BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475653
Length=2244
Score E
Sequences producing significant alignments: (Bits) Value
AT1G65540.1 | Symbols: | LETM1-like protein | chr1:24362382-24... 3430 0.0
AT3G59820.2 | Symbols: | LETM1-like protein | chr3:22098028-22... 582 4e-165
> AT1G65540.1 | Symbols: | LETM1-like protein | chr1:24362382-24366011
REVERSE LENGTH=2211
Length=2211
Score = 3430 bits (1857), Expect = 0.0
Identities = 2015/2094 (96%), Gaps = 0/2094 (0%)
Strand=Plus/Plus
Query 151 CGTGATTTTAAAGATGTCAAGAATAAAGAGTCGACCGGGTTATTGGAGGGGTTCTATACA 210
||||||||||||||||| ||||| |||||||||| || |||| ||||||||||||||| |
Sbjct 118 CGTGATTTTAAAGATGTGAAGAAGAAAGAGTCGAGCGTGTTAATGGAGGGGTTCTATAGA 177
Query 211 AGTAGATTACTTCAGTCTCCAAATTTTAGTAATGGAGTTGGAAGATTAGAATTCCCTTAT 270
|||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||
Sbjct 178 AGTAGATTACTTCAGTCTCCAAGTTTTAGTAATGGAGTTGGAATATTAGAATTGCCTTAT 237
Query 271 CCTTTGGGATATAGATTGGTTCGACAATCTATGTACTCCTCTTTGGCAACGGCTAACAAG 330
||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||
Sbjct 238 CCTTTGGGATATAGATTGGTTTTTCAATCTATGTACTCGTCTTTGGCAACGGCTAATAAG 297
Query 331 CCTGACCATGATAAAAAGGGAGAAAAGGTTACTTTGCAAACCAAAGAAGCTTCTCCTGAG 390
|||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||
Sbjct 298 CCTGACCATGATAAAAAGGGAGAAAAGGTTACCTCGCAAACTAAAGAAGCTTCTCCTGAG 357
Query 391 GAGTGTGATGAAGCTGTTGAGGGATTGAGTTTGGCTAAGGCTAAAGCTAAAGCCATGAAA 450
||||||||||| ||||||||||| || ||||| |||||||||||||||||||| ||||||
Sbjct 358 GAGTGTGATGAGGCTGTTGAGGGGTTAAGTTTAGCTAAGGCTAAAGCTAAAGCTATGAAA 417
Query 451 TTGGAAGAATCACAGAAATCTGATATATCCATTATGCAACGTGTGCGGTCGTTTCTTCTG 510
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 418 TTGGAAGAATCACAGAAATCTGATATATCCATTATGCAACGTGTGCGGTTGTTTCTTCTG 477
Query 511 GGAATAGGTCCTGCTTTGAGAGCTATTGCATCGATGAGCAGGGAAGATTGGGCTAAGAAG 570
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 478 GGGATAGGTCCTGCTTTGAGAGCTATTGCATCAATGAGCAGGGAAGATTGGGCTAAGAAG 537
Query 571 CTTCGTCACTGGAAAGATGAATTTAAATCTACTCTCCAACACTACTGGCTGGGGACAAAG 630
|||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||
Sbjct 538 CTTCGTCACTGGAAAGATGAATTTAAGTCTACTCTGCAACATTACTGGCTGGGGACAAAG 597
Query 631 TTGCTCTGGGCTGATGTCAGGATCAGTGTAAGGCTGCTTGTTAAACTTGCTAATGGAAAA 690
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 598 TTGCTTTGGGCTGATGTCAGGATCAGTGTAAGGCTGCTTGTTAAACTTGCTAATGGAAAA 657
Query 691 GGTCTCTCTAGGAGGGAACGACAACAACTCACTCGAACAACTGCCGACATTTTTAGATTA 750
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 658 GGTCTATCTAGGAGGGAACGACAACAACTCACTCGAACAACTGCCGACATTTTTAGATTA 717
Query 751 GTCCCGGTTGCAGTTTTCATTATTGTTCCATTCATGGAGTTCTTGCTACCGGTATTTCTT 810
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 718 GTCCCGGTTGCAGTTTTCATTATTGTTCCATTCATGGAGTTTTTGCTACCGGTGTTTCTT 777
Query 811 AAGCTGTTCCCAAACATGTTGCCGTCAACTTTCCAGGACAAGATGAAAGAAGAGGAGGCT 870
||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct 778 AAGTTGTTCCCAAACATGCTGCCGTCAACTTTCCAGGATAAGATGAAAGAAGAGGAGGCT 837
Query 871 CTAAAAAGAAGGTTGAATGCAAGAATGGAGTATGCTAAGTTTCTCCAAGATACTGTTAAA 930
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 838 CTAAAAAGAAGGTTGAATGCAAGAATGGAATATGCTAAGTTTCTCCAAGATACTGTCAAA 897
Query 931 GAAATGGCAAAGGAAGTCCAAACCTCTCGCAGTGGGGAGATAAAAAAGACTGCAGAAGAT 990
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 898 GAAATGGCAAAGGAAGTCCAAACCTCTCGCAGTGGAGAGATAAAGAAGACTGCAGAAGAT 957
Query 991 CTTGATGGATTTATGAACAAGGTCAGAAGAGGAGTTGGTGTTTCAAATGATGAAATTTTG 1050
|| ||||||||||||| |||||| ||||||||||| |||||||| |||||||||||||||
Sbjct 958 CTAGATGGATTTATGACCAAGGTTAGAAGAGGAGTCGGTGTTTCGAATGATGAAATTTTG 1017
Query 1051 GGATTTGCAAAGCTCTTCAATGATGAGCTTACATTGGATAACATTAACAGGTCTCGATTG 1110
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1018 GGCTTTGCAAAGCTCTTCAATGATGAGCTTACATTGGATAACATTAACAGGTCCCGATTG 1077
Query 1111 GTAAATATGTGCAAATACATGGGTATTAGCCCATTTGGAACTGATGCATATTTGCGTTAT 1170
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 1078 GTAAATATGTGCAAATACATGGGTATTAGCCCATTCGGAACTGATGCATATTTACGTTAT 1137
Query 1171 ATGCTTCGGAAAAGATTACAGGAGATTAAAAAGGATGATAAGTTGATCAAGGCTGAAGGT 1230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1138 ATGCTTCGGAAAAGATTACAGGAGATTAAAAAGGATGATAAGTTGATCAAGGCTGAAGGT 1197
Query 1231 GTGGAGTCTCTCTCAGAAGCTGAACTTCGCCAAGCTTGCAGAGAGAGAGGAATGCTTCAA 1290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1198 GTGGAGTCTCTCTCAGAAGCTGAACTTCGCCAAGCTTGCAGAGAGAGAGGAATGCTTCAA 1257
Query 1291 TTGGGTTCAGTTGAAGAAATGAGAGAGCAGCTAATTGACTGGCTGGATTTATCTCTTAAC 1350
||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct 1258 TTGGGTTCAGTTGAAGAAATGAGAGAGCAGCTAGTTGACTGGCTGGATTTATCTCTCAAC 1317
Query 1351 CATTCGGTACCATCATCCCTCTTAATTCTTTCTAGGTCATTTTCAATGGCTGGGAAACTC 1410
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 1318 CATTCGGTACCATCATCCCTCTTAATTCTTTCTAGATCATTCTCAATGGCTGGGAAACTC 1377
Query 1411 AAGCCAGAAGAGGCTGTTCAAGCTACTCTCTCCTCTCTGCCAGATGAGGTTGTGGACACT 1470
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1378 AAGCCAGAAGAGGCTGTTCAAGCTACTCTCTCCTCTCTGCCAGATGAGGTTGTGGACACA 1437
Query 1471 GTTGGGGTTACAGCTCTTTCATCAGAAGATTCTGTATCAGAAAGAAAGAGGAAGTTAGAA 1530
||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||
Sbjct 1438 GTTGGGGTTACAGCTCTGTCATCAGAGGATTCTGTATCAGAAAGGAAGAGGAAGTTAGAA 1497
Query 1531 TACCTTGAAATGCaagaagaattaatcaaggaggaggaggaagaagaagaggaggaaatg 1590
||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 1498 TACCTAGAAATGCAAGAAGAATTAATCAAGGAGGAGGAAGAAGAAGAAGAAGAGGAAATG 1557
Query 1591 gcaaagatgaaagagTCTGCTTCAAGCCAAAAAGATGTAGCTTTGGATGAGATGATGGCA 1650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1558 GCAAAGATGAAAGAGTCTGCTTCAAGCCAAAAAGATGTAGCTTTGGATGAGATGATGGCA 1617
Query 1651 TCTACAGCTAAAGATGCTAATGAGCAAGCGAAAGCGAAAACTCTTGAGAAACATGAGCAG 1710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1618 TCTACAGCTAAAGATGCTAATGAGCAAGCGAAAGCGAAAACTCTTGAGAAACATGAGCAG 1677
Query 1711 CTTTGTGAGCTCAGCCGTGCATTGGCTGTTTTGGCTTCCGCATCTTCTGTTAGTATGGAG 1770
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 1678 CTTTGTGAGCTCAGCCGTGCATTAGCTGTTTTGGCTTCCGCATCTTCTGTTAGCATGGAG 1737
Query 1771 CGTGAAGAGTTCCTGAAACTAGTTAAAAAAGAGGTAGATCTATACAACAGCATGGTAGAG 1830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1738 CGTGAAGAGTTCCTGAAACTAGTTAAAAAAGAGGTAGATCTATACAACAGCATGGTAGAG 1797
Query 1831 AAAGGTGGCACAGATGATGAGGAAGAGGCTAGGAAAGCTTATTTAGCTGCTCGAGAAGAT 1890
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1798 AAAGGTGGTACAGATGATGAGGAAGACGCTAGGAAAGCTTATTTAGCTGCTCGAGAAGAT 1857
Query 1891 AGTGACCGAAGTGCTCAGAAAGCTATTGCTGATAAAACTTCTTCTGCACTGTTAGATAGG 1950
||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct 1858 AGTGACCGAAGTGCTCAGAAAGCTATTGCTGATAAAACTTCCTCTGCACTGCTAGATAGG 1917
Query 1951 GTGGAGACAATGCTCCAGAAACTTGAAAAGGAAATTGATGATGTCGATAACAAGATTGGC 2010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1918 GTGGAGACAATGCTCCAGAAACTTGAAAAGGAAATTGATGATGTCGATAACAAGATTGGC 1977
Query 2011 AACCGCTGGCGACTCCTGGACAGAGATTATGATGGAAAGGTAAGTCCAGATGAGGTAGCA 2070
||||||||||||||||||||||||||||||||||| |||||||| |||||||| || |||
Sbjct 1978 AACCGCTGGCGACTCCTGGACAGAGATTATGATGGTAAGGTAAGCCCAGATGAAGTTGCA 2037
Query 2071 TCGGCTGCGATGTACTTGAAGGATACATTGGGCAAAGAGGGTATCCAAGAGCTTATCCAA 2130
| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2038 TTGGCTGCGATGTACCTGAAGGACACATTGGGCAAAGAGGGTATCCAAGAGCTTATCCAA 2097
Query 2131 AACCTTTCTAAAGATAAAGATGGCAAAATACTGGTGGAAGATTTAGTGAAGTTAGCGAGT 2190
|| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2098 AATCTGTCTAAAGATAAAGATGGCAAAATACTGGTGGAAGACTTAGTGAAGTTAGCGAGC 2157
Query 2191 GAGATTGAAGATGCTGAAACTGAAGAGACAGACGAGCCTACTACCAAGTCTTGA 2244
|||||||||||||||||| ||||||| |||||||||||||| ||||||||||||
Sbjct 2158 GAGATTGAAGATGCTGAAGCTGAAGAAACAGACGAGCCTACAACCAAGTCTTGA 2211
Score = 165 bits (89), Expect = 2e-39
Identities = 107/116 (92%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 1 ATGGCTTCAAGAGCGCTTCTTCGAAGGAGAAGTTACGATGTCGTCAAATCTCTAAGTGAA 60
||||||||| |||||||||||||||||||||||||||| || || |||||||||||||||
Sbjct 1 ATGGCTTCACGAGCGCTTCTTCGAAGGAGAAGTTACGACGTAGTGAAATCTCTAAGTGAA 60
Query 61 CATTTGCCTACAATTCAATGTCTTTCAAGTATTGAGCGGCAAGGACAGCGGGGATA 116
||||||||||| |||||||| ||||||||||||||||||||||||| || |||||
Sbjct 61 CATTTGCCTACGGTTCAATGTTTTTCAAGTATTGAGCGGCAAGGACAACGAGGATA 116
> AT3G59820.2 | Symbols: | LETM1-like protein | chr3:22098028-22102164
REVERSE LENGTH=2696
Length=2696
Score = 582 bits (315), Expect = 4e-165
Identities = 1216/1639 (74%), Gaps = 110/1639 (7%)
Strand=Plus/Plus
Query 514 ATAGGTCCTGCTTTGAGAGCTATTGCATCGATGAGCAGGGAAGATTGGGCTAAGAAGCTT 573
||||| |||||| | | |||| |||| || |||| ||||| |||||||| || |||| |
Sbjct 696 ATAGGACCTGCTATAAAAGCTGTTGCCTCCATGAACAGGGCGGATTGGGCAAAAAAGC-T 754
Query 574 C-GTCACTGGAAAGATGAATTTAAATCTAC-TCTCCAACACTACTGGCTGGGGA-CAAAG 630
| |||||||||| |||| ||| ||| || | | |||| || |||||||||| ||||
Sbjct 755 CACTCACTGGAAACATGAGTTTGTATCAACAT-TGAAACATTATTGGCTGGGGACCAAA- 812
Query 631 TTGCTCTGGGCTGATGTC-AGGATCAGTGT-AAGGCTGCTTGTTAAACTT-GCTAATGGA 687
|| |||||||| || | || |||||| | ||| ||| || | || || ||| ||||
Sbjct 813 TTACTCTGGGCAGA-CACTAGAATCAGT-TCAAGATTGC-TGCTCAAGTTGGCTGGTGGA 869
Query 688 AAAGGTCTCTCTAGGAGGGAACGACAACAACTCACTCGAACAACTGCCGACATTTTTAGA 747
||| ||||||| || || ||| | ||||| || |||||||| || || || || ||||||
Sbjct 870 AAAAGTCTCTCCAGAAGAGAAAGGCAACAGCTAACTCGAACGACAGCTGATATCTTTAGA 929
Query 748 TTAGTCCCGGTTGCAGTTTTCATTATTGTTCCATTCATGGAGTTCTTGCTACCGGTATTT 807
||||| || ||||||| ||||| |||| || || |||||||| ||||| || || |||
Sbjct 930 TTAGTGCCATTTGCAGTGTTCATCCTTGTGCCGTTTATGGAGTTTTTGCTCCCAGT-TTT 988
Query 808 CTT-AAGCTGTTCCCAAACATGTTGCCGTCAACTTTCCAGGACAAGATGAAAGAAGAGGA 866
||| ||||| ||||| || ||||| || ||||||||||||||||||||||||||||||||
Sbjct 989 CTTGAAGCTCTTCCCTAATATGTTACCATCAACTTTCCAGGACAAGATGAAAGAAGAGGA 1048
Query 867 GGCTCTAAAAAG-AAGGTTGAAT-GCAAGAATGGAGTATGCTAAGTTTCTCCAAGATACT 924
||| | ||||| || || | | ||||| || || |||||||||||||| || || ||
Sbjct 1049 AGCTTTGAAAAGGAAA-TT-ACTTGCAAGGATAGAATATGCTAAGTTTCTTCAGGAAACC 1106
Query 925 GTTAAAGAAATGGCAAAGGAAGTCCAAACCTCTC--GCAGTGGGGA-GATAAAA-AAGAC 980
| | ||| ||||| |||||||| |||| | || | | ||| || | |||| || ||
Sbjct 1107 GCCAGAGAGATGGCTAAGGAAGTT-AAACAT-TCAAGAACTGGAGAAG-TAAAGCAA-AC 1162
Query 981 TGCAGAAGATCTTGATG-GATT-TATGAACAAGGT-CAGAAGAGG--AGTTGGTGTTTCA 1035
|| ||||| || |||| | || || || |||||| | ||||||| | | || | |
Sbjct 1163 CGCTGAAGACCTGGATGAGTTTCTA-GA-CAAGGTTC-GAAGAGGTCAAATAGTCCAT-A 1218
Query 1036 AATGATGAAATTTTGGGATTTGCAAAGCTCTTCAATGATGAGCTTACATTGGATAACATT 1095
| ||||||| ||||||| ||||||||||| ||||| ||||||||||| ||||||||||||
Sbjct 1219 A-TGATGAACTTTTGGGCTTTGCAAAGCTTTTCAACGATGAGCTTACTTTGGATAACATT 1277
Query 1096 AACAGGTCTCGATTGGTAAATATGTGCAAATACATGGGTATTAGCCCATTTGGAACTGAT 1155
| |||| |||| ||||| | ||||||||||| |||||||||||||||| |||||| |||
Sbjct 1278 AGCAGGCCTCGCTTGGTTAGCATGTGCAAATATATGGGTATTAGCCCATATGGAACAGAT 1337
Query 1156 GCATATTTGCGTTATATGCTTCGGAAAA-GATTACAGGAG-ATTAAA-AAGGATGATAAG 1212
|| ||| |||| |||||||| | ||||| || | ||||| ||||| ||| |||||||
Sbjct 1338 GCTTATCTGCGGTATATGCT-CAGAAAAAGACTG-AGGAGCATTAAGGAAG-ATGATAAA 1394
Query 1213 TTGATCA-AGGCTGAAGGTGTGGAGTCTCTCTCAGAAGCTGAACTT-CGCCAAGCTTGCA 1270
|||| | || |||| |||||||| || || ||||||||||| || ||| ||| |||||
Sbjct 1395 CTGATTAGAG-CTGAGGGTGTGGATTCCCTTTCAGAAGCTGAG-TTACGCGAAGATTGCA 1452
Query 1271 GAGAGA-GAGGAATGCTTCAATTGGGTTCAGTTGAAGAAATGAGAG-AGCAGCTAATTGA 1328
| || | | |||||||| | ||| |||||||||||| ||||| | | ||||| ||
Sbjct 1453 GGGA-ACGGGGAATGCTGGGACTGGTTTCAGTTGAAGAGATGAG-GCAACAGCTTCGCGA 1510
Query 1329 CTGGCTGGATTTATCTCTTAACCATTCGGTACCATCATCCCTCTTAATTCTTTCTAGGTC 1388
||| ||||||| || ||||| ||||| || || || || | || || || |||||| |
Sbjct 1511 TTGGATGGATTTGTCACTTAATCATTCTGTCCCCTCTTCGTTATTGATCCTCTCTAGGGC 1570
Query 1389 ATTTTCAATGGCTGGGAA-ACTCAA-GCCAGAAGAGGCTGTTCAAGCTACTCTCTCCTCT 1446
||| | | ||||| || | | || || ||| || ||||| | ||||||||| || |||
Sbjct 1571 ATTCACGGTTGCTGG-AAGAGTTAAAGC-AGAGGATGCTGTCCGAGCTACTCTTTCTTCT 1628
Query 1447 CTGCCAGATGAGGTTGTGGACACTGTTGGGGTTACAGCTCTTTCATCAGAAGATTCTGTA 1506
|| || || ||||||||||| |||||||| |||| |||| |||| ||||| ||||
Sbjct 1629 CTACCTGACGAGGTTGTGGATACTGTTGGTATTACTTCTCTGCCATCTGAAGACCCTGTT 1688
Query 1507 TCAGAAAGAAAGA-GGAAGTTAGAATACCTTGAAATGCaagaagaattaatcaaggagga 1565
|| || ||| || |||| ||||| |||||||| |||||||||||| | |||||||| ||
Sbjct 1689 TCTGAGCGAA-GACGGAAATTAGAGTACCTTGAGATGCAAGAAGAACTGATCAAGGAAGA 1747
Query 1566 ggaggaagaa-gaagaggaggaaatggcaaagatgaaagagTCTGCTTCAAGCCAAAAA- 1623
|| || ||| ||||| || || | ||| ||| || || | | || ||| |
Sbjct 1748 AGAAGA-GAAAGAAGAAGAAGAGCTTACAAGGATTAAGGA-T--G-TTAAAGGTGGTGAC 1802
Query 1624 GATG-TA-G-CTTTGGATGAGATGATGGCAT-CTA-CAGCTAAAGATGCT-AATGAGCAA 1677
|| | || | | || | ||||||| ||| | | |||| | || || || || ||
Sbjct 1803 GAGGATAAGGCACTGCAAGAGATGAC--CATACCAACAGCCAGCGAAGCACAA-GAACAG 1859
Query 1678 GCGAAAGCGAAAACTCTTGAGA-AACATGA-GCAGCTTTGTGAGCTCAGCCGTGCATTGG 1735
|| | ||| | | |||||| | |||| || | | ||||| | || ||||| || ||||
Sbjct 1860 GCCAGAGCTAGAGTTCTTGA-ACAACAAGATG-ATCTTTGCAAACTTAGCCGCGCCTTGG 1917
Query 1736 -CTGTTTTGGCTTCCGCATCTTCTGT-TAGTATG-GAGCGTGAAGAGTTCCTGAAACTAG 1792
| |||||||||||||| ||||| || | ||| | ||||| ||||| ||||||| | | |
Sbjct 1918 GC-GTTTTGGCTTCCGCTTCTTCGGTGT-GTA-GAGAGCGCGAAGAATTCCTGAGATTGG 1974
Query 1793 TTAAAAAAGAGGTAGA-T-CTATACAACAGCA-TGGT--AGAGA-AAGGTGGCACAGATG 1846
| || |||||||| || | ||||| | || || |||| ||||| ||| || | ||||
Sbjct 1975 TCAAGAAAGAGGTGGAGTTCTATA-A-CA-CAATGGTCGAGAGAGAAGATGT-A--GATG 2028
Query 1847 ATGAGGAAGAGGCTAGGAAAGCTTATTTAGCTGCTCGAGAAGATAGTGACCGAAG-TGCT 1905
||| ||| || | ||| || || ||| ||| ||| ||||| ||||| ||| || |
Sbjct 2029 GTGAAAAAGCTGCAATGAAGGCATACAAAGCAGCTAGAGTAGATATTGACC-AAGCTGAT 2087
Query 1906 CA-GAAAGCT-ATTGCTGATAAAACTTCTTCTGCACTGTTAGATAGGGTGGA-GA-CAAT 1961
| | ||| | || || | ||| |||||||| | || | ||| || | | |
Sbjct 2088 GAAGTT-GCTGAA-GCAGACGAGGTTTCCTCTGCACTAATGGAGAAGGTTGATGGTC--T 2143
Query 1962 GCTCCAGAAACTT-GAAAAGGAAATTGATGATGTCGATAACAAGATTGGCAACCGCTGGC 2020
| | || |||| | || ||||||||||||||||| |||| ||| |||||||| ||||||
Sbjct 2144 GATACA-AAACCTAGAGAAGGAAATTGATGATGTGGATATCAAAATTGGCAAAGGCTGGC 2202
Query 2021 -GACTCCTGGACAGAGATT-ATGATGGAAAGGTAAGTCCAGATGAGGTAGCATCGGCTGC 2078
| || || ||||||||| | |||||||| || | || ||||| || || | |||||
Sbjct 2203 AG-CTTCTTGACAGAGATCGA-GATGGAAAAGTCACACCTGATGAAGTTGCGGCTGCTGC 2260
Query 2079 GATGTACTTGAAGGATACA 2097
|||||| |||| || |||
Sbjct 2261 AATGTACCTGAAAGACACA 2279
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 111344808810
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5