BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg475693 Length=253 Score E Sequences producing significant alignments: (Bits) Value ATMG00120.1 | Symbols: ORF143 | hypothetical protein | chrM:320... 278 2e-74 > ATMG00120.1 | Symbols: ORF143 | hypothetical protein | chrM:32041-32472 REVERSE LENGTH=432 Length=432 Score = 278 bits (150), Expect = 2e-74 Identities = 159/163 (98%), Gaps = 1/163 (1%) Strand=Plus/Plus Query 79 GGCATCGTTCGGAAGAAATTGAATATCCCCAACCCAAGCCACAGTATTATCGCCTGGATG 138 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 163 GGCATCGTTCGGAATAAATTTAATATCCCCAACCCAAGCCACAGTATTATCGCCTGGATG 222 Query 139 GCCCTCAACTCTGGGCTTCAGCAGATCGAGTTAGCAGATTTTATCCCAACCAACACCGTG 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 223 GCCCTCAACTCTGGGCTTCAGCAGATCGAGTTAGCAGATTTTATCCCAACCAACACCGTG 282 Query 199 ACTCTTTGTGGCATGTGCATGCTTGAAGATGAAAGTGCC-AAC 240 |||||||||||| |||||||||||||||||||||||||| ||| Sbjct 283 ACTCTTTGTGGCCTGTGCATGCTTGAAGATGAAAGTGCCGAAC 325 Score = 126 bits (68), Expect = 8e-29 Identities = 70/71 (99%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 10 CAGTGTCTAATGCAAGAGATTGCCCTGTATGAACTAttttttttCTCCCTGTTGAAGACA 69 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 10 CAGTGTCTAATGCAAGAGATTGCCCTGTATGAACTCTTTTTTTTCTCCCTGTTGAAGACA 69 Query 70 GGATCGTTTGG 80 ||||||||||| Sbjct 70 GGATCGTTTGG 80 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 11511314521 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5