BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475629
Length=1023
Score E
Sequences producing significant alignments: (Bits) Value
AT1G65310.1 | Symbols: ATXTH17, XTH17 | xyloglucan endotransglu... 1543 0.0
AT4G30280.1 | Symbols: ATXTH18, XTH18 | xyloglucan endotransglu... 1378 0.0
AT4G30290.1 | Symbols: ATXTH19, XTH19 | xyloglucan endotransglu... 1011 0.0
AT5G48070.1 | Symbols: ATXTH20, XTH20 | xyloglucan endotransglu... 896 0.0
> AT1G65310.1 | Symbols: ATXTH17, XTH17 | xyloglucan endotransglucosylase/hydrolase
17 | chr1:24257216-24258473 FORWARD LENGTH=1049
Length=1049
Score = 1543 bits (835), Expect = 0.0
Identities = 953/1008 (95%), Gaps = 15/1008 (1%)
Strand=Plus/Plus
Query 27 AAAATGAAGCTTTCTTGTGGTACAAGTTTTTCGTTCTTAATTCTGTTTCTTCTTGCGGGA 86
|||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||| |
Sbjct 44 AAAATGAAGCTTTCTTGTGGTACAAGCTTTGCGTTCTTACTTCTGTTTCTTCTTGCGGCA 103
Query 87 CAATATGTGCATGTCTATGCGGGTAGCTTCCACAAAGACGTTCAGATACATTGGGGTGAT 146
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 104 CAATCTGTGCATGTCTATGCGGGTAGCTTCCACAAAGACGTTCAGATACATTGGGGTGAT 163
Query 147 GGCCGCGGAAAGATTCACGACAAAGATGGAAAACTTCTTTCTCTCTCGCTCGACAAATCC 206
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 164 GGCCGCGGAAAGATTCACGACAGAGATGGAAAACTTCTTTCTCTCTCGCTCGACAAATCC 223
Query 207 TCTGGATCCGGTTTTCAGTCTAACCAGGAGTTTCTCTATGGCAAAGCCGAGGTTCAAATG 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 224 TCTGGATCCGGTTTTCAGTCTAACCAGGAGTTTCTCTATGGCAAAGCCGAGGTTCAAATG 283
Query 267 AAACTTGTTCCTGGTAATTCAGCTGGAACAGTAACAACATTCTATCTAAAATCGCCGGGA 326
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct 284 AAACTTGTTCCTGGTAATTCAGCTGGAACAGTGACAACATTCTATCTAAAATCTCCGGGA 343
Query 327 ACTACGTGGGATGAGATCGATTTCGAGTTCTTGGGAAACATAAGTGGTCATCCGTATACT 386
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 344 ACTACGTGGGATGAGATCGATTTCGAGTTCTTGGGAAACATAAGTGGTCATCCATATACT 403
Query 387 CTCCATACTAATGTTTACACAAAAGGCACAGGAGACAAAGAACAACAATTTCATCTATGG 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 404 CTCCATACTAATGTTTACACAAAAGGCACAGGAGACAAAGAACAACAATTTCATCTATGG 463
Query 447 TTCGACCCCACCGTTAATTTTCACACTTATTGCATCACATGGAATCCCCAAAGGATTATT 506
|||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 464 TTCGACCCAACCGTTAACTTTCACACTTATTGCATCACATGGAATCCTCAAAGGATTATT 523
Query 507 TTTACGGTTGATGGAATTCCTATTAGAGAGTTCAAAAACTCTGAGGCAATTGGAGTTCCG 566
||||||||||||||||||||||||||||||||||| ||| | ||||| |||||||| |||
Sbjct 524 TTTACGGTTGATGGAATTCCTATTAGAGAGTTCAAGAACCCCGAGGCGATTGGAGTCCCG 583
Query 567 TTCCCAACGAGACAACCAATGAGGCTCTACGCGAGTCTCTGGGAAGCCGAGCATTGGGCA 626
|||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 584 TTCCCAACTAGACAACCAATGAGACTCTACGCGAGTCTTTGGGAAGCCGAGCATTGGGCA 643
Query 627 ACAAGAGGAGGATTAGAGAAAACAGATTGGTCAAAAGCTCCTTTTACTGCTTTCTACAGA 686
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 644 ACAAGAGGAGGATTAGAGAAAACAGATTGGTCAAAAGCTCCTTTTACTGCTTTTTATAGA 703
Query 687 AACTACAATGTCGATGGATGTGTATGGGCTAACGGAAAATCATCATGTTCCGAGAATTCC 746
|||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||
Sbjct 704 AACTACAATGTCGATGGATGTGTATGGGCTAATGGAAAATCATCTTGTTCCGCGAATTCC 763
Query 747 CCATGGTTCACTCAAAAACTCGATTCAAACGGCCAGACAAGAATGAAAGGTGTACAAAGT 806
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 764 CCATGGTTCACTCAAAAACTCGATTCGAACGGCCAGACAAGAATGAAAGGTGTGCAAAGT 823
Query 807 AAATACATGATCTACAACTATTGCACCGATAAAAGAAGGTTTCCTCGCG-ATGTTCCTGC 865
||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||
Sbjct 824 AAATACATGATCTACAACTATTGCACCGATAAAAGAAGGTTTCCTCGAGGA-GTTCCTGC 882
Query 866 AGTGTGCACTTAAATTGTTGATTCTTTGAT----GAATAAGTTACTTGGTATTGCCTTTG 921
| ||||||||||||| ||||||||||||| ||||| ||||||||| ||||||||||
Sbjct 883 CGAGTGCACTTAAATTCTTGATTCTTTGATACATGAATATGTTACTTGGCATTGCCTTTG 942
Query 922 TAACTCAATTAAGtttttatctatttttatcatttatttgttgctcatatata---t--g 976
||||||||| |||||||||| |||||||||||||||||||||||||||||||| | |
Sbjct 943 TAACTCAATCAAGTTTTTATTTATTTTTATCATTTATTTGTTGCTCATATATACAGTATG 1002
Query 977 tggtttttatGTAAAGATGTTTGCA-A--GAAGTAATAAATATAAATT 1021
|||| ||| ||||| ||||||| | | ||||||||||| |||||||
Sbjct 1003 TGGTGTTTGTGTAA-GATGTTTTAAGATTGAAGTAATAAAAATAAATT 1049
> AT4G30280.1 | Symbols: ATXTH18, XTH18 | xyloglucan endotransglucosylase/hydrolase
18 | chr4:14825808-14827047 REVERSE LENGTH=1048
Length=1048
Score = 1378 bits (746), Expect = 0.0
Identities = 922/1006 (92%), Gaps = 15/1006 (1%)
Strand=Plus/Plus
Query 27 AAAATGAAGCTTTCTTGTGGTACAAGTTTTTCGTTCTTAATTCTGTTTCTTC-TTGCGGG 85
|||||||||||||||||||||||||||||| ||||||| ||| |||||| || ||||||
Sbjct 47 AAAATGAAGCTTTCTTGTGGTACAAGTTTTGCGTTCTTGATTATGTTTC-TCTTTGCGGC 105
Query 86 ACAATATGTGCATGTCTATGCGGGTAGCTTCCACAAAGACGTTCAGATACATTGGGGTGA 145
||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 106 ACAATCTATGCATGTCTATGCGGGTAGCTTCCACAAAGATGTTCAGATACATTGGGGTGA 165
Query 146 TGGCCGCGGAAAGATTCACGACAAAGATGGAAAACTTCTTTCTCTCTCGCTCGACAAATC 205
||||| |||||| | | ||||| ||||||||| ||||| ||||||||||||||||||||
Sbjct 166 CGGCCGTGGAAAGGTGCGCGACAGAGATGGAAAGCTTCTATCTCTCTCGCTCGACAAATC 225
Query 206 CTCTGGATCCGGTTTTCAGTCTAACCAGGAGTTTCTCTATGGCAAAGCCGAGGTTCAAAT 265
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 226 CTCTGGATCCGGTTTTCAGTCCAACCAGGAGTTTCTCTATGGCAAAGCCGAGGTTCAAAT 285
Query 266 GAAACTTGTTCCTGGTAATTCAGCTGGAACAGTAACAACATTCTATCTAAAATCGCCGGG 325
||||||||| |||||||| ||||||||||||||||||||||||||||| || || |||||
Sbjct 286 GAAACTTGTCCCTGGTAACTCAGCTGGAACAGTAACAACATTCTATCTTAAGTCTCCGGG 345
Query 326 AACTACGTGGGATGAGATCGATTTCGAGTTCTTGGGAAACATAAGTGGTCATCCGTATAC 385
|||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||
Sbjct 346 AACTACGTGGGATGAGATTGATTTCGAGTTCTTAGGAAACCTAAGTGGTCATCCGTATAC 405
Query 386 TCTCCATACTAATGTTTACACAAAAGGCACAGGAGACAAAGAACAACAATTTCATCTATG 445
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 406 TCTCCATACTAATGTTTACACAAAAGGCTCAGGAGACAAAGAACAACAATTTCATCTATG 465
Query 446 GTTCGACCCCACCGTTAATTTTCACACTTATTGCATCACATGGAATCCCCAAAGGATTAT 505
||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 466 GTTCGACCCAACTGTTAACTTTCACACTTATTGCATCACATGGAATCCCCAAAGGATTAT 525
Query 506 TTTTACGGTTGATGGAATTCCTATTAGAGAGTTCAAAAACTCTGAGGCAATTGGAGTTCC 565
|||||| ||||||||||||||||||||||||||||| ||||| ||| |||||||||||||
Sbjct 526 TTTTACAGTTGATGGAATTCCTATTAGAGAGTTCAAGAACTCCGAGTCAATTGGAGTTCC 585
Query 566 GTTCCCAACGA-GACAACCAATGAGGCTCTACGCGAGTCTCTGGGAAGCCGAGCATTGGG 624
||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 586 GTTCCCAACGAAG-CAACCAATGAGGCTTTACGCGAGTCTCTGGGAAGCCGAGCATTGGG 644
Query 625 CAACAAGAGGAGGATTAGAGAAAACAGATTGGTCAAAAGCTCCTTTTACTGCTTTCTACA 684
| ||||| ||||| ||||||||||||||||||||||| |||||||| || ||||||||||
Sbjct 645 CTACAAGGGGAGGGTTAGAGAAAACAGATTGGTCAAAGGCTCCTTTCACCGCTTTCTACA 704
Query 685 GAAACTACAATGTCGATGGATGTGTATGGGCTAACGGAAAATCATCATGTTCCG-AGAAT 743
||||||||||||| || ||||||||||||||||| ||||||||||| ||| ||| | |||
Sbjct 705 GAAACTACAATGTTGAAGGATGTGTATGGGCTAATGGAAAATCATCTTGTCCCGCA-AAT 763
Query 744 TCCCCATGGTTCACTCAAAAACTCGATTCAAACGGCCAGACAAGAATGAAAGGTGTACAA 803
||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct 764 TCCTCATGGTTCACTCAACAACTCGATTCAAACGGCCAGACAAGAATGAAAGGGGTACAG 823
Query 804 AGTAAATACATGATCTACAACTATTGCACCGATAAAAGAAGGTTTCCTCGCGATGTTCCT 863
||||| |||||| ||||||||||||| | ||| ||||||||||||||||| | |||||||
Sbjct 824 AGTAAGTACATGGTCTACAACTATTGTAACGACAAAAGAAGGTTTCCTCGAGGTGTTCCT 883
Query 864 GCAGTGTGCACTTAAATTGTTGATTCTTTGAT----GAATAAGTTACTTGGTATTGCCTT 919
| || ||||| ||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct 884 GTAGAGTGCAGTTAAATTGTTGATTCTTTGATACATGAATAAGTTACTTGGCATTGCCTT 943
Query 920 TGTAACTCAATTAAGtttttatc-tatttttatcatttatttgttgctcatatatatgtg 978
||||||||||| |||| ||| | ||||||||||||| ||||||||||||||| |||| |
Sbjct 944 AGTAACTCAATTGAGTTCTTA-CATATTTTTATCATTCATTTGTTGCTCATATGTATGCG 1002
Query 979 gtttttatGTAAAGATG-TTTGCAAGAAGTAATAAATATAAATTAT 1023
|| ||| ||||| |||| ||| ||||||||||||| |||||||||
Sbjct 1003 GTGTTTGTGTAA-GATGATTTT-AAGAAGTAATAAAAATAAATTAT 1046
> AT4G30290.1 | Symbols: ATXTH19, XTH19 | xyloglucan endotransglucosylase/hydrolase
19 | chr4:14828712-14830016 REVERSE LENGTH=1127
Length=1127
Score = 1011 bits (547), Expect = 0.0
Identities = 835/970 (86%), Gaps = 36/970 (4%)
Strand=Plus/Plus
Query 50 AAGT-TTTT-CGTTCTTAATTCTGTTTCTTC-TTGCGGGACAATATGTGCA-TGTCTATG 105
|||| |||| ||||||| ||||| |||| || |||| | ||||| | | || |||||||
Sbjct 55 AAGTCTTTTACGTTCTTGATTCTCTTTC-TCTTTGCAGCACAATCTAT-CAGCGTCTATG 112
Query 106 CGGGTAGCTTCCACAAAGACGTTCAGATACATTGGGGTGATGGCCGCGGAAAGATTCACG 165
| || |||||||||||||||||| ||||||||||||||||||| || |||||||||||||
Sbjct 113 CAGGCAGCTTCCACAAAGACGTTAAGATACATTGGGGTGATGGTCGTGGAAAGATTCACG 172
Query 166 ACAAAGATGGAAAACTTCTTTCTCTCTCGCTCGACAAATCCTCTGGATCCGGTTTTCAGT 225
| || | || |||||||| ||||||||||| |||||||||||||| || ||||| || |
Sbjct 173 ATAATCAAGGGAAACTTCTATCTCTCTCGCTTGACAAATCCTCTGGTTCAGGTTTCCAAT 232
Query 226 CTAACCAGGAGTTTCTCTATGGCAAAGCCGAGGTTCAAATGAAACTTGTTCCTGGTAATT 285
|||| || |||||||||||||| |||||||| ||||||||||||||||| |||||||| |
Sbjct 233 CTAATCAAGAGTTTCTCTATGGTAAAGCCGAAGTTCAAATGAAACTTGTCCCTGGTAACT 292
Query 286 CAGCTGGAACAGTAACAACATTCTATCTAAAATCGCCGGGAACTACGTGGGATGAGATCG 345
| |||||||| || |||||||||||||| ||||| ||||||||||| ||||||||||| |
Sbjct 293 CTGCTGGAACCGTCACAACATTCTATCTTAAATCTCCGGGAACTACATGGGATGAGATTG 352
Query 346 ATTTCGAGTTCTTGGGAAACATAAGTGGTCATCCGTATACTCTCCATACTAATGTTTACA 405
|||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 353 ATTTCGAGTTTTTGGGGAACATAAGTGGTCATCCATATACTCTCCATACTAATGTTTACA 412
Query 406 CAAAAGGCACAGGAGACAAAGAACAACAATTTCATCTATGGTTCGACCCCACCGTTAATT 465
|||||||| |||||||||||||||||||||||||||||||||| ||||| |||| ||| |
Sbjct 413 CAAAAGGCTCAGGAGACAAAGAACAACAATTTCATCTATGGTTTGACCCAACCGCTAACT 472
Query 466 TTCACACTTATTGCATCACATGGAATCCCCAAAGGATTATTTTTACGGTTGATGGAATTC 525
|||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||||
Sbjct 473 TTCACACTTATTGCATCACATGGAATCCACAAAGAATTATTTTTACCGTTGATGGGATTC 532
Query 526 CTATTAGAGAGTTCAAAAACT-CTGAGGCAATTGGAGTTCCGTTCCCAACGAGA-CAACC 583
| ||||||||||| | || | | ||| || |||||| || |||||||| | | |||||
Sbjct 533 CAATTAGAGAGTTTATGAA-TGCCGAGTCACGTGGAGTCCCATTCCCAAC-AAAGCAACC 590
Query 584 AATGAGGCTCTACGCGAGTCTCTGGGAAGCCGAGCATTGGGCAACAAGAGGAGGATTAGA 643
||||||||| || |||||||| |||||||| ||||||||||| ||||| |||||||||||
Sbjct 591 AATGAGGCTATATGCGAGTCTATGGGAAGCAGAGCATTGGGCTACAAGGGGAGGATTAGA 650
Query 644 GAAAACAGATTGGTCAAAAGCTCCTTTTACTGCTT-TCTACAGAAACTACAATGTCGATG 702
||||||||||||||||||||||||||| || |||| | |||||||||||||||||||| |
Sbjct 651 GAAAACAGATTGGTCAAAAGCTCCTTTCACCGCTTAT-TACAGAAACTACAATGTCGAGG 709
Query 703 GATGTGTATGGGCTAACGGAAAATCA-TCATGTTCCG-AGAATTCCCCATGGTTCACTCA 760
|||||||||||| ||| ||||| ||| | ||| ||| | ||||||| ||||||||||||
Sbjct 710 GATGTGTATGGGTTAATGGAAAGTCAGTT-TGTCCCGCA-AATTCCCAATGGTTCACTCA 767
Query 761 AAAACTCGATTCAAACGGCCAGACAAGAATGAAAGGTGTACAAAGTAAATACATGATCTA 820
|||||||||||| || |||||||||||||||||||| ||||| |||||||||||| | ||
Sbjct 768 AAAACTCGATTCGAATGGCCAGACAAGAATGAAAGGGGTACAGAGTAAATACATGGTTTA 827
Query 821 CAACTATTGCACCGATAAAAGAAGGTTTCCTCGCGATGTTCCTGCAGTGTGCA-CTTAAA 879
|||||||||| ||||||||| |||||||||||| | ||||||| ||| ||||| || |||
Sbjct 828 CAACTATTGCTCCGATAAAAAAAGGTTTCCTCGAGGTGTTCCTCCAGAGTGCAGCT-AAA 886
Query 880 TTG-TTGATTCTTTGATG-A-A--TAAGTTACTTGGTATTGCCTTTGTAACTCAATTAAG 934
| | ||||||||||||| | | ||||||||||| ||| |||||||||||||| |
Sbjct 887 T-GATTGATTCTTTGATTCATAAATAAGTTACTTGACGTTGTCTTTGTAACTCAATG--G 943
Query 935 tt-tt-t-atctat--ttttatcattt-atttgttgctcatatatatgtggtttttatGT 988
|| || | |||||| |||| ||| || ||||||| | || ||||||| | | ||| |||
Sbjct 944 TTCTTCTTATCTATAATTTT-TCAATTCATTTGTTAC-CAAATATATGCG-TGTTTGTGT 1000
Query 989 AAAGATGTTT 998
|| ||| |||
Sbjct 1001 AA-GATCTTT 1009
> AT5G48070.1 | Symbols: ATXTH20, XTH20 | xyloglucan endotransglucosylase/hydrolase
20 | chr5:19482106-19483452 FORWARD LENGTH=1122
Length=1122
Score = 896 bits (485), Expect = 0.0
Identities = 782/924 (85%), Gaps = 26/924 (3%)
Strand=Plus/Plus
Query 41 TTGTGGTACAAGTTTTTCGTTCTTAATTCTGTTTCTTC-TTGCGGGACAATATGTGCATG 99
||| |||| ||| || | ||||| ||| | |||| || |||| | |||||||| || ||
Sbjct 64 TTGCGGTAGAAGGTTCGCCTTCTTGATTATCTTTC-TCTTTGCAGCACAATATGAGCGTG 122
Query 100 TCTATGCGGGTAGCTTCCACAAAGACGTTCAGATACATTGGGGTGATGGCCGCGGAAAGA 159
|||| || |||||||| ||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct 123 TCTACGCTGGTAGCTTTCACAAGGACGTTCAGATACATTGGGGTGATGGCCGTGGAAAAA 182
Query 160 TTCACGACAAAGAT-GGAAAACTTCTTTCTCTCTCGCTCGACAAATCCTCTGGATCCGGT 218
||| |||||| | | ||||| ||||||||||||||||||||||||| |||||| ||||||
Sbjct 183 TTCTCGACAATG-TCGGAAATCTTCTTTCTCTCTCGCTCGACAAATTCTCTGGTTCCGGT 241
Query 219 TTTCAGTCTAACCAGGAGTTTCTCTATGGCAAAGCCGAGGTTCAAATGAAACTTGTTCCT 278
|||||||| | || |||||||| |||||||||| |||||||||||||||||||| |||
Sbjct 242 TTTCAGTCCCATCAAGAGTTTCTTTATGGCAAAGTAGAGGTTCAAATGAAACTTGTACCT 301
Query 279 GGTAATTCAGCTGGAACAGTAACAACATTCTATCTAAAATCGCCGGGAACTACGTGGGAT 338
||||| || ||||||||||| |||||||||||||||||||| || |||||||| ||||||
Sbjct 302 GGTAACTCTGCTGGAACAGTGACAACATTCTATCTAAAATCTCCTGGAACTACATGGGAT 361
Query 339 GAGATCGATTTCGAGTTCTTGGGAAACATAAGTGGTCATCCGTATACTCTCCATACTAAT 398
|| || ||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 362 GAAATAGATTTTGAGTTCTTGGGAAACATAAGTGGTCATCCATATACTCTTCATACTAAT 421
Query 399 GTTTACACAAAAGGCACAGGAGACAAAGAACAACAATTTCATCTATGGTTCGACCCCACC 458
||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||
Sbjct 422 GTTTACACAAAAGGCACAGGAGACAAAGAACAACAGTTTCATCTATGGTTTGACCCAACT 481
Query 459 GTTAATTTTCACACTTATTGCATCACATGGAATCCCCAAAGGATTATTTTTACGGTTGAT 518
||| | |||||||||||||| |||| |||||||||||||||| | |||||||| | |||
Sbjct 482 GTTGACTTTCACACTTATTGTATCATATGGAATCCCCAAAGGGTCATTTTTACAATAGAT 541
Query 519 GGAATTCCTATTAGAGAGTTCAAAAACTCTGAGGCAATTGGAGTTCCGTTCCCAACG-AG 577
|||||||| || ||||| ||||| ||||| || || |||||||||| ||||||| | |
Sbjct 542 GGAATTCCGATAAGAGAATTCAAGAACTCCGAAGCCCTTGGAGTTCCCTTCCCAAAGCAT 601
Query 578 ACAACCAATGAGGCTCTACGCGAGTCTCTGGGAAGCCGAGCATTGGGCAACAAGAGGAGG 637
||||||||||||||||| || || || |||||||||||||||||||| |||||||||||
Sbjct 602 -CAACCAATGAGGCTCTATGCTAGCCTTTGGGAAGCCGAGCATTGGGCTACAAGAGGAGG 660
Query 638 ATTAGAGAAAACAGATTGGTCAAAAGCTCCTTTTACTGCTTTCTACAGAAACTACAATGT 697
||||||||||||||| ||||| ||||||||||| || |||||||||||||||||||||||
Sbjct 661 ATTAGAGAAAACAGACTGGTCCAAAGCTCCTTTCACCGCTTTCTACAGAAACTACAATGT 720
Query 698 CGATGGATGTGTATGGGCTAACGGAAAATCATCATGTTCCGAGAATTCCCCATGGTTCAC 757
|||| |||||| ||| | || |||||||||||||| || | ||||||| ||||||| ||
Sbjct 721 GGATGCATGTGTGTGGTCCAATGGAAAATCATCATGCTCTGCGAATTCCTCATGGTTTAC 780
Query 758 TCAAAAACTCGATT-CAAACGGCCAGACA-AGAATGAAA-GGTGTACAAAGTAAA-TACA 813
|||| ||| |||| |||| ||| ||| | ||| ||||| || | ||| || ||| ||||
Sbjct 781 TCAAGTACTTGATTTCAAA-GGCAAGA-ATAGAGTGAAATGG-GCACAGAG-AAAGTACA 836
Query 814 TGATCTACAACTATTGCACCGATAA-AAGAAGGTTTCCTCGCGATGTTCCTGCAGTGTGC 872
|| |||||||||||||||| ||||| || ||| ||||||| | || |||| ||| ||||
Sbjct 837 TGGTCTACAACTATTGCACTGATAAGAA-AAGATTTCCTCAAGGTGCTCCTCCAGAGTGC 895
Query 873 ACTTAAATTGTTGATT-CTTTGAT----GAAT-AAGTTACTTGGTATTGCCTTTGTAACT 926
| |||||| ||||| ||| ||| |||| || | || ||| |||| |||||||||
Sbjct 896 AGTTAAATAACTGATTGCTT-GATTCACGAATTAA-TCACGTGGCATTGTCTTTGTAACG 953
Query 927 CAATTAAGtttttatctat-tttt 949
|| | | | ||||||||| ||||
Sbjct 954 GAAATGA-TGTTTATCTATATTTT 976
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 50133678706
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5