGAAACCGAGTGATGATAAATTCA 850
||||||||| | ||||||||||| ||||| | |||||||||||||| | ||||||||||
Sbjct 909 TTACATGACTATAGACACGACCAAATATAA-ACACTTGAAACCGAGTAACGATAAATTCA 967
Query 851 TCAAAGACACTATTTTGGGT-TTCTTGATAGCGGCAAGAGACACAACAAGTTCAGCTCTC 909
||| |||||||||||||||| || | ||||||||||||||||||||| || |||||||||
Sbjct 968 TCAGAGACACTATTTTGGGTCTTGT-GATAGCGGCAAGAGACACAACCAGCTCAGCTCTC 1026
Query 910 ACTTGGTTCTTCTGGCTTCTGTCCAAGAACCCTGAAGCAATGAACAAGATTCGACAAGAG 969
|||||||| ||||||||||| || ||||||||||||||||||| |||||| |||||||||
Sbjct 1027 ACTTGGTTTTTCTGGCTTCTCTCTAAGAACCCTGAAGCAATGACCAAGATCCGACAAGAG 1086
Query 970 GTTAACAAGAAGATGCCGAGGTTTAATCCCGCAGATTTAGACAAGCTCGTGTATCTACAC 1029
|||||||||||||||| | |||| |||| ||||||||||||||||||||||| ||| ||
Sbjct 1087 ATTAACAAGAAGATGCCAAAGTTTGATCCGGCAGATTTAGACAAGCTCGTGTACCTAGAC 1146
Query 1030 GGTGCCGTGTGTGAGACGCTAAGGTTATATCCACCAGTCCCATTTAACCACAAGTCACCG 1089
|||||||||||||||||||||||| |||| ||| |||||||||| |||||||||||||||
Sbjct 1147 GGTGCCGTGTGTGAGACGCTAAGGCTATACCCATCAGTCCCATTCAACCACAAGTCACCG 1206
Query 1090 GCAATGCCAGACGTGCTTCCAAGTGGGCATAAAGTCGATGAGAATTGGAAGATTGTCATA 1149
|||| ||||||||||||||||||||| |||||||| ||| ||||||||| | | || ||
Sbjct 1207 GCAAAGCCAGACGTGCTTCCAAGTGGTCATAAAGTTGATAAGAATTGGAGGGTAGTAATC 1266
Query 1150 TCTATGTATGCATTAGGGAGGATGAAATCTGTTTGGGGAGATGACGCGGAAGATTT-CAG 1208
|||| ||| ||||||| ||||||||||||||||||||||||||||| |||||||| | |
Sbjct 1267 CCTATTTATTCATTAGGCAGGATGAAATCTGTTTGGGGAGATGACGCAGAAGATTTTC-G 1325
Query 1209 ACCAGA 1214
||||||
Sbjct 1326 ACCAGA 1331
> AT2G21910.1 | Symbols: CYP96A5 | cytochrome P450, family 96,
subfamily A, polypeptide 5 | chr2:9341498-9343030 FORWARD LENGTH=1533
Length=1533
Score = 121 bits (65), Expect = 2e-26
Identities = 123/151 (81%), Gaps = 3/151 (2%)
Strand=Plus/Plus
Query 1212 AGAAGCTTGCTTGGGAAAAAAGTTAACGTTCTTGCAGATGAAGACCGTGGCTGCGGAAAT 1271
|||| | |||||||| ||||| ||| | ||||||||||||||||| || |||| || ||
Sbjct 1354 AGAAAC-TGCTTGGGGAAAAATTTATCTTTCTTGCAGATGAAGACAGTAGCTGTTGAGAT 1412
Query 1272 CATACGAAACTATGACATCAAGGTCGTTGAAGGGCACAAAACCGAACCTG-TTCCTTCTG 1330
||||||||| ||||||||||||||||||||||||||||| | ||| || | ||| |||
Sbjct 1413 CATACGAAATTATGACATCAAGGTCGTTGAAGGGCACAAGATCGAGCCAGCTTC-TTCCA 1471
Query 1331 TTCTTTTTCGCATGCAACATGGTCTCAAAGT 1361
| | ||| |||| ||||||| || |||||
Sbjct 1472 TAATCCTTCACATGAAACATGGCCTTAAAGT 1502
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 67971537930
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5