BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475686
Length=2331
Score E
Sequences producing significant alignments: (Bits) Value
AT1G65800.1 | Symbols: ARK2, RK2 | receptor kinase 2 | chr1:244... 1842 0.0
AT1G65790.1 | Symbols: ARK1, RK1 | receptor kinase 1 | chr1:244... 1814 0.0
AT4G21380.1 | Symbols: ARK3, RK3 | receptor kinase 3 | chr4:113... 1206 0.0
AT4G21370.1 | Symbols: PSEUDOSRKA | S-locus protein kinase, put... 697 0.0
> AT1G65800.1 | Symbols: ARK2, RK2 | receptor kinase 2 | chr1:24473121-24476715
FORWARD LENGTH=2781
Length=2781
Score = 1842 bits (997), Expect = 0.0
Identities = 1170/1255 (93%), Gaps = 6/1255 (0%)
Strand=Plus/Plus
Query 1080 GGACAAGAGAATCaaaaatgaaaaaaTGATAGGTTCGAGTATCGGAATGAGCATTTTGCT 1139
||||||||||||||||| | ||||||| |||||||||||||| ||| |||||||||||||
Sbjct 1338 GGACAAGAGAATCAAAAGTAAAAAAATCATAGGTTCGAGTATTGGAGTGAGCATTTTGCT 1397
Query 1140 TCTTATAAGTTTCATCATATTCCATTTTTGGAAAAGGAAGCAGAAACTATCTATAGCAAT 1199
|||| ||||||||||||| |||||||||||||||||||||||||| | ||| ||| ||||
Sbjct 1398 TCTTTTAAGTTTCATCATCTTCCATTTTTGGAAAAGGAAGCAGAAGCGATCAATAACAAT 1457
Query 1200 TCAAACACCTATTGTTGATCAAGTGAGAAGCCAAGATTCTCTAATGAACGAAGTAGTAGT 1259
|||||||||||||||||||| |||||||||||||||||||||||||||||| | |||
Sbjct 1458 TCAAACACCTATTGTTGATCTTGTGAGAAGCCAAGATTCTCTAATGAACGAATTGGTAAA 1517
Query 1260 ATCAAGCAGGAGTTACAAATCCGAAGAAAACAAAACAGAGTACCTAGACCTTCCATTGAT 1319
| ||||||||||||||| |||| ||||||||||||| || || ||||| || ||||||||
Sbjct 1518 AGCAAGCAGGAGTTACACATCCAAAGAAAACAAAACCGATTATCTAGAGCTCCCATTGAT 1577
Query 1320 TGAGTGGGAAGCTCTAGCCATGGCAACAAACAATTTTTCTAAGGACAACATGCTTGGACA 1379
|||||| ||||| ||||||||||||||||||||||||| | |||||| | |||||||||
Sbjct 1578 GGAGTGGAAAGCTTTAGCCATGGCAACAAACAATTTTTCGACGGACAATAAGCTTGGACA 1637
Query 1380 AGGTGGTTTCGGTATTGTTTACAAGGGAATGTTACTTGATGGAAAAGAAATCGCGGTAAA 1439
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1638 AGGTGGTTTTGGTATTGTTTACAAGGGAATGTTACTTGATGGAAAAGAAATCGCGGTAAA 1697
Query 1440 GAGACTATCAAAAATGTCTTCACAAGGGACCGATGAGTTCATGAACGAGGTTCGATTAAT 1499
||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1698 GAGACTATCGAAAATGTCTTCACAAGGGACCGATGAGTTCATGAACGAGGTTAGATTAAT 1757
Query 1500 TGCAAAGCTTCAGCACATAAACCTTGTCCGGCTTCTTGGTTGTTGCGTCGATAAGGGTGA 1559
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1758 TGCAAAGCTTCAGCACATAAACCTTGTCCGGCTTCTAGGTTGTTGCGTCGATAAGGGTGA 1817
Query 1560 GAAGATGTTGATCTACGAGTTCTTGGAGAATCTAAGCCTTGATTCTCATCTCTTTGACAA 1619
||||||||||||||| |||| ||||||||||||||||||||| || |||||||||||| |
Sbjct 1818 GAAGATGTTGATCTATGAGTACTTGGAGAATCTAAGCCTTGACTCGCATCTCTTTGACCA 1877
Query 1620 AACCCGACGCTCTAACTTAAATTGGCAAAAGAGATTTGATATTATCAATGGAATTGCTAG 1679
||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1878 AACACGAAGCTCTAACTTAAATTGGCAAAAGAGATTTGATATTATCAATGGTATTGCTAG 1937
Query 1680 AGGACTTCTATATCTTCACCAAGATTCACGGTGTAGGATTATCCATAGAGACTTGAAAGC 1739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1938 AGGACTTCTATATCTTCACCAAGATTCACGGTGTAGGATTATCCATAGAGACTTGAAAGC 1997
Query 1740 AAGTAATGTATTGCTTGATAAAAATATGACTCCGAAGATCTCGGATTTTGGGATGGCTAG 1799
|||||| |||||||||||||||||||||||||| |||||||| |||||||||||||| ||
Sbjct 1998 AAGTAACGTATTGCTTGATAAAAATATGACTCCAAAGATCTCCGATTTTGGGATGGCGAG 2057
Query 1800 GATCTTTGGACGGGAGGAGACAGAAGCTAATACAAGGAGGGTGGTTGGAACTTACGGCTA 1859
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 2058 GATCTTTGGACGGGAGGAGACAGAGGCTAATACAAGGAGGGTGGTCGGAACTTACGGCTA 2117
Query 1860 CATGTCTCCAGAATATGCAATGGACGGGATATACTCGATGAAGTCGGATGTTTTCAGCTT 1919
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2118 CATGTCTCCAGAATATGCAATGGACGGGATATTCTCGATGAAGTCGGATGTTTTCAGCTT 2177
Query 1920 TGGGGTCTTGCTTCTGGAGATTATAAGTGGCAAAAGAAATAAAGGATTTTACAACTCAAA 1979
||||||||||||||| |||||||||||||| |||||||| |||||||| |||||||||||
Sbjct 2178 TGGGGTCTTGCTTCTAGAGATTATAAGTGGAAAAAGAAACAAAGGATTCTACAACTCAAA 2237
Query 1980 CCGTGATCTTAATCTCCTCGGTTTTGTGTGGAGGCATTGGAAGGAAGGAAAAGGGCTAGA 2039
|||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct 2238 CCGTGATCTTAATCTCCTTGGTTTTGTGTGGAGGCATTGGAAGGAAGGAAAAGAGCTAGA 2297
Query 2040 GATTGTAGATCCGATCAACATAGATTCTTCGTCATCA-ACGTTCCGGACACATGAAATCT 2098
||||||||||||||||||||| ||| ||| ||||||| | |||| ||||||||||||||
Sbjct 2298 GATTGTAGATCCGATCAACATCGATGCTTTGTCATCAGAA-TTCCCGACACATGAAATCT 2356
Query 2099 TAAGGTGTATACAAATTGGTCTCTTGTGTGTTCAAGAACGTGCCGAAGACAGGCCAGTGA 2158
|||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct 2357 TAAGATGTATACAAATTGGTCTCTTGTGTGTTCAAGAACGAGCCGAAGACAGACCAGTGA 2416
Query 2159 TGTCCTCGGTAATGGTGCTGCTTGGAAGCGAAACCACGGCTATAACTCAGCCTAAACGTC 2218
||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||
Sbjct 2417 TGTCCTCGGTAATGGTGATGCTTGGAAGCGAAACTACGGCTATTCCTCAGCCTAAACGTC 2476
Query 2219 CTGGTTTTTGTATTGGGAGAAGTCCTCTTGAGGCTGATTCTTCGTCAAGTACACAAC-AT 2277
|||||||||| | ||||||||| ||||||||| ||||||||||||||||||||| | |
Sbjct 2477 CTGGTTTTTGCGTGGGGAGAAGTTCTCTTGAGGTTGATTCTTCGTCAAGTACACAGCGA- 2535
Query 2278 GGCGATGAATGTACAGTGAATCAAATCAC-CGTCTCAGTCATTGACGCTCGGTAA 2331
| |||||||||||||||||| ||| |||| | |||| ||||||||||||||||||
Sbjct 2536 GACGATGAATGTACAGTGAACCAAGTCACTC-TCTCGGTCATTGACGCTCGGTAA 2589
Score = 691 bits (374), Expect = 0.0
Identities = 515/579 (89%), Gaps = 25/579 (4%)
Strand=Plus/Plus
Query 1 ATGAGAAGTGTACAAAACTACCACCATCCTTACTTCATATTCTTCATCTTAATTCTGTTT 60
||||||| ||||| |||||| || ||| ||||||||||||| |||||| |||||||||||
Sbjct 46 ATGAGAAATGTACCAAACTATCATCATTCTTACTTCATATTATTCATCATAATTCTGTTT 105
Query 61 CTTGCTTTCTCTGTTTCTGCAAAC-ACTTTTTCAGCCACAGAATCTCTCACTATCTCAAG 119
|||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||
Sbjct 106 CTTGCTTTCTCTGTTTATGCAAGCAAC-TTTTCAGCCACAGAATCTCTCACTATCTCAAG 164
Query 120 CAACAAAACCATTATATCTCCTAGTCAAATCTTCGAGCTCGGTTTCTTCAATCCCG-CAT 178
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 165 CAACAAAACCATTATATCTCCTAGTCAAATCTTCGAGCTCGGTTTCTTCAATCCCGAC-T 223
Query 179 CAAGTTCGCGTTGGTATCTCGGGATTTGGTACAAGATAATCCCTATACGAACCTACGTAT 238
||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||||||
Sbjct 224 CAAGTTCACGTTGGTATCTCGGCATATGGTACAAGATAATCCCTATAAGAACCTACGTAT 283
Query 239 GGGTTGCGAACAGAGACAATCCTCTCTCTAACTCCAACGGAACTCTCAAAATATCCGAAA 298
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 284 GGGTTGCAAACAGAGACAATCCTCTCTCTAGTTCCAACGGAACTCTCAAAATATCCGACA 343
Query 299 ATAACCTAGTCATTTTCGATCAATCCGATAGAACTGTTTGGTCGACGAATATAACCGGAG 358
||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 344 ATAACCTCGTCATTTTCGATCAGTCCGATAGGCCTGTTTGGTCGACGAATATAACCGGAG 403
Query 359 GAGATGTGAGATCACCAGTGG-TGGCAGAGCTTCTTGATAACGGTAATTTC-TTGCTCAG 416
||||||||||||||||||||| || |||||||||||||| |||||||||| || || ||
Sbjct 404 GAGATGTGAGATCACCAGTGGCTG-CAGAGCTTCTTGATTACGGTAATTTTGTT-CTTAG 461
Query 417 AGACTCCAACAATAG-A--C----T---TTTATG-G-CAGAGTTTCGATTTTCCAACAGA 464
||||||||| |||| | | | ||| || | |||||||||||||| || |||||
Sbjct 462 AGACTCCAAAAATAATAAACCAAGTGGATTTTTGTGGCAGAGTTTCGATTTCCCGACAGA 521
Query 465 TACTTTACT-TCAGGAGATGAAATTGGGATGGGATCACAAAAACGGA---TTCAATAGAA 520
||||||||| || ||| |||||| ||||||||||| |||||| |||| ||||| ||||
Sbjct 522 TACTTTACTATC-GGATATGAAAATGGGATGGGATAACAAAAGCGGAGGATTCAACAGAA 580
Query 521 TCTTGAGATCTTGGAAAAATACGGAAGATCCATCAAGCG 559
|||||||||||||||||| || || ||||| |||||||
Sbjct 581 TCTTGAGATCTTGGAAAACCACAGATGATCCGTCAAGCG 619
Score = 505 bits (273), Expect = 9e-142
Identities = 445/525 (85%), Gaps = 23/525 (4%)
Strand=Plus/Plus
Query 559 GAGTCGAT-ACGGTACCGGAGCGGTCCGTGGAACGG-AATAGGGTTTAGCAGCGTAGCAG 616
||||| || || |||| |||||||||| ||| ||| ||| |||||||||||||| | |
Sbjct 679 GAGTCCATAAC-GTACAGGAGCGGTCCATGGCTCGGAAAT-CGGTTTAGCAGCGTACCGG 736
Query 617 GGACG-AACCAAGTTGGTTACATAGTTTACAATTTCACAGCA-AGTAAGGAGGAAG-TGA 673
||| | |||| ||||| |||||||| ||| |||||||| | | ||| | ||| ||
Sbjct 737 GGATGAAACC-AGTTGATTACATAGACAACAGTTTCACAG-AGAATAATCAACAAGTTG- 793
Query 674 CTTACTCATACCGAATCAACAAACCCAACATTTACTCGATATTAAACCTAAACTCCGCGG 733
||||||||||||| |||||||| ||||||||||||||||||||| ||||| |||| |||
Sbjct 794 TTTACTCATACCGAGTCAACAAAACCAACATTTACTCGATATTAAGCCTAAGCTCCACGG 853
Query 734 GATTTTTACAACGATTGACTTGGATGGAGGCAGCACAGAGTTGGAAACAATTATGGTACA 793
|| | ||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 854 GACTATTACAACGATTAACTTGGATGGAGGCAGCACAGAGTTGGAAACAGTTATGGTACT 913
Query 794 CACCAAAGGACCTATGCGATAACTACAAAGTGTGTGGGAATTACGGTTATTGCGATTCGA 853
|||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||
Sbjct 914 CACCAAAGGACCTATGTGATAACTACAAAGAGTGTGGGAATTACGGTTATTGCGATGCGA 973
Query 854 ACACTAT-ACGGAATTGTAATTGTATCAAAGGGTTTAAGCCAATGAACGAGCAAGAGTGG 912
||||| | || | |||||||||||||||||||||| |||||||||| ||||||| | |
Sbjct 974 ACACT-TCACCTATTTGTAATTGTATCAAAGGGTTTGAGCCAATGAATGAGCAAGCG-G- 1030
Query 913 GACTT-GAGAGATGGTTCCGCTGGTTGCATGAGGAAGAC-AAGGCTGAGCTGTGATGGTA 970
||| |||||||| ||| | ||||||| |||||||||| ||| || |||||||| ||||
Sbjct 1031 --CTTTGAGAGATGATTCTGTTGGTTGCGTGAGGAAGACGAAG-CTAAGCTGTGACGGTA 1087
Query 971 GAGATGGGTTTGCGCGGTTAAAGA-GAATGAAATTGCCGGATACTACAGCCACAATTGTG 1029
|||||||||||| |||||| |||| || ||| | |||| |||||||||| |||| ||||
Sbjct 1088 GAGATGGGTTTGTGCGGTTGAAGAAGA-TGAGACTGCCAGATACTACAGAGACAAGTGTG 1146
Query 1030 GACAGAG-ACATTGGGTTGAAAGTATGTAAAGAGAGGTGTCTAAA 1073
|||| || | ||||||||||||| |||| |||||||||| |||||
Sbjct 1147 GACAAAGGA-ATTGGGTTGAAAGAATGTGAAGAGAGGTGCCTAAA 1190
> AT1G65790.1 | Symbols: ARK1, RK1 | receptor kinase 1 | chr1:24468932-24472329
FORWARD LENGTH=2532
Length=2532
Score = 1814 bits (982), Expect = 0.0
Identities = 1165/1255 (93%), Gaps = 6/1255 (0%)
Strand=Plus/Plus
Query 1080 GGACAAGAGAATCaaaaatgaaaaaaTGATAGGTTCGAGTATCGGAATGAGCATTTTGCT 1139
||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||
Sbjct 1281 GGACAAGAGAATCAAAAATGAAAAAATTATAGGTTCGAGTATTGGAGTGAGCATTTTGCT 1340
Query 1140 TCTTATAAGTTTCATCATATTCCATTTTTGGAAAAGGAAGCAGAAACTATCTATAGCAAT 1199
|||| ||||||| |||| |||||||||||||||||||||||||| | ||| ||| ||||
Sbjct 1341 TCTTTTAAGTTTTGTCATCTTCCATTTTTGGAAAAGGAAGCAGAAGCGATCAATAACAAT 1400
Query 1200 TCAAACACCTATTGTTGATCAAGTGAGAAGCCAAGATTCTCTAATGAACGAAGTAGTAGT 1259
||||||||||| |||||||||||||||||||||||| || ||||| ||||| || |||||
Sbjct 1401 TCAAACACCTAATGTTGATCAAGTGAGAAGCCAAGACTCGCTAATCAACGATGTGGTAGT 1460
Query 1260 ATCAAGCAGGAGTTACAAATCCGAAGAAAACAAAACAGAGTACCTAGACCTTCCATTGAT 1319
||| || ||| |||||| |||| ||||||| |||| ||||||||||| ||||||||| |
Sbjct 1461 ATCTAGGAGGGGTTACACATCCAAAGAAAAAAAAAGTGAGTACCTAGAGCTTCCATTG-T 1519
Query 1320 T-GAGTGGGAAGCTCTAGCCATGGCAACAAACAATTTTTCTAAGGACAACATGCTTGGAC 1378
| |||| ||||||||| |||| ||||||||||||||||||||| ||||||| ||||||||
Sbjct 1520 TGGAGTTGGAAGCTCTTGCCACGGCAACAAACAATTTTTCTAACGACAACAAGCTTGGAC 1579
Query 1379 AAGGTGGTTTCGGTATTGTTTACAAGGGAATG-TTACTTGATGGAAAAGAAATCGCGGTA 1437
||||||| ||||| |||||||||||||||| | |||||||| ||||||||||| ||||||
Sbjct 1580 AAGGTGGATTCGGAATTGTTTACAAGGGAA-GATTACTTGACGGAAAAGAAATTGCGGTA 1638
Query 1438 AAGAGACTATCAAAAATGTCTTCACAAGGGACCGATGAGTTCATGAACGAGGTTCGATTA 1497
||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct 1639 AAGAGACTATCGAAAATGTCCTCACAAGGGACCGATGAGTTCATGAACGAGGTTAGATTA 1698
Query 1498 ATTGCAAAGCTTCAGCACATAAACCTTGTCCGGCTTCTTGGTTGTTGCGTCGATAAGGGT 1557
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1699 ATTGCAAAGCTTCAGCACATAAACCTTGTCCGGCTTCTAGGTTGTTGCGTCGATAAGGGT 1758
Query 1558 GAGAAGATGTTGATCTACGAGTTCTTGGAGAATCTAAGCCTTGATTCTCATCTCTTTGAC 1617
||||||||||||||||| |||| |||||||||| |||||||||| || ||||||||||||
Sbjct 1759 GAGAAGATGTTGATCTATGAGTACTTGGAGAATTTAAGCCTTGACTCGCATCTCTTTGAC 1818
Query 1618 AAAACCCGACGCTCTAACTTAAATTGGCAAAAGAGATTTGATATTATCAATGGAATTGCT 1677
|||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1819 CAAACACGAAGCTCTAACTTAAATTGGCAAAAGAGATTTGATATTATCAATGGTATTGCT 1878
Query 1678 AGAGGACTTCTATATCTTCACCAAGATTCACGGTGTAGGATTATCCATAGAGACTTGAAA 1737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1879 AGAGGACTTCTATATCTTCACCAAGATTCACGGTGTAGGATTATCCATAGAGACTTGAAA 1938
Query 1738 GCAAGTAATGTATTGCTTGATAAAAATATGACTCCGAAGATCTCGGATTTTGGGATGGCT 1797
|||||||| |||||||||||||||||||||||||| |||||||||||||| || |||||
Sbjct 1939 GCAAGTAACGTATTGCTTGATAAAAATATGACTCCAAAGATCTCGGATTTCGGTATGGCG 1998
Query 1798 AGGATCTTTGGACGGGAGGAGACAGAAGCTAATACAAGGAGGGTGGTTGGAACTTACGGC 1857
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct 1999 AGGATCTTTGGACGGGAGGAGACAGAGGCTAATACAAGGAGGGTGGTCGGAACTTACGGC 2058
Query 1858 TACATGTCTCCAGAATATGCAATGGACGGGATATACTCGATGAAGTCGGATGTTTTCAGC 1917
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2059 TACATGTCTCCAGAATATGCAATGGACGGGATATTCTCGATGAAGTCGGATGTTTTCAGC 2118
Query 1918 TTTGGGGTCTTGCTTCTGGAGATTATAAGTGGCAAAAGAAATAAAGGATTTTACAACTCA 1977
||||||||||||||||| |||||||||||||| |||||||| |||||||| |||||||||
Sbjct 2119 TTTGGGGTCTTGCTTCTAGAGATTATAAGTGGAAAAAGAAACAAAGGATTCTACAACTCA 2178
Query 1978 AACCGTGATCTTAATCTCCTCGGTTTTGTGTGGAGGCATTGGAAGGAAGGAAAAGGGCTA 2037
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 2179 AACCGTGATCTTAATCTCCTCGGTTTTGTGTGGAGGCATTGGAAGGAAGGAAACGAGCTA 2238
Query 2038 GAGATTGTAGATCCGATCAACATAGATTCTTCGTCATCAACGTTCCGGACACATGAAATC 2097
||||||||||||||||||||||| ||||||| |||||||| ||||| |||||||||||||
Sbjct 2239 GAGATTGTAGATCCGATCAACATCGATTCTTTGTCATCAAAGTTCCCGACACATGAAATC 2298
Query 2098 TTAAGGTGTATACAAATTGGTCTCTTGTGTGTTCAAGAACGTGCCGAAGACAGGCCAGTG 2157
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 2299 TTAAGATGTATACAAATTGGTCTCTTGTGTGTTCAAGAACGAGCCGAAGACAGACCAGTG 2358
Query 2158 ATGTCCTCGGTAATGGTGCTGCTTGGAAGCGAAACCACGGCTATAACTCAGCCTAAACGT 2217
|||||||||||||||||| |||||||||||||||| || ||||| ||||||||||||||
Sbjct 2359 ATGTCCTCGGTAATGGTGATGCTTGGAAGCGAAACTACCGCTATTCCTCAGCCTAAACGT 2418
Query 2218 CCTGGTTTTTGTATTGGGAGAAGTCCTCTTGAGGCTGATTCTTCGTCAAGTACACAACAT 2277
||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||| |
Sbjct 2419 CCTGGATTTTGCATTGGTAGAAGTCCTCTTGAGGCTGATTCTTCTTCAAGTACACAGCGC 2478
Query 2278 GGCGATGAATGTACAGTGAATCAAATCAC-CGTCTCAGTCATTGACGCTCGGTAA 2331
| |||||||||||||||||| |||||||| | |||| ||||||||||||||||||
Sbjct 2479 GACGATGAATGTACAGTGAACCAAATCACTC-TCTCGGTCATTGACGCTCGGTAA 2532
Score = 833 bits (451), Expect = 0.0
Identities = 526/562 (94%), Gaps = 6/562 (1%)
Strand=Plus/Plus
Query 1 ATGAGAAGTGTACAAAACTACCACCATCCTTACTTCATATTCTTCATCTTAATTCTGTTT 60
||||||||||||| ||||||||||||| ||| |||||| ||| |||| ||||||||||||
Sbjct 1 ATGAGAAGTGTACCAAACTACCACCATTCTTTCTTCATTTTCCTCATTTTAATTCTGTTT 60
Query 61 CTTGCTTTCTCTGTTTCTGCAAACACTTTTTCAGCCACAGAATCTCTCACTATCTCAAGC 120
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 61 CTTGCTTTCTCTGTTTCTCCAAACACTCTTTCAGCCACAGAATCTCTCACTATCTCAAGC 120
Query 121 AACAAAACCATTATATCTCCTAGTCAAATCTTCGAGCTCGGTTTCTTCAATCCCGCATCA 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 AACAAAACCATTATATCTCCTAGTCAAATCTTCGAGCTCGGTTTCTTCAATCCCGCATCA 180
Query 181 AGTTCGCGTTGGTATCTCGGGATTTGGTACAAGATAATCCCTATACGAACCTACGTATGG 240
|||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||
Sbjct 181 AGTTCGCGTTGGTATCTCGGCATATGGTACAAGATAATCCCTATAAGAACCTACGTATGG 240
Query 241 GTTGCGAACAGAGACAATCCTCTCTCTAACTCCAACGGAACTCTCAAAATATCCGAAAAT 300
||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 241 GTTGCAAACAGAGACAATCCTCTCTCTAGCTCCAACGGAACTCTCAAAATATCCGGCAAT 300
Query 301 AACCTAGTCATTTTCGATCAATCCGATAGAACTGTTTGGTCGACGAATATAACCGGAGGA 360
||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 301 AACCTCGTCATTTTCGATCAGTCCGATAGGCCTGTTTGGTCGACGAATATAACCGGAGGA 360
Query 361 GATGTGAGATCACCAGTGG-TGGCAGAGCTTCTTGATAACGGTAATTTCTTGCTCAGAGA 419
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 361 GATGTGAGATCACCAGTGGCTG-CAGAGCTTCTTGATAACGGTAATTTCTTGCTCAGAGA 419
Query 420 CTCCAACAATAGACTTTTATGGCAGAGTTTCGATTTTCCAACAGATACTTTACTT-CAGG 478
|||||| || |||||| |||||||||||||||||||||| ||||||||||||||| | ||
Sbjct 420 CTCCAATAACAGACTTCTATGGCAGAGTTTCGATTTTCCGACAGATACTTTACTTGC-GG 478
Query 479 AGATGAAATTGGGATGGGATCACAAAAACGGATTCAATAGAATCTTGAGATCTTGGAAAA 538
|||||||||||||||||||||| |||| ||||||||| || ||||||||||| |||||||
Sbjct 479 AGATGAAATTGGGATGGGATCAGAAAACCGGATTCAACAGGATCTTGAGATCCTGGAAAA 538
Query 539 -ATACGGAAGATCCATCAAGCG 559
| || || |||||||||||||
Sbjct 539 CA-ACAGATGATCCATCAAGCG 559
Score = 643 bits (348), Expect = 0.0
Identities = 471/530 (89%), Gaps = 9/530 (2%)
Strand=Plus/Plus
Query 554 CAAGCGAGTCGATACGGTACCGGAGCGGTCCGTGGAACGGAATAG-GGTTTAGCAGCGTA 612
|||| |||||||||| ||||| |||||||| ||||| ||||| | | ||||||||||||
Sbjct 615 CAAG-GAGTCGATACTATACCGCAGCGGTCCATGGAATGGAAT-GCGTTTTAGCAGCGTA 672
Query 613 GCAGGGACGAA-CCAAGTTGGTTACATAGTTTACAATTTCACAGCAAGTAAGGAGGAAGT 671
||||||| || ||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct 673 CCAGGGAC-AATTCAAGTTGATTACATGGTTTACAATTTCACAGCAAGTAAGGAGGAAGT 731
Query 672 GACTTACTCATACCGAATCAACAAACCCAACATT-TACTCGATATTAAACCTAAACTCCG 730
||||||||||||||||||||||||| | ||| || ||||||| |||| || ||||||| |
Sbjct 732 GACTTACTCATACCGAATCAACAAAACAAAC-TTATACTCGAGATTATACTTAAACTCTG 790
Query 731 CGGGATTT-TTACAACGATTGACTTGGATGGAGGCAGCACAGAGTTGGAAACAATTATGG 789
|||| ||| |||||||||||||||||| | ||| || ||||||||||||| ||| |||||
Sbjct 791 CGGG-TTTATTACAACGATTGACTTGGTTTGAGACAACACAGAGTTGGAAGCAACTATGG 849
Query 790 TACACACCAAAGGACCTATGCGATAACTACAAAGTGTGTGGGAATTACGGTTATTGCGAT 849
||| |||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct 850 TACTCACCGAAGGACCTATGCGATAACTACAAAGTGTGCGGGAATTTCGGTTATTGCGAC 909
Query 850 TCGAACACTATACGGAATTGTAATTGTATCAAAGGGTTTAAGCCAATGAACGAGCAAGAG 909
||||||| | ||| |||||| ||||||||||||||||||||||| |||| ||||||| |
Sbjct 910 TCGAACAGTTTACCAAATTGTTATTGTATCAAAGGGTTTAAGCCAGTGAATGAGCAAGCG 969
Query 910 TGGGACTTGAGAGATGGTTCCGCTGGTTGCATGAGGAAGACAAGGCTGAGCTGTGATGGT 969
||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||
Sbjct 970 TGGGACTTGAGAGATGGCTCCGCTGGTTGCATGAGGAAGACGAGGCTGAGCTGTGACGGT 1029
Query 970 AGAGATGGGTTTGCGCGGTTAAAGAGAATGAAATTGCCGGATACTACAGCCACAATTGTG 1029
|||||||| ||| | ||||| ||||| ||||||||||| ||||| || || |||||||||
Sbjct 1030 AGAGATGGTTTTACCCGGTTGAAGAGGATGAAATTGCCAGATACCACGGCGACAATTGTG 1089
Query 1030 GACAGAGACATTGGGTTGAAAGTATGTAAAGAGAGGTGTCTAAAAGATTG 1079
|||||||| ||||||||||||||||||||||| ||||||||| |||||||
Sbjct 1090 GACAGAGAAATTGGGTTGAAAGTATGTAAAGAAAGGTGTCTAGAAGATTG 1139
> AT4G21380.1 | Symbols: ARK3, RK3 | receptor kinase 3 | chr4:11388925-11393226
REVERSE LENGTH=2983
Length=2983
Score = 1206 bits (653), Expect = 0.0
Identities = 1074/1274 (84%), Gaps = 41/1274 (3%)
Strand=Plus/Plus
Query 1080 GGACAAGAGAATCaaaaatgaaaaaaTGATAGGTTCGAGTATCGGAATGAGCATTTTGCT 1139
|||||| |||| || || || |||||| |||||||||||||| ||| ||||| |||||||
Sbjct 1435 GGACAAAAGAAACAGAAGTGCAAAAATCATAGGTTCGAGTATTGGAGTGAGCGTTTTGCT 1494
Query 1140 TCTTATAAGTTTCATCATATTCCATT-TT-TGGAAAAGGAAGCAGAAACTATCTATAGC- 1196
|||| |||||||||| || || | || || ||||||||||||||||| | ||| ||| |
Sbjct 1495 TCTTTTAAGTTTCATTATCTT-C-TTCTTGTGGAAAAGGAAGCAGAAGCGATCAATA-CT 1551
Query 1197 AATTC-AAACACCTATTGTTG---ATCAAGTGAGAAGCCAAGATTCT-CTAATGAACGAA 1251
|| || ||||||||||||||| ||||| ||||||||| ||||| | ||||||||||||
Sbjct 1552 AA-TCGAAACACCTATTGTTGATCATCAACTGAGAAGCCGAGATT-TGCTAATGAACGAA 1609
Query 1252 GTAGTAGTATCAAGCAGGAGTTACAAATCCGA-AGAAAACAAAACAGA-GTACCTAGACC 1309
|| ||| ||||||| ||||| ||| || | | ||||||||| ||||| | | || ||
Sbjct 1610 GTTGTAATATCAAGTAGGAGACACATAT-CTAGAGAAAACAATACAGACG-ATCTCGA-A 1666
Query 1310 TT-CCATTGATTGAGTGGGAAGCTCTAGCCATGGCAACAAACAATTTTTCTAAGGACAAC 1368
|| |||||||| |||| |||| | |||||||| ||||||||||||||||| | ||||
Sbjct 1667 TTGCCATTGATGGAGTTTGAAGAAGTTGCCATGGCCACAAACAATTTTTCTAACGCCAAC 1726
Query 1369 ATGCTTGGACAAGGTGGTTTCGGTATTGTTTACAAGGGAATGTTACTTGATGGAAAAGAA 1428
| ||| |||||||||||||| ||||| ||||| ||||||| |||||||||||| |||||
Sbjct 1727 AAGCTAGGACAAGGTGGTTTTGGTATAGTTTATAAGGGAAAGTTACTTGATGGTCAAGAA 1786
Query 1429 ATCGCGGTAAAGAGACTATCAAA-A-ATGTCTTCACAAGGGACCGATGAGTTCATGAACG 1486
|| || || |||||||||||||| | || || || ||||| |||||||||| ||| |
Sbjct 1787 ATGGCAGTGAAGAGACTATCAAAGACATCAGTT--CAGGGGACTGATGAGTTCAAGAATG 1844
Query 1487 AGGTTCGA-TTAATTGCAAAGCTTCAGCACATAAACCTTGTCCGGCTTCTTGGTTGTTGC 1545
||| | | || ||||||| ||||||||||||||||||||| ||||||||| ||||||
Sbjct 1845 AGG-TAAAGTTGATTGCAAGGCTTCAGCACATAAACCTTGTTAGGCTTCTTGCATGTTGC 1903
Query 1546 GTCGATAAGGGTGAGAAGATGTTGATCTACGAGTTCTTGGAGAATCTAAGCCTTGATTCT 1605
|||||| |||||||||||||||||| ||||||| |||||| ||||||||||| || |||
Sbjct 1904 GTCGATGCGGGTGAGAAGATGTTGATTTACGAGTACTTGGAAAATCTAAGCCTCGACTCT 1963
Query 1606 CATCTCTTTGACAAAACCCGACGCTCTAA-CTTAAATTGGCAAAAGAGATTTGATATTAT 1664
||||| ||||||||| ||||| |||||| | |||||||||||| |||||||||||| ||
Sbjct 1964 CATCTATTTGACAAATCCCGAAACTCTAAGC-TAAATTGGCAAATGAGATTTGATATCAT 2022
Query 1665 CAATGGAATTGCTAGAGGACTTCTATATCTTCACCAAGATTCACGGTGTAGGATTATCCA 1724
|||||| |||||| ||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct 2023 CAATGGTATTGCTCGAGGACTTCTATATCTTCACCAAGATTCACGGTTTAGAATTATCCA 2082
Query 1725 TAGAGACTTGAAAGCAAGTAATGTATTGCTTGATAAAAATATGACTCCGAAGATCTCGGA 1784
||||||||||||||||||||| | |||||||||||| |||||||||| |||||||||||
Sbjct 2083 TAGAGACTTGAAAGCAAGTAACATCTTGCTTGATAAATATATGACTCCAAAGATCTCGGA 2142
Query 1785 TTTTGGGATGGCTAGGATCTTTGGACGGGAGGAGACAGAAGCTAATACAAGGAGGGTGGT 1844
||| || ||||||||||||||||||||||| ||||||||||||||||| |||| ||||||
Sbjct 2143 TTTCGGAATGGCTAGGATCTTTGGACGGGATGAGACAGAAGCTAATACGAGGAAGGTGGT 2202
Query 1845 TGGAACTTACGGCTACATGTCTCCAGAATATGCAATGGACGGGATATACTCGATGAAGTC 1904
|||||| ||||| || |||||||| |||||||||||||||||||||| ||||||||||||
Sbjct 2203 TGGAACCTACGGTTATATGTCTCCTGAATATGCAATGGACGGGATATTCTCGATGAAGTC 2262
Query 1905 GGATGTTTTCAGCTTTGGGGTCTTGCTTCTGGAGATTATAAGTGGCAAAAGAAATAAAGG 1964
||||||||||| ||||||||||||||||| |||||||||||| |||| || || |||||
Sbjct 2263 AGATGTTTTCAGTTTTGGGGTCTTGCTTCTTGAGATTATAAGTAGCAAGAGGAACAAAGG 2322
Query 1965 ATTTTACAACTCAAACCGTGATCTTAATCTCCTCGGTTTTGTGTGGAGGCATTGGAAGGA 2024
||| ||||| || ||||||| ||||| || ||||||| |||||||||| ||||||| ||
Sbjct 2323 ATTCTACAATTCGGACCGTGACCTTAACCTTCTCGGTTGTGTGTGGAGGAATTGGAAAGA 2382
Query 2025 AGGAAAAGGGCTAGAGATTGTAGATCCGATCAACATAGATTCTTCGTCATCAACGTTCCG 2084
|||||||||||||||||| ||||||| |||| || ||||||||| |||||| ||| |
Sbjct 2383 AGGAAAAGGGCTAGAGATCATAGATCCAATCATCACAGATTCTTC---ATCAACATTCAG 2439
Query 2085 GACA-CATGAAATCTTAAGGTGTATACAAATTGGTCTCTTGTGTGTTCAAGAACGTGCCG 2143
| || |||||||||||||| || ||||||||||| ||||||||||||||||||||||| |
Sbjct 2440 G-CAACATGAAATCTTAAGATGCATACAAATTGGCCTCTTGTGTGTTCAAGAACGTGCAG 2498
Query 2144 AAGACAGGCCAG-TGATGTCCTCGGTAATGGTGCTGCTTGGAAGCGAAACCACGGCTATA 2202
| ||||| ||| | ||||||| |||||| || |||| ||||||||| | || ||||
Sbjct 2499 AGGACAGACCAACT-ATGTCCTTGGTAATTTTGATGCTCGGAAGCGAATCAACAACTATT 2557
Query 2203 ACTCAGCCTAAA-CGTCCTGGTTTTTGTATTGG-GAGAAGTCCTCTTGAGGCTGATTCTT 2260
|||| |||||| || || |||| ||| | || |||||||| |||||| |||||||||
Sbjct 2558 CCTCAACCTAAAGCGCCC-GGTTATTGCCT-GGAGAGAAGTCTTCTTGACACTGATTCTT 2615
Query 2261 CGTCAAGTACACAACATGGCGATGAATG-T--ACAGTGAATCAAATCACCGTCTCAGTCA 2317
|||| |||| ||| | | |||||||| | |||||||| ||||| || ||||| |||
Sbjct 2616 CGTCGAGTAAACAGCGCGACGATGAATCATGGACAGTGAACCAAATTACTGTCTCGGTCC 2675
Query 2318 TTGACGCTCGGTAA 2331
|||| |||||||||
Sbjct 2676 TTGATGCTCGGTAA 2689
> AT4G21370.1 | Symbols: PSEUDOSRKA | S-locus protein kinase, putative
| chr4:11383884-11387136 REVERSE LENGTH=2559
Length=2559
Score = 697 bits (377), Expect = 0.0
Identities = 759/939 (81%), Gaps = 44/939 (5%)
Strand=Plus/Plus
Query 1365 CAACATGCTTGGACAAGGTGGTTTCGGTATTGTTTACAAGGGAATGTTACTTGA-TGG-A 1422
|||||| ||||||| |||||||||||||||||| |||||||||| ||||||||| || |
Sbjct 1581 CAACATACTTGGACGAGGTGGTTTCGGTATTGTATACAAGGGAAGGTTACTTGACGGGTA 1640
Query 1423 AAAGAAATCGCGGT-AAAGAGACTATCAAAAATGTCTTCACAAGGGACCGATGAGTTCAT 1481
|||| || || || ||| ||| ||||| | ||||| || ||||| ||| |||||||||
Sbjct 1641 AAAG--ATTGCAGTGAAA-AGATTATCAGAGATGTCATCTCAAGGAACCAATGAGTTCAA 1697
Query 1482 GAACGAGGTTCGATTAATTGCAAAGCTTCAGCACATAAACCTTGTCCGGCTTCTTGGTTG 1541
||||||||| | |||| |||| |||||| ||||| |||||||||||||||||| ||||
Sbjct 1698 GAACGAGGTGAGGCTAATCGCAAGGCTTCAACACATCAACCTTGTCCGGCTTCTTAGTTG 1757
Query 1542 TTGCGTCGATAAG-GG-TGAGAAGATGTTGATCTACGAGTTCTTGGAGAATCTAAGCCTT 1599
|||| || || | || ||||||||| ||||| || || | |||||||||| |||||||
Sbjct 1758 TTGCATC--TACGCGGATGAGAAGATATTGATTTATGAATACTTGGAGAATGGAAGCCTT 1815
Query 1600 GATTCTCATCTCTTTGACAA-AACCCGACGCTC---TAA-CTTAAATTGGCAAAAGAGAT 1654
|||||||||||||| || || ||||| | |||| ||| | |||| ||||||| |||||
Sbjct 1816 GATTCTCATCTCTTCGA-AACAACCCAAAGCTCTAATAAGC-TAAACTGGCAAACGAGAT 1873
Query 1655 TTGA-TATTATCAATGGAATTGCTAGAGGACTTCTATATCTTCACCAAGATTCACGGTGT 1713
|| | ||||||||||| |||||| |||||||| |||| ||||||||||||||| ||| |
Sbjct 1874 TT-AGCATTATCAATGGTATTGCTCGAGGACTTTTATACCTTCACCAAGATTCAAGGTTT 1932
Query 1714 AGGATTATCCATAGAGACT-TGAAAGCAAGTAATGTATTGCTTGATAAAAATATGACTCC 1772
| ||||||||| ||||| | |||| ||||| |||||||||||||||||||||||||||||
Sbjct 1933 AAGATTATCCACAGAGA-TCTGAAGGCAAGCAATGTATTGCTTGATAAAAATATGACTCC 1991
Query 1773 GAAGATCTCGGATTTTGGGATGGCTAGGATCTTTGGACGGGAGGAGACAGAAGCTAATAC 1832
||||||||||||||||||||||||||||| |||| | |||| ||||| |||||||| ||
Sbjct 1992 AAAGATCTCGGATTTTGGGATGGCTAGGATATTTGAAAGGGACGAGACGGAAGCTAACAC 2051
Query 1833 AAGGAGGGTGGTTGGAACTTACGGCTACATGTCTCCAGAATATGCAATGGACGGGATATA 1892
|||| |||||||||||||||||||||||||||||| ||||| |||||||| |||||||
Sbjct 2052 CAGGAAGGTGGTTGGAACTTACGGCTACATGTCTCCCGAATACGCAATGGAGGGGATATT 2111
Query 1893 CTCGATGAAGTCGGATGTTTTCAGCTTTGGGGTCTTGCTTCTGGAGATTATAAGTGGCAA 1952
|||| | || ||||||||||||||||| ||||| ||| |||| |||||| | ||||| ||
Sbjct 2112 CTCGGTAAAATCGGATGTTTTCAGCTTCGGGGTTTTGGTTCTTGAGATTGTCAGTGG-AA 2170
Query 1953 A-AGAAATAAAGGATTTTACAACTCAAACCGTGATCT-TAATCTCCTCGGTTTTGTGTGG 2010
| || || | |||||| ||||||| || || | |||||| ||||| | ||||
Sbjct 2171 AGAGGAACAGAGGATTCCACAACTCCGGCCAAGA-CAATAATCTTCTCGGCTACACGTGG 2229
Query 2011 -AGGCATTGGAAGGAAGGAAAAGGGCTAGAGATTGTAGATCCGATCAACA-TAGATTCTT 2068
|| ||||||| |||||||||||||||||||| || ||| |||| || ||||||| |
Sbjct 2230 GAGA-ATTGGAAAGAAGGAAAAGGGCTAGAGATCGTCGATTCGAT-AATTGTAGATTCCT 2287
Query 2069 CGTCATCAA---C---GTTCCGGAC-ACATGAAATCTTAAGGTGTATACAAATTGGTCTC 2121
| ||||||| | ||||| || ||||||| ||||||| || ||||| ||||||||
Sbjct 2288 CATCATCAATGTCATTGTTCCA-ACCACATGAAGTCTTAAGATGCATACAGATTGGTCTT 2346
Query 2122 TTGTGTGTTCAAGAACGTGCCGAAGACAGGCCAGTGATGTCCTCGGTAATGGTGCTGCTT 2181
|| ||||||||||||||||| || ||||| ||| |||||| ||||| | | ||||
Sbjct 2347 TTATGTGTTCAAGAACGTGCAGAGGACAGACCAAAGATGTCGTCGGTGGTTTTAATGCTC 2406
Query 2182 GGAAGCGAAACCACGGCTATAACT-CAGCC-TAAACGTCCTGGTTTTTGTATTGGGAGAA 2239
|| ||||||| | || ||| || ||||| |||||| || |||| ||| | | ||||
Sbjct 2407 GGTAGCGAAAA-AGGGGAATA-CTTCAGCCCTAAACGGCCCGGTTATTGCGTCAGAAGAA 2464
Query 2240 GTCCTCTTGAG---GCTGATTCTTCGTCAAGTACACAAC 2275
|| ||||||| |||||||| || || |||||| |||
Sbjct 2465 GTTCTCTTGATACTGCTGATTCGTCATCGAGTACAAAAC 2503
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 115712256225
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5